+D GENES KO
#
KEGG Orthology (KO) - Thioalkalivibrio nitratireducens
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tni00010]
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVNIR_2808 pgi1_[H]; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVNIR_3623 pfp_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_3771 pfkA_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0344 fba_[H]; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVNIR_3128 tpiA_[H]; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVNIR_0341 gapA_[H]; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVNIR_0342 pgk_[H]; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVNIR_3846 gpmI_[H]; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVNIR_0343 pykA_[H]; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_0987 pyk_[H]; Pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_3560 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVNIR_2666 aceE_[H]; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVNIR_2665 aceF_[H]; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_2242 ldh_[H]; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_0107 pckG_[H]; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:tni00020]
D TVNIR_1390 gltA_[H]; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D TVNIR_3341 prpC_[H]; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D TVNIR_1572 acnA_[H]; Aconitate hydratase; 2-methylisocitrate dehydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D TVNIR_1576 icd_[H]; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVNIR_3784 sucA_[H]; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TVNIR_3783 sucB_[H]; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_2487 sucD_[H]; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVNIR_2488 sucC_[H]; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVNIR_1445 sdhA_[H]; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVNIR_1446 sdhB_[H]; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVNIR_1443 sdhC_[H]; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVNIR_1444 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVNIR_1263 frdA_[H]; Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1264 frdB_[H]; Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1262 frdC_[H]; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D TVNIR_1571 fumC_[H]; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_1371 Pyruvate carboxyl transferase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVNIR_1370 oadA_[H]; Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVNIR_0107 pckG_[H]; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D TVNIR_2666 aceE_[H]; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVNIR_2665 aceF_[H]; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:tni00030]
D TVNIR_2808 pgi1_[H]; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVNIR_2825 zwf_[H]; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TVNIR_2826 pgl_[H]; 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D TVNIR_2824 gnd_[H]; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TVNIR_0352 rpe_[H]; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVNIR_0340 tktA_[H]; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TVNIR_1039 rpiA_[H]; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_2673 prs_[H]; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0344 fba_[H]; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3623 pfp_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_3771 pfkA_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tni00040]
D TVNIR_0060 udg_[H]; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVNIR_1801 gtaB_[H]; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVNIR_0352 rpe_[H]; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVNIR_1417 xylB_[H]; Carbohydrate kinase, FGGY family K22935 XK1; D-ribulokinase [EC:2.7.1.47]
D TVNIR_3575 fucA_[H]; Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tni00051]
D TVNIR_3748 scrK_[H]; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TVNIR_0062 xanB_[H]; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_0680 gmd_[H]; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D TVNIR_0634 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVNIR_0677 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVNIR_3575 fucA_[H]; Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D TVNIR_3623 pfp_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_3771 pfkA_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3462 ydjH_[C]; Ketohexokinase K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0344 fba_[H]; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVNIR_3128 tpiA_[H]; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVNIR_2647 manX_[C]; PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:tni00052]
D TVNIR_1801 gtaB_[H]; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVNIR_3623 pfp_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_3771 pfkA_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:tni00053]
D TVNIR_0060 udg_[H]; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVNIR_0056 capI_[H]; UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tni00500]
D TVNIR_0279 mfpsA_[H]; Sucrose phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D TVNIR_2794 ams_[H]; Sucrose phosphorylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D TVNIR_1801 gtaB_[H]; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVNIR_1195 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TVNIR_1268 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TVNIR_2809 glgA_[H]; Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D TVNIR_1265 glgB_[H]; 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TVNIR_0231 glgP_[H]; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TVNIR_1958 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TVNIR_2527 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TVNIR_1270 malQ_[H]; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D TVNIR_1115 Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D TVNIR_1114 treY_[H]; Malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D TVNIR_1113 treZ_[H]; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D TVNIR_1094 ycjT_[C]; Trehalose-6-phosphate phosphatase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D TVNIR_1112 Glucoamylase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVNIR_2808 pgi1_[H]; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVNIR_3748 scrK_[H]; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:tni00620]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_2666 aceE_[H]; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVNIR_2665 aceF_[H]; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_0343 pykA_[H]; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_0987 pyk_[H]; Pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_1892 accA_[H]; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVNIR_0474 accB_[H]; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVNIR_0473 accC_[H]; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVNIR_1222 accD_[H]; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVNIR_2242 ldh_[H]; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TVNIR_3766 ldhA_[H]; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D TVNIR_2017 putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing K18930 dld; D-lactate dehydrogenase
D TVNIR_3192 ycbL_[H]; beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TVNIR_0225 maeB_[H]; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVNIR_3268 maeA_[H]; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVNIR_1371 Pyruvate carboxyl transferase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVNIR_1370 oadA_[H]; Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_1571 fumC_[H]; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVNIR_1263 frdA_[H]; Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1264 frdB_[H]; Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1262 frdC_[H]; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D TVNIR_2810 ppc_[H]; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVNIR_0107 pckG_[H]; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D TVNIR_1350 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D TVNIR_3560 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVNIR_2240 glcB_[H]; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1210 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TVNIR_3220 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TVNIR_3069 yrkH_[H]; metallo-beta-lactamase/rhodanese-like domain-containing protein
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tni00630]
D TVNIR_2247 aceA_[H]; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D TVNIR_2240 glcB_[H]; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_1390 gltA_[H]; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D TVNIR_3341 prpC_[H]; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D TVNIR_1572 acnA_[H]; Aconitate hydratase; 2-methylisocitrate dehydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1238 phbB_[H]; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D TVNIR_2237 glcD_[H]; Glycolate dehydrogenase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D TVNIR_2238 glcE_[H]; Glycolate dehydrogenase, FAD-binding subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D TVNIR_0365 glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TVNIR_2239 glcF_[H]; Glycolate dehydrogenase, iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TVNIR_2110 hprA_[H]; D-3-phosphoglycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVNIR_0353 Phosphoglycolate phosphatase, prokaryotic: HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TVNIR_1827 gph_[H]; Phosphoglycolate phosphatase (clustered with ribosomal large subunit pseudouridine synthase C) - like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TVNIR_2992 cbbL_[H]; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TVNIR_2991 cbbS_[H]; Ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVNIR_1066 gcvPA_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVNIR_1068 gcvPB_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVNIR_1064 gcvT_[H]; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1065 gcvH_[H]; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3241 gcvH5_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3243 gcvH3_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_1849 glxR_[H]; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D TVNIR_0981 fdoG_[H]; Formate dehydrogenase O alpha subunit; selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TVNIR_0983 fdnG_[H]; Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TVNIR_0980 fdoH_[H]; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D TVNIR_0979 fdoI_[H]; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D TVNIR_1246 purU_[H]; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tni00640]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_3344 yhdH_[H]; YhdH, a putative quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1892 accA_[H]; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVNIR_0474 accB_[H]; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVNIR_0473 accC_[H]; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVNIR_1222 accD_[H]; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVNIR_2488 sucC_[H]; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVNIR_2487 sucD_[H]; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVNIR_3341 prpC_[H]; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D TVNIR_3342 prpD_[H]; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D TVNIR_1572 acnA_[H]; Aconitate hydratase; 2-methylisocitrate dehydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D TVNIR_3340 prpB_[H]; Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D TVNIR_2247 aceA_[H]; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D TVNIR_2242 ldh_[H]; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:tni00650]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1245 phbC_[H]; Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D TVNIR_1244 PHA synthase subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D TVNIR_1238 phbB_[H]; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D TVNIR_1445 sdhA_[H]; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVNIR_1446 sdhB_[H]; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVNIR_1443 sdhC_[H]; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVNIR_1444 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVNIR_1263 frdA_[H]; Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1264 frdB_[H]; Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1262 frdC_[H]; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_1006 budB_[H]; Thiamine pyrophosphate-requiring enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3225 ilvI_[H]; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3224 ilvH_[H]; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tni00660]
D TVNIR_1006 budB_[H]; Thiamine pyrophosphate-requiring enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3225 ilvI_[H]; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3224 ilvH_[H]; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVNIR_2488 sucC_[H]; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVNIR_2487 sucD_[H]; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVNIR_1211 leuC_[H]; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TVNIR_1212 leuD_[H]; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TVNIR_1213 leuB_[H]; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tni00562]
D TVNIR_0251 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVNIR_2250 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVNIR_3329 iolE_[H]; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D TVNIR_3128 tpiA_[H]; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tni00190]
D TVNIR_1957 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TVNIR_3126 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TVNIR_1956 nuoB1_[H]; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TVNIR_3125 nuoB_[H]; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TVNIR_1955 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TVNIR_3124 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TVNIR_1954 nuoD1_[H]; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TVNIR_3123 nuoD_[H]; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TVNIR_1953 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TVNIR_3122 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TVNIR_1952 nuoF2_[H]; NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TVNIR_3121 nuoF_[H]; NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TVNIR_1951 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D TVNIR_3120 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D TVNIR_1950 nuoH_[H]; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TVNIR_3119 nuoH2_[H]; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TVNIR_1948 nuoI1_[H]; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D TVNIR_3118 nuoI_[H]; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D TVNIR_1947 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TVNIR_3117 nuoJ_[H]; NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TVNIR_1946 nuoK_[C]; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TVNIR_3116 nuoK_[H]; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TVNIR_1945 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D TVNIR_3115 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D TVNIR_1944 nuoM_[H]; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D TVNIR_3114 nqo13_[H]; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D TVNIR_1943 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TVNIR_3113 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TVNIR_1445 sdhA_[H]; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVNIR_1446 sdhB_[H]; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVNIR_1443 sdhC_[H]; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVNIR_1444 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVNIR_1263 frdA_[H]; Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1264 frdB_[H]; Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1262 frdC_[H]; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D TVNIR_2113 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVNIR_2622 petA_[H]; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVNIR_2621 petB_[H]; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVNIR_2620 petC_[H]; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TVNIR_3018 cyoE_[H]; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D TVNIR_3023 ctaE_[H]; Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D TVNIR_1554 cbaA_[H]; Cytochrome c oxidase (B(O/a)3-type) chain I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D TVNIR_3026 ctaD_[H]; Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D TVNIR_3027 ctaC_[H]; Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D TVNIR_3024 ctaG_[H]; Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D TVNIR_3019 ctaA_[H]; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D TVNIR_0193 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVNIR_2177 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVNIR_0194 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVNIR_2178 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVNIR_2179 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D TVNIR_0196 ccoP_[H]; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVNIR_2180 ccoP2_[H]; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVNIR_2475 cydA_[H]; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D TVNIR_2476 cydB_[H]; putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D TVNIR_3714 atpA_[H]; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TVNIR_3716 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TVNIR_3715 atpG_[H]; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TVNIR_3713 atpH_[H]; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TVNIR_3717 atpC_[H]; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TVNIR_3710 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVNIR_3712 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TVNIR_3711 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TVNIR_3799 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D TVNIR_3798 atpB_[H]; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D TVNIR_3804 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D TVNIR_3797 atpD_[H]; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D TVNIR_3800 atpE_[H]; H+-transporting two-sector ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D TVNIR_3803 atpI_[H]; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D TVNIR_3802 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D TVNIR_2205 ppa_[H]; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D TVNIR_1279 ppk_[H]; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tni00710]
D TVNIR_2992 cbbL_[H]; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TVNIR_2991 cbbS_[H]; Ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TVNIR_0342 pgk_[H]; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVNIR_0341 gapA_[H]; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0344 fba_[H]; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_0340 tktA_[H]; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TVNIR_1039 rpiA_[H]; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TVNIR_3652 cfxP_[H]; Phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19]
D TVNIR_3128 tpiA_[H]; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVNIR_0352 rpe_[H]; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVNIR_2810 ppc_[H]; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVNIR_0225 maeB_[H]; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVNIR_3268 maeA_[H]; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:tni00720]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_3560 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVNIR_2810 ppc_[H]; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVNIR_1371 Pyruvate carboxyl transferase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVNIR_1370 oadA_[H]; Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_1571 fumC_[H]; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVNIR_1445 sdhA_[H]; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVNIR_1446 sdhB_[H]; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVNIR_1443 sdhC_[H]; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVNIR_1444 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVNIR_1263 frdA_[H]; Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1264 frdB_[H]; Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D TVNIR_1262 frdC_[H]; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D TVNIR_2487 sucD_[H]; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVNIR_2488 sucC_[H]; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1576 icd_[H]; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVNIR_1572 acnA_[H]; Aconitate hydratase; 2-methylisocitrate dehydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D TVNIR_1892 accA_[H]; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVNIR_0474 accB_[H]; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVNIR_0473 accC_[H]; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVNIR_1222 accD_[H]; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVNIR_2014 NADPH-dependent glutamate synthase beta chain - like protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D TVNIR_3180 folD_[H]; Methylenetetrahydrofolate dehydrogenase (NADP+)/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TVNIR_0337 metF_[H]; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tni00680]
D TVNIR_0981 fdoG_[H]; Formate dehydrogenase O alpha subunit; selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TVNIR_0983 fdnG_[H]; Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TVNIR_0980 fdoH_[H]; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D TVNIR_0979 fdoI_[H]; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D TVNIR_2014 NADPH-dependent glutamate synthase beta chain - like protein K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_2110 hprA_[H]; D-3-phosphoglycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVNIR_2810 ppc_[H]; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0344 fba_[H]; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3623 pfp_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_3771 pfkA_[H]; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVNIR_1529 gltB_[C]; Glutamate synthase [NADPH] large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_3560 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVNIR_3846 gpmI_[H]; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVNIR_1812 serA_[H]; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVNIR_1813 serC_[H]; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:tni00910]
D TVNIR_1753 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_1754 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_1755 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_2422 nrtB_[H]; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D TVNIR_2421 nasD_[H]; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVNIR_1119 narZ_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1752 narG_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1120 ddhB_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1751 narH_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1749 narI_[H]; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1329 napA_[H]; Periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D TVNIR_1332 Nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D TVNIR_2418 nasA_[H]; Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D TVNIR_2420 Nitrite reductase [NAD(P)H] large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D TVNIR_2419 Nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D TVNIR_0259 nir; eight-heme nitrite reductase precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D TVNIR_1650 hydroxylamine reductase - like protein K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D TVNIR_1656 norB_[H]; Nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D TVNIR_1655 norC_[H]; Nitric-oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C
D TVNIR_1638 nosZ_[H]; Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D TVNIR_1536 gdhA_[C]; Glu/Leu/Phe/Val dehydrogenase dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVNIR_1322 gdh_[H]; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_0613 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_1549 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_0614 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVNIR_1548 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVNIR_2294 yadF_[C]; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D TVNIR_3528 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:tni00920]
D TVNIR_1295 nodQ_[H]; Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D TVNIR_3614 sat_[H]; Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TVNIR_1016 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D TVNIR_0288 cysQ_[H]; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TVNIR_3611 Adenylylsulfate reductase alpha-subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D TVNIR_3612 Adenylylsulfate reductase beta-subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D TVNIR_3618 dmsA_[H]; Anaerobic dimethyl sulfoxide reductase chain A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D TVNIR_3619 4Fe-4S ferredoxin iron-sulfur binding domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D TVNIR_3620 Anaerobic dimethyl sulfoxide reductase chain C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D TVNIR_3419 sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TVNIR_3418 Sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TVNIR_0077 Sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D TVNIR_0076 Sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D TVNIR_3254 yfkN_[H]; Sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D TVNIR_0860 Sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D TVNIR_1766 Sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D TVNIR_0859 dsrB_[H]; Sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D TVNIR_1767 dsvB_[H]; Sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D TVNIR_0852 NADPH-dependent glutamate synthase subunit beta - like protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D TVNIR_0854 hmeC_[H]; Sulfite reduction-associated complex DsrMKJOP protein DsrM (HmeC) K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D TVNIR_0853 hmeD_[H]; Sulfite reduction-associated complex DsrMKJOP protein DsrK (HmeD) K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D TVNIR_0851 Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (HmeF) K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D TVNIR_0850 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D TVNIR_0849 hmeB_[H]; Sulfite reduction-associated complex DsrMKJOP protein DsrP (HmeB) K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D TVNIR_1180 Sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D TVNIR_1705 ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D TVNIR_3355 Sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D TVNIR_0256 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVNIR_0551 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVNIR_1543 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVNIR_2750 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVNIR_3790 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVNIR_0257 cytochrome c subunit of flavocytochrome c sulfide dehydrogenase K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVNIR_0552 Cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVNIR_1542 cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVNIR_2749 sulfide dehydrogenase, cytochrome subunit K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVNIR_3789 cytochrome c subunit of flavocytochrome c sulfide dehydrogenase K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVNIR_1174 Sulfur oxygenase reductase K16952 sor; sulfur oxygenase/reductase [EC:1.13.11.55]
D TVNIR_2721 sulfur oxygenase reductase K16952 sor; sulfur oxygenase/reductase [EC:1.13.11.55]
D TVNIR_0949 phsA_[H]; Formate dehydrogenase O alpha subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D TVNIR_0955 tssA_[H]; Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TVNIR_0870 cysE_[H]; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TVNIR_3633 metA_[H]; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TVNIR_1701 cystathionine gamma-synthase - like protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D TVNIR_3184 metZ_[H]; O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tni00061]
D TVNIR_1892 accA_[H]; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVNIR_0474 accB_[H]; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVNIR_0473 accC_[H]; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVNIR_1222 accD_[H]; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVNIR_1582 acpP_[H]; Acyl carrier protein K02078 acpP; acyl carrier protein
D TVNIR_1580 fabD_[H]; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVNIR_1375 fabH_[H]; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TVNIR_1583 fabF_[H]; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVNIR_1581 fabG_[H]; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2307 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2372 fabA_[H]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TVNIR_1961 fabZ_[H]; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVNIR_2729 fabI_[H]; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tni00071]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1034 fadE_[H]; Butyryl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:tni00074]
D TVNIR_0832 acpS_[H]; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TVNIR_1582 acpP_[H]; Acyl carrier protein K02078 acpP; acyl carrier protein
D TVNIR_1580 fabD_[H]; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tni00561]
D TVNIR_1325 glpK_[H]; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TVNIR_1374 plsX_[H]; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TVNIR_0189 plsY_[H]; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVNIR_3644 plsC_[C]; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TVNIR_1069 dgkA_[H]; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:tni00564]
D TVNIR_3733 gpsA_[H]; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TVNIR_2529 glpD2_[H]; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TVNIR_3431 glpC_[H]; Fe-S oxidoreductase-like protein in Rubrerythrin cluster K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D TVNIR_0189 plsY_[H]; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVNIR_3644 plsC_[C]; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TVNIR_1069 dgkA_[H]; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D TVNIR_1324 ugpQ_[H]; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TVNIR_0902 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D TVNIR_3104 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D TVNIR_1967 cdsA_[H]; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TVNIR_3221 pssA_[H]; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TVNIR_3143 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TVNIR_3222 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TVNIR_1379 pgsA_[H]; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TVNIR_0996 pgpA_[H]; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D TVNIR_0704 HAD-superfamily subfamily IB hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D TVNIR_1568 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVNIR_3195 ywnE_[H]; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVNIR_3387 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVNIR_3397 pgsA_[C]; CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D TVNIR_1985 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVNIR_2804 lipolytic enzyme, G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tni00230]
D TVNIR_2425 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TVNIR_0289 nudE_[H]; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_2673 prs_[H]; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TVNIR_1226 purF_[H]; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TVNIR_0232 purD_[H]; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TVNIR_3400 purN_[H]; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TVNIR_1832 purL_[H]; Phosphoribosylformylglycinamidine synthase, synthetase subunit / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D TVNIR_3399 purM_[H]; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TVNIR_0348 purK_[H]; Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TVNIR_0347 purE_[H]; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TVNIR_0346 purC_[H]; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TVNIR_1570 purB_[H]; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TVNIR_0233 purH_[H]; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVNIR_2959 surE_[H]; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVNIR_0291 yrfG_[H]; HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D TVNIR_2482 yfiH_[H]; YfiH family protein; multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TVNIR_1604 hpt_[H]; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TVNIR_3086 guaB_[H]; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TVNIR_0872 ndk_[H]; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVNIR_3601 yggV_[C]; Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TVNIR_1716 pucE_[H]; Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D TVNIR_1715 xdhA_[H]; Xanthine dehydrogenase, molybdenum binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D TVNIR_2398 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVNIR_3085 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVNIR_3698 gmk_[H]; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TVNIR_2334 nrdA_[H]; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_3568 nrdEB_[H]; Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_2333 nrdB_[H]; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TVNIR_1681 nrdD_[H]; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TVNIR_3480 dgt_[C]; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D TVNIR_2084 spoT_[C]; Metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVNIR_3700 spoT_[H]; GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVNIR_1278 ppx_[H]; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TVNIR_1988 relA_[H]; GTP pyrophosphokinase, (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D TVNIR_0250 cyaA_[H]; Adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TVNIR_3263 purA_[H]; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TVNIR_2802 adoK_[H]; Sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D TVNIR_2901 ygdH_[H]; Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D TVNIR_3622 adk_[H]; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TVNIR_2341 mazG_[H]; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVNIR_0377 cpdA_[H]; 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D TVNIR_1016 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D TVNIR_2212 apaH_[H]; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D TVNIR_1295 nodQ_[H]; Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D TVNIR_3614 sat_[H]; Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TVNIR_1376 adenylate cyclase
C 00240 Pyrimidine metabolism [PATH:tni00240]
D TVNIR_3135 carB_[H]; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVNIR_3136 carA_[H]; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVNIR_0303 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVNIR_3750 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVNIR_0302 pyrC'_[H]; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TVNIR_1171 pyrC_[H]; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TVNIR_1510 pyrD_[H]; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D TVNIR_3760 pyrE_[H]; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TVNIR_1803 pyrF_[H]; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TVNIR_1970 pyrH_[H]; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TVNIR_0872 ndk_[H]; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVNIR_2341 mazG_[H]; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVNIR_2517 yhdE_[C]; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TVNIR_1890 pyrG_[H]; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TVNIR_1807 cmk_[H]; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TVNIR_2959 surE_[H]; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVNIR_0304 pyrR_[H]; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TVNIR_2901 ygdH_[H]; Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D TVNIR_1681 nrdD_[H]; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TVNIR_2373 dcd_[H]; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D TVNIR_2334 nrdA_[H]; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_3568 nrdEB_[H]; Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_2333 nrdB_[H]; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TVNIR_1788 MazG nucleotide pyrophosphohydrolase K16904 DCTPP1; dCTP diphosphatase [EC:3.6.1.12]
D TVNIR_1587 tmk_[H]; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TVNIR_0393 dut_[H]; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TVNIR_1076 thyA_[H]; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TVNIR_3753 amaB_[H]; N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D TVNIR_1296 ycdI_[C]; putative reductase RutE K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tni00250]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_0818 nadB_[H]; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TVNIR_2081 iaaA_[H]; Isoaspartyl aminopeptidase; Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TVNIR_1205 asnO_[H]; Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVNIR_3749 asnB_[H]; Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_3052 ald_[H]; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TVNIR_2656 argG_[H]; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVNIR_3830 argH_[H]; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVNIR_3263 purA_[H]; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TVNIR_1570 purB_[H]; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TVNIR_0303 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVNIR_3750 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVNIR_0613 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_1549 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_0614 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVNIR_1548 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVNIR_1536 gdhA_[C]; Glu/Leu/Phe/Val dehydrogenase dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVNIR_1322 gdh_[H]; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVNIR_1338 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_3135 carB_[H]; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVNIR_3136 carA_[H]; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVNIR_3719 glmS_[H]; Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVNIR_1226 purF_[H]; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tni00260]
D TVNIR_1456 lysC_[H]; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVNIR_1214 asd_[H]; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVNIR_2952 hom_[H]; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVNIR_2951 thrC_[H]; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_2110 hprA_[H]; D-3-phosphoglycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVNIR_3846 gpmI_[H]; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVNIR_1812 serA_[H]; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVNIR_1813 serC_[H]; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TVNIR_1066 gcvPA_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVNIR_1068 gcvPB_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVNIR_1064 gcvT_[H]; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1065 gcvH_[H]; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3241 gcvH5_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3243 gcvH3_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3221 pssA_[H]; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TVNIR_0234 Glycine N-methyltransferase; Sarcosine N-methyltransferase K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156]
D TVNIR_0235 Dimethylglycine N-methyltransferase K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157]
D TVNIR_1040 ilvA_[H]; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TVNIR_1221 trpA_[H]; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TVNIR_1220 trpB_[H]; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVNIR_2712 trpB1_[H]; Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tni00270]
D TVNIR_0870 cysE_[H]; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TVNIR_0239 metH_[H]; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVNIR_3003 metE_[H]; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TVNIR_0236 metK_[H]; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0339 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_1835 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0363 speD_[H]; S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1A K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TVNIR_0379 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TVNIR_2482 yfiH_[H]; YfiH family protein; multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TVNIR_1524 mtaD_[H]; S-adenosylhomocysteine deaminase; Methylthioadenosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D TVNIR_1603 mtnP_[H]; 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D TVNIR_1815 mtnA_[H]; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TVNIR_2376 mtnB_[H]; Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D TVNIR_2378 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D TVNIR_3009 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D TVNIR_0338 ahcY_[H]; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVNIR_1456 lysC_[H]; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVNIR_1214 asd_[H]; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVNIR_2952 hom_[H]; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVNIR_3633 metA_[H]; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TVNIR_1701 cystathionine gamma-synthase - like protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D TVNIR_2175 O-acetylhomoserine/O-acetylserine sulfhydrylase - like protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D TVNIR_3184 metZ_[H]; O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D TVNIR_0503 ilvE_[H]; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVNIR_0275 gshA_[H]; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TVNIR_0311 gshB_[H]; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_0955 tssA_[H]; Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TVNIR_2242 ldh_[H]; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TVNIR_0224 mdh_[H]; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVNIR_0833 cysM_[H]; Cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D TVNIR_1812 serA_[H]; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVNIR_1813 serC_[H]; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tni00280]
D TVNIR_0503 ilvE_[H]; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tni00290]
D TVNIR_1040 ilvA_[H]; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TVNIR_1211 leuC_[H]; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TVNIR_1212 leuD_[H]; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TVNIR_1213 leuB_[H]; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D TVNIR_1006 budB_[H]; Thiamine pyrophosphate-requiring enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3225 ilvI_[H]; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3224 ilvH_[H]; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVNIR_3223 ilvC_[H]; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TVNIR_0459 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVNIR_3072 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVNIR_0503 ilvE_[H]; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVNIR_1210 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TVNIR_3220 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tni00300]
D TVNIR_2952 hom_[H]; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVNIR_1456 lysC_[H]; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVNIR_1214 asd_[H]; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVNIR_3439 dapA_[H]; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TVNIR_3138 dapB_[H]; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TVNIR_1846 dapD_[H]; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D TVNIR_1281 argD_[H]; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TVNIR_0081 dapF_[H]; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TVNIR_0079 lysA_[H]; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVNIR_2609 murE_[H]; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVNIR_2608 murF_[H]; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tni00310]
D TVNIR_3783 sucB_[H]; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_2199 dat_[H]; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:tni00220]
D TVNIR_1280 argF_[H]; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TVNIR_2656 argG_[H]; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVNIR_3830 argH_[H]; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_3135 carB_[H]; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVNIR_3136 carA_[H]; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVNIR_1536 gdhA_[C]; Glu/Leu/Phe/Val dehydrogenase dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVNIR_1322 gdh_[H]; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_0449 argA_[H]; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D TVNIR_2594 argJ_[H]; Glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D TVNIR_0390 argB_[H]; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TVNIR_3446 argC_[H]; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TVNIR_1281 argD_[H]; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TVNIR_2009 argE_[H]; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:tni00330]
D TVNIR_1799 crnA_[H]; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D TVNIR_0380 speA_[H]; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D TVNIR_1822 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D TVNIR_0379 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TVNIR_0363 speD_[H]; S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1A K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TVNIR_0297 proC_[H]; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D TVNIR_1338 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D TVNIR_0163 proB_[H]; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TVNIR_2521 proA_[H]; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D TVNIR_3795 pip_[H]; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_2199 dat_[H]; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tni00340]
D TVNIR_2628 hisG_[H]; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TVNIR_3264 hisZ_[H]; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D TVNIR_0068 hisE_[H]; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D TVNIR_0885 hisI_[H]; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D TVNIR_0070 hisA_[H]; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TVNIR_0071 hisH_[H]; Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TVNIR_0069 hisF_[H]; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TVNIR_0072 hisB_[H]; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2626 hisD_[H]; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TVNIR_2413 egtD_[H]; methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:tni00350]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_3391 putative ATLS1-like light-inducible protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:tni00360]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_0558 dadA_[H]; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D TVNIR_2199 dat_[H]; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVNIR_3391 putative ATLS1-like light-inducible protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TVNIR_3685 katG_[H]; Catalase / Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D TVNIR_1838 hcaC_[H]; 3-phenylpropionate dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:tni00380]
D TVNIR_3783 sucB_[H]; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_3685 katG_[H]; Catalase / Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tni00400]
D TVNIR_2627 aroG_[H]; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TVNIR_3479 aroB_[H]; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TVNIR_0408 aroE_[H]; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D TVNIR_3465 aroK_[H]; Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TVNIR_1808 aroA_[H]; 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TVNIR_3140 aroC_[H]; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TVNIR_0354 trpE_[H]; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVNIR_0358 trpG_[H]; Anthranilate synthase, amidotransferase component; Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TVNIR_0359 trpD_[H]; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D TVNIR_1219 trpF_[H]; Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TVNIR_0360 trpC_[H]; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TVNIR_1221 trpA_[H]; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TVNIR_1220 trpB_[H]; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVNIR_2712 trpB1_[H]; Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVNIR_1811 pheA_[H]; Chorismate mutase I / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D TVNIR_1809 tyrC_[H]; Cyclohexadienyl dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_0102 pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tni00410]
D TVNIR_2811 panD_[H]; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TVNIR_2812 panC_[H]; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TVNIR_3753 amaB_[H]; N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:tni00430]
D TVNIR_1315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_3776 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_3052 ald_[H]; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tni00450]
D TVNIR_1701 cystathionine gamma-synthase - like protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D TVNIR_0239 metH_[H]; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVNIR_3003 metE_[H]; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TVNIR_3084 sufS_[H]; Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D TVNIR_2930 trxB_[H]; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TVNIR_1295 nodQ_[H]; Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D TVNIR_3614 sat_[H]; Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TVNIR_0934 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TVNIR_2414 NADH dehydrogenase-like protein / Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TVNIR_0939 selA_[H]; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D TVNIR_2375 metG_[H]; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tni00460]
D TVNIR_1315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_3776 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_2081 iaaA_[H]; Isoaspartyl aminopeptidase; Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tni00470]
D TVNIR_3255 alr_[H]; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVNIR_2199 dat_[H]; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVNIR_2601 ddl_[H]; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVNIR_2606 murD_[H]; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVNIR_0081 dapF_[H]; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TVNIR_0079 lysA_[H]; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVNIR_0558 dadA_[H]; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:tni00480]
D TVNIR_1315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_3776 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_1404 5-oxoprolinase and Methylhydantoinases A, B - like protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D TVNIR_0275 gshA_[H]; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TVNIR_0311 gshB_[H]; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TVNIR_1535 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVNIR_3202 pepA_[H]; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVNIR_3456 pepN_[H]; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TVNIR_2819 yliJ_[H]; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TVNIR_0807 gor_[H]; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D TVNIR_1576 icd_[H]; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVNIR_2824 gnd_[H]; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TVNIR_2825 zwf_[H]; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TVNIR_0808 grxC_[C]; Peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D TVNIR_0379 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tni00520]
D TVNIR_3444 anmK_[H]; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D TVNIR_1522 Phosphoglycolate phosphatase, prokaryotic: HAD-superfamily hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D TVNIR_0376 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D TVNIR_0375 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D TVNIR_3718 glmU_[H]; N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TVNIR_0625 wecB_[H]; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TVNIR_2629 murA_[H]; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVNIR_2602 murB_[H]; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVNIR_1608 nagZ_[H]; Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TVNIR_3129 glmM_[H]; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D TVNIR_3719 glmS_[H]; Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVNIR_3748 scrK_[H]; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TVNIR_2808 pgi1_[H]; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVNIR_0062 xanB_[H]; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D TVNIR_3850 exoB_[H]; UDP-glucose 4-epimerase K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D TVNIR_3849 yfbG_[C]; NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D TVNIR_0056 capI_[H]; UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_1801 gtaB_[H]; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVNIR_0060 udg_[H]; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVNIR_2647 manX_[C]; PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVNIR_1195 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TVNIR_1268 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TVNIR_1928 rmlA1_[H]; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:tni00541]
D TVNIR_3718 glmU_[H]; N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TVNIR_0671 UDP-glucose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TVNIR_0686 UDP-glucose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TVNIR_1836 UDP-glucose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TVNIR_0687 pht4_[H]; putative oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D TVNIR_0691 degT_[H]; DegT/DnrJ/EryC1/StrS family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D TVNIR_0689 dapH_[H]; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D TVNIR_0699 wecB_[C]; UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D TVNIR_2637 kdsD_[H]; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TVNIR_1889 kdsA_[H]; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TVNIR_2638 kdsC_[H]; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TVNIR_0843 kdsB_[H]; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TVNIR_0625 wecB_[H]; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TVNIR_2698 gmhA_[H]; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TVNIR_2700 gmhB_[H]; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TVNIR_2697 hldE_[H]; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D TVNIR_2696 hldD_[H]; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TVNIR_1801 gtaB_[H]; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVNIR_0060 udg_[H]; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVNIR_2889 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TVNIR_3827 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TVNIR_1928 rmlA1_[H]; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TVNIR_1927 rffG_[H]; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TVNIR_1929 rmlC_[H]; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TVNIR_1930 spsK_[H]; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D TVNIR_0062 xanB_[H]; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D TVNIR_0680 gmd_[H]; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D TVNIR_0634 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVNIR_0677 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D TVNIR_0118 TPR domain protein, putative component of TonB system K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tni00540]
D TVNIR_1960 lpxA_[H]; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TVNIR_2596 lpxC_[H]; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TVNIR_1962 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TVNIR_3183 lpxH_[H]; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TVNIR_1897 lpxB_[H]; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TVNIR_0840 lpxK_[H]; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TVNIR_2701 waaA_[H]; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TVNIR_0563 htrB_[H]; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVNIR_3703 lpxP_[H]; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVNIR_2695 kdkA_[H]; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D TVNIR_2693 rfaF_[H]; ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D TVNIR_3046 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:tni00542]
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:tni00550]
D TVNIR_2629 murA_[H]; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVNIR_2602 murB_[H]; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVNIR_2603 murC_[H]; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TVNIR_2606 murD_[H]; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVNIR_2609 murE_[H]; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVNIR_2601 ddl_[H]; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVNIR_2608 murF_[H]; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TVNIR_1968 uppS_[H]; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TVNIR_2227 uppP_[H]; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVNIR_2607 mraY_[H]; Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVNIR_2604 murG_[H]; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TVNIR_1414 mtgA_[H]; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_3474 mrcA_[H]; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVNIR_2967 mrcB_[H]; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVNIR_1630 pbpC_[H]; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TVNIR_2605 ftsW_[H]; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2203 mrdB_[H]; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2204 mrdA_[H]; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVNIR_2610 penA_[H]; Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVNIR_2200 dacC_[H]; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVNIR_3208 dacB_[H]; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tni00552]
D TVNIR_2227 uppP_[H]; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:tni00543]
D TVNIR_0701 wbjE_[H]; Glycosyltransferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TVNIR_0870 cysE_[H]; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tni00730]
D TVNIR_3762 thiC_[H]; Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D TVNIR_3452 thiDE_[H]; Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D TVNIR_1676 iscS_[H]; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVNIR_3435 dxs_[H]; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TVNIR_3657 thiG_[H]; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D TVNIR_3453 thiE_[H]; Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D TVNIR_0992 thiL_[H]; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D TVNIR_0814 rsgA_[H]; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TVNIR_3622 adk_[H]; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tni00740]
D TVNIR_1316 ribBA_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVNIR_2873 ribB_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TVNIR_2876 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TVNIR_0842 yigB_[H]; 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D TVNIR_0990 ribH_[H]; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TVNIR_2875 ribE_[H]; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TVNIR_0167 ribF_[H]; Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TVNIR_2425 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TVNIR_2652 ubiX_[C]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tni00750]
D TVNIR_1528 pdxH_[H]; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D TVNIR_1813 serC_[H]; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TVNIR_2208 pdxA_[H]; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D TVNIR_0831 pdxJ_[H]; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D TVNIR_2951 thrC_[H]; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tni00760]
D TVNIR_0818 nadB_[H]; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TVNIR_0543 nadA_[H]; Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D TVNIR_2339 nadC_[H]; Quinolinate phosphoribosyltransferase (decarboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TVNIR_1186 pncB2_[H]; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D TVNIR_2959 surE_[H]; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVNIR_2520 nadD_[H]; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TVNIR_2341 mazG_[H]; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVNIR_2486 nadE_[H]; NAD synthetase / Glutamine amidotransferase chain of NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TVNIR_1452 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D TVNIR_3154 ppnK_[H]; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TVNIR_3550 pntAA_[H]; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TVNIR_3551 pntAB_[H]; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TVNIR_3552 pntB_[H]; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:tni00770]
D TVNIR_1006 budB_[H]; Thiamine pyrophosphate-requiring enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3225 ilvI_[H]; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVNIR_3224 ilvH_[H]; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVNIR_3223 ilvC_[H]; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TVNIR_0459 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVNIR_3072 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVNIR_2813 panB_[H]; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TVNIR_2812 panC_[H]; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TVNIR_2067 coaX_[H]; Pantothenate kinase type III, CoaX-like protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D TVNIR_0394 coaBC_[H]; Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D TVNIR_2341 mazG_[H]; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVNIR_3774 coaD_[H]; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TVNIR_2591 coaE_[H]; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TVNIR_0832 acpS_[H]; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TVNIR_0503 ilvE_[H]; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVNIR_3753 amaB_[H]; N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D TVNIR_2811 panD_[H]; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tni00780]
D TVNIR_0192 bioC_[H]; Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D TVNIR_1583 fabF_[H]; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVNIR_1581 fabG_[H]; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2307 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_1961 fabZ_[H]; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVNIR_2729 fabI_[H]; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVNIR_0191 bioH_[H]; Biotin synthesis protein bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D TVNIR_0402 bioF_[H]; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TVNIR_1595 bioA_[H]; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TVNIR_0403 bioB_[H]; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D TVNIR_2068 birA_[H]; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tni00785]
D TVNIR_2197 lipB_[H]; Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TVNIR_2196 lipA_[H]; Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TVNIR_1885 lplJ_[H]; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_2666 aceE_[H]; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVNIR_2665 aceF_[H]; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVNIR_3784 sucA_[H]; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TVNIR_3783 sucB_[H]; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVNIR_1066 gcvPA_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVNIR_1068 gcvPB_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVNIR_1064 gcvT_[H]; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVNIR_1065 gcvH_[H]; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3241 gcvH5_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3243 gcvH3_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tni00790]
D TVNIR_2405 folE1_[H]; GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TVNIR_0431 folB_[H]; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D TVNIR_0432 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TVNIR_2815 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TVNIR_3130 folP_[H]; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TVNIR_1075 dfrA_[H]; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TVNIR_1223 folC_[H]; Dihydrofolate synthase / Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TVNIR_1316 ribBA_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVNIR_2873 ribB_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TVNIR_1584 trpE2_[H]; Para-aminobenzoate synthase, aminase component K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D TVNIR_1585 pabC_[H]; Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D TVNIR_2462 queD_[H]; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TVNIR_0815 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TVNIR_0185 3-oxoacyl-[acyl-carrier protein] reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D TVNIR_3366 queE_[H]; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TVNIR_3365 queC_[H]; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVNIR_1418 queF_[H]; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TVNIR_3624 moaA_[H]; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TVNIR_3592 moaC_[H]; Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TVNIR_3594 moaE_[H]; Molybdenum cofactor biosynthesis protein MoaE; Molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TVNIR_2972 mog_[H]; Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVNIR_1432 moaB_[H]; Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVNIR_2792 moeA_[H]; Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D TVNIR_2790 mobA_[H]; Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tni00670]
D TVNIR_1075 dfrA_[H]; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TVNIR_3180 folD_[H]; Methylenetetrahydrofolate dehydrogenase (NADP+)/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVNIR_3400 purN_[H]; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TVNIR_0233 purH_[H]; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVNIR_1064 gcvT_[H]; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVNIR_0239 metH_[H]; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVNIR_1076 thyA_[H]; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TVNIR_1246 purU_[H]; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D TVNIR_0337 metF_[H]; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TVNIR_1056 ygfA_[C]; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D TVNIR_0236 metK_[H]; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0339 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_1835 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0338 ahcY_[H]; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVNIR_1066 gcvPA_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVNIR_1068 gcvPB_[H]; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1065 gcvH_[H]; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3241 gcvH5_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
D TVNIR_3243 gcvH3_[H]; Glycine cleavage system H protein - like protein K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tni00860]
D TVNIR_1359 gltX2_[H]; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVNIR_2677 hemA_[H]; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TVNIR_3454 hemL_[H]; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TVNIR_0409 hemB_[H]; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TVNIR_3829 hemC_[H]; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D TVNIR_3828 hemD_[H]; Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TVNIR_3476 hemE_[H]; Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D TVNIR_0410 hemF_[H]; Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D TVNIR_2183 hemN_[H]; Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D TVNIR_0100 hemY_[H]; Protoporphyrinogen IX oxidase, aerobic K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D TVNIR_3548 hemH_[H]; Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D TVNIR_2716 cysG_[H]; Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase / Uroporphyrinogen-III methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D TVNIR_1644 nirD_[H]; Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D TVNIR_1645 nirL_[H]; Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D TVNIR_1646 nirG_[H]; Heme d1 biosynthesis protein NirG K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D TVNIR_1647 nirH_[H]; Heme d1 biosynthesis protein NirH K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D TVNIR_1649 cytochrome c - like protein K24867 nirN; dihydro-heme d1 dehydrogenase
D TVNIR_3018 cyoE_[H]; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D TVNIR_3019 ctaA_[H]; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D TVNIR_0848 cobB_[H]; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D TVNIR_3492 cobO_[H]; Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TVNIR_3489 cobQ_[H]; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D TVNIR_3491 cobD_[H]; Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D TVNIR_3490 cobC_[H]; L-threonine 3-O-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D TVNIR_3488 cobP_[H]; Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D TVNIR_3485 cobS_[H]; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D TVNIR_3487 cobT_[H]; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D TVNIR_0467 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TVNIR_3486 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TVNIR_1609 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D TVNIR_2473 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D TVNIR_2982 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tni00130]
D TVNIR_0102 pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TVNIR_0406 ubiA_[H]; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D TVNIR_3824 ubiD_[H]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D TVNIR_2652 ubiX_[C]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TVNIR_1063 visC_[H]; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D TVNIR_1773 yhbU_[H]; peptidase, U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D TVNIR_1774 yhbV_[H]; peptidase U32 K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D TVNIR_1775 yhbT_[H]; Sterol-binding domain protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
D TVNIR_1415 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D TVNIR_1523 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D TVNIR_1062 ubiH_[H]; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D TVNIR_0087 ubiE_[H]; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TVNIR_2848 Methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TVNIR_0364 coq7_[H]; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D TVNIR_1660 menF_[H]; Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D TVNIR_1661 menD_[H]; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D TVNIR_1662 menH_[H]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D TVNIR_1664 menC_[H]; O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D TVNIR_1665 menE_[H]; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D TVNIR_1663 menB_[H]; Naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D TVNIR_1666 ydiI_[C]; ComA operon protein 2 K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D TVNIR_2061 menA_[H]; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TVNIR_3394 wrbA_[H]; Flavoprotein wrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D TVNIR_3058 ycaK_[C]; NAD(P)H oxidoreductase YRKL; Putative NADPH-quinone reductase (modulator of drug activity B); Flavodoxin 2
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tni00900]
D TVNIR_3435 dxs_[H]; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TVNIR_1966 dxr_[H]; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TVNIR_1886 ispD_[H]; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TVNIR_2674 ispE_[H]; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TVNIR_1883 ispF_[H]; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TVNIR_2872 ispG_[H]; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TVNIR_0171 ispH_[H]; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_2652 ubiX_[C]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TVNIR_3434 ispA_[H]; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TVNIR_0159 ispB_[H]; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TVNIR_1968 uppS_[H]; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tni00906]
D TVNIR_1519 crtB_[H]; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:tni00907]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TVNIR_0340 tktA_[H]; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D TVNIR_1306 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tni00523]
D TVNIR_1928 rmlA1_[H]; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TVNIR_1927 rffG_[H]; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TVNIR_1929 rmlC_[H]; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TVNIR_1930 spsK_[H]; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D TVNIR_1660 menF_[H]; Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D TVNIR_1927 rffG_[H]; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:tni00332]
D TVNIR_0163 proB_[H]; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TVNIR_2521 proA_[H]; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tni00261]
D TVNIR_1295 nodQ_[H]; Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D TVNIR_3614 sat_[H]; Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TVNIR_1456 lysC_[H]; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVNIR_1214 asd_[H]; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVNIR_3439 dapA_[H]; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TVNIR_3138 dapB_[H]; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tni00521]
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVNIR_1448 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVNIR_0061 xanA_[H]; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVNIR_0251 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVNIR_2250 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVNIR_1928 rmlA1_[H]; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TVNIR_1927 rffG_[H]; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TVNIR_1929 rmlC_[H]; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TVNIR_1930 spsK_[H]; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TVNIR_2210 glk_[H]; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tni00525]
D TVNIR_1928 rmlA1_[H]; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TVNIR_1927 rffG_[H]; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:tni00401]
D TVNIR_1809 tyrC_[H]; Cyclohexadienyl dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D TVNIR_0354 trpE_[H]; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVNIR_0358 trpG_[H]; Anthranilate synthase, amidotransferase component; Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TVNIR_1580 fabD_[H]; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVNIR_1581 fabG_[H]; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2307 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2729 fabI_[H]; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TVNIR_1582 acpP_[H]; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tni00999]
D TVNIR_0236 metK_[H]; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0339 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_1835 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVNIR_0408 aroE_[H]; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tni00362]
D TVNIR_3275 pcaH_[H]; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D TVNIR_2652 ubiX_[C]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:tni00364]
D TVNIR_0245 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tni00361]
D TVNIR_0245 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:tni00623]
D TVNIR_0245 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:tni00633]
D TVNIR_2057 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D TVNIR_2054 hoxK_[H]; Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D TVNIR_2049 hoxV_[H]; nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D TVNIR_2012 porA_[H]; Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TVNIR_2013 porB_[H]; Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TVNIR_2011 porC_[H]; Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TVNIR_0860 Sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D TVNIR_1766 Sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D TVNIR_0859 dsrB_[H]; Sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D TVNIR_1767 dsvB_[H]; Sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D TVNIR_0852 NADPH-dependent glutamate synthase subunit beta - like protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:tni00930]
D TVNIR_1036 fadJ_[H]; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
D TVNIR_3275 pcaH_[H]; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tni03020]
D TVNIR_2581 rpoB_[H]; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVNIR_2580 rpoC_[H]; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVNIR_2550 rpoA_[H]; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVNIR_3699 rpoZ_[H]; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tni03010]
D TVNIR_r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVNIR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TVNIR_r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TVNIR_1806 rpsA_[H]; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D TVNIR_1972 rpsB_[H]; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D TVNIR_2568 rpsC_[H]; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D TVNIR_2551 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D TVNIR_2557 rpsE_[H]; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D TVNIR_3260 rpsF_[H]; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D TVNIR_2578 rpsG_[H]; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D TVNIR_2560 rpsH_[H]; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D TVNIR_3187 rpsI_[H]; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D TVNIR_2575 rpsJ_[H]; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D TVNIR_2552 rpsK_[H]; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D TVNIR_2579 rpsL_[H]; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D TVNIR_2553 rpsM_[H]; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D TVNIR_2561 rpsN_[H]; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D TVNIR_3107 rpsO_[H]; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D TVNIR_3424 rpsP_[H]; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D TVNIR_2565 rpsQ_[H]; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D TVNIR_3259 rpsR_[H]; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D TVNIR_2570 rpsS_[H]; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D TVNIR_0164 rpsT_[H]; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D TVNIR_3478 rpsU_[H]; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D TVNIR_2584 rplA_[H]; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D TVNIR_2571 rplB_[H]; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D TVNIR_2574 rplC_[H]; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D TVNIR_2573 rplD_[H]; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D TVNIR_2562 rplE_[H]; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D TVNIR_2559 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D TVNIR_3257 rplI_[H]; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D TVNIR_2583 rplJ_[H]; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D TVNIR_2585 rplK_[H]; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D TVNIR_2582 rplL_[H]; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D TVNIR_3188 rplM_[H]; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D TVNIR_2564 rplN_[H]; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D TVNIR_2555 rplO_[H]; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D TVNIR_2567 rplP_[H]; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D TVNIR_2549 rplQ_[H]; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D TVNIR_2558 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D TVNIR_3421 rplS_[H]; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D TVNIR_2217 rplT_[H]; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D TVNIR_0160 rplU_[H]; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D TVNIR_2569 rplV_[H]; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D TVNIR_2572 rplW_[H]; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D TVNIR_2563 rplX_[H]; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D TVNIR_2672 rplY_[H]; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D TVNIR_0161 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D TVNIR_0106 rpmB_[H]; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D TVNIR_2566 rpmC_[H]; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D TVNIR_2556 rpmD_[H]; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D TVNIR_0227 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D TVNIR_1373 rpmF_[H]; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D TVNIR_0105 rpmG_[H]; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D TVNIR_3810 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D TVNIR_2218 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tni00970]
D TVNIR_t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t17 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t40 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t12 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t16 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TVNIR_t28 tRNA-Asn K14221 tRNA-Asp; tRNA Asp
D TVNIR_t11 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TVNIR_t27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVNIR_t37 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVNIR_t09 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TVNIR_t10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t44 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t34 tRNA-His K14226 tRNA-His; tRNA His
D TVNIR_t41 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TVNIR_t05 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t30 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t38 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t33 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVNIR_t39 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVNIR_t03 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t31 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t42 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t43 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TVNIR_t01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t20 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t15 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t19 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t45 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t23 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TVNIR_t26 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TVNIR_t07 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t13 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t29 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t04 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D TVNIR_1359 gltX2_[H]; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVNIR_2684 gatA_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit A; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TVNIR_2683 gatB_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit B; Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TVNIR_2686 gatC_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TVNIR_1362 glnS_[H]; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D TVNIR_1455 alaS_[H]; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVNIR_3379 aspS_[H]; Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVNIR_3642 glyQ_[H]; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVNIR_3643 glyS_[H]; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVNIR_2220 thrS_[H]; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVNIR_2124 serS_[H]; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVNIR_0939 selA_[H]; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D TVNIR_0884 cysS_[H]; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVNIR_2375 metG_[H]; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVNIR_0418 fmt_[H]; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TVNIR_3205 valS_[H]; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVNIR_2524 leuS_[H]; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVNIR_0168 ileS_[H]; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVNIR_1437 lysS_[H]; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVNIR_3555 argS_[H]; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVNIR_3392 proS_[H]; Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVNIR_0876 hisS_[H]; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVNIR_2216 pheS_[H]; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVNIR_2215 pheT_[H]; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVNIR_3442 tyrS_[H]; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVNIR_1428 trpS_[H]; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:tni03008]
D TVNIR_0828 rnc_[H]; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVNIR_0817 orn_[H]; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tni03060]
D TVNIR_2554 secY_[H]; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D TVNIR_2587 secE_[H]; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVNIR_3127 secG_[H]; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVNIR_2252 secD_[H]; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TVNIR_2251 secF_[H]; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TVNIR_2253 yajC_[H]; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TVNIR_3807 oxaA_[H]; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVNIR_2595 secA_[H]; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVNIR_3732 secB_[H]; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D TVNIR_3425 ffh_[H]; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVNIR_0208 ftsY_[H]; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D TVNIR_0067 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_2764 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_0066 tatB_[H]; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVNIR_0065 tatC_[H]; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D TVNIR_0826 lepB_[H]; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TVNIR_0169 lspA_[H]; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:tni04141]
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TVNIR_1502 hspC2_[H]; heat shock protein, HSP20 family K13993 HSP20; HSP20 family protein
D TVNIR_1503 putative heat shock protein K13993 HSP20; HSP20 family protein
D TVNIR_3597 hspA_[H]; heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tni04122]
D TVNIR_1676 iscS_[H]; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVNIR_0955 tssA_[H]; Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TVNIR_3250 yhhP_[C]; SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TVNIR_0856 tusB_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D TVNIR_0857 dsrF_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D TVNIR_0858 dsrE_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D TVNIR_0865 tRNA 2-thiouridine synthesizing protein E; Dissimilatory sulfite reductase, gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D TVNIR_1349 putative dissimilatory sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D TVNIR_1574 mnmA_[H]; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TVNIR_3594 moaE_[H]; Molybdenum cofactor biosynthesis protein MoaE; Molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TVNIR_3624 moaA_[H]; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TVNIR_3593 moaD_[C]; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D TVNIR_2681 moeB_[H]; Sulfur carrier protein adenylyltransferase ThiF K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D TVNIR_3592 moaC_[H]; Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TVNIR_2972 mog_[H]; Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVNIR_1432 moaB_[H]; Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVNIR_3658 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tni03018]
D TVNIR_3449 rppH_[H]; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TVNIR_1830 rne_[H]; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVNIR_3607 rhlB_[H]; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVNIR_3106 pnp_[H]; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVNIR_2396 rhlE_[H]; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TVNIR_3262 rnr_[H]; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVNIR_3767 deaD_[H]; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVNIR_3210 recQ_[H]; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVNIR_3605 rho_[H]; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVNIR_3151 dnaK_[H]; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TVNIR_0484 groL_[H]; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVNIR_2777 hfq_[H]; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVNIR_1279 ppk_[H]; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TVNIR_2816 pcnB_[H]; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tni03030]
D TVNIR_2723 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3099 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_1893 dnaE_[H]; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVNIR_0809 dnaX_[H]; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVNIR_1588 holB_[H]; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVNIR_2522 holA_[H]; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVNIR_3203 holC_[H]; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVNIR_3812 dnaN_[H]; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVNIR_3256 dnaB_[H]; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TVNIR_3495 dnaG_[H]; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_2724 rnhA_[H]; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TVNIR_1894 rnhB_[H]; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tni03410]
D TVNIR_2386 nth_[H]; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TVNIR_3589 mutY_[H]; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TVNIR_0101 mutM_[H]; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TVNIR_1123 yfjP_[H]; HhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D TVNIR_1377 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVNIR_3219 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVNIR_3759 exoA_[H]; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D TVNIR_3820 xthA_[H]; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_2722 recJ_[H]; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tni03420]
D TVNIR_1824 mfd_[H]; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TVNIR_2548 uvrA_[H]; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TVNIR_1610 uvrB_[H]; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TVNIR_1378 uvrC_[H]; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TVNIR_3785 uvrD_[H]; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tni03430]
D TVNIR_1451 mutS_[H]; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TVNIR_2779 mutL_[H]; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TVNIR_3785 uvrD_[H]; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVNIR_3088 xseA_[H]; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TVNIR_3433 exodeoxyribonuclease VII, small subunit - like protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TVNIR_2722 recJ_[H]; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_1893 dnaE_[H]; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVNIR_3812 dnaN_[H]; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVNIR_0809 dnaX_[H]; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVNIR_2522 holA_[H]; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVNIR_1588 holB_[H]; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVNIR_2723 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3099 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3203 holC_[H]; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVNIR_0042 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_1736 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_2442 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tni03440]
D TVNIR_2722 recJ_[H]; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_3813 recF_[H]; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TVNIR_0830 recO_[H]; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TVNIR_0811 recR_[H]; Recombination protein RecR K06187 recR; recombination protein RecR
D TVNIR_1453 recA_[H]; RecA protein K03553 recA; recombination protein RecA
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_3375 ruvA_[H]; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TVNIR_3374 ruvB_[H]; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TVNIR_3376 ruvC_[H]; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TVNIR_1854 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_1856 ATP-dependent DNA helicase-like protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_3702 recG_[H]; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_0137 recB_[H]; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TVNIR_0136 recC_[H]; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TVNIR_0138 recD_[H]; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TVNIR_1893 dnaE_[H]; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVNIR_3812 dnaN_[H]; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVNIR_0809 dnaX_[H]; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVNIR_2522 holA_[H]; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVNIR_1588 holB_[H]; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVNIR_2723 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3099 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3203 holC_[H]; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVNIR_3553 priA_[H]; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D TVNIR_0118 TPR domain protein, putative component of TonB system K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tni02010]
D TVNIR_2422 nrtB_[H]; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D TVNIR_2421 nasD_[H]; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVNIR_0969 modA_[H]; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D TVNIR_0970 modB_[H]; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D TVNIR_0971 modC_[H]; Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TVNIR_0501 futA1_[H]; Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D TVNIR_0500 fbpB2_[H]; Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D TVNIR_0499 potA_[H]; Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TVNIR_1594 opuAC_[H]; Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC K02002 proX; glycine betaine/proline transport system substrate-binding protein
D TVNIR_1593 opuAB_[H]; Glycine betaine ABC transport system, permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D TVNIR_1592 opuAA_[H]; Glycine betaine ABC transport system, ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D TVNIR_1192 ugpC3_[H]; putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TVNIR_2631 mlaC_[H]; Toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TVNIR_1234 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVNIR_2632 yrbD_[C]; putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVNIR_1232 yrbE_[C]; Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVNIR_2633 mlaE_[H]; putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVNIR_2630 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TVNIR_1233 mkl_[H]; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVNIR_2634 mlaF_[H]; putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVNIR_0896 pstS_[H]; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D TVNIR_0897 pstC1_[H]; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D TVNIR_0898 yqgH_[H]; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D TVNIR_0899 pstB2_[H]; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TVNIR_0937 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D TVNIR_0935 ptxC_[H]; Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D TVNIR_0936 phnC_[H]; Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D TVNIR_1073 znuB_[H]; Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D TVNIR_1072 znuC_[H]; Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TVNIR_1319 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D TVNIR_1320 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D TVNIR_1321 cysA_[C]; Sulfate and thiosulfate import ATP-binding protein CysA K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D TVNIR_0583 Additional periplasmic component NikK of nickel ECF transporter K10094 cbiK; nickel transport protein
D TVNIR_1317 ABC-type Co2+ transport system periplasmic component-like protein K10094 cbiK; nickel transport protein
D TVNIR_1318 hypothetical protein K16915 cbiL; nickel transport protein
D TVNIR_1909 rfbA_[H]; efflux ABC-transporter, permease protein, putative K09690 wzm; homopolymeric O-antigen transport system permease protein
D TVNIR_1908 rfbB_[H]; Teichoic acid export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TVNIR_1877 nodJ_[H]; ABC-type multidrug transport system, permease component K09694 nodJ; lipooligosaccharide transport system permease protein
D TVNIR_1876 nodI_[H]; ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TVNIR_2854 drrB_[H]; ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TVNIR_2853 drrA_[H]; putative ABC transporter ATP-binding component K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVNIR_1819 lolC_[H]; Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D TVNIR_1818 lolD_[H]; Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TVNIR_0266 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D TVNIR_2024 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D TVNIR_0265 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D TVNIR_2023 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D TVNIR_2022 ccmB_[H]; ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D TVNIR_2021 ccmA_[H]; ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D TVNIR_3201 lptF_[H]; permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D TVNIR_3200 lptG_[H]; permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D TVNIR_2641 lptB_[H]; Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TVNIR_1637 Nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D TVNIR_1636 nosF_[H]; Nitrous oxide reductase maturation protein NosF (ATPase) K19340 nosF; Cu-processing system ATP-binding protein
D TVNIR_0206 ftsX_[H]; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVNIR_0207 ftsE_[H]; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVNIR_0838 msbA_[H]; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TVNIR_3211 ABC transporter-like protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D TVNIR_0110 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_1993 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_2479 cydC_[H]; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D TVNIR_2478 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease-like protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:tni02060]
D TVNIR_2648 phbH_[H]; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D TVNIR_2647 manX_[C]; PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVNIR_3448 ptsP_[H]; phosphoenolpyruvate-protein phosphotransferase with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TVNIR_2644 ptsN_[H]; PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tni03070]
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_1914 xpsD_[H]; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D TVNIR_3844 xcpQ_[H]; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D TVNIR_3845 exeC_[H]; General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D TVNIR_1923 xpsF_[H]; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D TVNIR_3841 xcpS_[H]; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D TVNIR_1922 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D TVNIR_3840 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D TVNIR_1921 xpsH_[H]; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D TVNIR_3839 xcpU_[H]; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D TVNIR_1920 general secretion pathway protein H K02458 gspI; general secretion pathway protein I
D TVNIR_3838 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D TVNIR_1919 xpsJ_[H]; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D TVNIR_3837 xcpW_[H]; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D TVNIR_1918 pefK_[H]; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D TVNIR_3836 gspK_[H]; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D TVNIR_1917 pefL_[H]; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D TVNIR_3835 exeL_[H]; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D TVNIR_1916 general secretion pathway protein, putative K02462 gspM; general secretion pathway protein M
D TVNIR_3834 outM_[H]; General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D TVNIR_1924 xpsE_[H]; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVNIR_3843 xcpR_[H]; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVNIR_2252 secD_[H]; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TVNIR_2251 secF_[H]; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TVNIR_2587 secE_[H]; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVNIR_3127 secG_[H]; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVNIR_2554 secY_[H]; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D TVNIR_2253 yajC_[H]; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TVNIR_3807 oxaA_[H]; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVNIR_2595 secA_[H]; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVNIR_0208 ftsY_[H]; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D TVNIR_3732 secB_[H]; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D TVNIR_3425 ffh_[H]; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVNIR_0067 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_2764 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_0066 tatB_[H]; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVNIR_0065 tatC_[H]; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D TVNIR_2538 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tni02020]
D TVNIR_0892 phoR_[H]; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVNIR_0891 phoB_[H]; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TVNIR_0896 pstS_[H]; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D TVNIR_0557 Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVNIR_0556 phoP_[H]; two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVNIR_0804 envZ_[H]; Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D TVNIR_0805 ompR_[H]; two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D TVNIR_0823 mucD_[H]; serine protease MucD - like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TVNIR_1100 pcoS_[H]; Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D TVNIR_1101 irlR_[H]; DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D TVNIR_3019 ctaA_[H]; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D TVNIR_3811 dnaA_[H]; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TVNIR_0538 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVNIR_0537 algR_[H]; response regulator receiver protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D TVNIR_0271 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_1756 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_2713 narQ_[H]; Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_0215 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_0272 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_1757 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_2714 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_3847 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_1119 narZ_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1752 narG_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1120 ddhB_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1751 narH_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1749 narI_[H]; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1750 narJ_[H]; Respiratory nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D TVNIR_1457 Carbon storage regulator K03563 csrA; carbon storage regulator
D TVNIR_1458 csrA_[C]; Carbon storage regulator K03563 csrA; carbon storage regulator
D TVNIR_2491 nodV_[H]; Sensory box histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D TVNIR_2490 degU_[H]; DNA-binding response regulator, LuxR family K27077 pprB; two-component system, NarL family, response regulator PprB
D TVNIR_2504 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D TVNIR_2503 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D TVNIR_2502 hofQ_[C]; Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D TVNIR_2501 Flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D TVNIR_2500 gspE_[C]; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TVNIR_2499 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D TVNIR_2498 type II secretion system protein K12511 tadC; tight adherence protein C
D TVNIR_2497 putative pilus assembly protein K27079 tadD; tight adherence protein D
D TVNIR_2495 putative transmembrane protein K27080 tadG; tight adherence protein G
D TVNIR_1974 glnD_[H]; [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D TVNIR_2485 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D TVNIR_3736 ntrB_[H]; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVNIR_3735 glnG_[H]; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_0421 ntrY_[H]; Nitrogen regulation protein ntrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVNIR_0422 ntrX_[H]; Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TVNIR_0954 Fis family two component sigma-54 specific transcriptional regulator - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_1538 sigma54 specific transcriptional regulator, Fis family - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_3094 two component, sigma54 specific, transcriptional regulator, Fis family - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_2752 atoC_[H]; Response regulator of zinc sigma-54-dependent two-component system K07714 atoC; two-component system, NtrC family, response regulator AtoC
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_2515 pilS_[H]; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVNIR_2516 Fis family two component sigma-54 specific transcriptional regulator - like protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVNIR_2642 rpoN_[H]; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TVNIR_0050 pilE_[H]; Fimbrial protein precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D TVNIR_2049 hoxV_[H]; nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D TVNIR_2054 hoxK_[H]; Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D TVNIR_2057 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D TVNIR_3666 hypothetical protein K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D TVNIR_3060 cheR_[H]; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVNIR_1516 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TVNIR_1363 fixJ_[H]; Two-component nitrogen fixation transcriptional regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D TVNIR_0361 crp_[H]; CRP transcriptional dual regulator/cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_2063 crp_[C]; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_2113 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVNIR_2622 petA_[H]; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVNIR_2621 petB_[H]; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVNIR_2620 petC_[H]; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TVNIR_0193 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVNIR_2177 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVNIR_0194 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVNIR_2178 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVNIR_2179 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D TVNIR_0196 ccoP_[H]; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVNIR_2180 ccoP2_[H]; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVNIR_2475 cydA_[H]; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D TVNIR_2476 cydB_[H]; putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_1383 wza_[H]; polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D TVNIR_1831 yccY_[C]; Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D TVNIR_0625 wecB_[H]; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:tni04146]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_1576 icd_[H]; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVNIR_1282 sodB_[H]; Superoxide dismutase (Fe) K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TVNIR_2113 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVNIR_2622 petA_[H]; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tni02024]
D TVNIR_2777 hfq_[H]; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVNIR_0354 trpE_[H]; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVNIR_0358 trpG_[H]; Anthranilate synthase, amidotransferase component; Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TVNIR_2627 aroG_[H]; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TVNIR_3137 lsrG_[H]; Antibiotic biosynthesis monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_0361 crp_[H]; CRP transcriptional dual regulator/cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_2063 crp_[C]; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_3563 zur_[H]; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TVNIR_1316 ribBA_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVNIR_2876 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TVNIR_2356 solute binding protein-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TVNIR_2357 appB_[H]; Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TVNIR_2358 gsiD_[H]; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TVNIR_2359 dppD_[H]; oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TVNIR_2360 appF_[H]; Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TVNIR_3807 oxaA_[H]; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVNIR_0133 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D TVNIR_2587 secE_[H]; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVNIR_3127 secG_[H]; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVNIR_2554 secY_[H]; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D TVNIR_2253 yajC_[H]; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TVNIR_2595 secA_[H]; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVNIR_0208 ftsY_[H]; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D TVNIR_3732 secB_[H]; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D TVNIR_3425 ffh_[H]; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D TVNIR_3060 cheR_[H]; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly [PATH:tni02040]
D TVNIR_3496 rpoD_[H]; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D TVNIR_2642 rpoN_[H]; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:tni04981]
D TVNIR_1056 ygfA_[C]; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D TVNIR_1075 dfrA_[H]; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TVNIR_2878 glyA_[H]; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVNIR_1076 thyA_[H]; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TVNIR_0239 metH_[H]; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D TVNIR_0239 metH_[H]; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tni01501]
D TVNIR_3758 ampG4_[H]; AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TVNIR_1608 nagZ_[H]; Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TVNIR_0276 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0800 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1200 yegM_[C]; putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2908 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2922 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2948 Efflux transporter, RND family, MFP subunit, AcrA/E family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_3390 mdtA_[H]; multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0277 acrD_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_0801 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_1199 acrB_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2923 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2947 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_3389 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_3474 mrcA_[H]; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVNIR_2204 mrdA_[H]; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVNIR_2610 penA_[H]; Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tni01502]
D TVNIR_2601 ddl_[H]; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVNIR_3255 alr_[H]; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVNIR_2608 murF_[H]; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TVNIR_2607 mraY_[H]; Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVNIR_2604 murG_[H]; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tni01503]
D TVNIR_0557 Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVNIR_0556 phoP_[H]; two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVNIR_2780 amiC_[H]; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVNIR_0823 mucD_[H]; serine protease MucD - like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TVNIR_3746 dsbA_[H]; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TVNIR_0276 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0800 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1200 yegM_[C]; putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2908 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2922 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2948 Efflux transporter, RND family, MFP subunit, AcrA/E family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_3390 mdtA_[H]; multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0277 acrD_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_0801 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_1199 acrB_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2923 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2947 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_3389 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_1960 lpxA_[H]; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tni01000]
C 01001 Protein kinases [BR:tni01001]
D TVNIR_2538 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D TVNIR_0722 HIPA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_0741 HIPA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_1249 hipA_[H]; HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_1384 ptk_[H]; exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D TVNIR_0892 phoR_[H]; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVNIR_0557 Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVNIR_0804 envZ_[H]; Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D TVNIR_1100 pcoS_[H]; Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D TVNIR_0271 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_1756 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_2713 narQ_[H]; Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_2491 nodV_[H]; Sensory box histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D TVNIR_0538 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVNIR_3736 ntrB_[H]; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVNIR_0421 ntrY_[H]; Nitrogen regulation protein ntrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVNIR_2515 pilS_[H]; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVNIR_0953 sensor histidine kinase - like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D TVNIR_1516 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TVNIR_2416 luxQ_[H]; PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tni01009]
D TVNIR_0338 ahcY_[H]; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:tni01002]
D TVNIR_0169 lspA_[H]; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TVNIR_2590 tapD_[H]; Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVNIR_2506 prepilin peptidase; typeII/IV secretion K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D TVNIR_2052 hupD_[H]; Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D TVNIR_2168 hyaD_[C]; Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D TVNIR_2398 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVNIR_3085 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVNIR_0428 yvdE_[H]; Para-aminobenzoate synthase, amidotransferase component K07010 K07010; putative glutamine amidotransferase
D TVNIR_1226 purF_[H]; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TVNIR_0613 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_1549 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVNIR_3719 glmS_[H]; Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVNIR_1205 asnO_[H]; Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVNIR_3749 asnB_[H]; Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVNIR_3725 yajL_[H]; DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 K03152 thiJ; protein deglycase [EC:3.5.1.124]
D TVNIR_2157 ynhG_[H]; ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D TVNIR_1939 ycbB_[H]; Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D TVNIR_3456 pepN_[H]; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TVNIR_3819 prlC_[H]; Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D TVNIR_0209 pqqL_[C]; peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TVNIR_0210 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TVNIR_1535 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVNIR_3202 pepA_[H]; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVNIR_1532 Peptidase M23 - like protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TVNIR_1973 map_[H]; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TVNIR_1061 pepP_[H]; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TVNIR_1091 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVNIR_3131 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVNIR_1301 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D TVNIR_3193 htpX_[H]; Protease htpX - like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D TVNIR_3253 yfgC_[C]; Exported zinc metalloprotease YfgC precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D TVNIR_1965 yaeL_[C]; Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TVNIR_0273 mtfA_[H]; protein of unknown function DUF980 K09933 mtfA; MtfA peptidase
D TVNIR_0823 mucD_[H]; serine protease MucD - like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TVNIR_3595 degQ_[H]; HtrA protease/chaperone protein / Serine protease (Protease DO) K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D TVNIR_2624 trypsin-like serine protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D TVNIR_0133 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D TVNIR_2200 dacC_[H]; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVNIR_2925 pbpG_[H]; Murein-DD-endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D TVNIR_3208 dacB_[H]; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TVNIR_2774 clpP_[H]; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TVNIR_2772 lon_[H]; ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TVNIR_1878 lexA_[H]; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVNIR_2715 ymfK_[C]; putative phage repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D TVNIR_0826 lepB_[H]; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TVNIR_3795 pip_[H]; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TVNIR_2531 prc_[C]; Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TVNIR_3726 ctpA_[H]; Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TVNIR_1826 nhaA_[H]; Periplasmic serine proteases (ClpP class) K04773 sppA; protease IV [EC:3.4.21.-]
D TVNIR_3415 sohB_[H]; putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D TVNIR_1346 Rhomboid family protein K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D TVNIR_0084 hslV_[H]; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TVNIR_2081 iaaA_[H]; Isoaspartyl aminopeptidase; Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TVNIR_1315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_3776 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVNIR_1774 yhbV_[H]; peptidase U32 K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D TVNIR_1773 yhbU_[H]; peptidase, U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D TVNIR_3403 pmbA_[H]; TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D TVNIR_3405 tldD_[H]; TldD protein, part of proposed TldE/TldD proteolytic complex K03568 tldD; TldD protein
D TVNIR_1631 yfhM_[C]; Alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D TVNIR_3266 hflC_[H]; HflC protein K04087 hflC; modulator of FtsH protease HflC
D TVNIR_3267 hflK_[H]; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tni01003]
D TVNIR_3545 putative membrane protein K23683 aglD; glycosyltransferase AglD [EC:2.4.1.-]
D TVNIR_0118 TPR domain protein, putative component of TonB system K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D TVNIR_2809 glgA_[H]; Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D TVNIR_1414 mtgA_[H]; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_1630 pbpC_[H]; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TVNIR_2967 mrcB_[H]; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVNIR_3474 mrcA_[H]; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVNIR_2605 ftsW_[H]; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2203 mrdB_[H]; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TVNIR_1290 opgH_[H]; Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tni01005]
D TVNIR_1960 lpxA_[H]; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TVNIR_1897 lpxB_[H]; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TVNIR_2596 lpxC_[H]; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TVNIR_1962 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TVNIR_3183 lpxH_[H]; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TVNIR_0840 lpxK_[H]; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TVNIR_0563 htrB_[H]; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVNIR_3703 lpxP_[H]; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVNIR_2701 waaA_[H]; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TVNIR_2695 kdkA_[H]; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D TVNIR_1889 kdsA_[H]; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TVNIR_0843 kdsB_[H]; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TVNIR_2638 kdsC_[H]; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TVNIR_2637 kdsD_[H]; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TVNIR_2693 rfaF_[H]; ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D TVNIR_3046 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D TVNIR_2694 glycosyl transferase, family 9 K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D TVNIR_2698 gmhA_[H]; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TVNIR_2700 gmhB_[H]; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TVNIR_2697 hldE_[H]; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D TVNIR_2696 hldD_[H]; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TVNIR_0697 WblL protein K26858 wzy; O-antigen polymerase [EC:2.4.99.27]
D TVNIR_1380 wecA_[H]; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tni01011]
D TVNIR_2629 murA_[H]; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVNIR_2602 murB_[H]; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVNIR_2603 murC_[H]; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TVNIR_2606 murD_[H]; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVNIR_2609 murE_[H]; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVNIR_2601 ddl_[H]; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVNIR_3255 alr_[H]; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVNIR_2607 mraY_[H]; Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVNIR_2604 murG_[H]; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TVNIR_2227 uppP_[H]; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVNIR_0166 mviN_[H]; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D TVNIR_3474 mrcA_[H]; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVNIR_2967 mrcB_[H]; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVNIR_1630 pbpC_[H]; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TVNIR_2204 mrdA_[H]; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVNIR_2610 penA_[H]; Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVNIR_2200 dacC_[H]; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVNIR_3208 dacB_[H]; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TVNIR_2925 pbpG_[H]; Murein-DD-endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D TVNIR_1414 mtgA_[H]; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2605 ftsW_[H]; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2203 mrdB_[H]; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_2157 ynhG_[H]; ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D TVNIR_1939 ycbB_[H]; Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D TVNIR_1532 Peptidase M23 - like protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TVNIR_0220 slt_[H]; Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TVNIR_2202 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D TVNIR_3049 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D TVNIR_1938 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TVNIR_2726 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TVNIR_1237 mltF_[H]; Transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D TVNIR_3561 mltF1_[H]; transglycosylase, SLT family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D TVNIR_1586 yceG_[C]; aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TVNIR_2201 rlpA_[H]; Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TVNIR_3039 rlpA_[C]; Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TVNIR_2780 amiC_[H]; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVNIR_0466 ampD_[H]; N-acetylmuramoyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tni01004]
D TVNIR_1580 fabD_[H]; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVNIR_1375 fabH_[H]; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TVNIR_1583 fabF_[H]; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVNIR_1581 fabG_[H]; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2307 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVNIR_2372 fabA_[H]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TVNIR_1961 fabZ_[H]; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVNIR_2729 fabI_[H]; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVNIR_1985 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVNIR_2804 lipolytic enzyme, G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVNIR_3100 acsA_[H]; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1374 plsX_[H]; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TVNIR_0189 plsY_[H]; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVNIR_3644 plsC_[C]; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tni01008]
D TVNIR_1306 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
C 01006 Prenyltransferases [BR:tni01006]
D TVNIR_3434 ispA_[H]; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TVNIR_0159 ispB_[H]; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TVNIR_1968 uppS_[H]; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TVNIR_1519 crtB_[H]; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TVNIR_2778 miaA_[H]; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TVNIR_2061 menA_[H]; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TVNIR_0406 ubiA_[H]; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D TVNIR_3018 cyoE_[H]; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tni01007]
D TVNIR_1359 gltX2_[H]; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVNIR_1362 glnS_[H]; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D TVNIR_3091 gluQ_[H]; glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TVNIR_3442 tyrS_[H]; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVNIR_1428 trpS_[H]; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TVNIR_0884 cysS_[H]; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVNIR_3555 argS_[H]; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVNIR_2375 metG_[H]; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVNIR_0168 ileS_[H]; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVNIR_3205 valS_[H]; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVNIR_2524 leuS_[H]; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVNIR_1437 lysS_[H]; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVNIR_3379 aspS_[H]; Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVNIR_0876 hisS_[H]; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVNIR_3642 glyQ_[H]; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVNIR_3643 glyS_[H]; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVNIR_2124 serS_[H]; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVNIR_3392 proS_[H]; Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVNIR_2220 thrS_[H]; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVNIR_1455 alaS_[H]; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVNIR_2216 pheS_[H]; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVNIR_2215 pheT_[H]; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVNIR_1611 aatB_[H]; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVNIR_2953 yfdZ_[H]; Aspartate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D TVNIR_1810 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_2625 hisC2_[H]; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVNIR_0402 bioF_[H]; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TVNIR_1281 argD_[H]; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TVNIR_1595 bioA_[H]; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TVNIR_3454 hemL_[H]; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TVNIR_2199 dat_[H]; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVNIR_0503 ilvE_[H]; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVNIR_2885 pucG_[H]; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVNIR_1813 serC_[H]; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TVNIR_0691 degT_[H]; DegT/DnrJ/EryC1/StrS family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tni00194]
D TVNIR_3717 atpC_[H]; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TVNIR_3716 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TVNIR_3715 atpG_[H]; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TVNIR_3714 atpA_[H]; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TVNIR_3713 atpH_[H]; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TVNIR_3712 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TVNIR_3711 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TVNIR_3710 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVNIR_3709 ATP synthase I chain K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tni03000]
D TVNIR_3067 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D TVNIR_3002 metR_[H]; Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D TVNIR_0253 oxyR_[H]; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D TVNIR_0454 cysB_[H]; Cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D TVNIR_2978 cmpR_[H]; Transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D TVNIR_1763 hdfR_[H]; transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D TVNIR_0798 slmA_[H]; Transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D TVNIR_0447 dhaR_[H]; Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D TVNIR_3078 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D TVNIR_3628 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D TVNIR_1208 bkdR_[H]; putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TVNIR_0676 Transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D TVNIR_0684 Transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D TVNIR_3754 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TVNIR_1019 B12 binding domain protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TVNIR_2390 mlrA_[H]; putative transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TVNIR_3156 fur_[H]; Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TVNIR_3171 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TVNIR_3563 zur_[H]; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TVNIR_3659 Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator
D TVNIR_0361 crp_[H]; CRP transcriptional dual regulator/cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_2063 crp_[C]; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVNIR_2173 anr_[H]; transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D TVNIR_1122 fnrA_[H]; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D TVNIR_1258 CRP transcriptional dual regulator/cyclic AMP receptor protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D TVNIR_1871 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D TVNIR_0356 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TVNIR_0871 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TVNIR_1228 iscR_[H]; Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TVNIR_3582 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D TVNIR_2068 birA_[H]; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TVNIR_0469 fis_[C]; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVNIR_0728 mqsA_[H]; putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D TVNIR_0618 Helix-turn-helix motif protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0636 helix-hairpin-helix DNA-binding motif-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0679 Helix-turn-helix motif protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_1049 XRE family transcriptional regulator, plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0968 modE_[H]; DNA-binding domain of ModE / Molybdate-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D TVNIR_1314 yhhG_[C]; Nickel responsive regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D TVNIR_1338 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D TVNIR_0619 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_0644 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_0663 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_3308 CopG-like domain-containing protein DNA-binding K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_1634 nosR_[H]; Nitrous oxide reductase maturation protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D TVNIR_3459 bolA_[H]; Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D TVNIR_3708 parB_[H]; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TVNIR_0058 rfaH_[H]; Transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D TVNIR_3153 hrcA_[H]; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D TVNIR_3438 gcvR_[H]; Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D TVNIR_2994 rnk_[H]; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D TVNIR_0304 pyrR_[H]; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TVNIR_2106 hypothetical protein K07733 alpA; prophage regulatory protein
D TVNIR_0306 yqgE_[C]; UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D TVNIR_0378 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_1504 dksA_[C]; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_3090 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_2877 nrdR_[H]; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D TVNIR_2613 mraZ_[H]; Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tni03021]
D TVNIR_2550 rpoA_[H]; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVNIR_2581 rpoB_[H]; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVNIR_2580 rpoC_[H]; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVNIR_3699 rpoZ_[H]; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TVNIR_3496 rpoD_[H]; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D TVNIR_2954 rpoS_[H]; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D TVNIR_0819 algU_[H]; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TVNIR_0205 rpoH_[H]; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D TVNIR_2642 rpoN_[H]; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TVNIR_3111 nusA_[H]; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D TVNIR_0991 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D TVNIR_2586 nusG_[H]; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TVNIR_2619 sspA_[H]; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D TVNIR_2617 sspB_[H]; Stringent starvation protein B K03600 sspB; stringent starvation protein B
D TVNIR_0820 rseA_[C]; Sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D TVNIR_0821 mucB_[H]; Sigma factor RpoE negative regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB
D TVNIR_0822 rseC_[C]; Sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D TVNIR_0378 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_1504 dksA_[C]; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_3090 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_3133 greA_[H]; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TVNIR_3605 rho_[H]; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVNIR_3604 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:tni03019]
D TVNIR_1830 rne_[H]; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVNIR_3408 rng_[H]; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TVNIR_0828 rnc_[H]; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVNIR_3262 rnr_[H]; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVNIR_2800 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D TVNIR_0817 orn_[H]; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TVNIR_3607 rhlB_[H]; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TVNIR_2396 rhlE_[H]; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TVNIR_3767 deaD_[H]; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVNIR_3210 recQ_[H]; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVNIR_3106 pnp_[H]; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVNIR_3605 rho_[H]; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVNIR_3151 dnaK_[H]; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TVNIR_0484 groL_[H]; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVNIR_2777 hfq_[H]; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVNIR_1279 ppk_[H]; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TVNIR_2816 pcnB_[H]; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D TVNIR_3449 rppH_[H]; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TVNIR_1457 Carbon storage regulator K03563 csrA; carbon storage regulator
D TVNIR_1458 csrA_[C]; Carbon storage regulator K03563 csrA; carbon storage regulator
D TVNIR_2646 yhbJ_[C]; UPF0042 nucleotide-binding protein yhbJ K06958 rapZ; RNase adapter protein RapZ
D TVNIR_3557 hrpA_[H]; ATP-dependent RNA helicase hrpA - like protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D TVNIR_1976 hrpB_[H]; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tni03011]
D TVNIR_1806 rpsA_[H]; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D TVNIR_1972 rpsB_[H]; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D TVNIR_2568 rpsC_[H]; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D TVNIR_2551 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D TVNIR_2557 rpsE_[H]; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D TVNIR_3260 rpsF_[H]; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D TVNIR_2578 rpsG_[H]; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D TVNIR_2560 rpsH_[H]; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D TVNIR_3187 rpsI_[H]; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D TVNIR_2575 rpsJ_[H]; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D TVNIR_2552 rpsK_[H]; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D TVNIR_2579 rpsL_[H]; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D TVNIR_2553 rpsM_[H]; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D TVNIR_2561 rpsN_[H]; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D TVNIR_3107 rpsO_[H]; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D TVNIR_3424 rpsP_[H]; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D TVNIR_2565 rpsQ_[H]; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D TVNIR_3259 rpsR_[H]; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D TVNIR_2570 rpsS_[H]; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D TVNIR_0164 rpsT_[H]; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D TVNIR_3478 rpsU_[H]; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D TVNIR_2584 rplA_[H]; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D TVNIR_2571 rplB_[H]; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D TVNIR_2574 rplC_[H]; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D TVNIR_2573 rplD_[H]; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D TVNIR_2562 rplE_[H]; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D TVNIR_2559 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D TVNIR_3257 rplI_[H]; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D TVNIR_2583 rplJ_[H]; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D TVNIR_2585 rplK_[H]; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D TVNIR_2582 rplL_[H]; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D TVNIR_3188 rplM_[H]; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D TVNIR_2564 rplN_[H]; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D TVNIR_2555 rplO_[H]; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D TVNIR_2567 rplP_[H]; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D TVNIR_2549 rplQ_[H]; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D TVNIR_2558 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D TVNIR_3421 rplS_[H]; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D TVNIR_2217 rplT_[H]; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D TVNIR_0160 rplU_[H]; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D TVNIR_2569 rplV_[H]; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D TVNIR_2572 rplW_[H]; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D TVNIR_2563 rplX_[H]; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D TVNIR_0161 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D TVNIR_0106 rpmB_[H]; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D TVNIR_2566 rpmC_[H]; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D TVNIR_2556 rpmD_[H]; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D TVNIR_0227 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D TVNIR_1373 rpmF_[H]; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D TVNIR_0105 rpmG_[H]; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D TVNIR_3810 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D TVNIR_2218 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D TVNIR_2672 rplY_[H]; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D TVNIR_r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVNIR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TVNIR_r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tni03009]
D TVNIR_0828 rnc_[H]; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVNIR_0817 orn_[H]; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TVNIR_0829 era_[H]; GTP-binding protein Era K03595 era; GTPase
D TVNIR_0162 obg_[H]; GTPase ObgE/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TVNIR_0378 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_1504 dksA_[C]; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_3090 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D TVNIR_3111 nusA_[H]; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D TVNIR_0991 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D TVNIR_2586 nusG_[H]; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TVNIR_2209 rsmA_[H]; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TVNIR_0419 rsmB_[H]; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TVNIR_0349 ygjO_[C]; methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TVNIR_0211 rsmD_[H]; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TVNIR_0336 rsmE_[H]; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TVNIR_3706 rsmG_[H]; rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TVNIR_2612 rsmH_[H]; rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TVNIR_2614 rsmI_[H]; rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TVNIR_2112 yhiQ_[C]; putative methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D TVNIR_3261 rlmB_[H]; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TVNIR_3132 rlmE_[H]; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D TVNIR_2518 rlmH_[H]; LSU m3Psi1915 methyltransferase RlmH/ybeA K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TVNIR_3417 yhiR_[H]; Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D TVNIR_0873 rlmN_[H]; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TVNIR_0835 rumA_[H]; RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TVNIR_1433 rluB_[H]; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TVNIR_1828 rluC_[H]; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TVNIR_2483 rluD_[H]; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TVNIR_0221 rluE_[H]; Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D TVNIR_3218 rimI_[H]; Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TVNIR_3423 rimM_[H]; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D TVNIR_0228 rimO_[H]; Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D TVNIR_0472 prmA_[H]; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TVNIR_3142 prmB_[H]; Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D TVNIR_1569 ycfD_[H]; transcription factor jumonji jmjC domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D TVNIR_1830 rne_[H]; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVNIR_3408 rng_[H]; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TVNIR_0305 yqgF_[C]; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TVNIR_3767 deaD_[H]; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVNIR_0814 rsgA_[H]; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TVNIR_0879 der_[H]; GTP-binding protein EngA K03977 engA; GTPase
D TVNIR_2776 hflX_[H]; GTP-binding protein HflX K03665 hflX; GTPase
D TVNIR_0412 rimN_[H]; Putative translation factor, SUA5/yciO/yrdC-like protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TVNIR_2084 spoT_[C]; Metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVNIR_3700 spoT_[H]; GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVNIR_3109 rbfA_[H]; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TVNIR_3112 rimP_[H]; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D TVNIR_2519 ybeB_[H]; Iojap protein K09710 ybeB; ribosome-associated protein
D TVNIR_2542 ybeY_[C]; Putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D TVNIR_3134 yhbY_[H]; putative RNA-binding protein containing KH domain, possibly ribosomal protein K07574 yhbY; RNA-binding protein
D TVNIR_2454 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein
D TVNIR_2457 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein
D TVNIR_2643 yhbH_[C]; Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D TVNIR_2670 engD_[H]; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D TVNIR_1372 yceD_[C]; putative metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tni03016]
D TVNIR_1257 rnz_[H]; Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D TVNIR_2800 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D TVNIR_3627 cca_[H]; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TVNIR_1860 rtcB_[H]; Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D TVNIR_1861 Archease K24956 ZBTB8OS; protein archease
D TVNIR_1359 gltX2_[H]; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVNIR_3392 proS_[H]; Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVNIR_0168 ileS_[H]; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVNIR_2524 leuS_[H]; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVNIR_2375 metG_[H]; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVNIR_1362 glnS_[H]; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D TVNIR_3555 argS_[H]; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVNIR_1437 lysS_[H]; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVNIR_3379 aspS_[H]; Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVNIR_1455 alaS_[H]; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVNIR_2220 thrS_[H]; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVNIR_2124 serS_[H]; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVNIR_0884 cysS_[H]; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVNIR_3205 valS_[H]; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVNIR_0876 hisS_[H]; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVNIR_2216 pheS_[H]; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVNIR_2215 pheT_[H]; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVNIR_3442 tyrS_[H]; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVNIR_1428 trpS_[H]; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TVNIR_3796 dtd_[H]; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TVNIR_0812 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TVNIR_3656 trmB_[H]; tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TVNIR_1218 truA_[H]; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TVNIR_3108 truB_[H]; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TVNIR_2963 truD_[H]; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D TVNIR_1676 iscS_[H]; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVNIR_0412 rimN_[H]; Putative translation factor, SUA5/yciO/yrdC-like protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TVNIR_2778 miaA_[H]; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TVNIR_3806 mnmE_[H]; GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TVNIR_3705 mnmG_[H]; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TVNIR_0934 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TVNIR_2414 NADH dehydrogenase-like protein / Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TVNIR_0288 cysQ_[H]; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TVNIR_3809 rnpA_[H]; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TVNIR_2893 protein of unknown function UPF0278 K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D TVNIR_2668 rnt_[H]; Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D TVNIR_3600 rph_[H]; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D TVNIR_2690 rnd_[H]; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D TVNIR_2235 ligT_[H]; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D TVNIR_1505 yjjK_[C]; ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D TVNIR_3642 glyQ_[H]; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVNIR_3643 glyS_[H]; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVNIR_3091 gluQ_[H]; glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TVNIR_2993 YbaK/prolyl-tRNA synthetase associated protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D TVNIR_1236 tadA_[H]; tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D TVNIR_1545 dus2_[H]; tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D TVNIR_0470 dusB_[H]; tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TVNIR_2544 miaB_[H]; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TVNIR_3422 trmD_[H]; tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TVNIR_0869 trmJ_[H]; tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D TVNIR_3734 trmL_[H]; tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D TVNIR_1574 mnmA_[H]; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TVNIR_3704 ttcA_[H]; tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D TVNIR_3250 yhhP_[C]; SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TVNIR_0856 tusB_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D TVNIR_0857 dsrF_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D TVNIR_0858 dsrE_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D TVNIR_0865 tRNA 2-thiouridine synthesizing protein E; Dissimilatory sulfite reductase, gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D TVNIR_1349 putative dissimilatory sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D TVNIR_1837 iscA_[H]; Iron binding protein SufA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D TVNIR_1442 ygfZ_[H]; Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D TVNIR_1531 mnmC_[H]; 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D TVNIR_2255 queA_[H]; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TVNIR_3365 queC_[H]; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVNIR_2462 queD_[H]; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TVNIR_3366 queE_[H]; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TVNIR_1418 queF_[H]; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TVNIR_2783 yjeS_[H]; Epoxyqueuosine (oQ) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D TVNIR_2034 selU_[H]; Selenophosphate-dependent tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D TVNIR_2254 tgt_[H]; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TVNIR_1891 tilS_[H]; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TVNIR_3636 tmcA_[H]; putative P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D TVNIR_2964 yeaZ_[H]; Inactive metal-dependent protease - like protein, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TVNIR_0188 gcp_[H]; YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TVNIR_2781 yjeE_[H]; ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TVNIR_3645 ygdL_[H]; HesA/MoeB/ThiF family protein related to EC-YgdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D TVNIR_3262 rnr_[H]; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVNIR_3106 pnp_[H]; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVNIR_0016 vapC_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVNIR_0519 vapC2_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVNIR_2282 vapC1_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tni03012]
D TVNIR_3110 infB_[H]; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D TVNIR_2219 infC_[H]; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D TVNIR_0255 yheS_[H]; Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TVNIR_1971 tsf_[H]; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D TVNIR_2576 tuf1_[H]; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D TVNIR_1440 fusA_[C]; Translation elongation factor G-related protein K02355 fusA; elongation factor G
D TVNIR_2577 Translation elongation factor G K02355 fusA; elongation factor G
D TVNIR_2736 Translation elongation factor G K02355 fusA; elongation factor G
D TVNIR_0938 selB_[H]; Selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D TVNIR_2678 prfA_[H]; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TVNIR_1969 frr_[H]; Ribosome recycling factor K02838 frr; ribosome recycling factor
D TVNIR_2679 prmC_[H]; Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TVNIR_2671 pth_[H]; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TVNIR_1579 infA_[H]; Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D TVNIR_3146 efp_[H]; Translation elongation factor P K02356 efp; elongation factor P
D TVNIR_3145 yjeA_[H]; Translation elongation factor P Lys34:lysine transferase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D TVNIR_3147 Lysyl-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D TVNIR_1436 prfB_[H]; Peptide chain release factor 2; programmed frameshift-containing K02836 prfB; peptide chain release factor 2
D TVNIR_3215 prfC_[H]; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D TVNIR_2801 yaeJ_[C]; Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tni03110]
D TVNIR_1578 clpA_[H]; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D TVNIR_2481 clpB_[H]; ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D TVNIR_2773 clpX_[H]; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TVNIR_0085 hslU_[H]; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TVNIR_3151 dnaK_[H]; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TVNIR_0484 groL_[H]; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVNIR_3150 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TVNIR_1501 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D TVNIR_3596 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D TVNIR_2682 hslO_[H]; 33 kDa chaperonin (Heat shock protein 33) (HSP33) K04083 hslO; molecular chaperone Hsp33
D TVNIR_3152 grpE_[H]; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D TVNIR_1502 hspC2_[H]; heat shock protein, HSP20 family K13993 HSP20; HSP20 family protein
D TVNIR_1503 putative heat shock protein K13993 HSP20; HSP20 family protein
D TVNIR_3597 hspA_[H]; heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D TVNIR_2818 hslR_[H]; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 - like) K04762 hslR; ribosome-associated heat shock protein Hsp15
D TVNIR_0483 groS_[H]; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D TVNIR_0823 mucD_[H]; serine protease MucD - like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TVNIR_1091 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVNIR_3131 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVNIR_3710 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVNIR_3732 secB_[H]; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D TVNIR_0802 Copper metallochaperone, bacterial Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D TVNIR_3015 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D TVNIR_2048 [NiFe] hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D TVNIR_2045 hypB_[H]; [NiFe] hydrogenase nickel incorporation-associated protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D TVNIR_0945 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D TVNIR_0133 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D TVNIR_3181 cyp18_[H]; Peptidyl-prolyl cis-trans isomerase ppiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D TVNIR_2730 ppiD_[H]; Peptidyl-prolyl cis-trans isomerase ppiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D TVNIR_0894 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D TVNIR_3043 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D TVNIR_0170 yaaD_[H]; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D TVNIR_0943 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TVNIR_1302 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TVNIR_3609 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TVNIR_1422 ppiC_[C]; PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D TVNIR_1747 prsA_[H]; Peptidyl-prolyl cis-trans isomerase ppiD K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D TVNIR_2207 surA_[H]; Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D TVNIR_2650 Thioredoxin K03671 TXN; thioredoxin
D TVNIR_3606 Thioredoxin K03671 TXN; thioredoxin
D TVNIR_3731 trxC_[C]; Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D TVNIR_2785 ybbN_[H]; Thioredoxin domain-containing protein YbbN K05838 ybbN; putative thioredoxin
D TVNIR_2717 Glutaredoxin 3 K03676 grxC; glutaredoxin 3
D TVNIR_3730 Glutaredoxin 3 K03676 grxC; glutaredoxin 3
D TVNIR_2669 grxD_[H]; Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D TVNIR_3746 dsbA_[H]; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TVNIR_1555 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVNIR_2786 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVNIR_0477 dsbD_[H]; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D TVNIR_0262 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D TVNIR_0269 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D TVNIR_0491 Thiol-disulfide isomerase and thioredoxins K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D TVNIR_2029 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:tni04131]
D TVNIR_0872 ndk_[H]; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_0341 gapA_[H]; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVNIR_0343 pykA_[H]; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_0987 pyk_[H]; Pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TVNIR_1396 yxiO_[H]; major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D TVNIR_0345 protein of unknown function DUF500 K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system [BR:tni04121]
C 03051 Proteasome [BR:tni03051]
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tni03032]
D TVNIR_2724 rnhA_[H]; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TVNIR_2769 hupB_[H]; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D TVNIR_2214 ihfA_[H]; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D TVNIR_1805 ihfB_[H]; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D TVNIR_3811 dnaA_[H]; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TVNIR_3256 dnaB_[H]; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TVNIR_3495 dnaG_[H]; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_1893 dnaE_[H]; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVNIR_3812 dnaN_[H]; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVNIR_3203 holC_[H]; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVNIR_2522 holA_[H]; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVNIR_1588 holB_[H]; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVNIR_2723 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3099 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_0809 dnaX_[H]; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVNIR_1894 rnhB_[H]; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVNIR_0042 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_1736 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_2442 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_3396 DnaA regulatory inactivator Had K10763 hda; DnaA-homolog protein
D TVNIR_1814 gyrA_[H]; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TVNIR_3816 gyrB_[H]; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TVNIR_3194 parC_[H]; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVNIR_2784 parE_[H]; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVNIR_0413 topA_[H]; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tni03036]
D TVNIR_0118 TPR domain protein, putative component of TonB system K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D TVNIR_0828 rnc_[H]; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_2769 hupB_[H]; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D TVNIR_2214 ihfA_[H]; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D TVNIR_1805 ihfB_[H]; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D TVNIR_1501 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D TVNIR_3596 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D TVNIR_1500 transcriptional regulatory protein, MerR family K18997 cbpM; chaperone modulatory protein CbpM
D TVNIR_3811 dnaA_[H]; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TVNIR_0292 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D TVNIR_3048 yccV_[C]; hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D TVNIR_0469 fis_[C]; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVNIR_2777 hfq_[H]; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVNIR_1208 bkdR_[H]; putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TVNIR_1419 smc_[H]; Chromosome partition protein smc K03529 smc; chromosome segregation protein
D TVNIR_1429 scpA_[H]; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D TVNIR_1430 scpB_[H]; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D TVNIR_2599 ftsA_[H]; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TVNIR_1887 ftsB_[H]; Septum formation initiator K05589 ftsB; cell division protein FtsB
D TVNIR_0207 ftsE_[H]; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVNIR_2610 penA_[H]; Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVNIR_2929 ftsK_[H]; Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TVNIR_2611 ftsL_[H]; Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D TVNIR_2600 ftsQ_[H]; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D TVNIR_2605 ftsW_[H]; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_0206 ftsX_[H]; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVNIR_2598 ftsZ_[H]; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVNIR_1420 zipA_[H]; Cell division protein ZipA K03528 zipA; cell division protein ZipA
D TVNIR_1057 zapA_[H]; Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D TVNIR_1058 hypothetical protein K09892 zapB; cell division protein ZapB
D TVNIR_2592 yacF_[C]; protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD
D TVNIR_2780 amiC_[H]; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVNIR_0276 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0800 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1200 yegM_[C]; putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2908 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2922 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2948 Efflux transporter, RND family, MFP subunit, AcrA/E family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_3390 mdtA_[H]; multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1408 minC_[H]; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TVNIR_1409 minD_[H]; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TVNIR_1410 minE_[H]; Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D TVNIR_0798 slmA_[H]; Transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D TVNIR_2687 mreB_[H]; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVNIR_2688 mreC_[H]; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TVNIR_2689 mreD_[H]; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D TVNIR_2203 mrdB_[H]; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_0545 soj_[H]; ATPase, ParA family K03496 parA; chromosome partitioning protein
D TVNIR_2944 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D TVNIR_3029 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D TVNIR_3707 sopA_[C]; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D TVNIR_3708 parB_[H]; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TVNIR_3194 parC_[H]; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVNIR_2784 parE_[H]; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVNIR_3705 mnmG_[H]; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TVNIR_3706 rsmG_[H]; rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TVNIR_0083 xerC_[H]; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D TVNIR_0916 integrase/recombinase K03733 xerC; integrase/recombinase XerC
D TVNIR_0913 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D TVNIR_0914 phage integrase K04763 xerD; integrase/recombinase XerD
D TVNIR_1651 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D TVNIR_2320 putative integrase K04763 xerD; integrase/recombinase XerD
D TVNIR_2787 xerD_[H]; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D TVNIR_2869 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D TVNIR_2374 mrp_[H]; Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TVNIR_0006 fic_[C]; Fic family putative cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D TVNIR_2260 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D TVNIR_3744 engB_[H]; GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tni03400]
D TVNIR_3420 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TVNIR_2392 phr_[H]; Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D TVNIR_3589 mutY_[H]; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TVNIR_2386 nth_[H]; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TVNIR_2593 mutT_[H]; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) / Thiamin-phosphate pyrophosphorylase-like protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TVNIR_2817 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TVNIR_3286 nudG_[H]; Putative 7,8-Dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TVNIR_0393 dut_[H]; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TVNIR_1377 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVNIR_3219 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVNIR_1123 yfjP_[H]; HhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D TVNIR_0101 mutM_[H]; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TVNIR_3759 exoA_[H]; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D TVNIR_3820 xthA_[H]; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D TVNIR_3721 protein of unknown function DUF99 K09120 dU; endonuclease dU
D TVNIR_2722 recJ_[H]; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TVNIR_1421 ligA_[H]; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVNIR_3740 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVNIR_2548 uvrA_[H]; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TVNIR_1610 uvrB_[H]; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TVNIR_1378 uvrC_[H]; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TVNIR_3785 uvrD_[H]; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVNIR_2581 rpoB_[H]; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVNIR_2580 rpoC_[H]; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVNIR_2550 rpoA_[H]; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVNIR_3699 rpoZ_[H]; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TVNIR_1824 mfd_[H]; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TVNIR_1451 mutS_[H]; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TVNIR_2779 mutL_[H]; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TVNIR_3088 xseA_[H]; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TVNIR_3433 exodeoxyribonuclease VII, small subunit - like protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TVNIR_1893 dnaE_[H]; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVNIR_3812 dnaN_[H]; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVNIR_3203 holC_[H]; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVNIR_2522 holA_[H]; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVNIR_1588 holB_[H]; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVNIR_2723 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_3099 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVNIR_0809 dnaX_[H]; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_0042 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_1736 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_2442 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_0137 recB_[H]; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TVNIR_0136 recC_[H]; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TVNIR_0138 recD_[H]; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TVNIR_1453 recA_[H]; RecA protein K03553 recA; recombination protein RecA
D TVNIR_3375 ruvA_[H]; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TVNIR_3374 ruvB_[H]; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TVNIR_3376 ruvC_[H]; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TVNIR_3553 priA_[H]; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TVNIR_3428 radA_[H]; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TVNIR_3813 recF_[H]; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TVNIR_1854 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_1856 ATP-dependent DNA helicase-like protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_3702 recG_[H]; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVNIR_0830 recO_[H]; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TVNIR_0811 recR_[H]; Recombination protein RecR K06187 recR; recombination protein RecR
D TVNIR_3155 recN_[H]; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D TVNIR_1789 rdgC_[H]; DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D TVNIR_1486 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TVNIR_2451 ygbT_[C]; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TVNIR_1178 yjgR_[H]; ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D TVNIR_1814 gyrA_[H]; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TVNIR_3816 gyrB_[H]; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TVNIR_0413 topA_[H]; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TVNIR_2769 hupB_[H]; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D TVNIR_0469 fis_[C]; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVNIR_2214 ihfA_[H]; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D TVNIR_1805 ihfB_[H]; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D TVNIR_3210 recQ_[H]; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVNIR_2228 dinB_[H]; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D TVNIR_2715 ymfK_[C]; putative phage repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D TVNIR_1878 lexA_[H]; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVNIR_1879 recA_[C]; SOS cell division inhibitor SulA K14160 imuA; protein ImuA
D TVNIR_1880 imuB_[H]; DNA polymerase IV-like protein ImuB K14161 imuB; protein ImuB
D TVNIR_2937 dnaE2_[H]; DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D TVNIR_1454 recX_[H]; Regulatory protein RecX K03565 recX; regulatory protein
D TVNIR_0464 rep_[H]; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D TVNIR_2965 yoaA_[H]; DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TVNIR_2334 nrdA_[H]; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_3568 nrdEB_[H]; Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVNIR_2333 nrdB_[H]; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tni03029]
D TVNIR_2621 petB_[H]; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVNIR_3110 infB_[H]; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D TVNIR_2219 infC_[H]; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D TVNIR_1971 tsf_[H]; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D TVNIR_2576 tuf1_[H]; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D TVNIR_1440 fusA_[C]; Translation elongation factor G-related protein K02355 fusA; elongation factor G
D TVNIR_2577 Translation elongation factor G K02355 fusA; elongation factor G
D TVNIR_2736 Translation elongation factor G K02355 fusA; elongation factor G
D TVNIR_0829 era_[H]; GTP-binding protein Era K03595 era; GTPase
D TVNIR_3442 tyrS_[H]; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVNIR_2524 leuS_[H]; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVNIR_3379 aspS_[H]; Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVNIR_3555 argS_[H]; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVNIR_2684 gatA_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit A; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TVNIR_2683 gatB_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit B; Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TVNIR_2686 gatC_[H]; Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TVNIR_2102 Putative single stranded DNA-binding protein of prophage K03111 ssb; single-strand DNA-binding protein
D TVNIR_2545 ssb_[H]; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVNIR_1964 yaeT_[H]; Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D TVNIR_3151 dnaK_[H]; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TVNIR_3152 grpE_[H]; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D TVNIR_0484 groL_[H]; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVNIR_0483 groS_[H]; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D TVNIR_3150 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TVNIR_1676 iscS_[H]; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVNIR_2669 grxD_[H]; Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D TVNIR_2374 mrp_[H]; Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TVNIR_3018 cyoE_[H]; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D TVNIR_3024 ctaG_[H]; Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D TVNIR_3019 ctaA_[H]; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D TVNIR_3807 oxaA_[H]; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVNIR_3021 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D TVNIR_3014 scoP_[H]; Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D TVNIR_3742 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tni02000]
D TVNIR_0838 msbA_[H]; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TVNIR_0001 Lipid A export ATP-binding/permease protein MsbA K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D TVNIR_3211 ABC transporter-like protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D TVNIR_0567 ABC transporter-like protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TVNIR_0110 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_1993 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_2479 cydC_[H]; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D TVNIR_2478 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease-like protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D TVNIR_3635 uupA_[H]; ABC transporter ATP-binding protein Uup K15738 uup; ABC transport system ATP-binding/permease protein
D TVNIR_0969 modA_[H]; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D TVNIR_0970 modB_[H]; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D TVNIR_0971 modC_[H]; Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TVNIR_2422 nrtB_[H]; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D TVNIR_2421 nasD_[H]; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVNIR_0501 futA1_[H]; Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D TVNIR_0500 fbpB2_[H]; Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D TVNIR_0499 potA_[H]; Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TVNIR_1594 opuAC_[H]; Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC K02002 proX; glycine betaine/proline transport system substrate-binding protein
D TVNIR_1593 opuAB_[H]; Glycine betaine ABC transport system, permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D TVNIR_1592 opuAA_[H]; Glycine betaine ABC transport system, ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D TVNIR_0595 NnrS family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TVNIR_2079 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TVNIR_0594 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D TVNIR_0593 ssuB_[H]; ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TVNIR_1192 ugpC3_[H]; putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TVNIR_0438 ybbM_[C]; YbbM seven transmembrane helix protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D TVNIR_0437 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D TVNIR_1234 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVNIR_2632 yrbD_[C]; putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVNIR_1232 yrbE_[C]; Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVNIR_2633 mlaE_[H]; putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVNIR_1233 mkl_[H]; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVNIR_2634 mlaF_[H]; putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVNIR_1235 protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D TVNIR_2631 mlaC_[H]; Toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TVNIR_2630 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TVNIR_1189 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TVNIR_1190 yurN_[H]; binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TVNIR_1191 araQ_[H]; Glycerol-3-phosphate ABC transporter, permease protein UgpE K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TVNIR_0896 pstS_[H]; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D TVNIR_0897 pstC1_[H]; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D TVNIR_0898 yqgH_[H]; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D TVNIR_0899 pstB2_[H]; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TVNIR_0937 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D TVNIR_0935 ptxC_[H]; Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D TVNIR_0936 phnC_[H]; Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D TVNIR_2356 solute binding protein-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TVNIR_2357 appB_[H]; Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TVNIR_2358 gsiD_[H]; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TVNIR_2359 dppD_[H]; oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TVNIR_2360 appF_[H]; Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TVNIR_0599 hmuT_[H]; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D TVNIR_0598 hmuU_[H]; Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D TVNIR_0597 hmuV_[H]; ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D TVNIR_1358 Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TVNIR_2660 ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TVNIR_3484 Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TVNIR_3493 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TVNIR_1357 fecD_[C]; Iron(III) dicitrate transport system permease protein FecD K02015 ABC.FEV.P; iron complex transport system permease protein
D TVNIR_2659 btuC_[C]; Iron(III) dicitrate transport system permease protein FecD K02015 ABC.FEV.P; iron complex transport system permease protein
D TVNIR_3483 yvrB_[H]; ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D TVNIR_1356 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TVNIR_2658 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TVNIR_3482 yusV_[H]; ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TVNIR_1073 znuB_[H]; Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D TVNIR_1072 znuC_[H]; Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TVNIR_1320 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D TVNIR_1319 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D TVNIR_1321 cysA_[C]; Sulfate and thiosulfate import ATP-binding protein CysA K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D TVNIR_0583 Additional periplasmic component NikK of nickel ECF transporter K10094 cbiK; nickel transport protein
D TVNIR_1317 ABC-type Co2+ transport system periplasmic component-like protein K10094 cbiK; nickel transport protein
D TVNIR_1318 hypothetical protein K16915 cbiL; nickel transport protein
D TVNIR_3166 znuA_[C]; Zinc ABC transporter, periplasmic-binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D TVNIR_3164 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D TVNIR_3165 yfmM_[H]; ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D TVNIR_1909 rfbA_[H]; efflux ABC-transporter, permease protein, putative K09690 wzm; homopolymeric O-antigen transport system permease protein
D TVNIR_1908 rfbB_[H]; Teichoic acid export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TVNIR_3201 lptF_[H]; permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D TVNIR_3200 lptG_[H]; permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D TVNIR_2641 lptB_[H]; Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TVNIR_1877 nodJ_[H]; ABC-type multidrug transport system, permease component K09694 nodJ; lipooligosaccharide transport system permease protein
D TVNIR_1876 nodI_[H]; ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TVNIR_1637 Nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D TVNIR_1636 nosF_[H]; Nitrous oxide reductase maturation protein NosF (ATPase) K19340 nosF; Cu-processing system ATP-binding protein
D TVNIR_2854 drrB_[H]; ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TVNIR_2853 drrA_[H]; putative ABC transporter ATP-binding component K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVNIR_1819 lolC_[H]; Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D TVNIR_1818 lolD_[H]; Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TVNIR_0266 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D TVNIR_2024 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D TVNIR_0265 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D TVNIR_2023 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D TVNIR_2022 ccmB_[H]; ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D TVNIR_2021 ccmA_[H]; ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D TVNIR_0206 ftsX_[H]; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVNIR_0207 ftsE_[H]; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVNIR_1533 yadH_[H]; ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D TVNIR_1534 yadG_[H]; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TVNIR_1622 macB_[H]; macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_1987 ybbP_[H]; ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2433 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2508 macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2536 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2757 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2759 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_2797 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D TVNIR_0493 antimicrobial peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_1623 Cell division transporter, ATP-binding protein FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_1986 ybbA_[H]; ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_2434 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_2509 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_2537 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_2756 yknY_[H]; putative macrolide efflux ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_2798 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVNIR_1841 sufC_[H]; Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D TVNIR_1283 sdcS_[H]; anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D TVNIR_3139 hcaT_[H]; Nucleoside:H+ symporter:Major facilitator superfamily K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D TVNIR_2917 Permease of the major facilitator superfamily K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D TVNIR_1753 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_1754 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_1755 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D TVNIR_3758 ampG4_[H]; AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TVNIR_1396 yxiO_[H]; major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D TVNIR_3448 ptsP_[H]; phosphoenolpyruvate-protein phosphotransferase with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TVNIR_2648 phbH_[H]; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D TVNIR_2647 manX_[C]; PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVNIR_2644 ptsN_[H]; PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TVNIR_1083 kch_[C]; Potassium channel protein K10716 kch; voltage-gated potassium channel
D TVNIR_3034 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D TVNIR_2913 Voltage-gated sodium channel subunit K08714 VGSC; voltage-gated sodium channel
D TVNIR_0436 amtB_[C]; Ammonium transporter K03320 amt; ammonium transporter, Amt family
D TVNIR_2819 yliJ_[H]; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TVNIR_2619 sspA_[H]; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D TVNIR_2160 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D TVNIR_2109 yccA_[C]; Putative TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D TVNIR_0455 kefA_[H]; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel
D TVNIR_1412 ybiO_[H]; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D TVNIR_2435 Magnesium transporter K06213 mgtE; magnesium transporter
D TVNIR_2436 Mg/Co/Ni transporter MgtE / CBS domain protein K06213 mgtE; magnesium transporter
D TVNIR_0836 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D TVNIR_2470 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D TVNIR_2744 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D TVNIR_3335 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D TVNIR_0837 exbD2_[H]; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TVNIR_2469 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TVNIR_3336 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TVNIR_3337 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TVNIR_3372 tolQ_[H]; MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D TVNIR_2743 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D TVNIR_3371 tolR_[H]; Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D TVNIR_2856 crcB2_[H]; Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D TVNIR_2857 crcB1_[H]; crcB - like protein K06199 crcB; fluoride exporter
D TVNIR_1618 putative integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D TVNIR_1167 putative hemolysin DUF21 family K16302 CNNM; metal transporter CNNM
D TVNIR_3427 putative hemolysin DUF21 family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TVNIR_0486 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TVNIR_1989 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TVNIR_1173 putative facilitator of salicylate uptake K06076 fadL; long-chain fatty acid transport protein
D TVNIR_2467 fecA_[H]; TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D TVNIR_3494 btuB_[H]; Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D TVNIR_0602 irgA_[H]; TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D TVNIR_0596 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D TVNIR_2661 bhuA_[H]; TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D TVNIR_3240 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D TVNIR_2748 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TVNIR_3565 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_0127 bepC_[H]; Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D TVNIR_1992 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D TVNIR_1383 wza_[H]; polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D TVNIR_1964 yaeT_[H]; Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D TVNIR_0878 yfgL_[H]; Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) K17713 bamB; outer membrane protein assembly factor BamB
D TVNIR_3440 Outer membrane protein NlpB; Lipoprotein-34 precursor K07287 bamC; outer membrane protein assembly factor BamC
D TVNIR_2484 putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) K05807 bamD; outer membrane protein assembly factor BamD
D TVNIR_3832 competence lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D TVNIR_3157 omlA_[H]; SmpA/OmlA domain-containing protein K06186 bamE; outer membrane protein assembly factor BamE
D TVNIR_0497 ytfM_[H]; Outer membrane protein K07278 tamA; translocation and assembly module TamA
D TVNIR_0496 ytfN_[H]; putative exported protein K09800 tamB; translocation and assembly module TamB
D TVNIR_2640 yhbN_[C]; LptA, protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D TVNIR_2639 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D TVNIR_2206 lptD_[H]; Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D TVNIR_2523 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D TVNIR_2541 corC_[H]; Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D TVNIR_2337 gufA_[H]; Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D TVNIR_0277 acrD_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_0801 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_1199 acrB_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2923 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2947 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_3389 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_1010 Permease of the drug/metabolite transporter (DMT) superfamily K03298 TC.DME; drug/metabolite transporter, DME family
D TVNIR_0145 lldP_[C]; L-lactate permease K03303 lutP; lactate permease
D TVNIR_2225 High-affinity choline uptake protein BetT K02168 betT; choline/glycine/proline betaine transport protein
D TVNIR_2805 betT_[H]; High-affinity choline uptake protein BetT K02168 betT; choline/glycine/proline betaine transport protein
D TVNIR_2636 yrbG_[H]; Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D TVNIR_0213 opuE_[H]; sodium-solute symporter, putative K20989 DUR3; urea-proton symporter
D TVNIR_3097 yjcG_[C]; Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D TVNIR_0463 cvrA_[H]; Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D TVNIR_1873 trkH_[H]; Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D TVNIR_0423 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D TVNIR_1874 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D TVNIR_1678 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D TVNIR_2108 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D TVNIR_2035 yjbB_[H]; Sodium-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D TVNIR_0962 arsB_[H]; Arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D TVNIR_3583 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D TVNIR_2369 mrpA_[H]; Na(+) H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D TVNIR_2368 mrpB_[H]; Na(+) H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D TVNIR_0094 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TVNIR_2367 mrpC_[H]; Na(+) H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TVNIR_0092 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TVNIR_2366 Na(+) H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TVNIR_0099 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TVNIR_2365 mrpE_[H]; Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TVNIR_0098 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TVNIR_2364 mrpF_[H]; Na(+) H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TVNIR_0097 Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TVNIR_2363 Na(+) H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TVNIR_0166 mviN_[H]; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D TVNIR_2649 yfdV_[C]; Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TVNIR_3409 perM_[H]; Putative permease PerM (YfgO) K03548 perM; putative permease
D TVNIR_2605 ftsW_[H]; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D TVNIR_0882 putative membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D TVNIR_0307 TonB protein K03832 tonB; periplasmic protein TonB
D TVNIR_3368 pal_[H]; 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor K03640 pal; peptidoglycan-associated lipoprotein
D TVNIR_3370 Translation initiation factor 2 K03646 tolA; colicin import membrane protein
D TVNIR_3369 tolB_[H]; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins K03641 tolB; TolB protein
D TVNIR_2003 hppA_[H]; Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D TVNIR_1119 narZ_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1752 narG_[H]; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1120 ddhB_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1751 narH_[H]; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_1749 narI_[H]; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D TVNIR_0949 phsA_[H]; Formate dehydrogenase O alpha subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D TVNIR_0111 aprE_[H]; HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D TVNIR_1994 cyaD_[H]; protein secretion ABC efflux system, membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D TVNIR_0276 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0800 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1200 yegM_[C]; putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2908 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2922 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2948 Efflux transporter, RND family, MFP subunit, AcrA/E family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_3390 mdtA_[H]; multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1384 ptk_[H]; exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D TVNIR_0584 feoB1_[H]; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D TVNIR_2918 crtK_[H]; TspO and MBR like protein K05770 TSPO; translocator protein
D TVNIR_0261 ccmF_[H]; Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D TVNIR_0268 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D TVNIR_2026 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D TVNIR_2762 copper resistance protein CopC K07156 copC; copper resistance protein C
D TVNIR_2763 copper resistance protein CopC K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:tni02044]
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D TVNIR_0110 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_1993 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TVNIR_0111 aprE_[H]; HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D TVNIR_1994 cyaD_[H]; protein secretion ABC efflux system, membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D TVNIR_0127 bepC_[H]; Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D TVNIR_1992 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D TVNIR_3845 exeC_[H]; General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D TVNIR_1914 xpsD_[H]; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D TVNIR_3844 xcpQ_[H]; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D TVNIR_1924 xpsE_[H]; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVNIR_3843 xcpR_[H]; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVNIR_1923 xpsF_[H]; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D TVNIR_3841 xcpS_[H]; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D TVNIR_1922 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D TVNIR_3840 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D TVNIR_1921 xpsH_[H]; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D TVNIR_3839 xcpU_[H]; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D TVNIR_1920 general secretion pathway protein H K02458 gspI; general secretion pathway protein I
D TVNIR_3838 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D TVNIR_1919 xpsJ_[H]; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D TVNIR_3837 xcpW_[H]; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D TVNIR_1918 pefK_[H]; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D TVNIR_3836 gspK_[H]; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D TVNIR_1917 pefL_[H]; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D TVNIR_3835 exeL_[H]; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D TVNIR_1916 general secretion pathway protein, putative K02462 gspM; general secretion pathway protein M
D TVNIR_3834 outM_[H]; General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D TVNIR_1915 hypothetical protein K02463 gspN; general secretion pathway protein N
D TVNIR_3833 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D TVNIR_2590 tapD_[H]; Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVNIR_0050 pilE_[H]; Fimbrial protein precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D TVNIR_2588 pilB_[H]; Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D TVNIR_2589 pilC_[H]; Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D TVNIR_0384 fimbrial protein pilin K02655 pilE; type IV pilus assembly protein PilE
D TVNIR_0532 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D TVNIR_0874 tfp pilus assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D TVNIR_3473 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D TVNIR_3472 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D TVNIR_3471 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TVNIR_3470 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TVNIR_3468 pilQ_[H]; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TVNIR_0299 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D TVNIR_0300 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVNIR_0301 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVNIR_0385 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D TVNIR_0386 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D TVNIR_1589 Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TVNIR_0383 Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D TVNIR_0533 pilus assembly protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D TVNIR_1216 putative transmembrane protein K08086 fimV; pilus assembly protein FimV
D TVNIR_2506 prepilin peptidase; typeII/IV secretion K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D TVNIR_2503 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D TVNIR_2502 hofQ_[C]; Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D TVNIR_2501 Flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D TVNIR_2500 gspE_[C]; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TVNIR_2499 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D TVNIR_2498 type II secretion system protein K12511 tadC; tight adherence protein C
D TVNIR_2497 putative pilus assembly protein K27079 tadD; tight adherence protein D
D TVNIR_2494 TadE-like protein K12513 tadE; tight adherence protein E
D TVNIR_2495 putative transmembrane protein K27080 tadG; tight adherence protein G
D TVNIR_2504 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D TVNIR_0295 yggT_[C]; Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D TVNIR_1802 comEA_[H]; Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA
D TVNIR_1816 rec2_[H]; putative hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes K02238 comEC; competence protein ComEC
D TVNIR_1555 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVNIR_2786 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVNIR_2538 Serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D TVNIR_2595 secA_[H]; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVNIR_3732 secB_[H]; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D TVNIR_2252 secD_[H]; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TVNIR_2587 secE_[H]; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVNIR_2251 secF_[H]; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TVNIR_3127 secG_[H]; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVNIR_2554 secY_[H]; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D TVNIR_3425 ffh_[H]; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVNIR_0208 ftsY_[H]; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D TVNIR_2253 yajC_[H]; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TVNIR_3807 oxaA_[H]; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVNIR_0067 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_2764 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D TVNIR_0066 tatB_[H]; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVNIR_0065 tatC_[H]; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tni02042]
D TVNIR_3427 putative hemolysin DUF21 family K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tni02022]
D TVNIR_0892 phoR_[H]; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVNIR_0891 phoB_[H]; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TVNIR_0557 Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVNIR_0556 phoP_[H]; two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVNIR_0804 envZ_[H]; Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D TVNIR_0805 ompR_[H]; two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D TVNIR_1100 pcoS_[H]; Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D TVNIR_1101 irlR_[H]; DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D TVNIR_0271 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_1756 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_2713 narQ_[H]; Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D TVNIR_0215 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_0272 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_1757 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_2714 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_3847 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D TVNIR_2491 nodV_[H]; Sensory box histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D TVNIR_2490 degU_[H]; DNA-binding response regulator, LuxR family K27077 pprB; two-component system, NarL family, response regulator PprB
D TVNIR_0538 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVNIR_0537 algR_[H]; response regulator receiver protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D TVNIR_3736 ntrB_[H]; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVNIR_3735 glnG_[H]; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TVNIR_0421 ntrY_[H]; Nitrogen regulation protein ntrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVNIR_0422 ntrX_[H]; Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TVNIR_0954 Fis family two component sigma-54 specific transcriptional regulator - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_1538 sigma54 specific transcriptional regulator, Fis family - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_3094 two component, sigma54 specific, transcriptional regulator, Fis family - like protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVNIR_2752 atoC_[H]; Response regulator of zinc sigma-54-dependent two-component system K07714 atoC; two-component system, NtrC family, response regulator AtoC
D TVNIR_2515 pilS_[H]; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVNIR_2516 Fis family two component sigma-54 specific transcriptional regulator - like protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVNIR_1313 hoxX_[H]; Hydrogenase assembly protein HoxX K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D TVNIR_0953 sensor histidine kinase - like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D TVNIR_1516 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TVNIR_1363 fixJ_[H]; Two-component nitrogen fixation transcriptional regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D TVNIR_2423 nrtC_[H]; Nitrate ABC transporter, nitrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D TVNIR_2416 luxQ_[H]; PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:tni02035]
D TVNIR_3060 cheR_[H]; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVNIR_2516 Fis family two component sigma-54 specific transcriptional regulator - like protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVNIR_2515 pilS_[H]; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVNIR_0299 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D TVNIR_0300 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVNIR_0301 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVNIR_0050 pilE_[H]; Fimbrial protein precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D TVNIR_2588 pilB_[H]; Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D TVNIR_2589 pilC_[H]; Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D TVNIR_2590 tapD_[H]; Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVNIR_0874 tfp pilus assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D TVNIR_3468 pilQ_[H]; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TVNIR_3470 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TVNIR_3471 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TVNIR_3472 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D TVNIR_3473 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D TVNIR_1589 Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TVNIR_0385 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D TVNIR_0386 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D TVNIR_0384 fimbrial protein pilin K02655 pilE; type IV pilus assembly protein PilE
D TVNIR_0532 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D TVNIR_2504 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D TVNIR_2506 prepilin peptidase; typeII/IV secretion K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D TVNIR_2503 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D TVNIR_2502 hofQ_[C]; Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D TVNIR_2501 Flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D TVNIR_2500 gspE_[C]; Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tni04812]
D TVNIR_1310 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D TVNIR_2687 mreB_[H]; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVNIR_2598 ftsZ_[H]; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVNIR_2599 ftsA_[H]; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TVNIR_1408 minC_[H]; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TVNIR_1409 minD_[H]; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TVNIR_1410 minE_[H]; Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D TVNIR_0545 soj_[H]; ATPase, ParA family K03496 parA; chromosome partitioning protein
D TVNIR_2944 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D TVNIR_3029 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D TVNIR_3707 sopA_[C]; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D TVNIR_3708 parB_[H]; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tni04147]
D TVNIR_3416 htpG_[H]; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TVNIR_3070 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVNIR_1888 eno_[H]; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVNIR_0341 gapA_[H]; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVNIR_0342 pgk_[H]; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVNIR_0343 pykA_[H]; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_0987 pyk_[H]; Pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVNIR_2720 ahpC_[C]; Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D TVNIR_0484 groL_[H]; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVNIR_3151 dnaK_[H]; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TVNIR_2808 pgi1_[H]; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVNIR_3086 guaB_[H]; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TVNIR_2576 tuf1_[H]; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D TVNIR_0812 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TVNIR_2242 ldh_[H]; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TVNIR_0881 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1037 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_1095 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D TVNIR_3391 putative ATLS1-like light-inducible protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TVNIR_1035 pcaF_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_1242 phbA_[H]; 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TVNIR_0338 ahcY_[H]; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVNIR_3622 adk_[H]; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TVNIR_3830 argH_[H]; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVNIR_2656 argG_[H]; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVNIR_1507 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_3769 fbp_[H]; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVNIR_1265 glgB_[H]; 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TVNIR_1325 glpK_[H]; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TVNIR_3638 glnA_[H]; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVNIR_0409 hemB_[H]; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TVNIR_3462 ydjH_[C]; Ketohexokinase K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TVNIR_0815 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TVNIR_1812 serA_[H]; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVNIR_0233 purH_[H]; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVNIR_2664 lpdA_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_3402 lpd_[H]; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVNIR_1536 gdhA_[C]; Glu/Leu/Phe/Val dehydrogenase dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVNIR_2825 zwf_[H]; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TVNIR_3128 tpiA_[H]; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tni02048]
D TVNIR_1486 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TVNIR_2451 ygbT_[C]; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TVNIR_1485 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D TVNIR_1488 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D TVNIR_2450 CRISPR-associated helicase Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TVNIR_2449 CRISPR-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1
D TVNIR_2448 CRISPR-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2
D TVNIR_2447 CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D TVNIR_2446 CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D TVNIR_1459 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D TVNIR_1460 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D TVNIR_1461 CRISPR-associated RAMP Csm3 K09002 csm3; CRISPR-associated protein Csm3
D TVNIR_1462 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D TVNIR_1463 CRISPR-associated protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D TVNIR_1473 CRISPR-associated RAMP Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D TVNIR_1474 CRISPR-associated RAMP Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D TVNIR_1475 CRISPR-associated RAMP Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D TVNIR_1476 CRISPR-associated RAMP Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D TVNIR_1477 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D TVNIR_1478 CRISPR-associated RAMP Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6
D TVNIR_1481 putative CRISPR-associated protein, VVA1548 family K19145 csx16; CRISPR-associated protein Csx16
D TVNIR_1050 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVNIR_1853 hsdR_[C]; Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVNIR_2314 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVNIR_1045 hsdS_[H]; Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TVNIR_1858 hsdS_[C]; Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TVNIR_1043 hsdM_[C]; Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVNIR_1859 hsdM_[H]; Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVNIR_0042 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_1736 phage DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_2442 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TVNIR_3294 Type III restriction-modification enzyme, helicase subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D TVNIR_3291 mod_[H]; putative DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D TVNIR_1691 Mrr restriction system protein K07448 mrr; restriction system protein
D TVNIR_0054 PemK family protein; Transcriptional Modulator Of MazE/xin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D TVNIR_0654 chpR_[C]; Programmed cell death antitoxin MazE K07172 mazE; antitoxin MazE
D TVNIR_0620 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D TVNIR_0645 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D TVNIR_0664 RelE/StbE replicon stabilization toxin K06218 relE; mRNA interferase RelE/StbE
D TVNIR_3306 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D TVNIR_0619 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_0644 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_0663 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_3308 CopG-like domain-containing protein DNA-binding K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TVNIR_2845 YafQ toxin protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D TVNIR_0623 dinJ_[H]; DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D TVNIR_0626 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D TVNIR_0637 dinJ_[C]; DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D TVNIR_0659 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D TVNIR_1155 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D TVNIR_1154 putative antitoxin of toxin-antitoxin stability system K19159 yefM; antitoxin YefM
D TVNIR_0722 HIPA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_0741 HIPA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_1249 hipA_[H]; HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TVNIR_0628 Uncharacterized protein family UPF0150 K18843 hicB; antitoxin HicB
D TVNIR_0653 Uncharacterized protein family UPF0150 K18843 hicB; antitoxin HicB
D TVNIR_0674 Uncharacterized protein family UPF0150 K18843 hicB; antitoxin HicB
D TVNIR_0035 CcdB-like toxin protein K19163 ccdB; toxin CcdB
D TVNIR_0034 acetoacetyl-CoA synthase K19164 ccdA; antitoxin CcdA
D TVNIR_0750 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D TVNIR_3309 RelE/ParE family plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D TVNIR_3678 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D TVNIR_0631 parD4_[H]; ParD protein (antitoxin to ParE) K07746 parD1_3_4; antitoxin ParD1/3/4
D TVNIR_3310 Putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4
D TVNIR_3677 putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D TVNIR_0027 Prevent-host-death protein K19165 phd; antitoxin Phd
D TVNIR_0678 putative membrane protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D TVNIR_0523 HigB toxin protein K07334 higB-1; toxin HigB-1
D TVNIR_0908 HigB toxin protein K07334 higB-1; toxin HigB-1
D TVNIR_0618 Helix-turn-helix motif protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0636 helix-hairpin-helix DNA-binding motif-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0679 Helix-turn-helix motif protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_1049 XRE family transcriptional regulator, plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D TVNIR_0522 vapI_[H]; putative Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D TVNIR_0909 XRE family transcriptional regulator, plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D TVNIR_0727 hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D TVNIR_0728 mqsA_[H]; putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D TVNIR_0016 vapC_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVNIR_0519 vapC2_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVNIR_2282 vapC1_[H]; VapC toxin protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVNIR_0520 VapB protein (antitoxin to VapC) K18829 mvpT; antitoxin VapB
D TVNIR_1149 putative virulence-associated protein K18829 mvpT; antitoxin VapB
D TVNIR_2283 vapB1_[H]; virulence-associated like protein K18829 mvpT; antitoxin VapB
D TVNIR_0511 PilT protein domain protein K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D TVNIR_0513 pilus retraction motor protein PilT K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D TVNIR_0015 Prevent-Host-Death Family Protein K28280 vapB22; antitoxin VapB22
D TVNIR_0512 prevent-host-death family protein K28280 vapB22; antitoxin VapB22
D TVNIR_0514 hypothetical protein K28280 vapB22; antitoxin VapB22
D TVNIR_0771 vapC44_[H]; PIN domain family protein K28143 vapC24S; ribonuclease VapC24/25/29/31/33/37/38/39/41/43/44/48 [EC:3.1.-.-]
D TVNIR_0772 hypothetical protein K28144 vapB24S; antitoxin VapB24/25/29/31/33/37/38/39/41/43/44/48
D TVNIR_2264 PilT protein domain-containing protein K19686 vapC28S; ribonuclease VapC28/30/34/36/42 [EC:3.1.-.-]
D TVNIR_3857 PilT protein domain protein K19686 vapC28S; ribonuclease VapC28/30/34/36/42 [EC:3.1.-.-]
D TVNIR_2265 vapB30_[H]; Rv0623 family protein transcription factor K19687 vapB28S; antitoxin VapB28/30/34/36/42
D TVNIR_3856 Rv0623 family protein transcription factor K19687 vapB28S; antitoxin VapB28/30/34/36/42
D TVNIR_0033 VapB protein (antitoxin to VapC) K21495 fitA; antitoxin FitA
D TVNIR_2598 ftsZ_[H]; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVNIR_2687 mreB_[H]; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVNIR_3194 parC_[H]; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVNIR_2784 parE_[H]; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVNIR_1359 gltX2_[H]; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVNIR_1447 nitrogen-fixing NifU domain protein K19168 cptA; toxin CptA
D TVNIR_0031 Protein of unknown function DUF86 K28186 hepT; HepT family RNase toxin
D TVNIR_0026 DNA polymerase, beta-like region K28187 mntA; MntA family adenylyltransferase antitoxin
D TVNIR_1676 iscS_[H]; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:tni04090]
C 01504 Antimicrobial resistance genes [BR:tni01504]
D TVNIR_2854 drrB_[H]; ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TVNIR_2853 drrA_[H]; putative ABC transporter ATP-binding component K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVNIR_1670 vgb_[H]; putative streptogramin lyase, gluconolactonase family K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D TVNIR_1100 pcoS_[H]; Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D TVNIR_1101 irlR_[H]; DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D TVNIR_0557 Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVNIR_0556 phoP_[H]; two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVNIR_0276 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0800 multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_1200 yegM_[C]; putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2908 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2922 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_2948 Efflux transporter, RND family, MFP subunit, AcrA/E family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_3390 mdtA_[H]; multidrug-efflux system secretion protein, HlyD family K03585 acrA; membrane fusion protein, multidrug efflux system
D TVNIR_0277 acrD_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_0801 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_1199 acrB_[C]; RND multidrug efflux transporter; Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2923 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2947 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_3389 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TVNIR_2511 arpC_[H]; outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_2924 Outer membrane efflux protein K12340 tolC; outer membrane protein
D TVNIR_3630 tolC_[H]; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tni00537]
D TVNIR_1094 ycjT_[C]; Trehalose-6-phosphate phosphatase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tni03100]
D TVNIR_t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t17 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t40 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVNIR_t02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t12 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVNIR_t16 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TVNIR_t28 tRNA-Asn K14221 tRNA-Asp; tRNA Asp
D TVNIR_t11 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TVNIR_t27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVNIR_t37 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVNIR_t09 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TVNIR_t10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t44 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVNIR_t34 tRNA-His K14226 tRNA-His; tRNA His
D TVNIR_t41 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TVNIR_t05 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t30 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t38 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVNIR_t33 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVNIR_t39 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVNIR_t03 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t31 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t42 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVNIR_t43 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TVNIR_t01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t20 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVNIR_t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t15 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t19 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVNIR_t22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t45 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVNIR_t23 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TVNIR_t26 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TVNIR_t07 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t13 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t29 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVNIR_t04 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D TVNIR_r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVNIR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TVNIR_r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TVNIR_0576 yueD_[H]; alcohol dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D TVNIR_1995 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TVNIR_2936 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TVNIR_3348 qor_[H]; Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase); arginate lyase - like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D TVNIR_2760 thiocyanate dehydrogenase K24299 tcdH; thiocyanate desulfurase [EC:1.8.2.7]
D TVNIR_0429 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TVNIR_3540 msrAB_[H]; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TVNIR_0278 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TVNIR_3364 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TVNIR_3539 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TVNIR_3247 hdrA_[H]; CoB--CoM heterodisulfide reductase subunit A K28385 hdrA; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit A [EC:1.8.4.17]
D TVNIR_3244 hdrB_[H]; CoB--CoM heterodisulfide reductase subunit B K28386 hdrB; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit B [EC:1.8.4.17]
D TVNIR_3248 hdlB_[H]; CoB--CoM heterodisulfide reductase subunit B K28386 hdrB; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit B [EC:1.8.4.17]
D TVNIR_3245 hdlC_[H]; CoB--CoM heterodisulfide reductase subunit C K28387 hdrC; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit C [EC:1.8.4.17]
D TVNIR_3249 CoB--CoM heterodisulfide reductase subunit C K28387 hdrC; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit C [EC:1.8.4.17]
D TVNIR_3269 yqjG_[H]; Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D TVNIR_2429 yedY_[H]; Putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D TVNIR_2741 mauG_[H]; cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D TVNIR_3162 ccp_[H]; Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D TVNIR_1132 chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D TVNIR_3437 bcp_[H]; Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TVNIR_1193 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TVNIR_1613 yhhW_[C]; Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TVNIR_0846 ybiX_[C]; 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D TVNIR_1106 pcoA_[H]; Multicopper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D TVNIR_1518 Phytoene desaturase, pro-zeta-carotene producing K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D TVNIR_0549 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TVNIR_0890 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TVNIR_3393 yfgD_[H]; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D TVNIR_0977 psrA_[H]; arsenate respiratory reductase K28466 arrA; arsenate reductase (donor) subunit ArrA [EC:1.20.99.1]
D TVNIR_1311 pflA_[C]; Radical SAM domain, pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TVNIR_1344 pcm2_[H]; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVNIR_2739 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVNIR_2958 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVNIR_3629 pcm1_[H]; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVNIR_2188 cfa_[H]; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVNIR_2709 cfa_[C]; S-adenosyl-L-methionine dependent methyltransferase, cyclopropane-fatty-acyl-phospholipid synthase - like protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVNIR_2245 Methyltransferase type 12 K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D TVNIR_2540 lnt_[H]; Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TVNIR_1081 plsC_[H]; 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D TVNIR_0796 yjhQ_[H]; GCN5-related N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D TVNIR_1160 yncA_[H]; phosphinothricin N-acetyltransferase, putative K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D TVNIR_2932 aat_[H]; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D TVNIR_1229 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D TVNIR_0237 ate_[H]; Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D TVNIR_1077 lgt_[H]; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TVNIR_1896 Glutamine-scyllo-inositol transaminase -like protein K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D TVNIR_0310 rnfF_[H]; Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TVNIR_3559 ydiA_[C]; ATP/GTP-binding protein; DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D TVNIR_0090 UDP-galactose-lipid carrier transferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D TVNIR_0502 glnE_[H]; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D TVNIR_1131 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D TVNIR_2323 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D TVNIR_3512 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D TVNIR_2248 aceK_[H]; Isocitrate dehydrogenase phosphatase/kinase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D TVNIR_2645 hprK_[H]; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D TVNIR_1185 ymdB_[C]; Appr-1-p processing domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D TVNIR_3373 ybgC_[C]; 4-hydroxybenzoyl-CoA thioesterase family active site protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TVNIR_1381 ywqE_[H]; Manganese-dependent protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D TVNIR_1276 sixA_[C]; Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D TVNIR_2417 Response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D TVNIR_3458 tatD_[H]; Deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TVNIR_3646 yjjV_[H]; Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TVNIR_0417 def_[H]; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TVNIR_3406 yafV_[C]; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D TVNIR_1369 yceF_[C]; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D TVNIR_1231 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TVNIR_1714 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TVNIR_3363 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D TVNIR_2782 yjeF_[H]; YjeF protein, function unknown K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TVNIR_1520 Phytoene synthase K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D TVNIR_2653 mpl_[H]; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D TVNIR_1256 rtcA_[H]; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D TVNIR_2892 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D TVNIR_2382 rnfD_[H]; Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D TVNIR_2381 rnfC_[H]; Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D TVNIR_2380 rnfB_[H]; Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D TVNIR_0199 Copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D TVNIR_0143 lutA_[H]; putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D TVNIR_0144 ykgF_[H]; putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF
C 99982 Energy metabolism
D TVNIR_1450 fdxA_[H]; 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin
D TVNIR_2383 rnfG_[H]; Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D TVNIR_2384 rnfE_[H]; Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D TVNIR_2379 rnfA_[H]; Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D TVNIR_3083 nifU_[H]; Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 K04488 iscU; nitrogen fixation protein NifU and related proteins
D TVNIR_1658 norD_[H]; Nitric oxide reductase activation protein NorD K02448 norD; nitric oxide reductase NorD protein
D TVNIR_1657 norQ_[H]; Nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D TVNIR_1328 periplasmic nitrate reductase component NapD K02570 napD; periplasmic nitrate reductase NapD
D TVNIR_1327 napF_[H]; Ferredoxin-type protein NapF (periplasmic nitrate reductase) K02572 napF; ferredoxin-type protein NapF
D TVNIR_2033 torY_[H]; cytochrome c-type protein YecK K02569 napC; NapC/NirT family cytochrome c
D TVNIR_1330 napG_[H]; Ferredoxin-type protein NapG (periplasmic nitrate reductase) K02573 napG; ferredoxin-type protein NapG
D TVNIR_1331 mauN_[H]; Polyferredoxin NapH (periplasmic nitrate reductase) K02574 napH; ferredoxin-type protein NapH
D TVNIR_1642 nirC_[H]; Cytochrome c55X precursor NirC K19344 nirC; cytochrome c55X
D TVNIR_1643 nirF_[H]; Heme d1 biosynthesis protein NirF K19345 nirF; protein NirF
D TVNIR_0855 tRNA 2-thiouridine synthesizing protein E; Dissimilatory sulfite reductase, gamma subunit K23077 dsrC; dissimilatory sulfite reductase related protein
D TVNIR_1089 protein of unknown function DUF1458 K09165 K09165; dodecin
D TVNIR_2882 Dodecin, Flavin-binding protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TVNIR_0298 yggS_[C]; alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D TVNIR_1648 pqqE_[H]; Heme d1 biosynthesis protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D TVNIR_0089 ubiB_[H]; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D TVNIR_0088 yigP_[C]; Sterol-binding domain protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D TVNIR_0184 yqiC_[H]; protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D TVNIR_2791 mobB_[H]; Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D TVNIR_1525 DoxX family protein K15977 K15977; putative oxidoreductase
D TVNIR_2915 yfiQ_[H]; Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative K09181 yfiQ; acetyltransferase
D TVNIR_0976 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K28467 arrB; arsenate reductase (donor) iron-sulfur subunit ArrB
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TVNIR_1527 cspC_[H]; cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D TVNIR_3637 cspA_[H]; cold-shock domain family protein K03704 cspA; cold shock protein
D TVNIR_0435 Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D TVNIR_2463 yhgF_[H]; Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D TVNIR_0616 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
D TVNIR_0681 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
D TVNIR_2184 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D TVNIR_1577 clpS_[H]; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D TVNIR_2775 tig_[H]; Cell division trigger factor K03545 tig; trigger factor
D TVNIR_2428 yedZ_[H]; Ferric reductase transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D TVNIR_0978 fdhE_[H]; formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein
D TVNIR_3161 smpB_[H]; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D TVNIR_2039 hypC_[H]; [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D TVNIR_2051 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC
D TVNIR_2038 hypD_[H]; [NiFe] hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D TVNIR_2037 hupE_[H]; [NiFe] hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D TVNIR_2043 hypF2_[H]; [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF
D TVNIR_0183 comM_[H]; MG(2+) chelatase family protein / ComM-related protein K07391 comM; magnesium chelatase family protein
D TVNIR_3546 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D TVNIR_3101 20S proteasome subunits A and B K07395 K07395; putative proteasome-type protease
D TVNIR_1601 DSBA oxidoreductase K07396 K07396; putative protein-disulfide isomerase
D TVNIR_0362 yhfA_[H]; OsmC/Ohr family protein K07397 yhfA; putative redox protein
D TVNIR_3071 SelT/selW/selH selenoprotein K07401 K07401; selenoprotein W-related protein
D TVNIR_2789 yqeZ_[H]; membrane-bound serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D TVNIR_0395 radC_[C]; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D TVNIR_1521 rmuC_[H]; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D TVNIR_2616 yraN_[C]; putative endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D TVNIR_0770 Excinuclease ABC, C subunit-like protein K07461 K07461; putative endonuclease
D TVNIR_0794 Excinuclease ABC, C subunit-like protein K07461 K07461; putative endonuclease
D TVNIR_0415 smf_[H]; Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D TVNIR_2927 rarA_[H]; AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D TVNIR_0834 Polysaccharide biosynthesis protein WlaX K07501 K07501; 3'-5' exonuclease
D TVNIR_0927 Mobile element protein K07483 K07483; transposase
D TVNIR_2846 transposase IS3/IS911 family protein K07483 K07483; transposase
D TVNIR_0043 putative transposase IS66 K07484 K07484; transposase
D TVNIR_0328 Transposase IS66 K07484 K07484; transposase
D TVNIR_0921 Putative transposase K07484 K07484; transposase
D TVNIR_1491 transposase, IS66 family K07484 K07484; transposase
D TVNIR_1737 transposase, IS66 family K07484 K07484; transposase
D TVNIR_2441 transposase IS66 K07484 K07484; transposase
D TVNIR_2840 Mobile element protein K07484 K07484; transposase
D TVNIR_2841 transposase, IS66 family K07484 K07484; transposase
D TVNIR_2895 Transposase K07484 K07484; transposase
D TVNIR_3532 Mobile element protein K07484 K07484; transposase
D TVNIR_0019 Il-IS_2, transposase K07485 K07485; transposase
D TVNIR_0013 transposase K07486 K07486; transposase
D TVNIR_0391 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TVNIR_0399 transposase K07486 K07486; transposase
D TVNIR_0400 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TVNIR_0444 transposase K07486 K07486; transposase
D TVNIR_0565 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TVNIR_0696 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TVNIR_2409 transposase K07486 K07486; transposase
D TVNIR_2530 transposase K07486 K07486; transposase
D TVNIR_2771 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TVNIR_3822 transposase K07486 K07486; transposase
D TVNIR_0040 putative transposase K07491 rayT; REP-associated tyrosine transposase
D TVNIR_1397 regulatory protein LacI K07491 rayT; REP-associated tyrosine transposase
D TVNIR_2275 yafM_[H]; Transposase-like protein K07491 rayT; REP-associated tyrosine transposase
D TVNIR_0121 Integrase catalytic region K07497 K07497; putative transposase
D TVNIR_0784 integrase catalytic subunit K07497 K07497; putative transposase
D TVNIR_3280 Mobile element protein K07497 K07497; putative transposase
D TVNIR_1248 intQ_[C]; Phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D TVNIR_0810 ybaB_[C]; Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TVNIR_3756 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D TVNIR_2015 pitA_[C]; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TVNIR_1004 Pantothenate:Na+ symporter / Sodium-dependent multivitamin transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D TVNIR_3160 Sodium-dependent transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TVNIR_2343 yaaJ_[C]; Sodium/glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D TVNIR_2059 yocS_[H]; putative transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D TVNIR_1905 cotH_[H]; Protein of spore coat assembly - like protein K06330 cotH; spore coat protein H
D TVNIR_3033 ycgB_[H]; SpoVR family protein K06415 spoVR; stage V sporulation protein R
D TVNIR_3727 envC_[H]; transcriptional regulator, Fis family K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D TVNIR_0382 typA_[H]; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D TVNIR_1761 CBS domain protein K07168 K07168; CBS domain-containing membrane protein
D TVNIR_3360 acetoin utilization protein AcuB K07168 K07168; CBS domain-containing membrane protein
D TVNIR_2543 ybeZ_[H]; Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TVNIR_3436 ylaK_[H]; putative ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
D TVNIR_3031 yeaG_[H]; Serine protein kinase (prkA protein), P-loop containing K07180 prkA; serine protein kinase
D TVNIR_3095 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D TVNIR_3098 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D TVNIR_2370 ygiM_[C]; bacterial SH3 type 3 domain-containing protein K07184 ygiM; SH3 domain protein
D TVNIR_2119 yajQ_[C]; protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D TVNIR_2928 lolA_[H]; Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D TVNIR_2675 lolB_[H]; Outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D TVNIR_2655 vacJ_[C]; VacJ-like lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D TVNIR_1963 skp_[H]; Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D TVNIR_2956 ygeR_[C]; Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D TVNIR_0246 yeaY_[H]; outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D TVNIR_0247 yeaY_[C]; outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D TVNIR_3591 asmA_[H]; AsmA family protein K07289 asmA; AsmA protein
D TVNIR_2510 HlyD family secretion protein K02005 ABC.CD.TX; HlyD family secretion protein
D TVNIR_2795 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D TVNIR_0267 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D TVNIR_2025 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D TVNIR_0263 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D TVNIR_0264 cycH_[H]; Cytochrome c heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D TVNIR_0270 Cytochrome c heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D TVNIR_2030 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D TVNIR_2031 Cytochrome c heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D TVNIR_0875 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D TVNIR_0900 phoU_[H]; Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D TVNIR_2474 BFD domain protein (2Fe-2S)-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D TVNIR_1289 opgG_[H]; Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D TVNIR_0478 cutA_[H]; Periplasmic divalent cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D TVNIR_2211 apaG_[H]; ApaG protein K06195 apaG; ApaG protein
D TVNIR_1074 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D TVNIR_1635 nosD_[H]; Nitrous oxide reductase maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D TVNIR_0600 hmuS_[H]; Hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
D TVNIR_0591 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
D TVNIR_1776 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
D TVNIR_1704 ychN_[H]; DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
D TVNIR_0488 Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL K19342 nosL; copper chaperone NosL
D TVNIR_0489 twin-arginine translocation pathway signal K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TVNIR_1225 cvpA_[H]; Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D TVNIR_0152 yprA_[H]; ATP-dependent RNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D TVNIR_2258 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D TVNIR_0448 Cyanoglobin; Hemoglobin-like protein HbN K06886 glbN; hemoglobin
D TVNIR_3362 Hemoglobin-like protein HbO K06886 glbN; hemoglobin
D TVNIR_1097 ychK_[C]; UPF0028 protein YchK K07001 K07001; NTE family protein
D TVNIR_1202 ylbK_[H]; Patatin K07001 K07001; NTE family protein
D TVNIR_3445 erpA_[H]; putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D TVNIR_1843 sufB_[C]; Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D TVNIR_1840 sufD_[C]; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D TVNIR_2190 rbn_[C]; Ribonuclease BN K07058 K07058; membrane protein
D TVNIR_0482 fxsA_[H]; FxsA K07113 fxsA; UPF0716 protein FxsA
D TVNIR_1842 ygdK_[C]; Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D TVNIR_2976 sufE_[H]; Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D TVNIR_1573 hflD_[H]; High frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein
D TVNIR_3817 lemA_[H]; LemA K03744 lemA; LemA protein
D TVNIR_2111 SlyX family protein K03745 slyX; SlyX protein
D TVNIR_0414 smg_[H]; Protein of unknown function Smg K03747 smg; Smg protein
D TVNIR_2692 sprT_[H]; Protein of unknown function SprT K02742 sprT; SprT protein
D TVNIR_3481 damX_[C]; Sporulation domain-containing protein K03112 damX; DamX protein
D TVNIR_1103 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
D TVNIR_1562 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
D TVNIR_3317 ychJ_[C]; UPF0225 protein YchJ K09858 K09858; SEC-C motif domain protein
D TVNIR_2461 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein
D TVNIR_1431 Phosphate-starvation-inducible E-like protein K13256 psiE; protein PsiE
D TVNIR_1434 Phosphate-starvation-inducible E-like protein K13256 psiE; protein PsiE
C 99997 Function unknown
D TVNIR_1633 yahD_[C]; Ankyrin K06867 K06867; uncharacterized protein
D TVNIR_1078 Thymidylate kinase K06888 K06888; uncharacterized protein
D TVNIR_2065 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D TVNIR_2389 Thymidylate kinase K06888 K06888; uncharacterized protein
D TVNIR_3388 yfhR_[C]; alpha/beta hydrolase fold containing protein K06889 K06889; uncharacterized protein
D TVNIR_2138 Phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D TVNIR_2147 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D TVNIR_1771 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D TVNIR_1850 yfjP_[C]; GTP-binding protein Era K06946 K06946; uncharacterized protein
D TVNIR_2514 hypothetical protein K06950 K06950; uncharacterized protein
D TVNIR_2707 Amine oxidase, FAD dependent K06954 K06954; uncharacterized protein
D TVNIR_1411 yugP_[H]; peptidase, membrane zinc metallopeptidase, putative K06973 K06973; uncharacterized protein
D TVNIR_1998 Cocaine esterase-like protein K06978 K06978; uncharacterized protein
D TVNIR_3005 Cocaine esterase-like protein K06978 K06978; uncharacterized protein
D TVNIR_0887 Succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D TVNIR_2505 bacteriocin resistance protein, putative K06992 K06992; uncharacterized protein
D TVNIR_2465 putative enzyme of the cupin superfamily protein K06995 K06995; uncharacterized protein
D TVNIR_3519 Glyoxalase family protein K06996 K06996; uncharacterized protein
D TVNIR_1351 putative transport protein K07003 K07003; uncharacterized protein
D TVNIR_1706 transporter, putative K07003 K07003; uncharacterized protein
D TVNIR_1340 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein
D TVNIR_1181 yheT_[H]; Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K07019 K07019; uncharacterized protein
D TVNIR_2968 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein
D TVNIR_1170 yecA_[H]; YecA family protein K07039 K07039; uncharacterized protein
D TVNIR_0028 nucleic acid-binding protein contains PIN domain-like K07063 K07063; uncharacterized protein
D TVNIR_0736 Nucleotide binding protein PINc K07063 K07063; uncharacterized protein
D TVNIR_0764 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D TVNIR_1482 PilT protein domain protein K07063 K07063; uncharacterized protein
D TVNIR_0529 PilT protein domain-containing protein K07064 K07064; uncharacterized protein
D TVNIR_0622 PilT protein-like protein K07064 K07064; uncharacterized protein
D TVNIR_0630 PilT protein domain-containing protein K07064 K07064; uncharacterized protein
D TVNIR_0639 PilT protein-like protein K07064 K07064; uncharacterized protein
D TVNIR_0717 PilT domain-containing protein K07064 K07064; uncharacterized protein
D TVNIR_0792 PilT domain-containing protein K07064 K07064; uncharacterized protein
D TVNIR_0017 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D TVNIR_2266 DNA polymerase beta domain-containing protein K07075 K07075; uncharacterized protein
D TVNIR_2919 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D TVNIR_3300 DNA polymerase beta domain-containing protein K07075 K07075; uncharacterized protein
D TVNIR_2880 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D TVNIR_3793 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D TVNIR_2980 putative sodium-dependent bicarbonate transporter K07086 K07086; uncharacterized protein
D TVNIR_2437 permease K07089 K07089; uncharacterized protein
D TVNIR_0388 Permease - like protein DUF81 K07090 K07090; uncharacterized protein
D TVNIR_0888 putative permease K07090 K07090; uncharacterized protein
D TVNIR_2400 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TVNIR_3347 yfcA_[C]; Permease - like protein DUF81 K07090 K07090; uncharacterized protein
D TVNIR_3455 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TVNIR_3511 putative permease K07090 K07090; uncharacterized protein
D TVNIR_1605 50S ribosomal protein L33 K07092 K07092; uncharacterized protein
D TVNIR_3242 DsrE family protein K07092 K07092; uncharacterized protein
D TVNIR_3384 50S ribosomal protein L33 K07092 K07092; uncharacterized protein
D TVNIR_3510 Putative phosphatase K07093 K07093; uncharacterized protein
D TVNIR_3616 hypothetical protein K07095 K07095; uncharacterized protein
D TVNIR_1188 Xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D TVNIR_3017 yeeE_[H]; YeeE/YedE family protein K07112 K07112; uncharacterized protein
D TVNIR_3272 yhjN_[H]; Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D TVNIR_2615 lpoA_[H]; LppC putative lipoprotein K07121 K07121; uncharacterized protein
D TVNIR_0893 ybeQ_[C]; Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVNIR_1272 ybeT_[C]; Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVNIR_2718 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVNIR_3217 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVNIR_0724 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein
D TVNIR_2651 N-terminal domain of Lon protease - like uncharacterized protein K07157 K07157; uncharacterized protein
D TVNIR_3808 yidD_[C]; Protein YidD K08998 K08998; uncharacterized protein
D TVNIR_1183 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D TVNIR_0165 hypothetical protein K09004 K09004; uncharacterized protein
D TVNIR_0374 hypothetical protein K09004 K09004; uncharacterized protein
D TVNIR_1086 protein of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TVNIR_2016 hypothetical protein K09004 K09004; uncharacterized protein
D TVNIR_3050 hypothetical protein K09004 K09004; uncharacterized protein
D TVNIR_0457 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D TVNIR_3477 yqeY_[H]; Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D TVNIR_1335 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D TVNIR_0715 Protein of unknown function superfamily K09132 K09132; uncharacterized protein
D TVNIR_2858 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D TVNIR_1309 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D TVNIR_2198 ybeD_[C]; putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D TVNIR_0330 hypothetical protein K09700 K09700; uncharacterized protein
D TVNIR_3430 hypothetical protein K09700 K09700; uncharacterized protein
D TVNIR_2708 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D TVNIR_0579 yaiI_[C]; Protein YaiI K09768 K09768; uncharacterized protein
D TVNIR_1423 yciI_[H]; YciL protein K09780 K09780; uncharacterized protein
D TVNIR_3032 yeaH_[C]; UPF0229 protein YeaH K09786 K09786; uncharacterized protein
D TVNIR_0841 ycaR_[C]; protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D TVNIR_0293 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D TVNIR_0490 hypothetical protein K09792 K09792; uncharacterized protein
D TVNIR_2767 hypothetical protein K09792 K09792; uncharacterized protein
D TVNIR_2395 hypothetical protein K09793 K09793; uncharacterized protein
D TVNIR_3158 yfjF_[C]; UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D TVNIR_0646 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D TVNIR_0665 hypothetical protein K09803 K09803; uncharacterized protein
D TVNIR_0672 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D TVNIR_3858 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D TVNIR_1060 ygfB_[C]; Uncharacterized protein family UPF0149 (YgfB) K09895 K09895; uncharacterized protein
D TVNIR_0381 ycgL_[C]; putative transmembrane protein K09902 K09902; uncharacterized protein
D TVNIR_3206 yhcB_[C]; protein of unknown function DUF1043 K09908 K09908; uncharacterized protein
D TVNIR_0580 yaiL_[H]; putative nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D TVNIR_2931 hypothetical protein K09919 K09919; uncharacterized protein
D TVNIR_1449 yqiB_[C]; protein of unknown function DUF1249 K09920 K09920; uncharacterized protein
D TVNIR_0082 yigA_[C]; Protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D TVNIR_2182 FixH family protein K09926 K09926; uncharacterized protein
D TVNIR_1817 Protein of unknown function DUF2062 K09928 K09928; uncharacterized protein
D TVNIR_1027 Protein of unknown function DUF2063 K09929 K09929; uncharacterized protein
D TVNIR_1028 protein of unknown function DUF692 K09930 K09930; uncharacterized protein
D TVNIR_2887 protein of unknown function DUF2064 K09931 K09931; uncharacterized protein
D TVNIR_3265 Protein of unknown function DUF2065 K09937 K09937; uncharacterized protein
D TVNIR_2657 hypothetical protein K09956 K09956; uncharacterized protein
D TVNIR_3271 Protein of unknown function DUF2237 K09966 K09966; uncharacterized protein
D TVNIR_0153 yprB_[H]; Putative exonuclease; RNase_H superfamily K07502 yprB; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 4, 2025