+E Transcription factors KO
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Transcription Factors - Tetragenococcus osmophilus
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D C7K38_09740 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D C7K38_00935 methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
C LysR family
D C7K38_00595 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D C7K38_04700 DeoR family transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D C7K38_08575 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D C7K38_09875 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D C7K38_07910 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D C7K38_01035 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
C LacI family
D C7K38_05470 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C7K38_11105 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C7K38_08470 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D C7K38_04195 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D C7K38_02235 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D C7K38_00205 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D C7K38_03270 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
D C7K38_03325 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D C7K38_01135 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D C7K38_01410 transcriptional regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D C7K38_07975 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D C7K38_08045 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D C7K38_10965 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D C7K38_09260 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D C7K38_07880 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C7K38_11135 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D C7K38_11380 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D C7K38_02505 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D C7K38_02630 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D C7K38_03185 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
C ArsR family
D C7K38_02585 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D C7K38_02555 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D C7K38_10985 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
C PadR family
D C7K38_05380 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D C7K38_03105 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D C7K38_07340 Cro/Cl family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D C7K38_08805 MurR/RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D C7K38_01765 hypothetical protein K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D C7K38_02130 hypothetical protein K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D C7K38_04010 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D C7K38_02455 GbsR/MarR family transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D C7K38_04160 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D C7K38_01650 transcription antiterminator BglG K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D C7K38_02180 RNA polymerase subunit sigma-54 K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D C7K38_00490 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D C7K38_01235 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D C7K38_10355 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D C7K38_01970 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D C7K38_05915 transcriptional regulator K07729 K07729; putative transcriptional regulator
D C7K38_00910 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D C7K38_02005 transcription antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D C7K38_03035 transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D C7K38_01740 transcription antiterminator BglG K03483 mtlR; mannitol operon transcriptional activator
D C7K38_06080 PTS fructose transporter subunit IIA K03491 licR; probable licABCH operon transcriptional regulator
C Others
D C7K38_03505 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D C7K38_01890 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D C7K38_04530 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D C7K38_04745 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D C7K38_07225 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D C7K38_09000 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D C7K38_04065 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D C7K38_00110 PspC family transcriptional regulator K03973 pspC; phage shock protein C
D C7K38_00330 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator
D C7K38_01815 RNA polymerase subunit sigma-70 K05346 deoR; deoxyribonucleoside regulator
D C7K38_09470 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D C7K38_10015 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D C7K38_07255 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0