+D GENES KO
#
KEGG Orthology (KO) - Thermoanaerobacter mathranii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tmt00010]
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_1594 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_0177 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmath_1560 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tmath_1562 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmath_1561 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmath_2073 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Tmath_1559 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmath_1619 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmath_0972 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmath_0195 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_2023 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0499 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_1875 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmath_1874 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmath_0320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Tmath_1696 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_0373 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_0668 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_0374 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_0525 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:tmt00020]
D Tmath_0528 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Tmath_0443 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_1875 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmath_1874 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmath_1873 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmath_1876 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmath_0123 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmath_0124 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmath_2023 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0499 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tmt00030]
D Tmath_1594 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmath_1020 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tmath_1723 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_1019 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_0229 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_0666 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1354 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1822 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmath_1823 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmath_1682 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tmath_0186 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_0667 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_0966 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Tmath_0261 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Tmath_0520 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_2145 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tmath_0219 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_0227 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_0238 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_1724 Carbohydrate kinase, FGGY-like protein K25031 gntK; gluconokinase [EC:2.7.1.12]
D Tmath_0240 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Tmath_0225 PTS system sorbose subfamily IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D Tmath_0223 phosphotransferase system PTS sorbose-specific IIC subunit K17466 dgaC; D-glucosaminate PTS system EIIC component
D Tmath_0177 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:tmt00040]
D Tmath_1721 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Tmath_0237 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Tmath_0215 SAF domain protein K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D Tmath_0216 Altronate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D Tmath_0241 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Tmath_1722 Mannitol dehydrogenase domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Tmath_0239 Mannitol dehydrogenase domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Tmath_1726 conserved hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D Tmath_0949 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0766 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0344 Orotidine 5'-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D Tmath_0345 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Tmath_1685 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Tmath_0346 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Tmath_0666 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1354 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1687 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Tmath_1686 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D Tmath_0234 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Tmath_0233 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Tmath_1428 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tmt00051]
D Tmath_1672 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tmath_1550 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_1787 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Tmath_0724 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmath_0114 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmath_1428 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_0378 Mannitol dehydrogenase domain protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D Tmath_2160 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Tmath_0233 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Tmath_0177 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmath_1560 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tmath_0186 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_0667 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_2158 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Tmath_0222 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tmath_0224 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Tmath_0377 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D Tmath_0375 PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:tmt00052]
D Tmath_1696 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Tmath_1712 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmath_0315 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmath_1713 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmath_1711 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_0714 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_0949 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0766 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_1704 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_0246 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_1705 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Tmath_0211 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Tmath_0212 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Tmath_0213 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_0217 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Tmath_1673 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Tmath_1715 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Tmath_0006 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Tmath_0505 alpha amylase catalytic region K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:tmt00053]
D Tmath_0343 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Tmath_0342 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Tmath_0347 putative L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D Tmath_0344 Orotidine 5'-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D Tmath_0345 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Tmath_1685 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Tmath_0346 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:tmt00500]
D Tmath_1673 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Tmath_1715 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Tmath_0006 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Tmath_0949 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0766 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0257 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmath_0390 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Tmath_0647 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0662 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0372 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0645 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0663 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0371 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0646 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0664 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0369 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0373 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_0668 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_0374 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Tmath_1593 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Tmath_1627 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Tmath_0505 alpha amylase catalytic region K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D Tmath_0316 conserved hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D Tmath_0317 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D Tmath_0800 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D Tmath_0525 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Tmath_1634 alpha amylase catalytic region K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19]
D Tmath_1952 alpha amylase catalytic region K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19]
D Tmath_0805 glycoside hydrolase family 65 central catalytic K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_1594 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmath_1672 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tmt00520]
D Tmath_0275 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tmath_0525 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Tmath_0524 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Tmath_0287 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Tmath_1041 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Tmath_1672 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tmath_1867 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmath_1868 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Tmath_2146 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tmath_0267 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Tmath_0277 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Tmath_1472 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_2217 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_1638 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmath_0190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmath_0235 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Tmath_0719 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D Tmath_0718 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D Tmath_1690 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Tmath_1691 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Tmath_0249 Xylan 1,4-beta-xylosidase K22268 xylA; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_0949 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0766 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_1712 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmath_0315 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmath_1713 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tmath_1711 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_0714 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_0222 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tmath_0224 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Tmath_1594 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmath_1550 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmath_1787 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Tmath_0114 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmath_0724 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:tmt00620]
D Tmath_2023 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0499 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_1875 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmath_1874 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Tmath_1338 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmath_1339 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmath_1619 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmath_1565 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Tmath_0320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmath_1080 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tmath_1962 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tmath_1186 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tmath_0123 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmath_0124 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmath_0972 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmath_0195 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tmath_0032 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tmath_1610 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tmath_0527 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tmt00630]
D Tmath_0528 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Tmath_1728 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_1791 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmath_0333 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmath_0332 Glycine cleavage system P-protein-like protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmath_0335 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0334 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Tmath_1441 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Tmath_0219 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_0227 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_0238 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Tmath_1021 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:tmt00640]
D Tmath_1338 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmath_1339 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmath_0881 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:tmt00650]
D Tmath_1878 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Tmath_1881 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Tmath_1880 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Tmath_1871 phosphate acetyl/butaryl transferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Tmath_2008 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmath_2009 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Tmath_2023 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0499 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_1875 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmath_1874 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmath_2094 Alcohol dehydrogenase zinc-binding domain protein K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
D Tmath_0037 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmath_0030 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tmt00660]
D Tmath_0037 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmath_0030 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmath_0033 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmath_0034 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmath_0035 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D Tmath_1560 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tmt00190]
D Tmath_0865 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tmath_2072 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Tmath_0695 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tmath_0697 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tmath_0696 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tmath_0694 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tmath_0698 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tmath_0691 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tmath_0693 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tmath_0692 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tmath_2243 ATP synthase, A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Tmath_2242 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Tmath_2245 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Tmath_2241 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Tmath_2246 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Tmath_2244 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Tmath_2249 conserved hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D Tmath_2248 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Tmath_2247 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Tmath_2053 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Tmath_1887 HAD-superfamily hydrolase, subfamily IA, variant 1 K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tmt00710]
D Tmath_1561 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmath_1562 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmath_0177 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmath_1822 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmath_1823 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmath_0186 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_0667 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tmath_1560 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tmath_0666 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1354 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tmath_1682 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tmath_0972 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tmt00720]
D Tmath_2023 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0499 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tmath_0195 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tmath_0972 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tmath_0123 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tmath_0124 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tmath_1875 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tmath_1874 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tmath_1873 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tmath_1876 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tmath_0443 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmath_0528 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Tmath_2012 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tmath_1142 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tmath_0511 Glutamate formimidoyltransferase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Tmath_1592 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Tmath_1318 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tmath_1339 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmath_1338 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:tmt00680]
D Tmath_1318 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tmath_1791 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmath_0177 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_1338 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tmath_1339 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmath_0195 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tmath_2073 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Tmath_1559 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmath_0214 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_2173 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_1194 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tmath_1753 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:tmt00910]
D Tmath_1838 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Tmath_1192 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0614 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmath_2096 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmath_0596 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:tmt00920]
D Tmath_1236 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Tmath_0397 sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D Tmath_0398 sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D Tmath_0399 sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D Tmath_1941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tmath_1057 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmath_2036 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmath_1810 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tmt00061]
D Tmath_1329 acyl carrier protein K02078 acpP; acyl carrier protein
D Tmath_1331 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmath_1333 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tmath_1328 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmath_1330 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0203 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmath_1332 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Tmath_1741 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tmt00071]
D Tmath_1741 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tmt00561]
D Tmath_1441 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Tmath_1776 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D Tmath_1775 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D Tmath_1774 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D Tmath_1781 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmath_1334 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tmath_1446 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1582 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1199 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmath_1869 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmath_0964 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Tmath_1705 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tmt00564]
D Tmath_1445 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Tmath_1780 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Tmath_1446 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1582 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1199 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmath_1869 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmath_0964 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Tmath_1248 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Tmath_1222 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Tmath_0777 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Tmath_1683 Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D Tmath_0322 dehydrogenase (flavoprotein)-like protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
D Tmath_0323 FAD dependent oxidoreductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tmt00600]
D Tmath_1704 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_0246 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_1705 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tmt00230]
D Tmath_1160 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tmath_0520 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tmath_2145 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tmath_0634 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tmath_0638 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Tmath_0636 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tmath_0633 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Tmath_0631 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Tmath_0632 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmath_0635 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Tmath_0629 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Tmath_0630 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Tmath_1213 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tmath_0637 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmath_1077 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Tmath_1189 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmath_1551 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmath_0207 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tmath_2015 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Tmath_0626 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tmath_0771 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tmath_0657 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Tmath_0627 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmath_1321 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmath_1367 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Tmath_1966 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmath_1651 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tmath_1556 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Tmath_1078 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tmath_2049 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Tmath_1816 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Tmath_2231 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tmath_0379 5'-Nucleotidase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D Tmath_1217 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Tmath_1913 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tmath_0132 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Tmath_0596 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tmt00240]
D Tmath_2085 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmath_2086 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmath_1387 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tmath_1386 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Tmath_1383 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Tmath_1384 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Tmath_1382 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Tmath_1385 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Tmath_1252 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Tmath_0771 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tmath_0871 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Tmath_2168 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Tmath_1198 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Tmath_1575 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Tmath_1189 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmath_0379 5'-Nucleotidase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D Tmath_0187 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tmath_1388 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tmath_1217 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Tmath_0363 transcriptional regulator, MarR family K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D Tmath_0364 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Tmath_0521 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Tmath_0519 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Tmath_1651 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tmath_1966 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmath_0188 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tmath_0143 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Tmath_1229 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Tmath_0180 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tmt00250]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_0569 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tmath_0905 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tmath_0194 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Tmath_2064 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Tmath_2084 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmath_2083 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmath_2231 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tmath_1213 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tmath_1387 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tmath_0614 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmath_2096 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tmath_1192 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_2085 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmath_2086 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmath_0632 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmath_1867 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmath_0634 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tmt00260]
D Tmath_1227 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmath_0816 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmath_1812 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_2179 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_2177 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Tmath_2178 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tmath_1791 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmath_1441 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Tmath_2073 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Tmath_1559 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tmath_0214 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_2173 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_1194 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tmath_0333 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmath_0332 Glycine cleavage system P-protein-like protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmath_0335 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0334 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Tmath_1023 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tmath_1024 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tmath_1417 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tmath_1418 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tmt00270]
D Tmath_1941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tmath_1057 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmath_2036 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tmath_1591 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmath_0555 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tmath_1201 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tmath_1184 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tmath_0207 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tmath_1431 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Tmath_1426 purine or other phosphorylase family 1 K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Tmath_1427 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Tmath_2054 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D Tmath_1414 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Tmath_1425 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Tmath_1541 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Tmath_1227 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmath_0816 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmath_1812 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_2179 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_1810 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Tmath_1811 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Tmath_0914 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_0320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmath_1023 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tmath_1024 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tmath_0214 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_2173 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:tmt00280]
D Tmath_0914 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmath_1879 Glu/Leu/Phe/Val dehydrogenase dimerization region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tmt00290]
D Tmath_0033 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tmath_0034 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tmath_0035 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Tmath_0037 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmath_0030 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmath_0031 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tmath_0036 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tmath_0914 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmath_1879 Glu/Leu/Phe/Val dehydrogenase dimerization region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Tmath_0032 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tmath_1610 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tmt00300]
D Tmath_1812 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_2179 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tmath_1227 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmath_0816 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmath_0815 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tmath_0814 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Tmath_2087 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tmath_1549 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tmath_1370 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tmath_1763 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tmath_1478 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmath_1477 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tmt00310]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_1968 Acetylornithine transaminase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
C 00220 Arginine biosynthesis [PATH:tmt00220]
D Tmath_0595 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Tmath_2084 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmath_2083 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmath_0148 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Tmath_0632 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_2085 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tmath_2086 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tmath_0596 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Tmath_1192 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_2089 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Tmath_2088 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Tmath_2090 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Tmath_2087 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tmt00330]
D Tmath_0533 Hydantoinase/oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Tmath_1045 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Tmath_1185 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Tmath_1184 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tmath_1201 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tmath_1968 Acetylornithine transaminase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Tmath_1698 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Tmath_1208 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Tmath_1126 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tmath_1127 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:tmt00340]
D Tmath_1799 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Tmath_1800 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Tmath_1792 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Tmath_1794 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Tmath_1795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Tmath_1793 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Tmath_1796 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmath_2169 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Tmath_1798 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Tmath_0502 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:tmt00350]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Tmath_0739 4-oxalocrotonate tautomerase K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:tmt00360]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmath_0739 4-oxalocrotonate tautomerase K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D Tmath_1698 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:tmt00380]
D Tmath_1021 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_1698 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tmt00400]
D Tmath_1028 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tmath_1416 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tmath_1026 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Tmath_1128 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Tmath_1110 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Tmath_1124 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Tmath_1030 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Tmath_1528 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Tmath_1423 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tmath_1422 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Tmath_1421 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Tmath_1419 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Tmath_1420 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Tmath_1417 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tmath_1418 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tmath_1197 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Tmath_2180 conserved hypothetical protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D Tmath_1029 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tmath_1027 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tmt00410]
D Tmath_0536 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Tmath_0537 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:tmt00430]
D Tmath_0194 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Tmath_1192 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Tmath_1339 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tmath_1338 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tmt00450]
D Tmath_1591 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmath_1414 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Tmath_1425 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Tmath_2204 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Tmath_1890 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tmath_0138 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tmath_0156 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tmt00460]
D Tmath_0257 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmath_0390 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Tmath_1791 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tmt00470]
D Tmath_1831 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tmath_0117 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_2122 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_0632 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tmath_0639 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tmath_1475 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmath_1370 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tmath_1763 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tmath_1092 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:tmt00480]
D Tmath_0443 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tmath_1723 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_1019 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_0229 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tmath_1020 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tmath_1184 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tmt00511]
D Tmath_1704 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_0246 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Tmath_1702 glycosyl hydrolase 38 domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmath_0389 glycoside hydrolase family 2 sugar binding protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tmt00542]
D Tmath_0189 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tmt00541]
D Tmath_0949 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_0766 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tmath_1711 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_0714 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tmath_1550 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Tmath_0724 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tmath_2146 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tmath_0190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmath_0719 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D Tmath_0718 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D Tmath_0235 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
C 00550 Peptidoglycan biosynthesis [PATH:tmt00550]
D Tmath_1472 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_2217 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_1638 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmath_2149 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tmath_1475 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmath_1478 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmath_0117 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_2122 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_1477 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tmath_1249 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tmath_1011 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_2104 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_1476 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmath_1473 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tmath_0351 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmath_1107 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmath_0876 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmath_1680 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tmath_1479 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tmath_1748 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D Tmath_1164 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_1179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0906 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0008 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Tmath_0007 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:tmt00552]
D Tmath_1011 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_2104 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_0189 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmath_1825 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tmath_0900 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Tmath_0046 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tmt00543]
D Tmath_0189 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmath_0115 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D Tmath_1941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tmt00730]
D Tmath_1820 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Tmath_0670 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Tmath_0554 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D Tmath_1489 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_2028 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_1488 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Tmath_0642 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Tmath_1147 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tmath_0672 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tmath_0674 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tmath_0671 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Tmath_1355 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tmath_1353 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Tmath_1913 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tmt00740]
D Tmath_0040 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tmath_0038 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tmath_0041 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Tmath_0039 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Tmath_1234 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Tmath_0672 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tmath_0674 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tmath_1160 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:tmt00750]
D Tmath_2178 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tmath_1314 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Tmath_1313 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tmt00760]
D Tmath_0853 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Tmath_1551 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Tmath_1189 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tmath_0379 5'-Nucleotidase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D Tmath_0898 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Tmath_0700 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Tmath_1537 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Tmath_1149 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:tmt00770]
D Tmath_0037 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tmath_0030 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tmath_0031 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tmath_0036 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tmath_0538 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Tmath_0537 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Tmath_2006 transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Tmath_1365 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Tmath_1343 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Tmath_0851 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Tmath_1834 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Tmath_0914 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tmath_0536 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tmt00780]
D Tmath_1328 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmath_1330 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0203 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmath_1660 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Tmath_1315 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Tmath_1745 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tmt00785]
D Tmath_1494 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Tmath_1493 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Tmath_0336 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0333 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tmath_0332 Glycine cleavage system P-protein-like protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tmath_0335 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmath_0334 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tmt00790]
D Tmath_1996 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Tmath_1994 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Tmath_1995 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Tmath_0789 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Tmath_0040 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tmath_1993 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tmath_0887 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tmath_1661 beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:tmt00670]
D Tmath_2012 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tmath_1142 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tmath_0511 Glutamate formimidoyltransferase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Tmath_1791 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tmath_0636 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tmath_0637 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmath_0502 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Tmath_1362 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tmath_0335 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tmath_1591 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tmath_1592 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tmt00860]
D Tmath_0910 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmath_0430 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Tmath_0437 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tmath_0433 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tmath_0431 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Tmath_0432 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Tmath_0434 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Tmath_0425 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Tmath_0428 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Tmath_0426 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Tmath_0427 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Tmath_0429 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Tmath_0422 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Tmath_0424 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D Tmath_0423 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D Tmath_0421 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Tmath_0412 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Tmath_0812 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Tmath_0413 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Tmath_0414 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Tmath_0418 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Tmath_0419 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Tmath_0417 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D Tmath_2067 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tmt00900]
D Tmath_1147 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tmath_1247 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Tmath_1947 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Tmath_2133 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Tmath_1945 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Tmath_1245 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Tmath_1200 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Tmath_1145 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tmath_1249 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Tmath_1822 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tmath_1823 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tmt00946]
D Tmath_0257 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmath_0390 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:tmt00311]
D Tmath_0250 Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D Tmath_1841 Peptidoglycan-binding domain 1 protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:tmt00332]
D Tmath_1126 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tmath_1127 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tmt00261]
D Tmath_1227 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tmath_0816 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tmath_0815 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tmath_0814 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tmt00521]
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0765 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Tmath_1742 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Tmath_0139 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:tmt00401]
D Tmath_1029 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Tmath_1423 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tmath_1422 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Tmath_1331 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmath_1330 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Tmath_1329 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tmt00999]
D Tmath_0555 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tmath_1110 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Tmath_0257 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Tmath_0390 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D Tmath_1092 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D Tmath_2008 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmath_2009 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation [PATH:tmt00627]
D Tmath_1698 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Tmath_1565 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tmt00625]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D Tmath_1318 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tmt00643]
D Tmath_1698 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:tmt00626]
D Tmath_2110 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tmt03020]
D Tmath_1905 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmath_1366 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tmt03010]
D Tmath_1254 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tmath_1927 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tmath_1906 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tmath_1916 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tmath_2266 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tmath_1919 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tmath_1898 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tmath_1934 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tmath_1907 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tmath_1908 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tmath_1920 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Tmath_1233 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tmath_1305 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Tmath_1924 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tmath_2264 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tmath_1929 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tmath_0922 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Tmath_0957 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tmath_1930 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tmath_1933 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tmath_1932 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Tmath_1921 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tmath_1918 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tmath_2260 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tmath_1899 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tmath_1923 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tmath_1915 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tmath_1926 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tmath_1904 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tmath_1917 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tmath_1301 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tmath_1525 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tmath_0892 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tmath_1928 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tmath_1931 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tmath_1922 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tmath_1764 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Tmath_0894 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tmath_1351 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tmath_1925 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tmath_0179 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tmath_1336 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Tmath_2287 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Tmath_1526 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tmath_1909 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tmath_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0067 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0066 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tmt00970]
D Tmath_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0069 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmath_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmath_R0045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tmath_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmath_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmath_R0072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0021 tRNA-His K14226 tRNA-His; tRNA His
D Tmath_R0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmath_R0068 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmath_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0023 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0063 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0074 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0047 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmath_R0061 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmath_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0042 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tmath_R0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmath_R0059 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmath_R0052 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0016 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_0910 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmath_1942 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmath_0652 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tmath_0653 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tmath_0651 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tmath_1096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmath_1087 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmath_0969 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Tmath_1530 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmath_0045 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmath_1940 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmath_0156 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmath_1362 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tmath_0787 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmath_0360 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmath_1432 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmath_1997 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmath_2120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmath_1944 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmath_1086 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmath_1523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmath_1522 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmath_2212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmath_1297 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tmt03060]
D Tmath_1914 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Tmath_1557 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tmath_1073 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmath_1074 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmath_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Tmath_2284 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmath_0586 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmath_1306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmath_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Tmath_1308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tmath_0044 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tmath_1391 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tmt04122]
D Tmath_1489 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_2028 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_1644 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tmath_1488 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Tmath_0552 thiamineS protein K03154 thiS; sulfur carrier protein
D Tmath_0554 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tmt03018]
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmath_1232 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tmath_0974 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmath_0178 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tmath_1218 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tmath_1101 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_0936 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmath_0625 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmath_1207 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tmath_1172 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Tmath_0155 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tmt03030]
D Tmath_1622 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmath_1243 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmath_0100 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmath_0146 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tmath_0921 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmath_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmath_2259 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tmath_1555 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_1209 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tmath_1295 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tmt03410]
D Tmath_0616 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Tmath_1569 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tmath_0140 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Tmath_0125 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tmath_1125 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tmath_1076 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tmt03420]
D Tmath_2139 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tmath_1751 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Tmath_1752 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Tmath_1747 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Tmath_0649 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tmt03430]
D Tmath_1204 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tmath_1519 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Tmath_0649 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmath_1143 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tmath_1144 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tmath_1076 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_1622 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmath_1243 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmath_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmath_0100 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmath_0921 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmath_0146 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tmt03440]
D Tmath_1076 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Tmath_0967 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tmath_0102 recombination protein RecR K06187 recR; recombination protein RecR
D Tmath_1220 recA protein K03553 recA; recombination protein RecA
D Tmath_1062 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tmath_1063 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tmath_1061 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tmath_1348 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tmath_0556 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Tmath_1622 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmath_1243 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmath_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmath_0100 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmath_0921 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmath_0146 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tmath_1364 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:tmt03450]
D Tmath_1842 Ku protein K10979 ku; DNA end-binding protein Ku
D Tmath_1843 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tmt02010]
D Tmath_1611 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tmath_1612 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Tmath_1613 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tmath_1760 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmath_0271 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmath_1955 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Tmath_1633 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Tmath_1632 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1954 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1953 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1631 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1708 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D Tmath_1707 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D Tmath_1706 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D Tmath_0244 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Tmath_0242 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein
D Tmath_0243 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein
D Tmath_0508 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Tmath_0507 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D Tmath_0506 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D Tmath_0804 extracellular solute-binding protein family 1 K17311 treS; trehalose transport system substrate-binding protein
D Tmath_0802 binding-protein-dependent transport systems inner membrane component K17312 treT; trehalose transport system permease protein
D Tmath_0803 binding-protein-dependent transport systems inner membrane component K17313 treU; trehalose transport system permease protein
D Tmath_0254 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D Tmath_0255 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D Tmath_0256 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein
D Tmath_1694 extracellular solute-binding protein family 1 K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D Tmath_1693 binding-protein-dependent transport systems inner membrane component K17235 araP; arabinooligosaccharide transport system permease protein
D Tmath_1692 binding-protein-dependent transport systems inner membrane component K17236 araQ; arabinooligosaccharide transport system permease protein
D Tmath_0512 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Tmath_0516 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Tmath_0517 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Tmath_0515 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Tmath_0265 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Tmath_0264 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Tmath_0263 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmath_0262 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D Tmath_0328 monosaccharide-transporting ATPase K10543 xylF; D-xylose transport system substrate-binding protein
D Tmath_0329 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D Tmath_0331 inner-membrane translocator K10544 xylH; D-xylose transport system permease protein
D Tmath_0330 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Tmath_1459 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tmath_1458 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Tmath_1456 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tmath_0577 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Tmath_0578 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Tmath_0579 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Tmath_0680 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmath_0679 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Tmath_0678 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Tmath_0677 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmath_0676 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmath_1377 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Tmath_1376 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Tmath_1375 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D Tmath_0393 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Tmath_0391 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Tmath_0392 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tmath_0439 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Tmath_0296 conserved hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D Tmath_0438 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tmath_0297 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Tmath_0440 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tmath_0295 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tmath_0441 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tmath_0294 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tmath_0785 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Tmath_1901 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Tmath_1903 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmath_1902 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmath_1757 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Tmath_1758 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tmath_0819 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_0818 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_2107 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_2106 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:tmt02060]
D Tmath_1964 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Tmath_1624 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Tmath_0525 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Tmath_0524 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Tmath_0377 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D Tmath_0375 PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D Tmath_0647 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0662 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0372 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0645 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0663 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0371 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0646 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0664 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0369 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0222 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tmath_0224 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Tmath_0225 PTS system sorbose subfamily IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D Tmath_0223 phosphotransferase system PTS sorbose-specific IIC subunit K17466 dgaC; D-glucosaminate PTS system EIIC component
D Tmath_0211 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Tmath_0212 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Tmath_0213 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Tmath_0343 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Tmath_0342 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Tmath_2158 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Tmath_2160 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Tmath_2159 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tmt03070]
D Tmath_1073 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmath_1074 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmath_1557 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tmath_1914 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Tmath_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Tmath_2284 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmath_0586 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmath_1308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tmath_1306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmath_0078 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tmt02020]
D Tmath_1460 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmath_1461 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Tmath_1459 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tmath_0948 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tmath_0947 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR
D Tmath_2142 HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmath_0566 flagellin domain protein K02406 fliC; flagellin
D Tmath_1257 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D Tmath_0604 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Tmath_2221 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Tmath_2222 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D Tmath_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmath_2013 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Tmath_0175 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Tmath_1153 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Tmath_1962 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tmath_0610 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tmath_0565 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Tmath_1516 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tmath_0067 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D Tmath_0062 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tmath_0064 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Tmath_1323 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_1564 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tmath_1114 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D Tmath_1202 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmath_2233 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0501 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0575 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_1260 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1059 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1261 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmath_1272 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmath_1262 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmath_2258 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_1003 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_0509 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Tmath_0327 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tmath_0510 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tmath_0190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tmath_0559 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tmt02024]
D Tmath_1207 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tmath_1423 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tmath_1422 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Tmath_0680 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmath_0679 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Tmath_0678 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Tmath_0677 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmath_0676 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmath_1741 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tmath_2258 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_1003 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_0038 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tmath_0610 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tmath_0384 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_0854 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_2114 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_2115 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmath_0385 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmath_2116 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmath_0386 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmath_0387 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmath_2117 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmath_2118 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmath_0388 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmath_2284 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tmath_1557 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tmath_1914 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Tmath_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Tmath_0586 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmath_1308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tmath_1306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmath_0175 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Tmath_1153 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Tmath_2061 helix-turn-helix domain protein K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tmt02030]
D Tmath_2233 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0501 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0575 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0265 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Tmath_1261 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmath_1260 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1059 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1272 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmath_1259 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tmath_1262 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmath_1258 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tmath_1202 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmath_1285 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmath_1274 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmath_1273 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Tmath_0604 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Tmath_0605 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tmt02040]
D Tmath_1287 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tmath_1286 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmath_1285 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmath_1284 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Tmath_1283 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmath_1282 putative sensor with HAMP domain K02413 fliJ; flagellar protein FliJ
D Tmath_1280 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Tmath_1275 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Tmath_1274 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmath_1273 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Tmath_1271 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tmath_1270 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmath_1269 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmath_1268 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmath_1266 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmath_1267 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmath_1289 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tmath_1288 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tmath_1279 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tmath_1277 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Tmath_0200 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tmath_0201 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tmath_0202 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tmath_0561 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Tmath_0562 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tmath_0566 flagellin domain protein K02406 fliC; flagellin
D Tmath_0572 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Tmath_0573 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tmath_0604 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Tmath_0605 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Tmath_0559 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tmath_1554 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Tmath_1564 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tmath_1257 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Tmath_1591 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tmt01501]
D Tmath_0275 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tmath_1841 Peptidoglycan-binding domain 1 protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Tmath_0351 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmath_1107 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmath_0876 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tmt01502]
D Tmath_0117 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_2122 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_1831 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tmath_1477 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tmath_1476 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmath_1473 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tmt01503]
D Tmath_0655 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_2026 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_1888 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_2142 HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tmt01000]
C 01001 Protein kinases [BR:tmt01001]
D Tmath_1356 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Tmath_0861 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Tmath_1460 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmath_0948 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tmath_2221 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Tmath_1516 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tmath_2013 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Tmath_1819 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Tmath_1261 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmath_0509 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tmt01009]
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_1357 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:tmt01002]
D Tmath_1391 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Tmath_0069 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_1115 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_0927 spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D Tmath_1466 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D Tmath_1002 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Tmath_0627 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmath_1321 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tmath_0634 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tmath_1867 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tmath_0569 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tmath_0905 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tmath_1004 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Tmath_0610 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tmath_2154 Abortive infection protein K07052 K07052; CAAX protease family protein
D Tmath_0476 Abortive infection protein K07052 K07052; CAAX protease family protein
D Tmath_1025 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Tmath_1789 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Tmath_1549 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tmath_0882 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D Tmath_1912 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Tmath_1129 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Tmath_0823 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D Tmath_1771 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_2014 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_0168 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_0883 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D Tmath_1246 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Tmath_2142 HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmath_0806 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-]
D Tmath_0619 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-]
D Tmath_1164 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_1179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0906 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0686 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Tmath_0688 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tmath_0044 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tmath_1755 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Tmath_2176 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Tmath_0833 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Tmath_2271 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Tmath_1152 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D Tmath_1292 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Tmath_1520 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Tmath_1106 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:tmt01003]
D Tmath_0317 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D Tmath_0351 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmath_0115 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D Tmath_1825 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tmath_0189 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tmath_1807 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tmt01005]
D Tmath_0952 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Tmath_0189 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tmt01011]
D Tmath_1472 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_2217 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tmath_1638 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tmath_2149 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tmath_1475 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tmath_1478 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tmath_0117 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_2122 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tmath_1831 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tmath_0639 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tmath_1476 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tmath_1473 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tmath_1011 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_2104 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tmath_0204 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tmath_0351 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tmath_1107 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmath_0876 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tmath_1680 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tmath_1479 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tmath_1748 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D Tmath_1164 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_1179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0906 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tmath_0882 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D Tmath_1104 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Tmath_2191 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tmath_2125 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tmath_1032 cell wall hydrolase SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tmath_2057 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Tmath_0196 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Tmath_0655 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_2026 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_1888 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tmt01004]
D Tmath_1331 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tmath_1333 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tmath_1328 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tmath_1330 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tmath_0203 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tmath_1332 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Tmath_1741 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tmath_1334 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tmath_1446 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1582 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tmath_1199 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tmath_1869 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tmt01006]
D Tmath_1145 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tmath_1249 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tmath_1206 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tmath_2067 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:tmt01007]
D Tmath_0910 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmath_1942 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmath_2212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmath_1297 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tmath_1940 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmath_2120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmath_0156 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmath_1432 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmath_0787 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmath_0360 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmath_1997 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmath_1087 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmath_1086 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmath_0969 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Tmath_0045 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmath_1944 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmath_1530 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmath_1096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmath_1523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmath_1522 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmath_1214 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tmath_0288 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D Tmath_0340 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D Tmath_1797 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tmath_2087 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tmath_1968 Acetylornithine transaminase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Tmath_0437 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tmath_0914 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tmt00194]
D Tmath_0698 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tmath_0697 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tmath_0696 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tmath_0695 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tmath_0694 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tmath_0693 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tmath_0692 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tmath_0691 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tmt03000]
D Tmath_1703 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Tmath_0134 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Tmath_0396 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Tmath_2161 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D Tmath_0198 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Tmath_0260 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmath_0544 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmath_0383 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmath_0795 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmath_0801 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Tmath_1733 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Tmath_1684 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D Tmath_0518 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Tmath_0759 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D Tmath_1100 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Tmath_0394 ferric uptake regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D Tmath_0313 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Tmath_1567 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Tmath_2258 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_1003 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tmath_1093 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Tmath_2033 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Tmath_1956 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Tmath_1745 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Tmath_2061 helix-turn-helix domain protein K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D Tmath_1837 helix-turn-helix domain protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D Tmath_2148 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D Tmath_0221 PTS system transcriptional activator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D Tmath_0128 putative sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tmath_1759 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator
D Tmath_0606 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D Tmath_1290 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Tmath_1497 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D Tmath_0052 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D Tmath_0298 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Tmath_1830 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tmath_0526 transcriptional antiterminator, BglG K03480 glcT; transcriptional antiterminator
D Tmath_0643 PTS modulated transcriptional regulator, MtlR family K03483 mtlR; mannitol operon transcriptional activator
D Tmath_0376 transcriptional antiterminator, BglG K03483 mtlR; mannitol operon transcriptional activator
D Tmath_0341 PTS modulated transcriptional regulator, MtlR family K03483 mtlR; mannitol operon transcriptional activator
D Tmath_1089 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Tmath_1490 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Tmath_0152 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D Tmath_2137 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D Tmath_2275 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tmath_2277 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tmath_1783 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator
D Tmath_1150 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Tmath_0934 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Tmath_1960 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D Tmath_1410 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Tmath_0846 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Tmath_1563 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator
D Tmath_1388 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tmath_1462 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Tmath_0731 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Tmath_1482 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tmt03021]
D Tmath_1905 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmath_1366 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tmath_1554 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Tmath_1407 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tmath_0848 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tmath_1464 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tmath_1465 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tmath_1108 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tmath_1167 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tmath_1936 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D Tmath_0164 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03093 sigI; RNA polymerase sigma-I factor
D Tmath_1564 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tmath_1257 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D Tmath_1241 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tmath_1141 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Tmath_0764 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Tmath_0861 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Tmath_0762 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Tmath_1998 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Tmath_0178 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tmt03019]
D Tmath_0886 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tmath_1327 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmath_1101 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tmath_1218 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tmath_0974 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmath_1232 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tmath_0178 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tmath_1620 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tmath_0936 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmath_0625 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmath_1207 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tmath_1172 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Tmath_0155 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Tmath_0565 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Tmath_1636 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tmt03011]
D Tmath_1254 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tmath_1927 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tmath_1906 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tmath_1916 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tmath_2266 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tmath_1919 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tmath_1898 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tmath_1934 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tmath_1907 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tmath_1908 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tmath_1920 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Tmath_1233 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tmath_1305 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Tmath_1924 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tmath_2264 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tmath_1929 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tmath_0922 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Tmath_0957 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tmath_1930 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tmath_1933 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tmath_1932 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Tmath_1921 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tmath_1918 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tmath_2260 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tmath_1899 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tmath_1923 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tmath_1915 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tmath_1926 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tmath_1904 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tmath_1917 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tmath_1301 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tmath_1525 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tmath_0892 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tmath_1928 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tmath_1931 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tmath_1922 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tmath_0894 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tmath_1351 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tmath_1925 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tmath_0179 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tmath_1336 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Tmath_2287 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Tmath_1526 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tmath_1909 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tmath_1764 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Tmath_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0066 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0067 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tmt03009]
D Tmath_1327 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmath_0965 GTP-binding protein Era K03595 era; GTPase
D Tmath_0896 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Tmath_1241 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tmath_1141 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Tmath_0764 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Tmath_0110 RNA-binding S4 domain protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Tmath_0159 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Tmath_1359 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Tmath_1344 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Tmath_0939 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Tmath_2280 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tmath_1481 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Tmath_0150 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Tmath_1148 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Tmath_1938 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Tmath_2213 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Tmath_2214 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Tmath_1380 protein of unknown function Met10 K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Tmath_1358 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Tmath_1617 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Tmath_1182 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Tmath_1390 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Tmath_1577 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Tmath_0600 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Tmath_1303 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Tmath_1223 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Tmath_0479 protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D Tmath_0938 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Tmath_0886 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tmath_1098 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Tmath_1939 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D Tmath_1355 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tmath_1447 ribosome-associated GTPase EngA K03977 engA; GTPase
D Tmath_1300 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D Tmath_1050 GTP-binding proten HflX K03665 hflX; GTPase
D Tmath_0185 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tmath_1078 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tmath_1237 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Tmath_1242 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Tmath_0003 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D Tmath_0901 iojap-like protein K09710 ybeB; ribosome-associated protein
D Tmath_0963 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Tmath_0580 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Tmath_1486 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Tmath_1337 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tmt03016]
D Tmath_0763 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Tmath_0910 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmath_1944 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tmath_1432 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tmath_0360 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmath_0156 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tmath_2120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmath_1997 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tmath_1087 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmath_1096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tmath_0969 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Tmath_1530 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tmath_0045 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tmath_1940 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tmath_0787 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tmath_1086 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tmath_1523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tmath_1522 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tmath_2212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmath_1297 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tmath_1079 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Tmath_0956 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tmath_0540 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Tmath_1900 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Tmath_1235 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Tmath_1489 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_2028 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_0185 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tmath_1206 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tmath_2282 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Tmath_2281 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tmath_2286 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Tmath_R0053 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Tmath_0656 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Tmath_1374 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Tmath_1942 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tmath_0098 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Tmath_0380 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Tmath_1203 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Tmath_0955 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Tmath_1302 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Tmath_1553 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Tmath_0299 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Tmath_1524 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Tmath_1644 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tmath_0553 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Tmath_1379 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Tmath_1066 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Tmath_1993 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tmath_0887 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tmath_1570 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Tmath_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Tmath_1067 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Tmath_1488 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Tmath_2016 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Tmath_0599 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Tmath_0601 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Tmath_0598 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Tmath_1088 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Tmath_1340 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D Tmath_0974 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tmath_1232 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tmt03012]
D Tmath_1238 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Tmath_1527 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Tmath_0603 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Tmath_1253 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tmath_1935 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmath_1963 translation elongation factor G K02355 fusA; elongation factor G
D Tmath_0183 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Tmath_1251 ribosome recycling factor K02838 frr; ribosome recycling factor
D Tmath_0182 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Tmath_2141 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Tmath_1910 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Tmath_1130 translation elongation factor P K02356 efp; elongation factor P
D Tmath_0587 hypothetical protein K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tmt03110]
D Tmath_1957 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Tmath_0687 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Tmath_1291 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Tmath_0936 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmath_0625 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmath_0937 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tmath_1535 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Tmath_0935 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Tmath_2155 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Tmath_2208 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Tmath_0624 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Tmath_2142 HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D Tmath_1771 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_2014 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_0168 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tmath_0691 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tmath_1602 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Tmath_1601 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Tmath_2138 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D Tmath_1090 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:tmt04131]
D Tmath_0771 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tmath_1033 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Tmath_1702 glycosyl hydrolase 38 domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Tmath_1562 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmath_2073 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Tmath_1619 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tmt03032]
D Tmath_1209 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tmath_2059 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tmath_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmath_2259 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tmath_2226 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Tmath_1555 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_1622 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmath_1243 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmath_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmath_0921 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmath_0146 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tmath_0100 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmath_1295 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tmath_0010 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tmath_0009 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tmath_1293 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tmt03036]
D Tmath_1327 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tmath_2059 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tmath_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tmath_1207 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tmath_1309 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Tmath_1174 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Tmath_1175 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Tmath_1468 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tmath_2051 Septum formation initiator K13052 divIC; cell division protein DivIC
D Tmath_1758 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tmath_1224 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Tmath_1480 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Tmath_1471 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Tmath_1474 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tmath_1757 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Tmath_1467 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmath_1521 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Tmath_0655 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_2026 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_1888 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tmath_0877 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tmath_0061 Cobyrinic acid ac-diamide synthase K03609 minD; septum site-determining protein MinD
D Tmath_0878 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tmath_0879 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tmath_1434 DivIVA domain protein K04074 divIVA; cell division initiation protein
D Tmath_1437 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D Tmath_0873 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0199 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0874 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Tmath_0875 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Tmath_0880 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Tmath_2276 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Tmath_2275 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tmath_2277 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tmath_2281 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tmath_2280 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tmath_1163 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Tmath_2060 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D Tmath_0165 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tmath_0689 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D Tmath_1625 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tmt03400]
D Tmath_2109 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Tmath_0616 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Tmath_1569 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tmath_2278 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Tmath_1578 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Tmath_1229 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Tmath_0125 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tmath_0140 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Tmath_1125 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tmath_1076 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tmath_0650 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tmath_1751 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Tmath_1752 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Tmath_1747 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Tmath_0649 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tmath_1905 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tmath_1366 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tmath_2139 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tmath_1204 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tmath_1519 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Tmath_1143 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tmath_1144 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tmath_1622 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tmath_1243 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Tmath_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tmath_0921 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tmath_0146 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tmath_0100 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_0556 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Tmath_1220 recA protein K03553 recA; recombination protein RecA
D Tmath_1062 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tmath_1063 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tmath_1061 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tmath_1364 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Tmath_0311 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Tmath_0310 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Tmath_1950 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Tmath_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Tmath_1348 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tmath_0967 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tmath_0102 recombination protein RecR K06187 recR; recombination protein RecR
D Tmath_1151 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Tmath_0309 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Tmath_0308 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Tmath_0022 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmath_2184 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmath_1842 Ku protein K10979 ku; DNA end-binding protein Ku
D Tmath_1843 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Tmath_0010 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tmath_0009 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tmath_1293 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tmath_2059 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tmath_0300 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Tmath_1219 regulatory protein RecX K03565 recX; regulatory protein
D Tmath_2097 PHP domain protein K02347 polX; DNA polymerase (family X)
D Tmath_1966 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tmath_1236 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tmt03029]
D Tmath_1238 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Tmath_1527 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Tmath_1253 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tmath_1935 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmath_1963 translation elongation factor G K02355 fusA; elongation factor G
D Tmath_0965 GTP-binding protein Era K03595 era; GTPase
D Tmath_2212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tmath_0360 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tmath_1087 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tmath_0969 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Tmath_2120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tmath_0652 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tmath_0653 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tmath_0651 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tmath_2265 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tmath_0936 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmath_0935 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Tmath_0625 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmath_2208 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Tmath_0624 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Tmath_0937 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tmath_1489 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_2028 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_0165 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tmath_2284 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tmt02000]
D Tmath_0819 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_0818 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_2107 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_2106 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tmath_1611 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tmath_1612 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Tmath_1613 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tmath_0703 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Tmath_0701 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Tmath_0702 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Tmath_1760 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmath_0271 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Tmath_1676 extracellular solute-binding protein family 1 K25086 musE; maltose transport system substrate-binding protein
D Tmath_1675 binding-protein-dependent transport systems inner membrane component K25087 musF; maltose transport system permease protein
D Tmath_1674 binding-protein-dependent transport systems inner membrane component K25088 musG; maltose transport system permease protein
D Tmath_1955 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Tmath_1633 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Tmath_1632 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1954 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1953 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_1631 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Tmath_0508 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Tmath_0507 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D Tmath_0506 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D Tmath_0804 extracellular solute-binding protein family 1 K17311 treS; trehalose transport system substrate-binding protein
D Tmath_0802 binding-protein-dependent transport systems inner membrane component K17312 treT; trehalose transport system permease protein
D Tmath_0803 binding-protein-dependent transport systems inner membrane component K17313 treU; trehalose transport system permease protein
D Tmath_0254 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D Tmath_0255 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D Tmath_0256 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein
D Tmath_1708 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D Tmath_1707 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D Tmath_1706 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D Tmath_0244 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Tmath_0242 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein
D Tmath_0243 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein
D Tmath_0328 monosaccharide-transporting ATPase K10543 xylF; D-xylose transport system substrate-binding protein
D Tmath_0329 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D Tmath_0331 inner-membrane translocator K10544 xylH; D-xylose transport system permease protein
D Tmath_0330 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Tmath_0265 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Tmath_0264 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Tmath_0263 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Tmath_1694 extracellular solute-binding protein family 1 K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D Tmath_1693 binding-protein-dependent transport systems inner membrane component K17235 araP; arabinooligosaccharide transport system permease protein
D Tmath_1692 binding-protein-dependent transport systems inner membrane component K17236 araQ; arabinooligosaccharide transport system permease protein
D Tmath_0512 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Tmath_0516 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Tmath_0517 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Tmath_0515 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Tmath_0359 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Tmath_0358 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Tmath_0797 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmath_0268 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmath_1681 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmath_1701 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Tmath_0798 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmath_0269 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmath_1700 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Tmath_0270 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmath_0799 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmath_1699 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Tmath_1459 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tmath_1458 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Tmath_1456 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tmath_0577 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Tmath_0578 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Tmath_0579 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Tmath_0680 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tmath_0679 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Tmath_0678 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Tmath_0677 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tmath_0676 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tmath_1377 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Tmath_1376 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Tmath_1375 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D Tmath_0384 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_0854 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_2114 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tmath_2115 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmath_0385 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tmath_2116 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmath_0386 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tmath_0387 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmath_2117 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tmath_2118 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmath_0388 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tmath_1658 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tmath_1657 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Tmath_1656 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tmath_0409 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Tmath_0410 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Tmath_0411 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Tmath_0393 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Tmath_0391 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Tmath_0392 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tmath_0439 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D Tmath_0296 conserved hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D Tmath_0440 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tmath_0295 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tmath_0438 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tmath_0297 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Tmath_0441 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tmath_0294 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tmath_0785 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Tmath_1901 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Tmath_1903 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmath_1902 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tmath_1805 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein
D Tmath_1806 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Tmath_1804 ABC-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component
D Tmath_1757 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Tmath_1758 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tmath_0456 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D Tmath_0995 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D Tmath_0994 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D Tmath_0455 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D Tmath_0993 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D Tmath_0454 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D Tmath_0478 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_0485 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_0486 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_1974 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_1652 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_2077 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tmath_1653 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_2078 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_0477 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_0484 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_0841 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_1975 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tmath_1081 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Tmath_0304 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Tmath_0985 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmath_1082 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmath_0303 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmath_0492 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tmath_2207 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Tmath_1615 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Tmath_0301 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Tmath_1964 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Tmath_1624 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Tmath_0525 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Tmath_0524 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Tmath_2158 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Tmath_0377 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D Tmath_0375 PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D Tmath_0647 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0662 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0372 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Tmath_0645 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0663 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0371 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Tmath_0646 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0664 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0369 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Tmath_0211 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Tmath_0212 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Tmath_0213 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Tmath_0222 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tmath_0224 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Tmath_0225 PTS system sorbose subfamily IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D Tmath_0223 phosphotransferase system PTS sorbose-specific IIC subunit K17466 dgaC; D-glucosaminate PTS system EIIC component
D Tmath_0343 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Tmath_0342 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Tmath_2159 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Tmath_1774 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D Tmath_1782 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D Tmath_1324 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Tmath_1405 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Tmath_2268 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Tmath_0706 magnesium transporter K06213 mgtE; magnesium transporter
D Tmath_0604 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Tmath_0605 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Tmath_0103 CrcB protein K06199 crcB; fluoride exporter
D Tmath_0104 CrcB protein K06199 crcB; fluoride exporter
D Tmath_2162 S-layer domain protein K21449 ata; trimeric autotransporter adhesin
D Tmath_2005 spore germination protein K06296 gerKB; spore germination protein KB
D Tmath_2128 spore germination protein K06311 yndE; spore germination protein
D Tmath_0184 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Tmath_0230 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Tmath_0231 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Tmath_0129 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease
D Tmath_2250 uracil-xanthine permease K02824 uraA; uracil permease
D Tmath_0628 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Tmath_2074 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Tmath_2239 Chromate transporter K07240 chrA; chromate transporter
D Tmath_2240 Chromate transporter K07240 chrA; chromate transporter
D Tmath_0735 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein
D Tmath_1951 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Tmath_1788 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D Tmath_0641 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D Tmath_0204 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tmath_0493 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Tmath_1616 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Tmath_0361 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Tmath_0362 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Tmath_0597 membrane protein-like protein K23675 fmnP; riboflavin transporter
D Tmath_2105 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D Tmath_0585 conserved hypothetical protein K16788 niaX; niacin transporter
D Tmath_0498 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Tmath_1474 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tmath_1033 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Tmath_0761 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Tmath_1186 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tmath_2010 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Tmath_2008 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Tmath_2009 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Tmath_1043 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Tmath_0290 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Tmath_0291 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:tmt02044]
D Tmath_0069 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_1115 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_1114 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D Tmath_1111 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Tmath_1113 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Tmath_1121 cell division protein FtsA K02662 pilM; type IV pilus assembly protein PilM
D Tmath_1122 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Tmath_1123 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Tmath_1112 twitching motility protein K02669 pilT; twitching motility protein PilT
D Tmath_0067 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D Tmath_0062 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tmath_0064 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Tmath_1436 protein of unknown function YGGT K02221 yggT; YggT family protein
D Tmath_0907 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Tmath_0188 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tmath_0920 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Tmath_2229 beta-lactamase domain protein K02238 comEC; competence protein ComEC
D Tmath_1120 Late competence development protein ComFB K02241 comFB; competence protein ComFB
D Tmath_1266 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmath_1267 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmath_1429 flagellar protein FhlB-like protein K04061 flhB2; flagellar biosynthesis protein
D Tmath_1286 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmath_1284 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Tmath_1283 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmath_1273 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Tmath_1271 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tmath_1270 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmath_1269 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmath_1268 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmath_0078 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Tmath_0586 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tmath_1073 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Tmath_1074 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Tmath_1557 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tmath_1914 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Tmath_1306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tmath_1308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tmath_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Tmath_2284 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tmt02042]
C 02022 Two-component system [BR:tmt02022]
D Tmath_1460 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tmath_1461 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Tmath_0948 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tmath_0947 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR
D Tmath_2221 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Tmath_2222 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D Tmath_1516 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tmath_2013 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Tmath_0175 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Tmath_1153 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Tmath_0608 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Tmath_1819 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Tmath_1261 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmath_1272 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmath_1262 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmath_0509 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Tmath_0327 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tmath_0510 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tmath_0822 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:tmt02035]
D Tmath_1261 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tmath_1260 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1059 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tmath_1259 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tmath_1258 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tmath_1202 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tmath_1262 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tmath_1272 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tmath_2233 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0501 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_0575 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Tmath_1284 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Tmath_1283 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tmath_1282 putative sensor with HAMP domain K02413 fliJ; flagellar protein FliJ
D Tmath_1271 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tmath_1270 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tmath_1269 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tmath_1268 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tmath_1266 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tmath_1267 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tmath_1285 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tmath_1274 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tmath_1273 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Tmath_1286 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tmath_1275 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Tmath_1287 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tmath_1280 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Tmath_1289 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tmath_1288 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tmath_1279 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tmath_0200 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tmath_0201 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tmath_0202 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tmath_1277 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Tmath_0561 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Tmath_0562 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tmath_0566 flagellin domain protein K02406 fliC; flagellin
D Tmath_0572 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Tmath_0573 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tmath_1257 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D Tmath_0604 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Tmath_0605 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Tmath_0564 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW
D Tmath_0559 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tmath_0571 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D Tmath_1281 MgtE intracellular region K02383 flbB; flagellar protein FlbB
D Tmath_1276 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D Tmath_1265 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Tmath_1264 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Tmath_1112 twitching motility protein K02669 pilT; twitching motility protein PilT
D Tmath_1114 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D Tmath_1111 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Tmath_1113 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Tmath_0069 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_1115 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tmath_1123 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Tmath_1122 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Tmath_1121 cell division protein FtsA K02662 pilM; type IV pilus assembly protein PilM
D Tmath_0067 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D Tmath_0062 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tmt04812]
D Tmath_1739 Extradiol ring-cleavage dioxygenase class III protein subunit B K06990 MEMO1; MEMO1 family protein
D Tmath_0873 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0199 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0071 StbA family protein K18640 parM; plasmid segregation protein ParM
D Tmath_1467 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmath_1468 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tmath_0877 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tmath_0061 Cobyrinic acid ac-diamide synthase K03609 minD; septum site-determining protein MinD
D Tmath_0878 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tmath_0879 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tmath_2276 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Tmath_2275 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tmath_2277 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tmt04147]
D Tmath_1558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tmath_1562 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tmath_1561 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tmath_1619 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tmath_1789 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Tmath_0312 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Tmath_0625 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tmath_0936 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tmath_1594 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tmath_0626 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tmath_1935 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tmath_0956 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tmath_0320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Tmath_1741 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tmath_0739 4-oxalocrotonate tautomerase K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D Tmath_1913 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tmath_1077 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Tmath_2083 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tmath_2084 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tmath_1712 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Tmath_1781 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Tmath_1325 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0821 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tmath_0433 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tmath_0214 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_2173 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tmath_0637 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tmath_1495 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_0337 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tmath_1020 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tmath_1560 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tmath_2073 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tmt02048]
D Tmath_0022 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmath_2184 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Tmath_2183 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Tmath_0021 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Tmath_0024 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Tmath_2196 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Tmath_0027 CRISPR-associated CXXC_CXXC protein Cst1 K19088 cst1; CRISPR-associated protein Cst1
D Tmath_0026 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2
D Tmath_0023 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tmath_1785 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tmath_2185 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tmath_0025 CRISPR-associated protein Cas5 family K19090 cas5t; CRISPR-associated protein Cas5t
D Tmath_2200 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Tmath_0028 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Tmath_2199 CRISPR-associated protein, TM1802 family K19114 csh1; CRISPR-associated protein Csh1
D Tmath_2198 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Tmath_2197 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h
D Tmath_0745 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Tmath_0751 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Tmath_0752 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3
D Tmath_0748 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Tmath_0749 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Tmath_0750 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Tmath_1861 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Tmath_1863 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Tmath_1864 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Tmath_1395 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Tmath_1846 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tmath_1829 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tmath_2082 SpoVT/AbrB domain protein K07172 mazE; antitoxin MazE
D Tmath_1830 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tmath_0436 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D Tmath_1410 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Tmath_0846 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Tmath_1467 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tmath_0873 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0199 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Tmath_0910 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tmath_1489 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_2028 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tmath_1858 SMC domain protein K19171 dndD; DNA sulfur modification protein DndD
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:tmt04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tmt01504]
D Tmath_1841 Peptidoglycan-binding domain 1 protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tmt00537]
D Tmath_1789 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tmt03100]
D Tmath_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0069 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tmath_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tmath_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tmath_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmath_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tmath_R0045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tmath_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmath_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tmath_R0072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tmath_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tmath_R0021 tRNA-His K14226 tRNA-His; tRNA His
D Tmath_R0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmath_R0068 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tmath_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tmath_R0027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0023 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tmath_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0063 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0074 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tmath_R0047 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmath_R0061 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tmath_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tmath_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tmath_R0071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tmath_R0042 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tmath_R0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmath_R0059 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tmath_R0052 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0016 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tmath_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tmath_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0067 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tmath_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0066 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tmath_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Tmath_R0053 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Tmath_R0033 ssrA; tmRNA as predicted by Rfam (RF00023), score 222.04 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Tmath_1400 Aldehyde reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Tmath_0756 Aldehyde reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Tmath_0350 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Tmath_1402 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Tmath_1999 Shikimate/quinate 5-dehydrogenase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D Tmath_0903 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D Tmath_0029 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D Tmath_0867 conserved hypothetical protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D Tmath_0868 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Tmath_0869 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Tmath_2065 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Tmath_0613 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Tmath_2095 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Tmath_1017 arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Tmath_1650 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmath_1736 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmath_1576 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tmath_0796 glycoside hydrolase family 65 central catalytic K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D Tmath_0112 glycosidase related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Tmath_0113 glycosidase related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Tmath_1670 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D Tmath_0779 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Tmath_1543 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Tmath_2068 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Tmath_1349 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Tmath_0971 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Tmath_1883 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Tmath_1166 putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D Tmath_1744 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Tmath_1958 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D Tmath_1010 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Tmath_1618 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Tmath_2017 stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D Tmath_1215 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Tmath_1109 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Tmath_2261 phosphoesterase RecJ domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D Tmath_0962 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Tmath_0157 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Tmath_0247 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Tmath_0251 Cellulose 1,4-beta-cellobiosidase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Tmath_1695 S-layer domain protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Tmath_0248 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Tmath_1363 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Tmath_0279 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Tmath_1784 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D Tmath_1440 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Tmath_1833 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Tmath_0778 PP-loop domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Tmath_0780 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Tmath_0781 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Tmath_2270 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D Tmath_0170 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Tmath_0169 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Tmath_0174 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Tmath_2075 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Tmath_0770 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Tmath_2032 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Tmath_2103 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D Tmath_1992 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D Tmath_1572 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin
D Tmath_0171 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Tmath_0172 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Tmath_0173 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Tmath_2203 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tmath_0403 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tmath_1608 NADH/Ubiquinone/plastoquinone (complex I) K14086 echA; ech hydrogenase subunit A
D Tmath_1607 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B
D Tmath_1606 NADH ubiquinone oxidoreductase 20 kDa subunit K14088 echC; ech hydrogenase subunit C
D Tmath_1605 NADH dehydrogenase (ubiquinone) 30 kDa subunit K14089 echD; ech hydrogenase subunit D
D Tmath_1604 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E
D Tmath_1603 4Fe-4S ferredoxin iron-sulfur binding domain protein K14091 echF; ech hydrogenase subunit F
D Tmath_1168 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Tmath_1347 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Tmath_1438 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Tmath_0809 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D Tmath_1075 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Tmath_1536 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Tmath_0588 Tex-like protein K06959 tex; protein Tex
D Tmath_1368 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
D Tmath_0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D Tmath_2050 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D Tmath_1959 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator
D Tmath_0685 trigger factor K03545 tig; trigger factor
D Tmath_0975 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Tmath_1599 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Tmath_1598 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Tmath_1597 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Tmath_1389 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D Tmath_1600 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Tmath_1299 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D Tmath_0872 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Tmath_1296 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Tmath_1294 DNA protecting protein DprA K04096 smf; DNA processing protein
D Tmath_1581 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Tmath_1404 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase
D Tmath_1856 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Tmath_0101 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Tmath_0847 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family
D Tmath_2181 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Tmath_0366 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Tmath_2237 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
C 99978 Cell growth
D Tmath_1012 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Tmath_0107 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Tmath_1588 conserved hypothetical protein K06333 cotJB; spore coat protein JB
D Tmath_1589 manganese containing catalase K06334 cotJC; spore coat protein JC
D Tmath_2283 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D Tmath_0153 nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D Tmath_0154 nucleoside recognition domain protein K06374 spmB; spore maturation protein B
D Tmath_1165 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Tmath_1162 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D Tmath_1453 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Tmath_0928 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Tmath_2126 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D Tmath_1132 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D Tmath_1133 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D Tmath_1134 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D Tmath_1135 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D Tmath_1136 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D Tmath_1137 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D Tmath_1138 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D Tmath_1139 conserved hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D Tmath_1444 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D Tmath_1511 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D Tmath_1169 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D Tmath_1170 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D Tmath_1171 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D Tmath_2147 SpoVG family protein K06412 spoVG; stage V sporulation protein G
D Tmath_1212 stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D Tmath_1311 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Tmath_1216 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Tmath_0716 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D Tmath_1345 small acid-soluble spore protein alpha/beta type K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D Tmath_0793 small acid-soluble spore protein alpha/beta type K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D Tmath_2123 conserved hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D Tmath_1571 small acid-soluble spore protein alpha/beta type K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D Tmath_1013 small, acid-soluble spore protein I K06426 sspI; small acid-soluble spore protein I (minor)
D Tmath_0365 small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D Tmath_2136 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D Tmath_0960 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D Tmath_2004 GerA spore germination protein K06295 gerKA; spore germination protein KA
D Tmath_2003 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D Tmath_2127 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D Tmath_2129 GerA spore germination protein K06310 yndD; spore germination protein
D Tmath_2124 germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D Tmath_1896 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Tmath_0857 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Tmath_0940 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Tmath_0961 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Tmath_1083 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Tmath_0302 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D Tmath_0675 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Tmath_1455 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Tmath_0305 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Tmath_0306 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Tmath_0494 protein of unknown function DUF1648 K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Tmath_1884 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Tmath_1743 PHP domain protein K04477 ycdX; putative hydrolase
D Tmath_1637 PHP domain protein K04477 ycdX; putative hydrolase
D Tmath_1583 Patatin K07001 K07001; NTE family protein
D Tmath_2206 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Tmath_2205 SufBD protein K09015 sufD; Fe-S cluster assembly protein SufD
D Tmath_0395 LemA family protein K03744 lemA; LemA protein
D Tmath_1648 SNARE associated Golgi protein-associated protein K03975 dedA; membrane-associated protein
D Tmath_0120 YhgE/Pip N-terminal domain protein K01421 yhgE; putative membrane protein
D Tmath_0926 membrane protein of unknown function K08972 K08972; putative membrane protein
D Tmath_1034 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
D Tmath_1038 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
C 99997 Function unknown
D Tmath_0452 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Tmath_1071 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Tmath_1976 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Tmath_1982 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Tmath_0453 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Tmath_0405 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Tmath_1585 BAAT/Acyl-CoA thioester hydrolase K06889 K06889; uncharacterized protein
D Tmath_1697 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Tmath_1054 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Tmath_1649 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Tmath_0324 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Tmath_1304 conserved hypothetical protein K06960 K06960; uncharacterized protein
D Tmath_1937 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D Tmath_1360 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Tmath_2170 RNA-metabolising metallo-beta-lactamase K07041 K07041; uncharacterized protein
D Tmath_0400 TatD-related deoxyribonuclease K07051 K07051; uncharacterized protein
D Tmath_2166 PilT protein domain protein K07063 K07063; uncharacterized protein
D Tmath_0736 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Tmath_2112 aldo/keto reductase K07079 K07079; uncharacterized protein
D Tmath_0943 permease K07089 K07089; uncharacterized protein
D Tmath_1055 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Tmath_1056 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Tmath_0381 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Tmath_0658 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Tmath_0733 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Tmath_0584 3H domain protein K07105 K07105; uncharacterized protein
D Tmath_0135 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Tmath_0137 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Tmath_0708 AAA family ATPase K07133 K07133; uncharacterized protein
D Tmath_2232 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Tmath_0205 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein
D Tmath_0617 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Tmath_2285 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Tmath_0786 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Tmath_0958 hypothetical protein K09117 K09117; uncharacterized protein
D Tmath_0047 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein
D Tmath_1394 Domain of unknown function DUF2357 K09124 K09124; uncharacterized protein
D Tmath_0941 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D Tmath_0130 protein of unknown function DUF917 K09703 K09703; uncharacterized protein
D Tmath_0127 protein of unknown function DUF917 K09703 K09703; uncharacterized protein
D Tmath_2021 protein of unknown function DUF1284 K09706 K09706; uncharacterized protein
D Tmath_1361 protein of unknown function DUF116 K09729 K09729; uncharacterized protein
D Tmath_1256 protein of unknown function DUF342 K09749 K09749; uncharacterized protein
D Tmath_1839 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Tmath_0769 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein
D Tmath_0145 protein of unknown function DUF327 K09770 K09770; uncharacterized protein
D Tmath_0774 protein of unknown function DUF458 K09776 K09776; uncharacterized protein
D Tmath_1307 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein
D Tmath_1689 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Tmath_1452 conserved hypothetical protein K05739 seaA; uncharacterized protein
D Tmath_0893 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D Tmath_0367 Putitive phosphate transport regulator K07220 K07220; uncharacterized protein
D Tmath_1240 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024