+F Repair protein KO #

  DNA Repair and Recombination Proteins - Phaeoacremonium minimum

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D UCRPA7_8617 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E UCRPA7_3794 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E UCRPA7_1261 putative g u mismatch-specific uracil dna glycosylase protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E UCRPA7_7471 putative dna repair protein ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E UCRPA7_6597 putative dna-(apurinic or apyrimidinic site) lyase 1 protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E UCRPA7_3158 putative dna-(apurinic or apyrimidinic site) lyase 2 protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F UCRPA7_4935 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F UCRPA7_6951 putative dna polymerase delta small subunit protein K02328 POLD2; DNA polymerase delta subunit 2 F UCRPA7_575 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3 F UCRPA7_4054 putative dna polymerase delta protein K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F UCRPA7_7158 putative dna polymerase epsilon protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F UCRPA7_1778 putative dna polymerase epsilon subunit b protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] E UCRPA7_7707 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen E UCRPA7_1486 putative dna-repair protein rad2 protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E UCRPA7_1423 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors D Other BER factors E UCRPA7_1512 putative hit domain-containing protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E UCRPA7_8812 putative bifunctional polynucleotide phosphatase kinase protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E UCRPA7_4307 putative poly polymerase 2 adp-ribosyltransferase 2 protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F UCRPA7_4707 putative dna repair protein rhp41 protein K10838 XPC; xeroderma pigmentosum group C-complementing protein F UCRPA7_3431 putative rad4 family protein K10838 XPC; xeroderma pigmentosum group C-complementing protein F UCRPA7_1765 putative uv excision repair protein rad23 protein K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F UCRPA7_1639 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F UCRPA7_3141 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4 F UCRPA7_3405 putative dna damage-binding protein 1 protein K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F UCRPA7_6964 putative dna repair protein K15082 RAD7; DNA repair protein RAD7 F UCRPA7_6965 putative dna repair protein rad16 protein K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F UCRPA7_6152 putative dna-directed rna polymerase ii largest subunit protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F UCRPA7_5967 putative dna-directed rna polymerase ii subunit rpb2 protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F UCRPA7_4509 putative rna polymerase ii subunit 3 protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F UCRPA7_7627 putative rna polymerase rpb4 family protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F UCRPA7_7918 putative dna-directed rna polymerases ii 24 kda polypeptide protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F UCRPA7_370 putative dna-directed rna polymerases i protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F UCRPA7_550 putative dna-directed rna polymerases i protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F UCRPA7_4747 putative dna directed rna polymerase ii 15 kda protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F UCRPA7_5942 putative dna-directed rna polymerases i ii iii subunit 10 protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 E Cul4-CSA complex F UCRPA7_1639 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F UCRPA7_3141 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4 F UCRPA7_3405 putative dna damage-binding protein 1 protein K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F UCRPA7_3871 putative dna repair and recombination protein rad26 protein K10841 ERCC6; DNA excision repair protein ERCC-6 D TFIIH complex E UCRPA7_2230 putative dna repair helicase rad25 protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E UCRPA7_149 putative dna repair helicase rad3 protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E UCRPA7_4893 putative dna repair helicase rad3 protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E UCRPA7_160 putative tfiih p62 subunit domain-containing protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E UCRPA7_4422 putative tfiih basal transcription factor complex p47 subunit protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E UCRPA7_841 putative rna polymerase ii transcription factor b subunit 4 protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E UCRPA7_1168 putative rna polymerase ii transcription factor b subunit 2 protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E UCRPA7_937 putative rna polymerase ii transcription factor b subunit 5 protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E UCRPA7_1533 putative serine threonine-protein kinase protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E UCRPA7_424 putative cyclin ccl1 protein K06634 CCNH; cyclin H E UCRPA7_3780 putative cdk-activating kinase assembly factor mat1 protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E UCRPA7_4581 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1 E UCRPA7_5572 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2 E UCRPA7_6894 putative dna replication factor a subunit ssb3 protein K10740 RPA3; replication factor A3 D Other NER factors E UCRPA7_7772 putative dna repair protein rad14 protein K10847 XPA; DNA-repair protein complementing XP-A cells E UCRPA7_4698 putative mating-type switching protein swi10 protein K10849 ERCC1; DNA excision repair protein ERCC-1 E UCRPA7_5426 putative dna repair protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E UCRPA7_5920 putative dna-repair protein rad13 protein K10846 ERCC5; DNA excision repair protein ERCC-5 E UCRPA7_1423 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E UCRPA7_4029 putative cullulin 3 protein K03869 CUL3; cullin 3 E UCRPA7_858 putative transcriptional elongation regulator (elongin c) protein K03872 ELOC; elongin-C E UCRPA7_132 putative rna polymerase ii transcription factor siii subunit a protein K15077 ELA1; elongin-A C MMR (mismatch excision repair) D Mismatch and loop recognition factors E UCRPA7_2497 putative dna mismatch repair protein msh-2 protein K08735 MSH2; DNA mismatch repair protein MSH2 E UCRPA7_8052 putative dna mismatch repair protein msh3 protein K08736 MSH3; DNA mismatch repair protein MSH3 E UCRPA7_7416 putative dna mismatch repair protein msh6 protein K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E UCRPA7_5536 putative dna mismatch repair protein K08734 MLH1; DNA mismatch repair protein MLH1 E UCRPA7_2967 putative dna mismatch repair protein pms1 protein K10858 PMS2; DNA mismatch repair protein PMS2 D DNA polymerase delta complex E UCRPA7_4935 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E UCRPA7_6951 putative dna polymerase delta small subunit protein K02328 POLD2; DNA polymerase delta subunit 2 E UCRPA7_575 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3 E UCRPA7_4054 putative dna polymerase delta protein K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E UCRPA7_4581 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1 E UCRPA7_5572 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2 E UCRPA7_6894 putative dna replication factor a subunit ssb3 protein K10740 RPA3; replication factor A3 D RFC (replication factor C) E UCRPA7_4506 putative replication factor c subunit 1 protein K10754 RFC1; replication factor C subunit 1 E UCRPA7_2441 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4 E UCRPA7_3054 putative replication factor c subunit 4 protein K10755 RFC2_4; replication factor C subunit 2/4 E UCRPA7_212 putative replication factor c subunit 5 protein K10756 RFC3_5; replication factor C subunit 3/5 E UCRPA7_7758 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E UCRPA7_7707 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen E UCRPA7_2521 putative exonuclease 1 protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E UCRPA7_1423 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E UCRPA7_3468 putative wd repeat-containing protein K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E UCRPA7_7737 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11 E UCRPA7_5900 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E UCRPA7_7737 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11 E UCRPA7_5900 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA complex E UCRPA7_6717 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51 D RecA family proteins E UCRPA7_6717 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51 E UCRPA7_4504 putative dna repair protein rad57 protein K10958 RAD57; DNA repair protein RAD57 D Rad52 family proteins E UCRPA7_1874 putative dna repair and recombination protein rhm52 protein K10873 RAD52; DNA repair and recombination protein RAD52 D Rad54 family proteins E UCRPA7_2950 putative dna repair and recombination protein rad54 protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] D RecQ family DNA helicases D Bloom's syndrome complex (BTR) E UCRPA7_3136 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E UCRPA7_2490 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1 D RPA (replication factor A) E UCRPA7_4581 putative replication factor-a protein 1 protein K07466 RFA1; replication factor A1 E UCRPA7_5572 putative replication protein a 32 kda subunit protein K10739 RFA2; replication factor A2 E UCRPA7_6894 putative dna replication factor a subunit ssb3 protein K10740 RPA3; replication factor A3 D Protein phosphatase 4 E UCRPA7_7906 putative suppressor of mek1 protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E UCRPA7_5412 putative structural maintenance of chromosome complex subunit protein K22803 SMC5; structural maintenance of chromosomes protein 5 E UCRPA7_1942 putative dna repair protein K22804 SMC6; structural maintenance of chromosomes protein 6 E UCRPA7_1349 putative dna repair protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E UCRPA7_2704 putative chromosomal organization and dna repair protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E UCRPA7_4878 putative nuclear protein qri2 protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E UCRPA7_5159 putative ercc4 domain-containing protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] E UCRPA7_7601 putative crossover junction endonuclease mus81 protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E UCRPA7_8145 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E UCRPA7_3767 putative dna repair protein dds20 mei5 protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1 E UCRPA7_8250 putative flap structure-specific endonuclease protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E UCRPA7_5147 putative histone acetylase complex subunit protein K11339 MORF4L1; mortality factor 4-like protein 1 E UCRPA7_4025 putative zinc metallopeptidase protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E UCRPA7_3966 putative atp-dependent dna helicase mph1 protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex E UCRPA7_471 putative ku70 protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E UCRPA7_3133 putative ku family dna protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D MRX complex E UCRPA7_7737 putative dna repair protein rad32 protein K10865 MRE11; double-strand break repair protein MRE11 E UCRPA7_5900 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D DNA Ligase 4 complex E UCRPA7_7381 putative dna ligase 4 protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E UCRPA7_8372 putative dna polymerase beta protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7] E UCRPA7_7598 putative dna polymerase protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7] D Other NHEJ factors E UCRPA7_1512 putative hit domain-containing protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E UCRPA7_2921 putative endonuclease exonuclease phosphatase family protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors E UCRPA7_3078 putative apoptosis-inducing taf9-like domain 1 family protein K11511 APITD1; centromere protein S E UCRPA7_7522 hypothetical protein K15360 STRA13; centromere protein X D Bloom's syndrome complex (BTR) E UCRPA7_3136 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E UCRPA7_2490 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1 D FANCD2-I complex D Downstream FA components D Other FA pathway factors E UCRPA7_4036 putative coiled-coil domain-containing protein mtmr15 protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E UCRPA7_6717 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51 E UCRPA7_4068 putative wd repeat-containing protein 5b protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others E UCRPA7_6345 putative wd repeat-containing protein 70 protein K24752 WDR70; WD repeat-containing protein 70 E UCRPA7_3468 putative wd repeat-containing protein K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D UCRPA7_6313 putative sister chromatid cohesion protein eso1 protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D UCRPA7_2101 putative impb mucb samb family protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7] D UCRPA7_4788 putative dna polymerase iv protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group D UCRPA7_2981 putative ubiquitin-conjugating enzyme e2 2 protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D UCRPA7_5368 putative dna repair protein rad5 protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D UCRPA7_3021 putative rad5-like protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D UCRPA7_4867 putative ubiquitin-conjugating enzyme e2 13 protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D UCRPA7_7707 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen D UCRPA7_2532 putative hmg box-containing protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D UCRPA7_7835 putative checkpoint protein hus1 protein K10903 HUS1; HUS1 checkpoint protein D UCRPA7_3678 putative dna repair exonuclease rad1 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D UCRPA7_6716 putative cell cycle checkpoint protein rad17 protein K06662 HRAD17; cell cycle checkpoint protein D UCRPA7_2441 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4 D UCRPA7_3054 putative replication factor c subunit 4 protein K10755 RFC2_4; replication factor C subunit 2/4 D UCRPA7_212 putative replication factor c subunit 5 protein K10756 RFC3_5; replication factor C subunit 3/5 D UCRPA7_7758 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D UCRPA7_3678 putative dna repair exonuclease rad1 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D UCRPA7_6899 putative topoisomerase 1-associated factor 1 protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D UCRPA7_6288 putative mrc1-like domain-containing protein K11272 MRC1; mediator of replication checkpoint protein 1 C Triple T complex C BAG6-UBL4A-GET4 complex D UCRPA7_185 hypothetical protein K23388 UBL4; ubiquitin-like protein 4 D UCRPA7_4934 putative duf410 domain-containing protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D UCRPA7_5390 putative protein kinase rad3 protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D UCRPA7_3142 putative ataxia telangiectasia mutated protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D UCRPA7_3639 putative serine threonine-protein kinase chk1 protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D UCRPA7_2561 putative checkpoint kinase 2-like protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D UCRPA7_4005 putative m-phase inducer phosphatase protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D UCRPA7_2069 putative dna damage checkpoint protein rad24 protein K06630 YWHAE; 14-3-3 protein epsilon D UCRPA7_7547 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon D UCRPA7_3245 putative vacuolar sorting atpase protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D UCRPA7_4118 putative ubiquitin family protein K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D UCRPA7_100 putative dna polymerase v-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] C Nucleases D UCRPA7_4040 putative dna cross-link repair protein snm1 protein K15340 DCLRE1A; DNA cross-link repair 1A protein D UCRPA7_1991 putative nuclease s1 protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D UCRPA7_4857 putative nuclease s1 protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] C Helicases D UCRPA7_8919 putative snf2 superfamily rad26-like protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-] C PSO4 complex D UCRPA7_1607 putative cell cycle control protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D UCRPA7_1346 putative pre-mrna-splicing factor cef-1 protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D UCRPA7_318 putative bcas2 family protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D UCRPA7_6534 putative pre-mrna-splicing factor prp46 protein K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D UCRPA7_7709 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D UCRPA7_8211 putative ribonucleoside-diphosphate reductase large chain protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D UCRPA7_77 putative ribonucleoside-diphosphate reductase small subunit protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D UCRPA7_8617 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E UCRPA7_3794 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E UCRPA7_2588 putative -gpd superfamily base excision dna repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E UCRPA7_2706 putative formamidopyrimidine-dna glycosylase protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E UCRPA7_7471 putative dna repair protein ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E UCRPA7_4646 putative atp-dependent dna helicase srs2 protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors E UCRPA7_4646 putative atp-dependent dna helicase srs2 protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D UCRPA7_7709 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024