+D GENES KO
#
KEGG Orthology (KO) - Thermotoga maritima MSB8
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tmm00010]
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Tmari_1392 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0287 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tmari_0271 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmari_0689 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmari_0688 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmari_1783 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmari_0206 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmari_0270 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_1767 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1171 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_0880 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1768 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1172 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0402 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1882 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0280 L-arabinose-specific 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Tmari_1286 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:tmm00020]
D Tmari_0288 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D Tmari_1155 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_1767 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1171 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_0880 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1768 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1172 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0402 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1769 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmari_0403 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmari_1766 Ketoisovalerate oxidoreductase subunit VorC K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmari_0881 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmari_0537 Fumarate hydratase class I; L(+)-tartrate dehydratase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmari_0538 Fumarate hydratase class I; L(+)-tartrate dehydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:tmm00030]
D Tmari_1392 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmari_1162 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tmari_1161 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Tmari_0435 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmari_1726 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmari_0955 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_0956 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_1771 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_0293 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tmari_1084 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmari_1567 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Tmari_0962 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Tmari_0165 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tmari_1637 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tmari_0063 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmari_0440 Gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D Tmari_0064 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Tmari_1593 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tmari_0271 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0287 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tmm00040]
D Tmari_0430 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Tmari_0061 Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Tmari_0066 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Tmari_0065 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Tmari_0437 epimerase in galacturonate pathway K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D Tmari_1066 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Tmari_0281 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Tmari_1726 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmari_0274 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Tmari_0282 alternative Ribulokinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D Tmari_0113 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Tmari_1676 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Tmari_1075 putative L-rhamnose isomerase RhaI K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Tmari_1077 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Tmari_1076 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D Tmari_0305 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:tmm00051]
D Tmari_1234 Endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Tmari_0294 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tmari_0737 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmari_0770 Phosphomannomutase / Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Tmari_1037 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmari_0305 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D Tmari_1075 putative L-rhamnose isomerase RhaI K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Tmari_1077 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Tmari_1076 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0287 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tmari_0830 Tagatose-6-phosphate kinase / 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Tmari_1676 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Tmari_0271 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmari_0689 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmari_1084 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tmm00052]
D Tmari_0280 L-arabinose-specific 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Tmari_1197 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmari_1198 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmari_0898 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmari_0505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Tmari_1200 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmari_0308 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Tmari_1202 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Tmari_1199 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0287 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tmari_1420 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:tmm00053]
D Tmari_1066 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Tmari_0281 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:tmm00500]
D Tmari_1420 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Tmari_0022 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_0073 Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_1862 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Tmari_1760 Endoglucanase C307 precursor (Endo-1,4-beta-glucanase C307) (Cellulase C307) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1052 Deblocking aminopeptidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1759 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1532 Endo-1,4-beta-glucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1863 Cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D Tmari_1286 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmari_0237 Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tmari_0238 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tmari_0897 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D Tmari_1444 Glycogen branching enzyme, GH-57-type, archaeal K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Tmari_1175 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Tmari_1853 Pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D Tmari_1848 Oligo-1,6-glucosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Tmari_1659 Alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Tmari_1844 Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Tmari_0362 Glucan 1,6-alpha-glucosidase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Tmari_0389 Trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245]
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Tmari_1392 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmari_0294 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tmm00520]
D Tmari_0810 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tmari_0815 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Tmari_0294 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tmari_0814 Glucosamine-6-phosphate deaminase [isomerizing], alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_0146 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_0182 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Tmari_1638 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tmari_0105 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmari_1722 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmari_1038 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmari_0581 UDP-glucose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Tmari_0583 Myo-inositol 2-dehydrogenase like protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Tmari_0610 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D Tmari_0279 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Tmari_1197 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmari_1198 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmari_0898 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmari_0505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmari_1392 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmari_0737 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmari_0770 Phosphomannomutase / Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Tmari_1037 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmari_0570 Putative aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
D Tmari_0237 Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tmari_0238 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tmm00620]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_1767 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1171 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_0880 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1768 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1172 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0402 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0272 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmari_1136 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmari_0373 Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D Tmari_0206 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmari_1572 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Tmari_1882 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmari_1303 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tmari_0539 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tmari_0126 Pyruvate:Oxaloacetate transcarboxylase domain protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tmari_0882 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Tmari_0537 Fumarate hydratase class I; L(+)-tartrate dehydratase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmari_0538 Fumarate hydratase class I; L(+)-tartrate dehydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmari_0270 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmari_0549 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tmari_0550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tmm00630]
D Tmari_0288 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D Tmari_1408 Hydroxypyruvate reductase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_0721 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmari_0211 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmari_0212 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmari_0209 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0210 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Tmari_1593 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tmari_0063 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:tmm00640]
D Tmari_0272 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmari_1136 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmari_0373 Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_1882 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmari_1192 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Tmari_0420 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:tmm00650]
D Tmari_1762 Butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Tmari_1764 Butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Tmari_1763 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Tmari_0882 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Tmari_0718 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmari_0717 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_1767 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1171 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_0880 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1768 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1172 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0402 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0545 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmari_0546 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tmm00660]
D Tmari_0545 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmari_0546 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmari_0289 Aconitate hydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0551 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0290 Aconitate hydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0552 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0553 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tmm00562]
D Tmari_1421 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tmari_1426 Inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Tmari_1425 CTP:Inositol-1-phosphate cytidylyltransferase / Phospho-di-inositol-1-phosphate synthase K07281 ipct; 1L-myo-inositol 1-phosphate cytidylyltransferase [EC:2.7.7.74]
D Tmari_1424 Phospho-di-inositol-1-phosphate synthase K07291 dipps; CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.8.34]
D Tmari_0411 Myo-inositol 2-dehydrogenase 1 K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Tmari_0409 L-threonine 3-dehydrogenase K22231 iolM; scyllo-inosose 3-dehydrogenase [EC:1.1.1.-]
D Tmari_0410 Creatinine amidohydrolase K22232 iolN; 3-dehydro-scyllo-inosose hydrolase [EC:3.7.1.-]
D Tmari_0413 Inosose isomerase K22233 iolO; 5-keto-L-gluconate epimerase [EC:5.1.-.-]
D Tmari_0689 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tmm00190]
D Tmari_1221 NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Tmari_1222 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Tmari_1223 NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Tmari_0009 NADP-reducing hydrogenase, subunit A K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tmari_0225 NADP-reducing hydrogenase, subunit A K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tmari_0007 NADP-reducing hydrogenase, subunit C K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tmari_0226 NADP-reducing hydrogenase, subunit C K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tmari_1220 NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Tmari_1620 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tmari_1618 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tmari_1619 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tmari_1621 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tmari_1617 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tmari_1624 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tmari_1622 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tmari_1623 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tmari_0585 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tmm00710]
D Tmari_0689 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmari_0688 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmari_0271 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmari_0955 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_0956 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_1771 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_1084 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmari_1726 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmari_0293 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tmari_0270 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tmm00720]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_0270 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmari_0537 Fumarate hydratase class I; L(+)-tartrate dehydratase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmari_0538 Fumarate hydratase class I; L(+)-tartrate dehydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmari_1767 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1171 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_0880 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmari_1768 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1172 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_0402 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmari_1769 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmari_0403 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmari_1766 Ketoisovalerate oxidoreductase subunit VorC K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmari_0881 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmari_1155 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmari_1775 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tmari_1776 Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tmari_0393 Nitrite reductase probable electron transfer 4Fe-S subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tmari_1136 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmari_0373 Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D Tmari_0272 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:tmm00680]
D Tmari_0393 Nitrite reductase probable electron transfer 4Fe-S subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tmari_0721 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmari_1593 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmari_0271 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0287 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tmari_0272 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmari_1136 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Tmari_1783 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmari_0325 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmari_1381 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tmari_0798 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:tmm00910]
D Tmari_1179 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Tmari_1018 NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_1649 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmari_1224 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:tmm00920]
D Tmari_1603 3-to-5 oligoribonuclease A K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Tmari_0666 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tmari_0665 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmari_0883 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tmm00061]
D Tmari_0173 Acyl carrier protein K02078 acpP; acyl carrier protein
D Tmari_0662 Acyl carrier protein K02078 acpP; acyl carrier protein
D Tmari_0799 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmari_0803 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmari_1176 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_1732 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_0802 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmari_0801 Enoyl-[acyl-carrier-protein] reductase [FMN] K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tmm00071]
D Tmari_0755 Nitrite reductase probable [NAD(P)H] subunit K00530 nroR; rubredoxin---NAD(P)+ reductase [EC:1.18.1.4]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tmm00561]
D Tmari_1593 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tmari_0420 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D Tmari_1436 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmari_0954 Unknown pentose kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmari_0147 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tmari_1453 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1289 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1701 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmari_1711 Phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Tmari_1199 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tmm00564]
D Tmari_0376 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Tmari_1438 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Tmari_1453 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1289 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1701 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmari_1630 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Tmari_1404 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Tmari_1876 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Tmari_0283 Arabinose operon protein AraM K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tmm00600]
D Tmari_1200 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmari_1199 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tmm00230]
D Tmari_1188 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tmari_0165 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tmari_1637 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tmari_1252 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tmari_1255 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Tmari_1253 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tmari_1251 Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Tmari_1249 Phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Tmari_1250 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmari_1256 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Tmari_0444 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Tmari_0443 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Tmari_1248 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Tmari_1101 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tmari_1254 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmari_1391 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Tmari_1893 UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Tmari_1671 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmari_1604 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmari_1745 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmari_0204 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Tmari_1354 Inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tmari_0157 ham1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Tmari_1830 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmari_1697 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Tmari_0116 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmari_0383 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tmari_0730 GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tmari_0193 guanosine pentaphosphate phosphohydrolase, putative K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Tmari_1102 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tmari_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tmari_0033 Hypothetical ATP-binding protein, containing DUF265 domain K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Tmari_0915 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:tmm00240]
D Tmari_0554 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmari_0555 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmari_1651 Aspartate carbamoyltransferase / Aspartate carbamoyltransferase regulatory chain (PyrI) K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D Tmari_0333 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Tmari_0331 Dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Tmari_0332 Dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Tmari_0329 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Tmari_0330 Orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Tmari_1612 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Tmari_0915 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Tmari_1564 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Tmari_0804 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Tmari_1449 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Tmari_0752 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Tmari_1893 UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Tmari_1671 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmari_0722 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tmari_1471 Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Tmari_1662 Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Tmari_0848 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Tmari_0383 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tmari_0116 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmari_0401 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tmari_1105 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Tmari_0398 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Tmari_0446 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tmm00250]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_0441 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Tmari_1789 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmari_1790 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmari_1102 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tmari_1101 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tmari_1651 Aspartate carbamoyltransferase / Aspartate carbamoyltransferase regulatory chain (PyrI) K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D Tmari_1649 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmari_1224 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmari_1018 NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_0554 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmari_0555 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmari_1250 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmari_0814 Glucosamine-6-phosphate deaminase [isomerizing], alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_0146 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_1252 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tmm00260]
D Tmari_1526 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmari_0544 Homoserine dehydrogenase / Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Tmari_1531 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmari_0542 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Tmari_0543 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tmari_1752 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Tmari_0721 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmari_1408 Hydroxypyruvate reductase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D Tmari_1593 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tmari_1783 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmari_0325 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmari_1381 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tmari_1407 Serine--glyoxylate aminotransferase K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51]
D Tmari_0211 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmari_0212 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmari_0209 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0210 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Tmari_0354 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Tmari_0135 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tmari_0136 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tmari_0536 Tryptophan synthase beta chain like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tmm00270]
D Tmari_0666 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tmari_0665 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmari_0266 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmari_1293 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Tmari_1667 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tmari_0655 S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tmari_0654 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tmari_1135 5-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Tmari_0938 S-adenosylhomocysteine deaminase; Methylthioadenosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Tmari_0913 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Tmari_0515 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Tmari_0170 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tmari_1526 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmari_0544 Homoserine dehydrogenase / Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Tmari_1531 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmari_0883 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Tmari_0884 O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Tmari_0833 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1882 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmari_0223 pyridoxal phosphate-dependent deaminase, putative K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Tmari_0325 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:tmm00280]
D Tmari_0833 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tmm00290]
D Tmari_0354 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Tmari_0289 Aconitate hydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0551 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0290 Aconitate hydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0552 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmari_0553 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Tmari_0545 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmari_0546 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmari_0547 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tmari_0548 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tmari_0833 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmari_0549 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tmari_0550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tmm00300]
D Tmari_1526 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmari_0544 Homoserine dehydrogenase / Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Tmari_1531 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmari_1529 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tmari_1528 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Tmari_1794 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tmari_1675 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tmari_1530 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tmari_1525 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tmari_1527 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D Tmari_1524 N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D Tmari_1137 Aspartate aminotransferase (AspB-4) K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Tmari_0235 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmari_0234 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:tmm00220]
D Tmari_1103 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Tmari_1789 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmari_1790 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmari_1250 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_0554 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmari_0555 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmari_1018 NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1792 Glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Tmari_1793 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Tmari_1791 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Tmari_1794 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tmm00330]
D Tmari_1888 Ornithine decarboxylase / Arginine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Tmari_0654 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tmari_0655 S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tmari_0117 acetamidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Tmari_0576 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Tmari_0292 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tmari_0291 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:tmm00340]
D Tmari_1046 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Tmari_1039 Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Tmari_1041 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Tmari_1042 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Tmari_1040 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Tmari_1043 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmari_0805 Histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Tmari_1045 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Tmari_0845 Glutamate formiminotransferase / Glutamate formyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:tmm00350]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:tmm00360]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmari_0117 acetamidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:tmm00380]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0117 acetamidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tmm00400]
D Tmari_0341 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tmari_0346 Shikimate kinase I / 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D Tmari_0347 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Tmari_0343 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Tmari_0345 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Tmari_0140 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tmari_0139 Anthranilate synthase, amidotransferase component / Anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D Tmari_0137 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Tmari_0138 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Tmari_0135 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tmari_0136 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tmari_0536 Tryptophan synthase beta chain like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tmari_0152 Chorismate mutase I / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Tmari_0342 Prephenate and/or arogenate dehydrogenase (unknown specificity) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tmm00410]
D Tmari_0941 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Tmari_1081 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:tmm00430]
D Tmari_1136 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmari_0373 Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D Tmari_0272 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tmm00450]
D Tmari_0266 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmari_1293 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Tmari_1378 Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Tmari_0871 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tmari_0132 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tmari_1089 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tmm00460]
D Tmari_0022 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_0073 Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_1862 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Tmari_0721 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tmm00470]
D Tmari_0257 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmari_1250 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmari_0232 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmari_0003 Muconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Tmari_0223 pyridoxal phosphate-dependent deaminase, putative K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Tmari_1530 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tmari_1525 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tmari_1605 Putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:tmm00480]
D Tmari_1155 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmari_0435 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmari_1162 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tmari_1888 Ornithine decarboxylase / Arginine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Tmari_0654 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tmm00511]
D Tmari_1200 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmari_1866 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmari_1238 hypothetical protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmari_1633 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D Tmari_0304 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tmm00542]
D Tmari_1557 methicillin resistance protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0806 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tmm00541]
D Tmari_0505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmari_0864 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Tmari_0737 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmari_0770 Phosphomannomutase / Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Tmari_1037 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmari_0570 Putative aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
D Tmari_1638 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tmari_1038 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmari_0581 UDP-glucose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Tmari_0583 Myo-inositol 2-dehydrogenase like protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Tmari_0610 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:tmm00550]
D Tmari_0105 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmari_1722 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmari_0229 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tmari_0232 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmari_0235 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmari_0257 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmari_0234 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tmari_1405 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tmari_0895 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmari_0233 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmari_0230 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tmari_0888 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmari_0589 Cell division protein FtsI [Peptidoglycan synthetase] K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmari_0872 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:tmm00552]
D Tmari_0895 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmari_1557 methicillin resistance protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0806 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0819 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tmari_1711 Phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tmm00543]
D Tmari_1557 methicillin resistance protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0806 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0666 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tmm00730]
D Tmari_0789 Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Tmari_0791 Phosphomethylpyrimidine kinase / Thiamin-phosphate synthase ThiN K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D Tmari_1700 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmari_1702 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Tmari_1272 Thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Tmari_1779 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tmari_0788 Thiazole biosynthetic enzyme Thi4 / Ribose 1,5-bisphosphate or 5-ribose-1,2-cyclic phosphate dehydrogenase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D Tmari_0033 Hypothetical ATP-binding protein, containing DUF265 domain K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Tmari_1725 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tmari_0153 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Tmari_0890 Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Tmari_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tmm00740]
D Tmari_1836 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tmari_1838 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tmari_1835 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Tmari_1837 Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Tmari_0859 Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Tmari_1188 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:tmm00750]
D Tmari_0543 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tmari_0470 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Tmari_0469 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tmm00760]
D Tmari_1652 L-Aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D Tmari_1653 Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Tmari_1654 Quinolinate phosphoribosyltransferase [decarboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Tmari_0471 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Tmari_1604 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmari_1745 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmari_1893 UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Tmari_1671 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmari_0094 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Tmari_0915 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Tmari_0645 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Tmari_1258 NAD synthetase / Glutamine amidotransferase chain of NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Tmari_0472 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Tmari_0487 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Tmari_1741 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:tmm00770]
D Tmari_0545 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmari_0546 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmari_0547 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tmari_0548 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tmari_1736 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Tmari_1081 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Tmari_0885 Pantothenate kinase type III, CoaX-like protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Tmari_1695 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Tmari_0915 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Tmari_0742 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Tmari_1394 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Tmari_0692 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Tmari_0833 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmari_0941 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tmm00780]
D Tmari_0803 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmari_1176 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_1732 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_0802 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmari_1274 Biotin synthase-related enzyme K01012 bioB; biotin synthase [EC:2.8.1.6]
D Tmari_0222 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tmm00785]
D Tmari_0708 Lipoate-protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Tmari_1892 Elongator protein 3/MiaB/NifB K09711 lipS1; lipoyl synthase
D Tmari_0241 Biotin synthase-related protein, radical SAM superfamily K24689 lipS2; lipoyl synthase
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_0211 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmari_0212 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmari_0209 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmari_0210 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tmm00790]
D Tmari_0036 GTP cyclohydrolase I type 2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Tmari_0153 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Tmari_0038 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Tmari_0037 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Tmari_1650 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Tmari_0164 Dihydrofolate synthase / Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Tmari_1836 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tmari_0035 Folate biosynthesis protein PTPS-III, catalyzes a reaction that bypasses dihydroneopterin aldolase (FolB) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tmari_0792 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tmari_1687 Metal-dependent hydrolases of the beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:tmm00670]
D Tmari_1650 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Tmari_1775 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tmari_1776 Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tmari_0721 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmari_1253 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tmari_1254 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmari_0845 Glutamate formiminotransferase / Glutamate formyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Tmari_0525 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tmari_0209 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmari_0266 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmari_0446 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Tmari_1568 Formiminotetrahydrofolate cyclodeaminase K01746 E4.3.1.4; formiminotetrahydrofolate cyclodeaminase [EC:4.3.1.4]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tmm00860]
D Tmari_1890 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmari_1472 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Tmari_1066 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tmm00130]
D Tmari_0754 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Tmari_1536 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tmm00900]
D Tmari_1779 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tmari_0891 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Tmari_1400 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Tmari_1390 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Tmari_0647 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Tmari_0893 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Tmari_1450 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Tmari_0159 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tmari_1543 Chain A of octaprenyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Tmari_1405 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
D Tmari_1287 4,4-diaponeurosporenoate glycosyltransferase K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Tmari_0955 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_0956 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmari_1771 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D Tmari_0864 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tmm00946]
D Tmari_0022 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_0073 Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_1862 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Tmari_0074 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:tmm00332]
D Tmari_0292 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tmari_0291 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tmm00261]
D Tmari_1526 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmari_0544 Homoserine dehydrogenase / Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Tmari_1531 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmari_1529 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tmari_1528 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tmm00521]
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Tmari_1426 Inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Tmari_1421 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tmari_0411 Myo-inositol 2-dehydrogenase 1 K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Tmari_0864 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Tmari_1477 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D Tmari_0864 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:tmm00401]
D Tmari_0342 Prephenate and/or arogenate dehydrogenase (unknown specificity) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Tmari_0140 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Tmari_0799 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmari_1176 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_1732 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Tmari_0173 Acyl carrier protein K02078 acpP; acyl carrier protein
D Tmari_0662 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tmm00999]
D Tmari_1667 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tmari_0022 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_0073 Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmari_1862 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D Tmari_1605 Putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D Tmari_0882 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Tmari_0718 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmari_0717 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation [PATH:tmm00627]
D Tmari_0117 acetamidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Tmari_1572 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tmm00625]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:tmm00633]
D Tmari_0393 Nitrite reductase probable electron transfer 4Fe-S subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tmari_0014 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Tmari_0015 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Tmari_0012 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Tmari_0013 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tmm00643]
D Tmari_0117 acetamidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:tmm00626]
D Tmari_0108 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Tmari_0922 alcohol dehydrogenase, iron-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tmm03020]
D Tmari_0455 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tmari_0456 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tmari_1480 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmari_1696 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tmm03010]
D Tmari_1451 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D Tmari_0763 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D Tmari_1502 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D Tmari_1481 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D Tmari_1491 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D Tmari_0603 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D Tmari_1512 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D Tmari_1494 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D Tmari_1459 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D Tmari_1509 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D Tmari_1482 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D Tmari_1513 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D Tmari_1483 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D Tmari_1495 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D Tmari_1351 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D Tmari_1574 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D Tmari_1499 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D Tmari_0605 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D Tmari_1504 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D Tmari_1666 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D Tmari_0452 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D Tmari_1505 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D Tmari_1508 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D Tmari_1507 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D Tmari_1496 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D Tmari_1493 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D Tmari_0454 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tmari_0865 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D Tmari_0453 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D Tmari_0451 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D Tmari_1460 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D Tmari_1498 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D Tmari_1489 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D Tmari_1501 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D Tmari_1479 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D Tmari_1492 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D Tmari_1579 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D Tmari_1600 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D Tmari_1464 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D Tmari_1503 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D Tmari_1506 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D Tmari_1497 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D Tmari_1636 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D Tmari_1462 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D Tmari_0253 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D Tmari_1500 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D Tmari_1490 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D Tmari_1692 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Tmari_0148 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D Tmari_0448 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D Tmari_1470 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D Tmari_1599 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D Tmari_1484 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tmari_R0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmari_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmari_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tmm00970]
D Tmari_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0041 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmari_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmari_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tmari_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmari_R0034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmari_R0061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmari_R0065 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmari_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0011 tRNA-His K14226 tRNA-His; tRNA His
D Tmari_R0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmari_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmari_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmari_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmari_R0003 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0062 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0027 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0064 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tmari_R0024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmari_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_1890 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmari_1358 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmari_1277 Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tmari_1278 Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tmari_0250 Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tmari_1403 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_1734 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_1447 Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmari_0214 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tmari_0215 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tmari_0741 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmari_1386 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmari_0720 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmari_1417 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Tmari_1089 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmari_0525 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tmari_1827 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmari_0166 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmari_1368 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmari_1713 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmari_1098 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmari_0510 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmari_1095 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_1047 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_0822 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmari_0823 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmari_0475 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmari_0489 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tmm03060]
D Tmari_1488 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D Tmari_0449 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Tmari_0476 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Tmari_0862 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmari_0863 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmari_0861 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Tmari_1467 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmari_1586 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmari_1573 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmari_R0039 SRP_bact K01983 ffs; SRP RNA
D Tmari_R0040 SRP_euk_arch K01983 ffs; SRP RNA
D Tmari_0568 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D Tmari_1580 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tmari_0460 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tmm04122]
D Tmari_1700 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmari_0516 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tmari_1702 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tmm03018]
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmari_1352 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tmari_0723 3-to-5 exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmari_1478 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tmari_1872 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tmari_0663 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0371 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmari_0502 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmari_0523 RNA-binding protein Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tmm03030]
D Tmari_0493 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tmari_0458 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmari_0574 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmari_0772 DNA polymerase III, gamma subunit-related protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0686 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0179 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmari_0260 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmari_1744 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tmari_1458 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_0917 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tmm03410]
D Tmari_0364 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tmari_0507 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tmari_0360 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_1554 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tmm03420]
D Tmari_1456 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tmari_0477 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Tmari_1770 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Tmari_0263 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Tmari_1244 ATP-dependent DNA helicase UvrD/PcrA/Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tmm03430]
D Tmari_1727 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tmari_1283 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Tmari_0019 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Tmari_1244 ATP-dependent DNA helicase UvrD/PcrA/Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmari_1777 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tmari_1778 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tmari_1554 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_0458 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmari_0574 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmari_0260 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmari_0772 DNA polymerase III, gamma subunit-related protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0686 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0179 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmari_0493 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tmm03440]
D Tmari_1554 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_1874 RecA protein K03553 recA; recombination protein RecA
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_0163 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tmari_1738 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tmari_0573 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tmari_0203 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tmari_0458 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmari_0574 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmari_0260 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmari_0772 DNA polymerase III, gamma subunit-related protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0686 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0179 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmari_0493 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tmari_0176 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tmm02010]
D Tmari_1382 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Tmari_1385 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D Tmari_1384 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D Tmari_1383 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Tmari_1847 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_1211 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_1846 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D Tmari_1210 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D Tmari_1845 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D Tmari_1209 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D Tmari_1281 Maltose/maltodextrin transport ATP-binding protein MalK; Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmari_1239 sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmari_0429 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Tmari_0428 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Tmari_0427 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Tmari_1861 putative beta-glucosides ABC transporter, substrate binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Tmari_1860 putative beta-glucosides ABC transporter, permease protein 1 K10237 thuF; trehalose/maltose transport system permease protein
D Tmari_1859 putative beta-glucosides ABC transporter, permease protein 2 K10238 thuG; trehalose/maltose transport system permease protein
D Tmari_0811 Chitobiose ABC transport system, sugar-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D Tmari_0812 Chitobiose ABC transport system, permease protein 1 K17245 chiF; putative chitobiose transport system permease protein
D Tmari_0813 Chitobiose ABC transport system, permease protein 2 K17246 chiG; putative chitobiose transport system permease protein
D Tmari_0099 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Tmari_0101 Sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D Tmari_0102 Sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D Tmari_0100 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Tmari_0111 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0960 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_1858 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0109 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Tmari_0957 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D Tmari_1857 putative beta-xyloside ABC transporter, permease component K10440 rbsC; ribose transport system permease protein
D Tmari_0112 D-xylose transport ATP-binding protein XylG K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_0958 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_1856 putative beta-xyloside ABC transporter, ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_0961 Ribose ABC transport system, high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D Tmari_0415 myo-inositol ABC transporter, periplasmic sugar-binding protein InoE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Tmari_0416 myo-inositol ABC transporter, permease protein InoF K17238 inoF; inositol-phosphate transport system permease protein
D Tmari_0417 myo-inositol ABC transporter, permease protein InoG K17239 inoG; inositol-phosphate transport system permease protein
D Tmari_0418 myo-inositol ABC transporter, ATP-binding protein InoL K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Tmari_1126 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Tmari_1127 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Tmari_1128 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Tmari_1269 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tmari_1268 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D Tmari_1267 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D Tmari_1266 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tmari_0592 Amino acid ABC transporter, periplasmic amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Tmari_0591 Amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D Tmari_0590 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Tmari_1141 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmari_1142 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D Tmari_1143 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D Tmari_1144 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmari_1145 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmari_1754 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D Tmari_1755 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D Tmari_1756 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D Tmari_1757 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D Tmari_1758 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D Tmari_0121 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D Tmari_0123 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D Tmari_0122 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tmari_0800 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D Tmari_1883 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D Tmari_1672 ATPase component of general energizing module of ECF transporters K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmari_0220 ATPase component of general energizing module of ECF transporters K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmari_1058 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Tmari_1261 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0040 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0285 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0286 Lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
D Tmari_0830 Tagatose-6-phosphate kinase / 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:tmm03070]
D Tmari_0862 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmari_0863 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmari_0449 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Tmari_0476 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Tmari_1488 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D Tmari_0861 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Tmari_1467 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmari_1586 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmari_0568 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D Tmari_1573 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tmm02020]
D Tmari_1663 Sensor histidine kinase HpkA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmari_0153 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Tmari_1269 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tmari_0569 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmari_0130 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_0759 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_0904 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D Tmari_0676 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D Tmari_0928 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmari_0539 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tmari_0249 Carbon storage regulator K03563 csrA; carbon storage regulator
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_0461 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmari_1434 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0020 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1149 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1153 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0426 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0701 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_0719 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_0702 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmari_0700 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmari_0405 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmari_0320 TRAP transporter solute receptor, unknown substrate 8 K11688 dctP; C4-dicarboxylate-binding protein DctP
D Tmari_0639 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Tmari_1038 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmari_1760 Endoglucanase C307 precursor (Endo-1,4-beta-glucanase C307) (Cellulase C307) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1052 Deblocking aminopeptidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1759 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_1532 Endo-1,4-beta-glucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Tmari_0082 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Tmari_1888 Ornithine decarboxylase / Arginine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tmm02024]
D Tmari_0523 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Tmari_0140 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tmari_1141 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmari_1142 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D Tmari_1143 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D Tmari_1144 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmari_1145 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmari_0430 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Tmari_1838 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tmari_1754 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D Tmari_1755 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D Tmari_1756 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D Tmari_1757 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D Tmari_1758 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D Tmari_0298 Xyloglucan ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0457 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0307 Xylose-regulated ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1157 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0028 Beta-glucoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0528 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1206 Xyloglucan ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1230 Mannoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1233 Mannoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0053 Xylose-regulated ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1071 putative rhamnose ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0068 Xylobiose ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0299 Xyloglucan ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1156 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0027 Beta-glucoside ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0500 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0529 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1205 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1229 Mannoside ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0057 Xylose-regulated ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1070 putative rhamnose ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0069 Xylobiose ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0300 Xyloglucan ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1160 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0026 Beta-glucoside ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0499 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0530 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1204 Xylobiose ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1228 Mannoside ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0056 Xylose-regulated ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1069 putative rhamnose ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0070 Xylobiose ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0495 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1201 Xylobiose ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1159 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0301 Xyloglucan ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0055 Xylose-regulated ABC transporter, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0025 Beta-glucoside ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0071 Xylobiose ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1068 putative rhamnose ABC transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0498 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1227 Mannoside ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1067 putative rhamnose ABC transporter, ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0072 Xylobiose ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0054 Xylose-regulated ABC transporter, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1203 Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0024 Beta-glucoside ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1226 Mannoside ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0497 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0527 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0302 Xyloglucan ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1158 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1467 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmari_0449 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Tmari_0476 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Tmari_1488 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D Tmari_0861 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Tmari_1586 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmari_0568 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D Tmari_1573 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tmm02030]
D Tmari_1434 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0020 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1149 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1153 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0426 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1847 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_1211 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_0111 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0960 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_1858 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0702 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmari_0701 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_0719 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_0700 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmari_0906 Chemotaxis protein CheC --inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tmari_1627 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D Tmari_0405 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmari_0905 Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tmari_0461 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmari_0218 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmari_0679 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmari_0680 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tmari_0676 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D Tmari_0677 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tmm02040]
D Tmari_1373 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tmari_0219 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmari_0218 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmari_0217 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tmari_0216 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmari_0508 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Tmari_0678 flagellar protein, putative K02415 fliL; flagellar protein FliL
D Tmari_0679 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmari_0680 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tmari_0699 Flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D Tmari_0698 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmari_0697 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmari_0912 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmari_0910 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmari_0911 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmari_1549 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Tmari_1371 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tmari_1372 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tmari_0673 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tmari_0674 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tmari_1551 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tmari_1550 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tmari_1548 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D Tmari_1547 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D Tmari_0634 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tmari_0080 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Tmari_0079 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tmari_0130 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_0759 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_1129 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D Tmari_1186 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tmari_0676 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D Tmari_0677 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D Tmari_0082 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tmari_1457 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Tmari_0904 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Tmari_0266 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tmm01501]
D Tmari_0810 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tmari_1754 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D Tmari_1755 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D Tmari_1756 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D Tmari_1757 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D Tmari_1758 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D Tmari_0888 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmari_0589 Cell division protein FtsI [Peptidoglycan synthetase] K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmari_0872 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tmm01502]
D Tmari_0257 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmari_0234 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tmari_0233 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmari_0230 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D Tmari_0569 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tmm01000]
C 01001 Protein kinases [BR:tmm01001]
D Tmari_0734 Serine-protein kinase rsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Tmari_0644 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Tmari_1663 Sensor histidine kinase HpkA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmari_0125 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_0855 Osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_1263 Phosphate regulon sensor protein PhoR (SphS) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_0702 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tmm01009]
D Tmari_0170 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:tmm01002]
D Tmari_0460 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Tmari_1704 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmari_1830 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmari_1252 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tmari_0814 Glucosamine-6-phosphate deaminase [isomerizing], alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_0146 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmari_1104 hypothetical protein K07052 K07052; CAAX protease family protein
D Tmari_1537 hypothetical protein K07052 K07052; CAAX protease family protein
D Tmari_0965 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Tmari_0127 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D Tmari_1675 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tmari_1524 N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D Tmari_1486 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Tmari_0039 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Tmari_0578 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmari_0892 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Tmari_0569 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmari_0695 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Tmari_1642 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tmari_1086 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tmari_1580 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tmari_0748 Peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Tmari_1091 hypothetical protein K07059 K07059; rhomboid family protein
D Tmari_0517 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Tmari_0728 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D Tmari_0727 TldD protein, part of proposed TldE/TldD proteolytic complex K03568 tldD; TldD protein
D Tmari_0987 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D Tmari_1833 HflC protein K04087 hflC; modulator of FtsH protease HflC
D Tmari_1832 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tmm01003]
D Tmari_0897 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D Tmari_0888 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmari_1412 Glycosyl transferase, group 1 family protein K21011 pelF; polysaccharide biosynthesis protein PelF
D Tmari_0819 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tmari_1557 methicillin resistance protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0806 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_1237 glycosyl transferase group 1, by Blast K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tmm01005]
D Tmari_1557 methicillin resistance protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmari_0806 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tmm01011]
D Tmari_0105 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmari_1722 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmari_0229 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tmari_0232 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmari_0235 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmari_0257 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmari_0233 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmari_0230 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tmari_0895 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmari_0083 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D Tmari_0888 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmari_0589 Cell division protein FtsI [Peptidoglycan synthetase] K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmari_0872 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Tmari_0923 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:tmm01004]
D Tmari_0799 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmari_0803 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmari_1176 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_1732 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmari_0802 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmari_0801 Enoyl-[acyl-carrier-protein] reductase [FMN] K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Tmari_0147 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tmari_1453 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1289 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmari_1701 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tmm01008]
C 01006 Prenyltransferases [BR:tmm01006]
D Tmari_0159 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tmari_1543 Chain A of octaprenyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Tmari_1405 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tmari_0522 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tmari_1536 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:tmm01007]
D Tmari_1890 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmari_1358 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmari_0475 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmari_0489 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tmari_0720 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmari_1098 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmari_1089 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmari_1368 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmari_1827 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmari_0166 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmari_1713 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmari_1447 Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmari_1095 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_1047 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_0214 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tmari_0215 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tmari_1386 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmari_0510 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmari_0741 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmari_1403 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_1734 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_0822 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmari_0823 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmari_1417 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Tmari_1706 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1260 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmari_1044 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmari_1794 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tmari_0833 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmari_0570 Putative aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tmm00194]
D Tmari_1617 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tmari_1618 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tmari_1619 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tmari_1620 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tmari_1621 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tmari_1622 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tmari_1623 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tmari_1624 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tmari_1626 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tmm03000]
D Tmari_1073 Transcriptional regulator of rhamnose utilization, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D Tmari_1871 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmari_0297 putative xyloglucan oligosaccharides-responsive regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmari_1207 Maltose operon transcriptional repressor MalR, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmari_1225 putative regulator of mannoside utilization, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmari_0951 Ribose operon repressor K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Tmari_0273 Transcriptional repressor of the arabinose operon K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D Tmari_1034 Transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Tmari_0120 Zinc uptake regulation protein ZUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Tmari_1786 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Tmari_1523 Peroxide stress regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Tmari_1178 Hcp transcriptional regulator HcpR (Crp/Fnr family) K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Tmari_1183 transcriptional regulator, metal-sensing K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Tmari_0939 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Tmari_0602 iron-dependent transcriptional repressor, putative K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Tmari_1235 putative regulator for cell wall polysaccharide synthesis gene cluster, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Tmari_0222 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Tmari_1433 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor
D Tmari_0167 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor
D Tmari_1437 Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D Tmari_1442 Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D Tmari_0369 Arginine pathway regulatory protein ArgR, repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D Tmari_0853 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Tmari_1163 hypothetical protein K03973 pspC; phage shock protein C
D Tmari_1715 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:tmm03021]
D Tmari_1480 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmari_0455 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tmari_0456 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tmari_1696 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tmari_1457 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Tmari_1606 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tmari_0531 RNA polymerase sporulation specific sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D Tmari_0904 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D Tmari_1787 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tmari_1774 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D Tmari_0450 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Tmari_0464 Serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Tmari_1448 anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV K04749 rsbV; anti-sigma B factor antagonist
D Tmari_0734 Serine-protein kinase rsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Tmari_1363 Sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Tmari_1714 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Tmari_1478 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tmm03019]
D Tmari_1614 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tmari_1108 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmari_0663 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tmari_1872 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tmari_0723 3-to-5 exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmari_0255 CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmari_1352 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tmari_1478 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tmari_0207 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmari_0371 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmari_0502 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmari_0523 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Tmari_0249 Carbon storage regulator K03563 csrA; carbon storage regulator
D Tmari_1718 Hypothetical ATP-binding protein UPF0042, contains P-loop K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tmm03011]
D Tmari_1451 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D Tmari_0763 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D Tmari_1502 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D Tmari_1481 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D Tmari_1491 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D Tmari_0603 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D Tmari_1512 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D Tmari_1494 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D Tmari_1459 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D Tmari_1509 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D Tmari_1482 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D Tmari_1513 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D Tmari_1483 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D Tmari_1495 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D Tmari_1351 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D Tmari_1574 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D Tmari_1499 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D Tmari_0605 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D Tmari_1504 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D Tmari_1666 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D Tmari_0452 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D Tmari_1505 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D Tmari_1508 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D Tmari_1507 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D Tmari_1496 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D Tmari_1493 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D Tmari_0865 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D Tmari_0453 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D Tmari_0451 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D Tmari_0454 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tmari_1460 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D Tmari_1498 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D Tmari_1489 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D Tmari_1501 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D Tmari_1479 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D Tmari_1492 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D Tmari_1579 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D Tmari_1600 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D Tmari_1464 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D Tmari_1503 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D Tmari_1506 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D Tmari_1497 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D Tmari_1462 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D Tmari_0253 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D Tmari_1500 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D Tmari_1490 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D Tmari_1692 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Tmari_0148 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D Tmari_0448 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D Tmari_1470 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D Tmari_1599 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D Tmari_1484 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tmari_1636 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D Tmari_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmari_R0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmari_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tmm03009]
D Tmari_1108 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmari_0849 GTP-binding protein Era K03595 era; GTPase
D Tmari_0095 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D Tmari_1787 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tmari_1774 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D Tmari_0450 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Tmari_0262 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Tmari_1443 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Tmari_1520 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Tmari_1673 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Tmari_1387 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Tmari_0707 rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tmari_0874 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Tmari_0709 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Tmari_0521 Protein-L-isoD(D-D) O-methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Tmari_1584 RNA binding methyltransferase FtsJ like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Tmari_1749 TrmH family tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Tmari_0846 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Tmari_1705 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Tmari_0134 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Tmari_1723 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Tmari_1099 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Tmari_0942 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Tmari_0459 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Tmari_1546 hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D Tmari_1576 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Tmari_1877 Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Tmari_1083 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Tmari_1614 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tmari_1553 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Tmari_1748 Ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D Tmari_1725 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tmari_1452 GTP-binding protein EngA K03977 engA; GTPase
D Tmari_0769 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D Tmari_0524 GTP-binding protein HflX K03665 hflX; GTPase
D Tmari_0850 GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit K06948 yqeH; 30S ribosome assembly GTPase
D Tmari_0854 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tmari_0730 GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tmari_0857 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Tmari_1788 transcription termination protein NusA-like protein K09748 rimP; ribosome maturation factor RimP
D Tmari_0145 Iojap protein K09710 ybeB; ribosome-associated protein
D Tmari_1517 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D Tmari_1615 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D Tmari_1246 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Tmari_0149 ribosomal protein L32p-like protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tmm03016]
D Tmari_0866 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Tmari_0715 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Tmari_1364 Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Tmari_1087 Archease K24956 ZBTB8OS; protein archease
D Tmari_1890 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmari_0510 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmari_1368 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmari_0166 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmari_1089 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmari_1098 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmari_1713 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmari_1447 Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmari_1403 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_1734 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmari_0741 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmari_1386 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmari_0720 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmari_1827 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmari_1095 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_1047 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmari_0822 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmari_0823 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmari_0475 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmari_0489 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tmari_0731 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Tmari_0749 tRNA (adenine57/58-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Tmari_0927 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Tmari_1582 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Tmari_0858 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Tmari_1700 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmari_0854 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tmari_0522 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tmari_0265 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Tmari_0261 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tmari_1469 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Tmari_R0033 bacterial RNase P class A K01978 rnpB; M1 RNA
D Tmari_1875 2-5 RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Tmari_0214 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tmari_0215 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tmari_1417 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Tmari_1358 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmari_0093 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Tmari_0653 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Tmari_0832 MiaB family protein, possibly involved in tRNA or rRNA modification K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Tmari_0735 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Tmari_1577 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Tmari_0516 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tmari_0195 tRNA(U54)-2-thioribothymidine synthetase K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Tmari_0572 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Tmari_0035 Folate biosynthesis protein PTPS-III, catalyzes a reaction that bypasses dihydroneopterin aldolase (FolB) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tmari_0792 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tmari_0732 Protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Tmari_1569 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Tmari_1702 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Tmari_0577 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Tmari_0876 Putative molecular chaperone, inactive metal-dependent protease like protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Tmari_0143 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Tmari_1641 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Tmari_1521 UPF0348 protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D Tmari_0723 3-to-5 exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmari_1352 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tmm03012]
D Tmari_0776 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D Tmari_1598 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D Tmari_1613 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tmari_1510 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmari_1660 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D Tmari_1511 Translation elongation factor G K02355 fusA; elongation factor G
D Tmari_1370 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Tmari_1406 Ribosome recycling factor K02838 frr; ribosome recycling factor
D Tmari_0485 Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Tmari_1635 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Tmari_1485 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D Tmari_1772 Translation elongation factor P K02356 efp; elongation factor P
D Tmari_1587 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tmm03110]
D Tmari_1398 ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Tmari_0196 ATP-dependent Clp protease ATP-binding subunit ClpA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Tmari_0875 ClpB protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Tmari_0144 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Tmari_0518 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Tmari_0371 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmari_0502 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmari_0851 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tmari_1401 Chaperonin (heat shock protein 33) K04083 hslO; molecular chaperone Hsp33
D Tmari_0852 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tmari_0372 Small heat shock protein K13993 HSP20; HSP20 family protein
D Tmari_0501 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D Tmari_0569 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmari_0578 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmari_1624 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tmari_1035 Glutaredoxin-related protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:tmm04131]
D Tmari_1866 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmari_1238 hypothetical protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmari_0688 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmari_0206 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tmm03032]
D Tmari_0264 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D Tmari_0928 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmari_1744 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tmari_1458 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_0458 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmari_0574 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmari_0260 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmari_0179 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmari_0493 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tmari_0772 DNA polymerase III, gamma subunit-related protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0686 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0917 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tmari_1088 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tmari_0835 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tmari_0256 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tmari_0171 DNA reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:tmm03036]
D Tmari_1108 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmari_0264 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D Tmari_0928 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmari_0523 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Tmari_1189 Chromosome partition protein smc K03529 smc; chromosome segregation protein
D Tmari_0490 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D Tmari_0491 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Tmari_0837 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tmari_0872 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Tmari_0231 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tmari_0838 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmari_1051 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tmari_1885 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tmari_0586 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_1552 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_0841 Cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D Tmari_0261 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tmari_0707 rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tmari_0735 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Tmari_1601 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tmari_1473 GTP-binding protein EngB K03978 engB; GTP-binding protein
D Tmari_1716 Cytoplasmic hypothetical protein DUF199, a subgroup K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tmm03400]
D Tmari_0889 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Tmari_0364 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tmari_0507 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tmari_0360 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tmari_1880 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Tmari_1554 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmari_0097 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tmari_1628 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tmari_0477 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Tmari_1770 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Tmari_0263 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Tmari_1244 ATP-dependent DNA helicase UvrD/PcrA/Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmari_0455 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tmari_0456 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tmari_1480 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmari_1696 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tmari_1456 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tmari_1727 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tmari_1283 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Tmari_0019 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Tmari_1777 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tmari_1778 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tmari_0458 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmari_0574 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmari_0260 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmari_0179 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmari_0493 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tmari_0772 DNA polymerase III, gamma subunit-related protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0686 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_1874 RecA protein K03553 recA; recombination protein RecA
D Tmari_0163 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tmari_1738 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tmari_0573 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tmari_0176 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Tmari_1645 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D Tmari_1644 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D Tmari_0197 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Tmari_0203 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tmari_1807 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmari_1088 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tmari_0835 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tmari_0256 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tmari_0264 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D Tmari_1086 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tmari_1873 Regulatory protein RecX K03565 recX; regulatory protein
D Tmari_0116 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmari_1603 3-to-5 oligoribonuclease A K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tmm03029]
D Tmari_0776 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D Tmari_1598 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D Tmari_1613 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tmari_1510 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmari_1660 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D Tmari_1511 Translation elongation factor G K02355 fusA; elongation factor G
D Tmari_0849 GTP-binding protein Era K03595 era; GTPase
D Tmari_0475 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmari_0166 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmari_1447 Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmari_1098 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmari_1277 Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tmari_1278 Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tmari_0250 Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tmari_0604 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Tmari_0371 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmari_0852 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tmari_0502 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmari_0501 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D Tmari_0851 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tmari_1700 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmari_1601 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tmari_1467 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tmm02000]
D Tmari_1261 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0040 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0285 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_0286 Lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmari_1326 Phospholipid-lipopolysaccharide ABC transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Tmari_1316 hypothetical protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Tmari_1335 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Tmari_1382 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Tmari_1385 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D Tmari_1384 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D Tmari_1383 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Tmari_0200 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Tmari_0481 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Tmari_0201 Hydroxymethylpyrimidine ABC transporter, transmembrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Tmari_0480 Hydroxymethylpyrimidine ABC transporter, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Tmari_0202 Alkanesulfonates ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Tmari_1847 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_1211 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D Tmari_1846 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D Tmari_1210 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D Tmari_1845 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D Tmari_1209 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D Tmari_1281 Maltose/maltodextrin transport ATP-binding protein MalK; Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmari_1239 sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmari_1861 putative beta-glucosides ABC transporter, substrate binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Tmari_1860 putative beta-glucosides ABC transporter, permease protein 1 K10237 thuF; trehalose/maltose transport system permease protein
D Tmari_1859 putative beta-glucosides ABC transporter, permease protein 2 K10238 thuG; trehalose/maltose transport system permease protein
D Tmari_0811 Chitobiose ABC transport system, sugar-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D Tmari_0812 Chitobiose ABC transport system, permease protein 1 K17245 chiF; putative chitobiose transport system permease protein
D Tmari_0813 Chitobiose ABC transport system, permease protein 2 K17246 chiG; putative chitobiose transport system permease protein
D Tmari_0429 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Tmari_0428 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Tmari_0427 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Tmari_0111 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0960 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_1858 putative beta-xyloside ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D Tmari_0109 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Tmari_0957 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D Tmari_1857 putative beta-xyloside ABC transporter, permease component K10440 rbsC; ribose transport system permease protein
D Tmari_0112 D-xylose transport ATP-binding protein XylG K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_0958 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_1856 putative beta-xyloside ABC transporter, ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmari_0415 myo-inositol ABC transporter, periplasmic sugar-binding protein InoE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Tmari_0416 myo-inositol ABC transporter, permease protein InoF K17238 inoF; inositol-phosphate transport system permease protein
D Tmari_0417 myo-inositol ABC transporter, permease protein InoG K17239 inoG; inositol-phosphate transport system permease protein
D Tmari_0418 myo-inositol ABC transporter, ATP-binding protein InoL K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Tmari_1126 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Tmari_1127 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Tmari_1128 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Tmari_0099 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Tmari_0101 Sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D Tmari_0102 Sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D Tmari_0100 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Tmari_0191 YbbM seven transmembrane helix protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Tmari_0192 YbbL ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Tmari_0594 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmari_1870 Multiple sugar ABC transporter, substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmari_1242 ABC transporter, substrate binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmari_0275 putative arabinoside ABC transporter, periplasmic sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmari_0595 N-Acetyl-D-glucosamine ABC transport system, permease protein 1 K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmari_1869 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmari_0276 putative arabinoside ABC transporter, permease component 1 K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmari_1241 Sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmari_0277 putative arabinoside ABC transporter, permease component 2 K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmari_0597 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmari_1868 Sugar ABC transporter, permease protein precursor K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmari_1240 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmari_1269 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tmari_1268 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D Tmari_1267 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D Tmari_1266 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tmari_0592 Amino acid ABC transporter, periplasmic amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Tmari_0591 Amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D Tmari_0590 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Tmari_1141 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmari_1142 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D Tmari_1143 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D Tmari_1144 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmari_1145 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmari_1177 Two-component response regulator K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Tmari_1754 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D Tmari_1755 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D Tmari_1756 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D Tmari_1757 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D Tmari_1758 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D Tmari_0298 Xyloglucan ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0457 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0307 Xylose-regulated ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1157 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0028 Beta-glucoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0528 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1206 Xyloglucan ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1230 Mannoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1233 Mannoside ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0053 Xylose-regulated ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_1071 putative rhamnose ABC transporter, substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0068 Xylobiose ABC transport system, sugar-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmari_0299 Xyloglucan ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1156 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0027 Beta-glucoside ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0500 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0529 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1205 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1229 Mannoside ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0057 Xylose-regulated ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_1070 putative rhamnose ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0069 Xylobiose ABC transport system, permease protein 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmari_0300 Xyloglucan ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1160 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0026 Beta-glucoside ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0499 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0530 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1204 Xylobiose ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1228 Mannoside ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0056 Xylose-regulated ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_1069 putative rhamnose ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0070 Xylobiose ABC transport system, permease protein 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmari_0495 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1201 Xylobiose ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1159 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0301 Xyloglucan ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0055 Xylose-regulated ABC transporter, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0025 Beta-glucoside ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0071 Xylobiose ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1068 putative rhamnose ABC transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_0498 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1227 Mannoside ABC transport system, ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmari_1067 putative rhamnose ABC transporter, ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0072 Xylobiose ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0054 Xylose-regulated ABC transporter, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1203 Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0024 Beta-glucoside ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1226 Mannoside ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0497 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0527 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0302 Xyloglucan ABC transport system, ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_1158 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmari_0187 Iron(III) dicitrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tmari_0188 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D Tmari_0189 iron(III) ABC transporter, ATP-binding protein, putative K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tmari_0077 Vitamin B12 ABC transporter, B12-binding component BtuF K25034 btuF; cobalamin transport system substrate-binding protein
D Tmari_0076 Vitamin B12 ABC transporter, permease component BtuC K25027 btuC; cobalamin transport system permease protein
D Tmari_0075 Vitamin B12 ABC transporter, ATPase component BtuD K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Tmari_0121 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D Tmari_0123 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D Tmari_0122 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tmari_0800 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D Tmari_1883 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D Tmari_1672 ATPase component of general energizing module of ECF transporters K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmari_0220 ATPase component of general energizing module of ECF transporters K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmari_1058 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Tmari_1033 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D Tmari_1032 ABC transporter, ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D Tmari_0386 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_0540 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1310 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1311 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_0385 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1106 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1313 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1333 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_1411 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_0795 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_0765 putative ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmari_0387 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_1334 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_1410 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_0766 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_0794 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_1309 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_1647 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_0541 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmari_0349 Cell division protein FtsX K02004 ABC.CD.P; putative ABC transport system permease protein
D Tmari_0706 ABC-type transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D Tmari_0350 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmari_0705 Cell division transporter, ATP-binding protein FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmari_1423 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Tmari_1375 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Tmari_0816 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Tmari_1709 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26937 dinF; MATE family, multidrug efflux pump
D Tmari_1011 D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D Tmari_1036 putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Tmari_1611 Niacin transporter NiaP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Tmari_1435 Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D Tmari_1061 potassium channel, putative K10716 kch; voltage-gated potassium channel
D Tmari_0399 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D Tmari_1571 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D Tmari_1168 Magnesium transporter K06213 mgtE; magnesium transporter
D Tmari_0676 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D Tmari_0677 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D Tmari_0558 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Tmari_0017 Protein crcB like protein K06199 crcB; fluoride exporter
D Tmari_0847 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Tmari_0639 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Tmari_0535 Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Tmari_1746 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D Tmari_0725 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D Tmari_1094 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D Tmari_1092 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D Tmari_1093 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D Tmari_0820 Uracil permease K02824 uraA; uracil permease
D Tmari_0593 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D Tmari_1828 chromate transport protein, putative K07240 chrA; chromate transporter
D Tmari_1829 chromate transport protein, putative K07240 chrA; chromate transporter
D Tmari_0320 TRAP transporter solute receptor, unknown substrate 8 K11688 dctP; C4-dicarboxylate-binding protein DctP
D Tmari_0322 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 8 K21393 yiaN; TRAP-type transport system large permease protein
D Tmari_1180 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D Tmari_1116 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Tmari_1216 Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Tmari_1110 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Tmari_1217 putative, Na(+) H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Tmari_1111 Na(+) H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Tmari_1218 NADH dehydrogenase, putative K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Tmari_1212 Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Tmari_1113 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Tmari_1213 Na(+) H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Tmari_1114 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Tmari_1214 Na(+) H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Tmari_0083 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D Tmari_0421 Malate permease K24180 mleP; malate permease and related proteins
D Tmari_0227 Transporter K24180 mleP; malate permease and related proteins
D Tmari_1356 Permease K03548 perM; putative permease
D Tmari_1461 Substrate-specific component RibU of riboflavin ECF transporter K23675 fmnP; riboflavin transporter
D Tmari_0793 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D Tmari_0608 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D Tmari_0231 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tmari_0414 Ferrous iron transport permease EfeU K07243 FTR; high-affinity iron transporter
D Tmari_0172 Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Tmari_0882 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Tmari_0126 Pyruvate:Oxaloacetate transcarboxylase domain protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tmari_0716 Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain; Propionyl-CoA carboxylase beta chain K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Tmari_0718 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmari_0717 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Tmari_1147 cytochrome C-type biogenesis protein (ccdA), conjectural K06196 ccdA; cytochrome c-type biogenesis protein
D Tmari_0644 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Tmari_0047 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D Tmari_0048 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:tmm02044]
D Tmari_1704 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmari_0839 Type II secretory pathway, ATPase PulE K02652 pilB; type IV pilus assembly protein PilB
D Tmari_0091 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tmari_1369 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D Tmari_1740 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D Tmari_1056 Late competence protein ComEA, DNA receptor K02237 comEA; competence protein ComEA
D Tmari_0401 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tmari_1784 Late competence protein ComEC, DNA transport K02238 comEC; competence protein ComEC
D Tmari_1592 hypothetical protein K02242 comFC; competence protein ComFC
D Tmari_0910 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmari_0911 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmari_1680 flagellar biosynthesis-related protein K04061 flhB2; flagellar biosynthesis protein
D Tmari_0219 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmari_0217 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tmari_0216 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmari_0680 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tmari_0699 Flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D Tmari_0698 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmari_0697 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmari_0912 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmari_1586 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmari_0862 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmari_0449 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Tmari_0863 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmari_0476 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Tmari_1488 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D Tmari_1573 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmari_0568 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D Tmari_0861 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Tmari_1467 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tmm02042]
D Tmari_0847 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tmm02022]
D Tmari_1663 Sensor histidine kinase HpkA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmari_0125 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_0855 Osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_1263 Phosphate regulon sensor protein PhoR (SphS) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tmari_1264 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K02483 K02483; two-component system, OmpR family, response regulator
D Tmari_0702 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmari_0700 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmari_0405 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:tmm02035]
D Tmari_0702 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmari_0701 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_0719 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Tmari_1627 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D Tmari_0906 Chemotaxis protein CheC --inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tmari_0905 Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tmari_0461 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmari_0405 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmari_0700 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmari_1434 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0020 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1149 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_1153 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0426 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tmari_0217 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tmari_0216 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmari_0508 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Tmari_0699 Flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D Tmari_0698 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmari_0697 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmari_0912 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmari_0910 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmari_0911 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmari_0218 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmari_0679 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmari_0680 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tmari_0219 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmari_1547 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D Tmari_1549 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Tmari_1548 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D Tmari_0678 flagellar protein, putative K02415 fliL; flagellar protein FliL
D Tmari_1373 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tmari_1371 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tmari_1372 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tmari_0673 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tmari_1551 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tmari_1550 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tmari_0634 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tmari_0674 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tmari_0080 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Tmari_0079 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tmari_0130 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_0759 Flagellin protein FlaA K02406 fliC; flagellin
D Tmari_1129 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D Tmari_1186 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tmari_0904 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D Tmari_0676 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D Tmari_0677 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D Tmari_0078 Flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D Tmari_0082 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tmari_1130 Flagellin protein FlaG K06603 flaG; flagellar protein FlaG
D Tmari_0675 Flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D Tmari_0909 Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Tmari_0908 Flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D Tmari_1369 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D Tmari_0839 Type II secretory pathway, ATPase PulE K02652 pilB; type IV pilus assembly protein PilB
D Tmari_0091 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tmari_1704 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tmm04812]
D Tmari_0084 putative gene for the hypothesized phosphomevalonate decarboxylase; Predicted dioxygenase K06990 MEMO1; MEMO1 family protein
D Tmari_0586 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_1552 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_0838 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmari_0837 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tmari_1051 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tmari_1885 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
C 04147 Exosome [BR:tmm04147]
D Tmari_0879 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmari_0688 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmari_0689 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmari_0206 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmari_0808 putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Tmari_0502 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmari_0371 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmari_1392 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmari_1354 Inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tmari_1510 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmari_1882 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmari_0170 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tmari_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tmari_1391 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Tmari_1790 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmari_1789 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmari_0304 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D Tmari_1197 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmari_1436 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmari_0954 Unknown pentose kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmari_0945 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmari_0153 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Tmari_0325 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmari_1254 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmari_0379 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmari_1539 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Tmari_1018 NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Tmari_1162 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
C 02048 Prokaryotic defense system [BR:tmm02048]
D Tmari_1807 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmari_1806 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Tmari_1809 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Tmari_1808 CRISPR-associated RecB family exonuclease Cas4a K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tmari_1824 CRISPR repeat RNA endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Tmari_1812 CRISPR-associated protein, family K19114 csh1; CRISPR-associated protein Csh1
D Tmari_1811 CRISPR-associated protein, family K19115 csh2; CRISPR-associated protein Csh2
D Tmari_1810 CRISPR-associated protein, family K19116 cas5h; CRISPR-associated protein Cas5h
D Tmari_1822 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Tmari_1821 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Tmari_1820 CRISPR-associated RAMP Csm3 K09002 csm3; CRISPR-associated protein Csm3
D Tmari_1819 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Tmari_1818 CRISPR-associated protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Tmari_1805 CRISPR-associated RAMP Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D Tmari_1804 CRISPR-associated RAMP Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D Tmari_1803 CRISPR-associated RAMP Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D Tmari_1802 CRISPR-associated RAMP Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D Tmari_1801 CRISPR-associated RAMP Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D Tmari_1800 CRISPR-associated RAMP Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6
D Tmari_0326 m4C-methyltransferase K24451 zim; modification methylase
D Tmari_1163 hypothetical protein K03973 pspC; phage shock protein C
D Tmari_0838 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmari_0586 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_1552 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmari_1890 Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmari_1700 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tmm01504]
D Tmari_1546 hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tmm00537]
D Tmari_0153 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tmm03100]
D Tmari_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmari_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmari_R0041 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmari_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmari_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tmari_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmari_R0034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmari_R0061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmari_R0065 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmari_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmari_R0011 tRNA-His K14226 tRNA-His; tRNA His
D Tmari_R0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmari_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmari_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmari_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmari_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmari_R0055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmari_R0003 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0062 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmari_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0027 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0064 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmari_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmari_R0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tmari_R0024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmari_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmari_R0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmari_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmari_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmari_R0039 SRP_bact K01983 ffs; SRP RNA
D Tmari_R0040 SRP_euk_arch K01983 ffs; SRP RNA
D Tmari_R0033 bacterial RNase P class A K01978 rnpB; M1 RNA
D Tmari_R0031 Tmari_R0031 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Tmari_1012 oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Tmari_1540 putative electron transfer flavoprotein-quinone oxidoreductase FixC K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Tmari_0781 Alkyl hydroperoxide reductase subunit C-like protein K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D Tmari_0384 nitroreductase K24130 K24130; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D Tmari_0008 NADP-reducing hydrogenase, subunit B K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D Tmari_0199 Periplasmic [Fe] hydrogenase large subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Tmari_1432 Periplasmic [Fe] hydrogenase large subunit K17997 hydA; iron-hydrogenase subunit alpha [EC:1.12.1.4]
D Tmari_1431 NAD-reducing hydrogenase subunit HoxF K17998 hydB; iron-hydrogenase subunit beta [EC:1.12.1.4]
D Tmari_1430 NAD-reducing hydrogenase subunit HoxE K17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]
D Tmari_0658 Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Tmari_1134 Ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2]
D Tmari_1648 hydrogenase, subunit gamma related protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Tmari_0382 Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Tmari_1560 Radical SAM, Pyruvate-formate lyase-activating enzyme like protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmari_1243 Radical SAM, Pyruvate-formate lyase-activating enzyme like protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmari_0106 radical activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmari_0926 radical activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmari_0704 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Tmari_0571 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Tmari_1236 Dolichyl-phosphate mannoosyltransferase, involved in cell wall biogenesis K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D Tmari_1232 putative glycoside hydrolase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D Tmari_1867 putative glycoside hydrolase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Tmari_0357 hypothetical protein K23395 E2.4.1.361; GDP-mannose:di-myo-inositol-1,3'-phosphate beta-1,2-mannosyltransferase [EC:2.4.1.361]
D Tmari_0625 Putative teichuronic acid biosynthesis glycosyl transferase TuaC K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Tmari_0967 Circadian phase modifier / NCAIR mutase (PurE)-related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Tmari_0156 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Tmari_1561 Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Tmari_1781 Dihydroxyacetone kinase family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Tmari_0198 DNA integrity scanning protein disA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Tmari_1024 Carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Tmari_0334 Hydrolase (HAD superfamily) K24085 estD; esterase [EC:3.1.1.1]
D Tmari_0556 putative metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Tmari_0169 Hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Tmari_0174 Uncharacterized protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Tmari_1516 Membrane protein containing HD superfamily hydrolase domain, YQFF like protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Tmari_0184 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Tmari_0667 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Tmari_0058 Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Tmari_0067 Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Tmari_1208 Putative galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Tmari_0052 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Tmari_0306 Alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Tmari_1831 8-oxoguanine DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Tmari_1670 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Tmari_0213 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Tmari_1138 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Tmari_0660 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Tmari_0924 YjeF protein, function unknown K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Tmari_0968 ATP-utilizing enzyme of the PP-loop superfamily K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Tmari_1079 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Tmari_0966 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Tmari_0243 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Tmari_0242 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Tmari_0247 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
D Tmari_0563 Sugar/maltose fermentation stimulation like protein K06206 sfsA; sugar fermentation stimulation protein A
D Tmari_1146 Acetoin utilization acuB protein K04767 acuB; acetoin utilization protein AcuB
D Tmari_0894 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Tmari_0929 Ferredoxin K05337 fer; ferredoxin
D Tmari_0244 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Tmari_0245 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Tmari_0246 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Tmari_1379 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tmari_1538 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Tmari_1541 Ferredoxin-like protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D Tmari_1476 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Tmari_1739 Hypothetical protein YggS, proline synthase co-transcribed bacterial PROSC like protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Tmari_1397 Integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
D Tmari_0467 Integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Tmari_1691 Cold shock protein CspG K03704 cspA; cold shock protein
D Tmari_1889 Cold shock protein CspA K03704 cspA; cold shock protein
D Tmari_0400 Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Tmari_0367 hypothetical protein K07745 K07745; transcriptional regulator
D Tmari_1698 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D Tmari_1693 RNA binding protein, contains ribosomal protein S1 domain K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D Tmari_0694 Cell division trigger factor K03545 tig; trigger factor
D Tmari_0252 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D Tmari_0509 MG(2+) chelatase family protein / ComM-related protein K07391 comM; magnesium chelatase family protein
D Tmari_0921 OsmC/Ohr family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D Tmari_0990 hypothetical protein K07445 K07445; putative DNA methylase
D Tmari_0934 hypothetical protein K07449 K07449; similar to archaeal holliday junction resolvase and Mrr protein
D Tmari_1304 Ribonuclease HI-related protein K06993 K06993; ribonuclease H-related protein
D Tmari_1565 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Tmari_0380 endonuclease III domain protein K07457 K07457; endonuclease III related protein
D Tmari_0251 putative endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D Tmari_0248 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D Tmari_0504 ATPase, AAA family K07478 ycaJ; putative ATPase
D Tmari_0778 putative transposase K07491 rayT; REP-associated tyrosine transposase
D Tmari_1841 putative transposase K07491 rayT; REP-associated tyrosine transposase
D Tmari_1030 transposase, putative K07496 K07496; putative transposase
D Tmari_0133 hypothetical protein K07496 K07496; putative transposase
D Tmari_0044 transposase, putative K07496 K07496; putative transposase
D Tmari_1840 transposase, putative K07496 K07496; putative transposase
D Tmari_1685 transposase, putative K07496 K07496; putative transposase
D Tmari_1048 transposase, IS605-TnpB family K07496 K07496; putative transposase
D Tmari_0777 transposase, putative K07496 K07496; putative transposase
D Tmari_0973 hypothetical protein K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D Tmari_0687 hypothetical protein co-occurring with RecR K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Tmari_0370 RND multidrug efflux transporter; Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Tmari_0919 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Tmari_0259 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Tmari_1115 hypothetical protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D Tmari_1466 RNA-binding protein Jag K06346 jag; spoIIIJ-associated protein
D Tmari_0190 SpoVS-related protein, type 2 K06416 spoVS; stage V sporulation protein S
D Tmari_1063 SpoVS-related protein, type 2 K06416 spoVS; stage V sporulation protein S
D Tmari_0899 SpoVS-related protein, type 3 K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D Tmari_1515 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Tmari_0492 putative ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D Tmari_1057 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
C 99994 Others
D Tmari_1742 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D Tmari_1265 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D Tmari_1060 Periplasmic divalent cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Tmari_0712 serine protease K07001 K07001; NTE family protein
D Tmari_0641 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Tmari_1184 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D Tmari_1376 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Tmari_0963 LemA family protein K03744 lemA; LemA protein
D Tmari_0162 hypothetical protein K08974 K08974; putative membrane protein
D Tmari_1544 hypothetical protein K08980 K08980; putative membrane protein
D Tmari_0313 hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D Tmari_1308 Arylsulfatase regulator (Fe-S oxidoreductase) K06871 K06871; uncharacterized protein
D Tmari_1324 AstB/ChuR-related protein K06871 K06871; uncharacterized protein
D Tmari_1330 astB/chuR-related protein K06871 K06871; uncharacterized protein
D Tmari_1331 hypothetical protein K06871 K06871; uncharacterized protein
D Tmari_0964 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D Tmari_1555 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein
D Tmari_1014 motifATP/GTP-binding site motif A (P-loop); G-protein coupled receptors signature K06921 K06921; uncharacterized protein
D Tmari_1441 Succinyl-CoA synthetase, alpha subunit-related enzyme K06929 K06929; uncharacterized protein
D Tmari_1575 KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D Tmari_1519 putative metal-dependent peptidase K06973 K06973; uncharacterized protein
D Tmari_1118 protein of unknown function DUF861, cupin_3 K06995 K06995; uncharacterized protein
D Tmari_1302 membrane protein, putative K07003 K07003; uncharacterized protein
D Tmari_0818 membrane protein K07003 K07003; uncharacterized protein
D Tmari_1422 Iron-sulfur cluster assembly protein SufB K07033 K07033; uncharacterized protein
D Tmari_0648 hypothetical protein K07075 K07075; uncharacterized protein
D Tmari_1190 Aldo/keto reductase K07079 K07079; uncharacterized protein
D Tmari_1001 Transporter K07089 K07089; uncharacterized protein
D Tmari_0374 Membrane protein, putative K07090 K07090; uncharacterized protein
D Tmari_1107 putative phosphoesterase K07095 K07095; uncharacterized protein
D Tmari_0228 hypothetical protein K07095 K07095; uncharacterized protein
D Tmari_1080 Phosphoesterase K07095 K07095; uncharacterized protein
D Tmari_1610 Transcriptional repressor for NAD biosynthesis in gram-positives K07105 K07105; uncharacterized protein
D Tmari_0985 hypothetical protein K07112 K07112; uncharacterized protein
D Tmari_0616 ATPase K07133 K07133; uncharacterized protein
D Tmari_1270 ATPase K07133 K07133; uncharacterized protein
D Tmari_0599 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D Tmari_0031 Ferredoxin K07138 K07138; uncharacterized protein
D Tmari_0511 putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D Tmari_0224 hypothetical protein K07150 K07150; uncharacterized protein
D Tmari_1468 Protein YidD K08998 K08998; uncharacterized protein
D Tmari_0158 hypothetical protein K08999 K08999; uncharacterized protein
D Tmari_1677 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D Tmari_1082 hypothetical protein K09009 K09009; uncharacterized protein
D Tmari_1017 Uncharacterized protein K09010 K09010; uncharacterized protein
D Tmari_0690 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D Tmari_0780 DUF82 domain-containing protein K09122 K09122; uncharacterized protein
D Tmari_0887 Uncharacterized protein K09126 K09126; uncharacterized protein
D Tmari_0194 putative transmembrane protein K09129 K09129; uncharacterized protein
D Tmari_1004 HEPN domain protein K09132 K09132; uncharacterized protein
D Tmari_0478 hypothetical protein K09133 K09133; uncharacterized protein
D Tmari_0018 hypothetical protein K09137 K09137; uncharacterized protein
D Tmari_1559 putative ACR K09141 K09141; uncharacterized protein
D Tmari_1374 DUF369 domain-containing protein K09143 K09143; uncharacterized protein
D Tmari_1008 hypothetical protein K09155 K09155; uncharacterized protein
D Tmari_0787 Ferritin/ribonucleotide reductase-like protein K09700 K09700; uncharacterized protein
D Tmari_0736 hypothetical protein K09749 K09749; uncharacterized protein
D Tmari_1658 YlxP-like protein K09764 K09764; uncharacterized protein
D Tmari_0567 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D Tmari_1655 DUF327 domain-containing protein K09770 K09770; uncharacterized protein
D Tmari_1245 hypothetical protein K09775 K09775; uncharacterized protein
D Tmari_1590 DUF458 domain-containing protein K09776 K09776; uncharacterized protein
D Tmari_0989 hypothetical protein K09934 K09934; uncharacterized protein
D Tmari_1445 hypothetical protein K09942 K09942; uncharacterized protein
D Tmari_0278 secreted protein K09955 K09955; uncharacterized protein
D Tmari_0916 Phosphate transport regulator (PhoU like protein) K07220 K07220; uncharacterized protein
D Tmari_0258 Phosphate transport regulator K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024