+D GENES KO #

  KEGG Orthology (KO) - Thermus oshimai

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tos00010] D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Theos_0032 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_1644 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1736 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_0264 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1730 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1743 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1016 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Theos_0953 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Theos_0919 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Theos_0920 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Theos_1974 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_2314 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_1756 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Theos_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Theos_0160 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Theos_0371 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Theos_2159 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Theos_0949 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Theos_0948 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Theos_2160 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_1518 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Theos_0011 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Theos_0010 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0033 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:tos00020] D Theos_0502 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Theos_1424 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Theos_1703 isocitrate dehydrogenase, NADP-dependent, prokaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Theos_0133 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Theos_0132 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0011 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Theos_0010 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Theos_0765 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Theos_0766 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Theos_1659 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Theos_1658 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Theos_1661 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Theos_1660 succinate dehydrogenase, hydrophobic anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Theos_0784 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Theos_0033 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Theos_2159 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Theos_0949 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Theos_0948 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Theos_2160 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Theos_1518 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:tos00030] D Theos_0032 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Theos_1731 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Theos_1745 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Theos_1465 fructose-6-phosphate aldolase, TalC/MipB family K00616 TALDO1; transaldolase [EC:2.2.1.2] D Theos_0857 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Theos_1204 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Theos_0732 sugar kinase, ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Theos_0211 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Theos_0655 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Theos_2399 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Theos_2403 sugar kinase, ribokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Theos_1647 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Theos_0390 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Theos_1851 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Theos_1806 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Theos_0264 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1730 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1743 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1016 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Theos_1644 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1736 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:tos00040] D Theos_2402 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Theos_1066 theronine dehydrogenase-like Zn-dependent dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D Theos_1731 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Theos_1292 D-xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Theos_1293 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Theos_0625 NAD-dependent aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D Theos_0187 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:tos00051] D Theos_1852 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Theos_0500 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Theos_0464 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Theos_0187 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Theos_2405 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_1644 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1736 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1293 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Theos_0264 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1730 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1743 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1016 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Theos_0953 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tos00052] D Theos_1374 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Theos_0839 galactose-1-phosphate uridylyltransferase, family 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Theos_1381 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Theos_0468 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_1546 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_1826 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Theos_0320 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:tos00500] D Theos_1826 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Theos_0320 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Theos_2285 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_2147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_1876 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Theos_1880 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Theos_1930 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Theos_1189 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Theos_0638 glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Theos_1280 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Theos_0032 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Theos_1852 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tos00520] D Theos_2433 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Theos_1852 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Theos_0171 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_1637 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_0894 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Theos_1589 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Theos_0225 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Theos_1129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Theos_0530 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_1374 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Theos_0839 galactose-1-phosphate uridylyltransferase, family 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Theos_1381 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Theos_0468 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_1546 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_0032 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Theos_0500 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Theos_0464 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Theos_1876 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tos00620] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1518 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Theos_0011 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Theos_0010 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Theos_2159 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Theos_0949 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Theos_0948 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Theos_2160 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Theos_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Theos_0270 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Theos_1488 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Theos_1487 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Theos_0269 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Theos_0794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_1524 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D Theos_0082 FAD/FMN-dependent dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D Theos_0867 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Theos_0409 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Theos_0875 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Theos_0741 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Theos_0784 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Theos_0883 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Theos_0033 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Theos_0160 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Theos_0371 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Theos_1801 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1227 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Theos_1228 2-isopropylmalate synthase, bacterial type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Theos_1940 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tos00630] D Theos_0115 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1801 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Theos_0502 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Theos_1424 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1583 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Theos_1159 methylmalonyl-CoA mutase family protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Theos_1158 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_1266 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_0573 FAD/FMN-dependent dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Theos_1803 FAD/FMN-dependent dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Theos_1804 FAD/FMN-dependent dehydrogenase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Theos_1805 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Theos_0558 lactate dehydrogenase-like oxidoreductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Theos_1735 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Theos_1734 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Theos_2072 serine-pyruvate aminotransferase/archaeal aspartate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_0332 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Theos_0746 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Theos_0747 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Theos_0744 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0745 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Theos_1806 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Theos_2399 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Theos_1413 dihydrodipicolinate synthase/N-acetylneuraminate lyase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Theos_1375 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D Theos_0523 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:tos00640] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_2100 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Theos_2099 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Theos_2096 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0270 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Theos_1488 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Theos_1487 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Theos_0269 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Theos_0621 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Theos_1583 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Theos_1159 methylmalonyl-CoA mutase family protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Theos_1158 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_1266 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_0766 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Theos_0765 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Theos_2450 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Theos_1866 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:tos00650] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1281 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Theos_1531 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Theos_1793 enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Theos_1659 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Theos_1658 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Theos_1661 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Theos_1660 succinate dehydrogenase, hydrophobic anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Theos_0621 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Theos_1594 acetyl-CoA hydrolase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-] D Theos_1518 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Theos_0011 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Theos_0010 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Theos_0336 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Theos_2332 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D Theos_1231 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Theos_1230 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tos00660] D Theos_1231 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Theos_1230 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Theos_0766 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Theos_0765 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Theos_2226 Demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Theos_1249 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Theos_1250 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Theos_1251 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tos00562] D Theos_0367 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Theos_2450 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Theos_0953 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tos00190] D Theos_0716 NADH:ubiquinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Theos_0715 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Theos_0714 NADH/F420H2 dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Theos_0713 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Theos_0712 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Theos_0711 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Theos_0710 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Theos_0709 NADH:ubiquinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Theos_0708 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Theos_0707 NADH:ubiquinone oxidoreductase subunit 6 (chain J) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Theos_0706 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Theos_0705 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Theos_0704 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Theos_0703 NADH:ubiquinone oxidoreductase subunit 2 (chain N) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Theos_1376 hypothetical protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Theos_1050 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Theos_1659 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Theos_1658 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Theos_1661 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Theos_1660 succinate dehydrogenase, hydrophobic anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Theos_1042 cytochrome c K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D Theos_0034 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Theos_1499 heme/copper-type cytochrome/quinol oxidase, subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Theos_0036 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D Theos_0035 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Theos_1498 heme/copper-type cytochrome/quinol oxidases, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Theos_0821 archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Theos_0822 archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Theos_0819 archaeal/vacuolar-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Theos_0823 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Theos_0818 archaeal/vacuolar-type H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Theos_0815 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Theos_0816 archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Theos_0817 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Theos_2198 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Theos_2381 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:tos00710] D Theos_1735 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Theos_1734 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Theos_0920 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Theos_0919 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Theos_0264 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1730 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1743 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1644 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1736 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1745 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Theos_0857 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Theos_1732 uridine kinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Theos_0953 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Theos_1731 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Theos_0883 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Theos_0033 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Theos_0160 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:tos00680] D Theos_1375 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D Theos_0332 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Theos_2072 serine-pyruvate aminotransferase/archaeal aspartate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Theos_1806 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Theos_0883 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Theos_0264 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1730 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1743 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Theos_1016 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Theos_1644 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_1736 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_0371 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Theos_1974 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_2314 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_1756 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Theos_0959 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Theos_0136 haloacid dehalogenase superfamily enzyme, subfamily IA K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3] D Theos_1797 phosphosulfolactate phosphohydrolase-like enzyme K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Theos_1744 phosphosulfolactate phosphohydrolase-like enzyme K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Theos_1937 homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Theos_1936 3-isopropylmalate dehydratase, small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] C 00910 Nitrogen metabolism [PATH:tos00910] D Theos_1036 nitrite extrusion protein, nitrite facilitator K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Theos_1037 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Theos_1041 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Theos_1040 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Theos_1038 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Theos_0161 formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Theos_0162 cytochrome c nitrate reductase, small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D Theos_1053 putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D Theos_1052 cytochrome c, mono- and diheme variants family K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D Theos_1056 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Theos_1057 nitric oxide reductase large subunit K02305 norC; nitric oxide reductase subunit C D Theos_1721 2-nitropropane dioxygenase-like enzyme K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Theos_0626 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0627 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_1674 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Theos_1035 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tos00920] D Theos_2440 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Theos_2441 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Theos_2442 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Theos_2304 ATP sulfurylase (sulfate adenylyltransferase) K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Theos_1757 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Theos_2301 thioredoxin-dependent phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Theos_0519 sulfite oxidase-like oxidoreductase K00387 SUOX; sulfite oxidase [EC:1.8.3.1] D Theos_1619 hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Theos_1623 hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Theos_1620 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Theos_1622 cytochrome c2 K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Theos_1625 putative secreted protein K17226 soxY; sulfur-oxidizing protein SoxY D Theos_1624 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D Theos_1621 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D Theos_1615 sulfite oxidase-like oxidoreductase K17225 soxC; sulfane dehydrogenase subunit SoxC D Theos_1614 cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D Theos_2298 sulfite reductase, beta subunit (hemoprotein) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D Theos_2054 NADH dehydrogenase, FAD-containing subunit K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Theos_0751 anaerobic dehydrogenase, typically selenocysteine-containing K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Theos_0907 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_0410 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_2176 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Theos_1075 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Theos_0840 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tos00061] D Theos_0270 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Theos_1488 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Theos_1487 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Theos_0269 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Theos_0670 acyl carrier protein K02078 acpP; acyl carrier protein D Theos_0672 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Theos_0673 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Theos_0669 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Theos_1082 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0671 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_1759 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0183 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Theos_0206 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Theos_1772 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1789 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1668 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1536 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1388 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tos00071] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1531 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Theos_1509 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_2455 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_1176 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_0564 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Theos_1772 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1789 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1668 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1536 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1388 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tos00561] D Theos_1806 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_0837 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Theos_2030 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Theos_0928 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_1222 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0584 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0497 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Theos_1150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Theos_1548 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:tos00564] D Theos_0009 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Theos_0838 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Theos_0928 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_1222 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0584 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0497 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Theos_1150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Theos_2199 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Theos_1332 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:tos00592] D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids D Theos_2024 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tos00230] D Theos_0756 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Theos_0622 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Theos_0211 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Theos_0655 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Theos_0330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Theos_0588 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Theos_0587 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Theos_0329 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Theos_0326 phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Theos_0327 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Theos_1973 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Theos_0734 phosphoribosylaminoimidazole carboxylase, PurK protein K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Theos_0735 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Theos_0325 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Theos_0322 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Theos_0942 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Theos_0359 PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Theos_0360 PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Theos_0516 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Theos_2179 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_2343 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_0788 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Theos_1794 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Theos_1968 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Theos_2111 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Theos_1632 inosine-5''-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Theos_2156 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Theos_0315 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Theos_0652 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Theos_0639 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Theos_0365 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1645 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_2351 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1540 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_2350 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_0668 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D Theos_0054 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Theos_2382 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Theos_2108 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Theos_1716 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Theos_2393 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Theos_0882 hypothetical protein K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60] D Theos_0298 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Theos_0154 ADP-ribose pyrophosphatase K18445 ndx1; diadenosine hexaphosphate hydrolase (ATP-forming) [EC:3.6.1.61] D Theos_2304 ATP sulfurylase (sulfate adenylyltransferase) K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:tos00240] D Theos_1352 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Theos_0125 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Theos_0554 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Theos_0551 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Theos_1517 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D Theos_0549 dihydroorotate dehydrogenase, subfamily 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Theos_0007 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Theos_0006 orotidine 5''-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Theos_1330 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Theos_2156 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Theos_1206 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Theos_1671 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Theos_1762 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Theos_1395 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Theos_0516 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Theos_2179 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_2343 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_0532 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Theos_0555 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Theos_2393 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Theos_1194 putative enzyme involved in pigment biosynthesis K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Theos_0266 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Theos_1415 cytidine deaminase, homotetrameric K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Theos_0236 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Theos_0365 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1645 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_2351 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1540 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_2350 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_1716 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Theos_1680 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Theos_1403 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Theos_0616 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Theos_0882 hypothetical protein K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tos00250] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_1012 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Theos_2072 serine-pyruvate aminotransferase/archaeal aspartate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Theos_2115 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Theos_1593 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Theos_0130 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Theos_0129 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_1383 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_2108 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Theos_0322 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Theos_0554 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Theos_0621 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Theos_1674 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Theos_0626 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0627 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_1562 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_1352 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Theos_0125 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Theos_0327 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Theos_0171 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_1637 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_0330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tos00260] D Theos_0762 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Theos_0771 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Theos_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Theos_1597 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Theos_1818 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Theos_0332 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Theos_2072 serine-pyruvate aminotransferase/archaeal aspartate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Theos_1806 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Theos_1974 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_2314 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Theos_1756 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Theos_0959 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Theos_0136 haloacid dehalogenase superfamily enzyme, subfamily IA K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3] D Theos_1568 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Theos_0796 theronine dehydrogenase-like Zn-dependent dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Theos_0746 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Theos_0747 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Theos_0744 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0745 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Theos_0906 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Theos_1411 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Theos_0618 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Theos_0617 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tos00270] D Theos_2176 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Theos_0412 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Theos_1344 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Theos_0387 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Theos_0601 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Theos_1662 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Theos_0600 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Theos_1968 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Theos_0800 S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Theos_0653 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Theos_0762 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Theos_0771 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Theos_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Theos_1075 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Theos_0840 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Theos_1074 OAH/OAS sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Theos_1523 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Theos_0241 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_0907 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_0410 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_0764 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Theos_0906 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Theos_1411 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Theos_0959 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:tos00280] D Theos_0241 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Theos_2100 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Theos_2099 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Theos_2096 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_1509 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_2455 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_1176 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1583 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Theos_1159 methylmalonyl-CoA mutase family protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Theos_1158 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_1266 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Theos_2094 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Theos_2450 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_0644 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Theos_0776 enoyl-CoA hydratase/carnithine racemase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Theos_0336 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tos00290] D Theos_1249 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Theos_1250 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Theos_1251 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Theos_1231 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Theos_1230 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Theos_1229 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Theos_1255 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Theos_0241 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Theos_1227 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Theos_1228 2-isopropylmalate synthase, bacterial type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tos00300] D Theos_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Theos_0762 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Theos_0771 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Theos_0969 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Theos_0950 aspartate/tyrosine/aromatic aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Theos_2448 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Theos_2432 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Theos_1940 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14] D Theos_1937 homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Theos_1936 3-isopropylmalate dehydratase, small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] D Theos_0440 isocitrate/isopropylmalate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87] D Theos_0667 transcriptional regulator with HTH domain and aminotransferase domain K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Theos_1934 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Theos_1933 Lysine biosynthesis enzyme LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D Theos_1931 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Theos_1932 N-acetyl-gamma-glutamyl-phosphate reductase, common form K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Theos_2048 acetylornithine/succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Theos_2051 N-acetyl-ornithine/N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] D Theos_1717 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Theos_1122 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tos00310] D Theos_0132 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0564 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_0923 ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:tos00220] D Theos_1220 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Theos_0130 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Theos_0129 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_1383 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_0676 arginase K01476 rocF; arginase [EC:3.5.3.1] D Theos_0327 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_1352 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Theos_0125 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Theos_0626 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0627 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_0128 acetyltransferase, N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Theos_1217 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Theos_0016 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Theos_1218 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Theos_1934 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Theos_1931 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Theos_1932 N-acetyl-gamma-glutamyl-phosphate reductase, common form K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Theos_2048 acetylornithine/succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Theos_2051 N-acetyl-ornithine/N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:tos00330] D Theos_0392 arginine decarboxylase, biosynthetic K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Theos_1493 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Theos_0600 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Theos_0601 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Theos_1662 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Theos_0923 ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_0676 arginase K01476 rocF; arginase [EC:3.5.3.1] D Theos_1337 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Theos_1563 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D Theos_1562 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Theos_2037 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Theos_2036 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Theos_0189 putative hydrolase or acyltransferase of alpha/beta superfamily K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_1413 dihydrodipicolinate synthase/N-acetylneuraminate lyase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] C 00340 Histidine metabolism [PATH:tos00340] D Theos_0239 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Theos_0238 ATP phosphoribosyltransferase involved in histidine biosynthesis K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Theos_1643 phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Theos_0731 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Theos_1642 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Theos_0730 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_1961 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Theos_1430 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:tos00350] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0972 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Theos_0973 conserved protein of DIM6/NTAB family K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D Theos_0971 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D Theos_0970 bifunctional isomerase/decarboxylase in 4-hydroxyphenylacetate degradation, C-terminal subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] C 00360 Phenylalanine metabolism [PATH:tos00360] D Theos_0980 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Theos_2457 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Theos_0979 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Theos_0990 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D Theos_0991 putative enzyme of phenylacetate metabolism K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D Theos_0992 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D Theos_0993 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D Theos_0134 enoyl-CoA hydratase/carnithine racemase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Theos_0994 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D Theos_1281 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0110 ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D Theos_2469 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Theos_2473 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:tos00380] D Theos_2470 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Theos_0132 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0564 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tos00400] D Theos_0576 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Theos_1586 phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase domain of gram positive AroA protein K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D Theos_0432 3-dehydroquinate synthetase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Theos_0490 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Theos_2214 4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D Theos_0433 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Theos_1763 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Theos_0434 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Theos_1557 hypothetical protein K01736 aroC; chorismate synthase [EC:4.2.3.5] D Theos_1993 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Theos_1992 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Theos_1991 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Theos_0366 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Theos_1181 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Theos_0618 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Theos_0617 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Theos_1561 monofunctional chorismate mutase, clade 1 K06208 aroH; chorismate mutase [EC:5.4.99.5] D Theos_0575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Theos_0606 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tos00410] D Theos_1356 L-aspartate-alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Theos_0621 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Theos_1372 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Theos_0262 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Theos_2450 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:tos00430] D Theos_1078 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Theos_2115 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Theos_1593 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Theos_1372 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tos00450] D Theos_0840 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Theos_0412 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Theos_1344 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Theos_0086 cysteine desulfurase-like protein, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Theos_0221 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Theos_0422 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Theos_2304 ATP sulfurylase (sulfate adenylyltransferase) K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Theos_0858 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tos00460] D Theos_2285 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_2147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_1078 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Theos_0332 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tos00470] D Theos_2020 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Theos_0658 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Theos_0327 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Theos_0388 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Theos_1125 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Theos_1426 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Theos_2432 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tos00480] D Theos_1078 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Theos_0799 putative lactam utilization protein B-like protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Theos_1908 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Theos_1703 isocitrate dehydrogenase, NADP-dependent, prokaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Theos_0600 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:tos00542] D Theos_0531 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tos00541] D Theos_1381 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Theos_0468 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_1546 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Theos_2105 glucose-1-phosphate thymidylylransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Theos_0500 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Theos_0464 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Theos_1589 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Theos_0530 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:tos00550] D Theos_0225 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Theos_1129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Theos_1128 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Theos_1125 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Theos_1717 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Theos_0658 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Theos_1122 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Theos_2071 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Theos_1124 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Theos_1127 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Theos_1209 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Theos_1121 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:tos00552] D Theos_2071 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Theos_0531 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Theos_0725 exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Theos_1427 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Theos_1548 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tos00543] D Theos_0531 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tos00730] D Theos_2293 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Theos_2290 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Theos_1764 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Theos_0251 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Theos_2294 glycine/D-amino acid oxidase, deaminating K03153 thiO; glycine oxidase [EC:1.4.3.19] D Theos_1998 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Theos_2295 putative enzyme of thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10] D Theos_2297 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Theos_0727 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Theos_2341 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Theos_1629 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Theos_0298 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Theos_2068 hypothetical protein K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-] C 00740 Riboflavin metabolism [PATH:tos00740] D Theos_1164 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Theos_1167 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Theos_1966 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Theos_1165 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Theos_0755 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Theos_0362 Calcineurin-like phosphoesterase K14379 ACP5; tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2] D Theos_0973 conserved protein of DIM6/NTAB family K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D Theos_1919 nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D Theos_0756 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Theos_0622 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Theos_1943 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tos00750] D Theos_1818 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Theos_1462 pyridoxal 5''-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Theos_1445 pyridoxal 5''-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:tos00760] D Theos_1012 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Theos_1011 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Theos_1009 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Theos_1345 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Theos_0788 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Theos_1794 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Theos_0516 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Theos_2179 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_2343 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Theos_0257 nicotinate/nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Theos_1928 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Theos_1595 NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Theos_2127 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Theos_2128 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Theos_2126 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:tos00770] D Theos_1231 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Theos_1230 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Theos_1229 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Theos_1255 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Theos_0663 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Theos_0262 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Theos_0447 pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Theos_0641 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Theos_0941 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Theos_0927 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Theos_0430 phosphopantetheinyl transferase (holo-ACP synthase) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Theos_0241 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Theos_1356 L-aspartate-alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:tos00780] D Theos_0669 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Theos_1082 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0671 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_1759 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0183 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Theos_0206 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Theos_2104 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tos00785] D Theos_2091 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Theos_2092 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_2159 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Theos_0949 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Theos_0948 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Theos_2160 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Theos_0133 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Theos_0132 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Theos_2100 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Theos_2099 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Theos_2096 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Theos_0746 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Theos_0747 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Theos_0744 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Theos_0745 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tos00790] D Theos_0152 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Theos_2341 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Theos_2143 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Theos_2027 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Theos_2142 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Theos_0505 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Theos_2185 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Theos_1164 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Theos_2023 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Theos_1888 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Theos_1900 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Theos_2017 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Theos_1748 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Theos_0539 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tos00670] D Theos_0248 formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Theos_1484 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Theos_0332 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Theos_0587 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Theos_0942 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Theos_0215 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Theos_0744 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Theos_1344 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Theos_0616 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Theos_0523 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Theos_1957 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Theos_0357 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D Theos_2191 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tos00860] D Theos_1782 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Theos_0380 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Theos_0944 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Theos_0346 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Theos_2187 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Theos_0381 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Theos_2299 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Theos_1368 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Theos_1370 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Theos_1369 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Theos_0057 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D Theos_2303 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Theos_2325 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Theos_2300 siroheme synthase, N-terminal domain protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Theos_1051 radical SAM protein, BA_1875 family K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Theos_1995 radical SAM protein, BA_1875 family K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Theos_0034 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Theos_2323 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Theos_2319 precorrin-2 methylase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Theos_2321 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Theos_2320 precorrin-4 methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Theos_2322 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Theos_2316 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Theos_2318 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Theos_2317 precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Theos_2306 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Theos_2041 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Theos_2310 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Theos_2331 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Theos_2326 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Theos_2311 cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Theos_2313 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Theos_1107 Mg-chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D Theos_1013 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tos00130] D Theos_1357 putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Theos_0425 menaquinone biosynthesis decarboxylase, SCO4490 family K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Theos_1943 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Theos_1987 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Theos_1556 o-succinylbenzoic acid synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Theos_1710 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Theos_0579 putative periplasmic solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D Theos_0580 putative menaquinone biosynthesis protein, SCO4494 family K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D Theos_1558 cytosine deaminase-like metal-dependent hydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D Theos_0782 futalosine nucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D Theos_0619 radical SAM domain protein, CofH subfamily K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D Theos_0633 putative periplasmic solute-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tos00900] D Theos_1998 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Theos_1333 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Theos_2070 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Theos_2069 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Theos_1898 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Theos_0205 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Theos_1883 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1943 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Theos_0052 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Theos_1886 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Theos_1941 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Theos_0314 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:tos00906] D Theos_1145 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Theos_0053 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Theos_1149 lycopene cyclase domain protein K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19] D Theos_1148 cytochrome P450 K22492 CYP175A; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:tos00907] D Theos_0336 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Theos_1745 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Theos_2105 glucose-1-phosphate thymidylylransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:tos00946] D Theos_2285 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_2147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Theos_1874 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:tos00332] D Theos_2037 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Theos_2036 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tos00261] D Theos_2304 ATP sulfurylase (sulfate adenylyltransferase) K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Theos_0762 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Theos_0771 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Theos_0969 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tos00521] D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Theos_2164 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Theos_0367 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Theos_2105 glucose-1-phosphate thymidylylransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Theos_0143 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Theos_2105 glucose-1-phosphate thymidylylransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis [PATH:tos00401] D Theos_0575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Theos_1993 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Theos_1992 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Theos_0672 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Theos_1082 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0671 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_1759 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0206 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Theos_0670 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tos00999] D Theos_0387 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Theos_2285 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Theos_2147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tos00362] D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_2469 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Theos_2473 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Theos_2470 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Theos_2472 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Theos_2208 uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Theos_0382 uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Theos_2227 putative LmbE-like protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D Theos_2226 Demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Theos_2222 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D Theos_1531 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Theos_0564 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Theos_1281 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:tos00627] D Theos_0794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Theos_1943 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:tos00625] D Theos_1541 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation [PATH:tos00622] D Theos_2470 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Theos_2472 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Theos_2469 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Theos_2473 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D Theos_1175 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Theos_1530 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:tos00621] D Theos_2472 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Theos_2469 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Theos_2473 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Theos_2474 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tos03020] D Theos_0185 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Theos_0186 DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Theos_0305 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Theos_0640 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tos03010] D Theos_1862 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Theos_1328 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Theos_0283 ribosomal protein S3, bacterial type K02982 RP-S3; small subunit ribosomal protein S3 D Theos_0304 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Theos_0294 ribosomal protein S5, bacterial/organelle type K02988 RP-S5; small subunit ribosomal protein S5 D Theos_2124 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Theos_0273 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7 D Theos_0291 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Theos_1669 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Theos_0276 ribosomal protein S10, bacterial/organelle K02946 RP-S10; small subunit ribosomal protein S10 D Theos_0303 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Theos_0272 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Theos_0302 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Theos_0290 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Theos_1502 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Theos_0900 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Theos_0286 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Theos_2122 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Theos_0281 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Theos_1600 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Theos_1946 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Theos_0280 ribosomal protein L2, bacterial/organellar K02886 RP-L2; large subunit ribosomal protein L2 D Theos_0277 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D Theos_0278 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4 D Theos_0289 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Theos_0292 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Theos_1944 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Theos_2121 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Theos_1945 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Theos_1947 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Theos_1670 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D Theos_0287 ribosomal protein L14, bacterial/organelle K02874 RP-L14; large subunit ribosomal protein L14 D Theos_0296 ribosomal protein L15, bacterial/organelle K02876 RP-L15; large subunit ribosomal protein L15 D Theos_0284 ribosomal protein L16, bacterial/organelle K02878 RP-L16; large subunit ribosomal protein L16 D Theos_0306 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Theos_0293 ribosomal protein L18, bacterial type K02881 RP-L18; large subunit ribosomal protein L18 D Theos_0904 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Theos_0779 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Theos_0254 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Theos_0282 ribosomal protein L22, bacterial type K02890 RP-L22; large subunit ribosomal protein L22 D Theos_0279 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Theos_0288 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24 D Theos_0656 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Theos_0255 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Theos_0198 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Theos_0285 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Theos_0295 ribosomal protein L30, bacterial/organelle K02907 RP-L30; large subunit ribosomal protein L30 D Theos_1404 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Theos_0674 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Theos_1950 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Theos_1774 ribosomal protein L34, bacterial type K02914 RP-L34; large subunit ribosomal protein L34 D Theos_0778 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Theos_0301 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Theos_0231 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_2033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_1891 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Theos_1977 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Theos_1890 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Theos_1976 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tos00970] D Theos_1327 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_0721 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_1303 tRNA-OTHER K14218 tRNA-Ala; tRNA Ala D Theos_0253 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_2040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_2166 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_1116 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_1746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_2125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Theos_0445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Theos_1813 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Theos_0218 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Theos_1202 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Theos_0220 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_0219 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_1889 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1953 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1350 tRNA-His K14226 tRNA-His; tRNA His D Theos_1863 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1698 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1314 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1823 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_2061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1349 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1248 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Theos_1673 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Theos_2022 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_1701 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_1864 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_0444 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Theos_1728 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_1114 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_0938 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_0070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_1474 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_0071 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_1683 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_2090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1952 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1923 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Theos_2486 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Theos_1954 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Theos_1812 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_0040 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_0845 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_1782 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Theos_1400 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Theos_1867 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Theos_1972 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Theos_1554 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Theos_0775 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Theos_0118 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_0420 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_1441 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Theos_1657 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Theos_1444 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Theos_0770 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Theos_2002 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Theos_1555 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Theos_1528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Theos_0858 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Theos_0215 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Theos_1186 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Theos_1861 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Theos_1466 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Theos_1156 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Theos_1713 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Theos_1753 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Theos_1440 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Theos_2192 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Theos_2193 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Theos_1602 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Theos_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tos03060] D Theos_0297 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Theos_1949 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Theos_0252 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Theos_1172 protein-export membrane protein, SecD/SecF family K12257 secDF; SecD/SecF fusion protein D Theos_1777 membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Theos_1271 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Theos_0899 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Theos_0164 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Theos_1784 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Theos_1112 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1588 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1587 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Theos_0452 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Theos_0197 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tos04122] D Theos_1764 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Theos_0907 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_0410 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Theos_1910 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Theos_1888 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Theos_1850 MoaD family protein K03636 moaD; sulfur-carrier protein D Theos_2017 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Theos_0501 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Theos_1900 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Theos_0251 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Theos_2296 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Theos_1829 sulfur transfer protein involved in thiamine biosynthesis K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:tos03018] D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Theos_1503 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Theos_0924 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Theos_1747 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Theos_2277 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Theos_1464 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Theos_0181 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Theos_1504 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_0682 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Theos_0027 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Theos_2381 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Theos_0926 putative domain HDIG-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tos03030] D Theos_1399 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0589 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_2188 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Theos_0014 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_1982 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_0563 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Theos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Theos_0702 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Theos_1279 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_0645 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Theos_2135 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tos03410] D Theos_1750 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Theos_1925 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Theos_2026 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Theos_1959 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Theos_1434 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Theos_1514 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Theos_1470 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_1184 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tos03420] D Theos_1542 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Theos_1640 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Theos_0169 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Theos_1711 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Theos_1787 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tos03430] D Theos_0520 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Theos_0391 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Theos_0521 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D Theos_1787 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Theos_1184 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2188 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Theos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Theos_0014 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_1982 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_0563 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Theos_1399 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0589 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tos03440] D Theos_1184 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_1916 recF protein K03629 recF; DNA replication and repair protein RecF D Theos_0879 recombinational DNA repair protein (RecF pathway) K03584 recO; DNA repair protein RecO (recombination protein O) D Theos_0344 recombination protein RecR K06187 recR; recombination protein RecR D Theos_0180 protein RecA K03553 recA; recombination protein RecA D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_0135 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA D Theos_0662 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Theos_1133 holliday junction resolvasome, endonuclease subunit K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Theos_2013 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Theos_1285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Theos_2188 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Theos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Theos_0014 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_1982 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_0563 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Theos_1399 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0589 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_2021 primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tos02010] D Theos_1847 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D Theos_1848 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D Theos_1849 ABC-type polar amino acid transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Theos_2440 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Theos_2441 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Theos_2442 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Theos_1435 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Theos_1436 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Theos_1437 ABC-type spermidine/putrescine transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Theos_0404 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Theos_2394 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Theos_0403 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Theos_2395 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Theos_0402 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Theos_2396 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Theos_0190 ABC transporter periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Theos_0191 ABC-type Fe3+ transport system, permease component K02063 thiP; thiamine transport system permease protein D Theos_1257 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D Theos_1258 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein D Theos_1259 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D Theos_1260 ABC-type spermidine/putrescine transport system, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Theos_1394 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Theos_0317 maltose-binding periplasmic protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Theos_0318 permease component of ABC-type sugar transporter K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Theos_0319 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Theos_2161 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D Theos_2162 permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D Theos_2163 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein D Theos_0614 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Theos_0854 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Theos_1986 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Theos_0852 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Theos_1985 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Theos_0853 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Theos_0851 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Theos_0613 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Theos_1088 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein D Theos_1089 permease component of ABC-type sugar transporter K17316 gtsB; glucose/mannose transport system permease protein D Theos_1090 ABC-type sugar transport system, permease component K17317 gtsC; glucose/mannose transport system permease protein D Theos_1297 D-xylose ABC transporter, substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Theos_1296 ABC-type xylose transport system, permease component K10544 xylH; D-xylose transport system permease protein D Theos_1295 ABC-type sugar transport system, ATPase component K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Theos_2000 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_0103 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_0104 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2345 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2390 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2347 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Theos_2391 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Theos_2346 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Theos_2392 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Theos_1911 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Theos_1912 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D Theos_1913 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D Theos_1914 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Theos_1769 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2215 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0975 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0514 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2459 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_1384 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2232 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2460 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1771 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2216 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0976 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0513 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1385 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2233 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0977 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2234 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2217 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_0512 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1389 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2461 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1770 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2218 ABC-type sugar transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1773 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0511 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2462 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1387 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0510 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1386 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2235 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2333 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2463 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1768 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_0978 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2358 ABC-type Fe3+-hydroxamate transport system, periplasmic component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D Theos_2379 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Theos_1373 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Theos_1766 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Theos_1767 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Theos_0917 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Theos_2044 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Theos_2043 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Theos_2120 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Theos_0963 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Theos_1795 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Theos_1610 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C D Theos_1611 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B D Theos_1612 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Theos_1578 putative permease K07091 lptF; lipopolysaccharide export system permease protein D Theos_0460 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Theos_1577 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Theos_1781 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Theos_0864 cell division protein K09811 ftsX; cell division transport system permease protein D Theos_0861 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Theos_0503 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Theos_0504 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tos03070] D Theos_2338 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D Theos_1172 protein-export membrane protein, SecD/SecF family K12257 secDF; SecD/SecF fusion protein D Theos_1949 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Theos_0252 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Theos_0297 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Theos_1777 membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Theos_1271 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Theos_1784 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Theos_0899 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Theos_1112 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1588 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1587 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tos02020] D Theos_1725 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Theos_2341 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Theos_1911 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Theos_1714 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0524 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0352 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Theos_2212 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D Theos_2211 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Theos_2210 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Theos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Theos_1755 subtilisin-like serine protease K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] D Theos_0741 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Theos_2043 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Theos_2044 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Theos_0905 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Theos_1041 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Theos_1040 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Theos_1038 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Theos_1039 nitrate reductase delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D Theos_0753 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Theos_0954 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D Theos_0493 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K11618 liaR; two-component system, NarL family, response regulator LiaR D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_1240 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Theos_0634 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1796 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1197 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Theos_0530 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Theos_0676 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tos02024] D Theos_0653 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Theos_1993 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Theos_1992 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Theos_1628 ABC-type spermidine/putrescine transport system, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Theos_1769 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2215 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0975 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0514 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2459 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_1384 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2232 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2460 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1771 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2216 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0976 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0513 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1385 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2233 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0977 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2234 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2217 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_0512 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1389 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2461 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1770 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2218 ABC-type sugar transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1773 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0511 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2462 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1387 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0510 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1386 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2235 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2333 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2463 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1768 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_0978 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1772 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1789 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1668 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1536 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1388 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_0634 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1796 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1167 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Theos_0509 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_0398 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2428 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_1836 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2447 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2429 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_1835 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_2446 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0399 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0508 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0400 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_0507 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_2430 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_1834 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_2445 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_1833 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Theos_1832 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Theos_1777 membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Theos_1172 protein-export membrane protein, SecD/SecF family K12257 secDF; SecD/SecF fusion protein D Theos_1949 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Theos_0252 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Theos_0297 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Theos_1271 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Theos_1784 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Theos_0899 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Theos_1755 subtilisin-like serine protease K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D Theos_0760 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:tos04980] D Theos_2041 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Theos_0229 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D Theos_1344 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tos01501] D Theos_1209 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Theos_1121 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tos01502] D Theos_0658 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Theos_2020 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Theos_1122 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Theos_1124 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Theos_1127 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tos01503] D Theos_0449 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Theos_1714 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0524 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tos01000] C 01001 Protein kinases [BR:tos01001] D Theos_0227 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Theos_0350 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Theos_0423 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Theos_0450 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Theos_0352 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Theos_0374 histidine kinase,HAMP domain-containing protein,histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Theos_2365 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tos01009] D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_0349 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Theos_2157 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:tos01002] D Theos_0197 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Theos_1920 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Theos_1544 pyroglutamyl peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Theos_0652 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Theos_2431 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D Theos_1918 cell wall-associated hydrolase, invasion-associated protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Theos_0330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Theos_1674 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Theos_0171 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_1637 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Theos_0017 putative intracellular protease/amidase K05520 yhbO; deglycase [EC:3.5.1.124] D Theos_0874 putative protease of the Abi (CAAX) family K07052 K07052; CAAX protease family protein D Theos_2047 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Theos_1705 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Theos_1989 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Theos_1908 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Theos_0798 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Theos_0081 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D Theos_2448 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Theos_0299 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Theos_1291 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Theos_1467 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Theos_0396 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Theos_1520 leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-] D Theos_0167 leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-] D Theos_0026 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Theos_0681 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Theos_0659 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Theos_1334 putative membrane-associated Zn-dependent protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Theos_1714 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0524 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0005 subtilisin-like serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D Theos_1000 subtilisin-like serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D Theos_1755 subtilisin-like serine protease K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] D Theos_1347 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Theos_1476 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Theos_0547 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Theos_2279 TIGR02688 family protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Theos_0452 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Theos_0189 putative hydrolase or acyltransferase of alpha/beta superfamily K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Theos_0860 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Theos_1874 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Theos_0679 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Theos_2065 hypothetical protein K13282 cphB; cyanophycinase [EC:3.4.15.6] D Theos_0698 putative membrane protein K07059 K07059; rhomboid family protein D Theos_1108 ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Theos_1078 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Theos_0561 putative Zn-dependent protease-like protein K03592 pmbA; PmbA protein D Theos_0562 putative Zn-dependent protease-like protein K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:tos01003] D Theos_1548 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Theos_1880 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Theos_0725 exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Theos_0531 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Theos_0469 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D Theos_1547 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tos01005] D Theos_0531 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tos01011] D Theos_0225 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Theos_1129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Theos_1128 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Theos_1125 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Theos_1717 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Theos_0658 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Theos_2020 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Theos_0388 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Theos_1124 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Theos_1127 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Theos_2071 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Theos_0808 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Theos_1209 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Theos_1121 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Theos_1918 cell wall-associated hydrolase, invasion-associated protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Theos_0121 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Theos_1469 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Theos_0636 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Theos_0449 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tos01004] D Theos_0672 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Theos_0673 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Theos_0669 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Theos_1082 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0671 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_1759 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Theos_0183 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Theos_0206 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Theos_2024 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D Theos_0954 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D Theos_0809 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1268 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1269 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1270 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Theos_1772 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1789 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1668 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1536 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1388 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_2030 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Theos_0928 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_1222 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0584 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Theos_0497 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Theos_1150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:tos01006] D Theos_1886 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Theos_1941 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Theos_0314 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Theos_1145 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Theos_1401 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Theos_1357 putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Theos_0034 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:tos01007] D Theos_1782 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Theos_0775 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Theos_1602 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Theos_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Theos_1528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Theos_1713 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Theos_0858 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Theos_1466 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Theos_1186 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Theos_1861 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Theos_1156 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Theos_1441 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Theos_1444 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Theos_1657 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Theos_1440 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Theos_0770 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Theos_1555 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Theos_1753 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Theos_2002 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Theos_0118 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_0420 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_2192 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Theos_2193 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Theos_0196 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Theos_0950 aspartate/tyrosine/aromatic aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Theos_2329 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_0729 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Theos_1568 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Theos_0412 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Theos_2048 acetylornithine/succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Theos_0621 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Theos_0923 ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Theos_0944 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Theos_0241 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Theos_2072 serine-pyruvate aminotransferase/archaeal aspartate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] C 00199 Cytochrome P450 [BR:tos00199] D Theos_1148 cytochrome P450 K22492 CYP175A; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tos03000] D Theos_0242 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Theos_2158 transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Theos_2289 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Theos_1360 transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Theos_1799 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Theos_1144 putative cobalamin binding protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Theos_0803 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Theos_2186 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Theos_1907 Fe2+/Zn2+ uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Theos_1800 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Theos_0634 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1796 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Theos_1044 cAMP-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Theos_1143 cAMP-binding protein K22490 ldrP; CRP/FNR family transcriptional regulator, LitR-dependent transcriptional activator D Theos_1765 rrf2 family protein, putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Theos_1092 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Theos_2352 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Theos_1461 putative transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Theos_1079 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Theos_2104 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Theos_0312 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D Theos_0098 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Theos_0013 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Theos_2203 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2413 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2548 putative transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2067 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Theos_0642 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D Theos_2016 transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor D Theos_2001 phenylacetic acid-responsive transcriptional repressor K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D Theos_0555 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Theos_0232 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D Theos_1118 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tos03021] D Theos_0305 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Theos_0185 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Theos_0186 DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Theos_0640 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Theos_0760 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D Theos_2372 DNA-directed RNA polymerase specialized sigma subunit, sigma24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Theos_1169 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Theos_1485 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Theos_1948 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D Theos_1155 transcription elongation factor K03624 greA; transcription elongation factor GreA D Theos_1340 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Theos_1464 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tos03019] D Theos_1504 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D Theos_0181 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Theos_0924 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Theos_1747 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Theos_2277 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Theos_1503 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Theos_1464 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Theos_2195 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Theos_0682 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Theos_0027 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Theos_2381 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Theos_0926 putative domain HDIG-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Theos_0522 RraA family protein K02553 rraA; regulator of ribonuclease activity A D Theos_0192 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ D Theos_1572 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:tos03011] D Theos_1862 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Theos_1328 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Theos_0283 ribosomal protein S3, bacterial type K02982 RP-S3; small subunit ribosomal protein S3 D Theos_0304 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Theos_0294 ribosomal protein S5, bacterial/organelle type K02988 RP-S5; small subunit ribosomal protein S5 D Theos_2124 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Theos_0273 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7 D Theos_0291 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Theos_1669 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Theos_0276 ribosomal protein S10, bacterial/organelle K02946 RP-S10; small subunit ribosomal protein S10 D Theos_0303 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Theos_0272 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Theos_0302 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Theos_0290 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Theos_1502 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Theos_0900 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Theos_0286 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Theos_2122 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Theos_0281 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Theos_1600 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Theos_1599 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31 D Theos_1946 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Theos_0280 ribosomal protein L2, bacterial/organellar K02886 RP-L2; large subunit ribosomal protein L2 D Theos_0277 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D Theos_0278 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4 D Theos_0289 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Theos_0292 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Theos_2121 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Theos_1945 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Theos_1947 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Theos_1944 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Theos_1670 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D Theos_0287 ribosomal protein L14, bacterial/organelle K02874 RP-L14; large subunit ribosomal protein L14 D Theos_0296 ribosomal protein L15, bacterial/organelle K02876 RP-L15; large subunit ribosomal protein L15 D Theos_0284 ribosomal protein L16, bacterial/organelle K02878 RP-L16; large subunit ribosomal protein L16 D Theos_0306 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Theos_0293 ribosomal protein L18, bacterial type K02881 RP-L18; large subunit ribosomal protein L18 D Theos_0904 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Theos_0779 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Theos_0254 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Theos_0282 ribosomal protein L22, bacterial type K02890 RP-L22; large subunit ribosomal protein L22 D Theos_0279 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Theos_0288 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24 D Theos_0255 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Theos_0198 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Theos_0285 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Theos_0295 ribosomal protein L30, bacterial/organelle K02907 RP-L30; large subunit ribosomal protein L30 D Theos_1404 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Theos_0674 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Theos_1950 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Theos_1774 ribosomal protein L34, bacterial type K02914 RP-L34; large subunit ribosomal protein L34 D Theos_0778 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Theos_0301 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Theos_0656 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Theos_1890 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Theos_1976 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Theos_0231 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_2033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_1891 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Theos_1977 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tos03009] D Theos_0245 GTP-binding protein Era K03595 era; GTPase D Theos_0256 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Theos_1169 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Theos_1485 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Theos_1948 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D Theos_0419 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Theos_0717 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Theos_1338 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Theos_0761 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Theos_0940 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Theos_1097 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Theos_2205 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Theos_1119 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Theos_2196 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Theos_0772 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Theos_0140 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Theos_2101 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Theos_0814 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Theos_0680 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Theos_1922 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Theos_0492 SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Theos_2112 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Theos_0664 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Theos_0902 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Theos_1192 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Theos_1098 ribosomal protein L11 methylase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Theos_0120 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Theos_1747 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Theos_0426 ribosome-associated GTPase EngA K03977 engA; GTPase D Theos_0793 GTP-binding protein HflX K03665 hflX; GTPase D Theos_0568 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Theos_0054 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Theos_0921 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Theos_1168 hypothetical protein K09748 rimP; ribosome maturation factor RimP D Theos_0260 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D Theos_1152 metalloprotein, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor D Theos_0862 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Theos_1203 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Theos_0675 putative metal-binding protein, possibly nucleic-acid binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tos03016] D Theos_1473 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Theos_1904 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Theos_2031 hypothetical protein K24956 ZBTB8OS; protein archease D Theos_1782 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Theos_1753 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Theos_1466 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Theos_1861 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Theos_0858 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Theos_0775 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Theos_1713 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Theos_1156 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Theos_1441 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Theos_0118 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_0420 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Theos_1444 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Theos_0770 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Theos_2002 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Theos_1555 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Theos_1528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Theos_1186 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Theos_1440 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Theos_2192 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Theos_2193 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Theos_1602 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Theos_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Theos_0956 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Theos_0363 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Theos_1354 tRNA(1-methyladenosine) methyltransferase-like methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Theos_0413 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Theos_0401 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Theos_2114 tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Theos_1706 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Theos_1764 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Theos_0568 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Theos_1401 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Theos_0943 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Theos_2206 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Theos_1775 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Theos_1117 Bacterial RNase P class A K01978 rnpB; M1 RNA D Theos_1704 exoribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Theos_0179 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Theos_1657 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Theos_1882 tRNA-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Theos_0536 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Theos_0364 radical SAM methylthiotransferase, MiaB/RimO family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Theos_1199 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Theos_1641 tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Theos_0903 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Theos_0240 rRNA methylase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Theos_2012 putative rRNA methylase SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Theos_0029 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D Theos_1910 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Theos_1828 putative ATPase of the PP-loop superfamily implicated in cell cycle control K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Theos_0397 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D Theos_0177 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Theos_0896 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Theos_1820 uncharacterized Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Theos_0202 tRNA-guanine transglycosylase, queuosine-34-forming K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Theos_0251 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Theos_1684 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Theos_1651 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Theos_1272 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Theos_2062 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Theos_0924 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Theos_1503 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tos03012] D Theos_1170 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Theos_0777 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Theos_1329 translation elongation factor Ts K02357 tsf; elongation factor Ts D Theos_1951 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0275 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0369 small GTP-binding protein domain protein K02355 fusA; elongation factor G D Theos_0274 translation elongation factor EF-G K02355 fusA; elongation factor G D Theos_0024 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Theos_1331 ribosome recycling factor K02838 frr; ribosome recycling factor D Theos_1779 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Theos_0657 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Theos_0300 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Theos_1489 translation elongation factor P K02356 efp; elongation factor P D Theos_0223 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:tos03110] D Theos_0686 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Theos_0769 ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Theos_1346 endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Theos_1109 ATP-dependent protease HslVU (ClpYQ), ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Theos_0682 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Theos_0027 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Theos_2073 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D Theos_0684 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D Theos_1527 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33 D Theos_0683 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Theos_0689 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Theos_0692 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Theos_0411 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Theos_1402 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Theos_0028 Co-chaperonin GroES K04078 groES; chaperonin GroES D Theos_1714 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0524 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Theos_0681 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Theos_0659 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Theos_0021 hypothetical protein K09796 pccA; periplasmic copper chaperone A D Theos_0752 putative component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Theos_0005 subtilisin-like serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D Theos_1000 subtilisin-like serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D Theos_2177 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Theos_1367 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Theos_2029 thioredoxin K03671 TXN; thioredoxin D Theos_1606 thiol-disulfide isomerase-like thioredoxin K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D Theos_2063 thiol-disulfide isomerase-like thioredoxin K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tos04131] D Theos_2156 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Theos_0919 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Theos_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:tos04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:tos03032] D Theos_0645 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Theos_1468 PIF1 helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D Theos_0496 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Theos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Theos_0702 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Theos_1279 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2188 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Theos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Theos_0563 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Theos_1399 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0589 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0014 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_1982 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_2135 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Theos_0488 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Theos_1571 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Theos_0416 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tos03036] D Theos_0496 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Theos_0684 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D Theos_0685 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D Theos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Theos_0912 chromosome segregation ATPase K03529 smc; chromosome segregation protein D Theos_1246 hypothetical protein K05896 scpA; segregation and condensation protein A D Theos_0567 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Theos_1131 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Theos_0861 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Theos_1121 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Theos_0602 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Theos_1130 cell division septal protein K03589 ftsQ; cell division protein FtsQ D Theos_1126 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D Theos_0864 cell division protein K09811 ftsX; cell division transport system permease protein D Theos_1132 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Theos_0209 putative ATPase K06916 zapE; cell division protein ZapE D Theos_0449 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Theos_1210 septum formation inhibitor K03610 minC; septum site-determining protein MinC D Theos_1263 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Theos_1262 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Theos_0790 DivIVA domain protein K04074 divIVA; cell division initiation protein D Theos_0182 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Theos_1207 cell shape-determining protein K03570 mreC; rod shape-determining protein MreC D Theos_1208 hypothetical protein K03571 mreD; rod shape-determining protein MreD D Theos_1261 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Theos_2204 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Theos_2412 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Theos_2547 DNA-binding protein, excisionase family K03496 parA; chromosome partitioning protein D Theos_2203 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2413 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2548 putative transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2206 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Theos_2205 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Theos_1641 tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Theos_1017 site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC D Theos_2265 site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC D Theos_2546 site-specific recombinase XerC K04763 xerD; integrase/recombinase XerD D Theos_1100 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:tos03400] D Theos_0637 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Theos_1146 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Theos_1925 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Theos_1750 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Theos_0025 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Theos_0250 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Theos_0230 Zn-finger containing NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Theos_1434 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Theos_1514 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Theos_1959 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Theos_2026 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Theos_1470 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Theos_0498 deoxyinosine 3'endonuclease (endonuclease V) K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Theos_1184 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Theos_0615 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Theos_0888 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Theos_1640 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Theos_0169 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Theos_1711 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Theos_1787 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Theos_0185 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Theos_0186 DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Theos_0305 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Theos_0640 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Theos_1542 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Theos_0520 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Theos_0391 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Theos_0521 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D Theos_2188 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Theos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Theos_0563 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Theos_1399 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0589 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Theos_0014 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_1982 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_0180 protein RecA K03553 recA; recombination protein RecA D Theos_0135 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA D Theos_0662 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Theos_1133 holliday junction resolvasome, endonuclease subunit K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Theos_2021 primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Theos_0806 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D Theos_0805 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D Theos_0768 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Theos_1916 recF protein K03629 recF; DNA replication and repair protein RecF D Theos_2013 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Theos_1285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Theos_0879 recombinational DNA repair protein (RecF pathway) K03584 recO; DNA repair protein RecO (recombination protein O) D Theos_0344 recombination protein RecR K06187 recR; recombination protein RecR D Theos_0335 ATPase involved in DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N) D Theos_0356 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Theos_0936 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D Theos_0488 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Theos_1571 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Theos_0416 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Theos_0496 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Theos_2277 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Theos_0877 hypothetical protein K03565 recX; regulatory protein D Theos_1515 DNA polymerase IV (family X) K02347 polX; DNA polymerase (family X) D Theos_0365 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1645 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_2351 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Theos_1540 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_2350 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Theos_1757 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tos03029] D Theos_1170 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Theos_0777 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Theos_1329 translation elongation factor Ts K02357 tsf; elongation factor Ts D Theos_1951 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0275 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0369 small GTP-binding protein domain protein K02355 fusA; elongation factor G D Theos_0274 translation elongation factor EF-G K02355 fusA; elongation factor G D Theos_0245 GTP-binding protein Era K03595 era; GTPase D Theos_1602 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Theos_1861 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Theos_1441 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Theos_0770 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Theos_1713 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Theos_1400 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Theos_1867 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Theos_1972 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Theos_1554 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Theos_1468 PIF1 helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D Theos_2498 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_2123 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Theos_0787 outer membrane protein/protective antigen OMA87 K07277 SAM50; outer membrane protein insertion porin family D Theos_0682 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Theos_0683 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Theos_0027 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Theos_0028 Co-chaperonin GroES K04078 groES; chaperonin GroES D Theos_2073 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D Theos_1764 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Theos_1100 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D Theos_0034 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Theos_1777 membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Theos_0022 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1 D Theos_1677 membrane protease subunit, stomatin/prohibitin K17080 PHB1; prohibitin 1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tos02000] D Theos_0503 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Theos_0504 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Theos_1435 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Theos_1436 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Theos_1437 ABC-type spermidine/putrescine transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Theos_1847 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D Theos_1848 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D Theos_1849 ABC-type polar amino acid transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Theos_2440 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Theos_2441 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Theos_2442 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Theos_0404 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Theos_2394 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Theos_0403 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Theos_2395 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Theos_0402 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Theos_2396 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Theos_0190 ABC transporter periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Theos_0191 ABC-type Fe3+ transport system, permease component K02063 thiP; thiamine transport system permease protein D Theos_1257 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D Theos_1258 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein D Theos_1259 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D Theos_1260 ABC-type spermidine/putrescine transport system, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Theos_1628 ABC-type spermidine/putrescine transport system, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Theos_1394 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Theos_0317 maltose-binding periplasmic protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Theos_0318 permease component of ABC-type sugar transporter K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Theos_0319 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Theos_1088 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein D Theos_1089 permease component of ABC-type sugar transporter K17316 gtsB; glucose/mannose transport system permease protein D Theos_1090 ABC-type sugar transport system, permease component K17317 gtsC; glucose/mannose transport system permease protein D Theos_2161 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D Theos_2162 permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D Theos_2163 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein D Theos_1297 D-xylose ABC transporter, substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Theos_1296 ABC-type xylose transport system, permease component K10544 xylH; D-xylose transport system permease protein D Theos_1295 ABC-type sugar transport system, ATPase component K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Theos_2000 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_0103 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_0104 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2345 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2390 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Theos_2347 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Theos_2391 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Theos_2346 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Theos_2392 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Theos_0614 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Theos_0854 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Theos_1986 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Theos_0852 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Theos_1985 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Theos_0853 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Theos_0851 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Theos_0613 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Theos_2288 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Theos_1648 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Theos_2464 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Theos_2287 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Theos_2465 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Theos_1650 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Theos_0122 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Theos_2146 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Theos_2286 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Theos_2466 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Theos_1649 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Theos_0159 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Theos_1911 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Theos_1912 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D Theos_1913 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D Theos_1914 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Theos_1769 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2215 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0975 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_0514 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2459 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_1384 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2232 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Theos_2460 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1771 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2216 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0976 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0513 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_1385 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_2233 branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D Theos_0977 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2234 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2217 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_0512 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1389 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2461 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_1770 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D Theos_2218 ABC-type sugar transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1773 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0511 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_2462 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_1387 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D Theos_0510 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1386 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2235 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2333 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_2463 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1768 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_0978 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D Theos_1188 periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Theos_1187 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein D Theos_0842 ABC-type polar amino acid transport system, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Theos_0509 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_0398 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2428 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_1836 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2447 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Theos_2429 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_1835 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_2446 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0399 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0508 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Theos_0400 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_0507 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_2430 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_1834 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_2445 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Theos_1833 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Theos_1832 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Theos_2358 ABC-type Fe3+-hydroxamate transport system, periplasmic component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D Theos_2362 ABC-type hemin transport system, periplasmic component K25132 hmuT; heme transport system substrate-binding protein D Theos_2361 ABC-type Fe3+-siderophore transport system, permease component K25133 hmuU; heme transport system permease protein D Theos_2360 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Theos_2348 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Theos_1429 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Theos_1086 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein D Theos_1085 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein D Theos_1084 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Theos_2379 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Theos_1373 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Theos_1766 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Theos_1767 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Theos_0917 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Theos_1578 putative permease K07091 lptF; lipopolysaccharide export system permease protein D Theos_0460 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Theos_1577 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Theos_1781 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Theos_2044 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Theos_2043 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Theos_2120 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Theos_0963 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Theos_1795 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Theos_1610 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C D Theos_1611 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B D Theos_1612 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Theos_0864 cell division protein K09811 ftsX; cell division transport system permease protein D Theos_0861 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Theos_1223 ABC-type uncharacterized transport system, permease component K25154 evrC; viologen exporter family transport system permease protein D Theos_1225 ABC-type uncharacterized transport system, permease component K25155 evrB; viologen exporter family transport system permease protein D Theos_1224 ABC-type uncharacterized transport system, ATPase component K25156 evrA; viologen exporter family transport system ATP-binding protein D Theos_1894 ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Theos_0166 Protein of unknown function (DUF990) K01992 ABC-2.P; ABC-2 type transport system permease protein D Theos_2173 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Theos_1665 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Theos_1664 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Theos_2172 heme ABC exporter, ATP-binding protein CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Theos_0165 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Theos_1893 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Theos_0101 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Theos_0102 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Theos_0966 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Theos_0113 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Theos_1036 nitrite extrusion protein, nitrite facilitator K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Theos_1037 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Theos_2150 Major Facilitator Superfamily transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D Theos_1633 arabinose efflux permease family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Theos_2167 arabinose efflux permease family protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Theos_1843 cyanate permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Theos_2292 sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Theos_1729 permease, glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator D Theos_2014 ammonium transporter K03320 amt; ammonium transporter, Amt family D Theos_1069 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D Theos_1070 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D Theos_1104 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Theos_1393 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Theos_0056 small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D Theos_0898 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter D Theos_1965 crcB protein K06199 crcB; fluoride exporter D Theos_1416 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Theos_0787 outer membrane protein/protective antigen OMA87 K07277 SAM50; outer membrane protein insertion porin family D Theos_0023 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D Theos_0073 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D Theos_0308 putative permease, DMT superfamily K03298 TC.DME; drug/metabolite transporter, DME family D Theos_0595 putative sodium:solute symporter, VC_2705 subfamily K14393 actP; cation/acetate symporter D Theos_0700 Kef-type K+ transport system, membrane component K26730 napA; Na+:H+ antiporter D Theos_0695 putative regulatory ligand binding protein, C-terminal domain of K+ channels like protein K07228 khtT; K+:H+ antiporter subunit KhtT D Theos_0696 Kef-type K+ transport system, membrane component K26732 khtU; K+:H+ antiporter subunit KhtU D Theos_1190 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D Theos_1191 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D Theos_0201 uracil-xanthine permease K02824 uraA; uracil permease D Theos_1559 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D Theos_2315 high-affinity nickel permease K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Theos_2406 TRAP transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein D Theos_2408 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein D Theos_0939 Na+/phosphate symporter K03324 yjbB; phosphate:Na+ symporter D Theos_0808 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Theos_1095 putative permease K24180 mleP; malate permease and related proteins D Theos_0890 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D Theos_0889 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D Theos_2212 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D Theos_2211 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Theos_2210 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Theos_2110 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D Theos_0643 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein D Theos_1126 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D Theos_1513 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Theos_1613 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D Theos_1041 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Theos_1040 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Theos_1038 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Theos_0751 anaerobic dehydrogenase, typically selenocysteine-containing K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Theos_1045 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D Theos_1046 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D Theos_1607 cytochrome c biogenesis factor K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:tos02044] D Theos_2338 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D Theos_1920 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Theos_1240 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Theos_1970 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Theos_0570 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Theos_0439 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Theos_0438 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Theos_0437 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Theos_0435 type II secretory pathway, component PulD K02666 pilQ; type IV pilus assembly protein PilQ D Theos_1971 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Theos_0263 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Theos_1235 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Theos_1236 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Theos_2201 helix-hairpin-helix protein K02237 comEA; competence protein ComEA D Theos_2202 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Theos_1271 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Theos_1172 protein-export membrane protein, SecD/SecF family K12257 secDF; SecD/SecF fusion protein D Theos_1949 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Theos_0252 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Theos_0297 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Theos_0899 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Theos_1784 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Theos_1777 membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Theos_1112 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1588 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Theos_1587 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tos02042] D Theos_1416 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Theos_0372 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:tos02022] D Theos_1725 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Theos_0352 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Theos_0374 histidine kinase,HAMP domain-containing protein,histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Theos_2365 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Theos_2366 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Theos_0905 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Theos_0753 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Theos_0493 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K11618 liaR; two-component system, NarL family, response regulator LiaR C 02035 Bacterial motility proteins [BR:tos02035] D Theos_1971 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Theos_0263 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Theos_1240 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Theos_1970 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Theos_0570 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Theos_1920 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Theos_0435 type II secretory pathway, component PulD K02666 pilQ; type IV pilus assembly protein PilQ D Theos_0437 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Theos_0438 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Theos_0439 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tos04812] D Theos_0925 putative dioxygenase K06990 MEMO1; MEMO1 family protein D Theos_0065 putative dioxygenase K06990 MEMO1; MEMO1 family protein D Theos_0182 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Theos_1132 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Theos_1131 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Theos_1210 septum formation inhibitor K03610 minC; septum site-determining protein MinC D Theos_1263 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Theos_1262 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Theos_2204 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Theos_2412 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Theos_2547 DNA-binding protein, excisionase family K03496 parA; chromosome partitioning protein D Theos_2203 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2413 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Theos_2548 putative transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tos04147] D Theos_0003 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Theos_0919 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Theos_0920 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Theos_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Theos_0798 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Theos_0910 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Theos_1677 membrane protease subunit, stomatin/prohibitin K17080 PHB1; prohibitin 1 D Theos_0027 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Theos_0682 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Theos_0032 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Theos_1632 inosine-5''-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Theos_1951 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0275 translation elongation factor TU K02358 tuf; elongation factor Tu D Theos_0363 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Theos_1772 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1789 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1668 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1536 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_1388 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Theos_0785 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Theos_0298 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Theos_0359 PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Theos_0360 PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Theos_0129 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_1383 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Theos_0130 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Theos_1374 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Theos_0837 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Theos_0515 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Theos_0346 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Theos_2023 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Theos_2341 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Theos_0959 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Theos_0942 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Theos_2095 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_0131 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Theos_1511 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Theos_0626 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0627 glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Theos_0953 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tos02048] D Theos_0936 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D Theos_0834 CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Theos_0937 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Theos_0930 CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Theos_0825 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Theos_0931 CRISPR type I-E/ECOLI-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA D Theos_0932 CRISPR type I-E/ECOLI-associated protein CasB/Cse2 K19046 casB; CRISPR system Cascade subunit CasB D Theos_0933 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI K19124 casC; CRISPR system Cascade subunit CasC D Theos_0934 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D Theos_0935 CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI K19126 casE; CRISPR system Cascade subunit CasE D Theos_0831 CRISPR type III-A/MTUBE-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2 D Theos_0830 CRISPR type III-A/MTUBE-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3 D Theos_0828 CRISPR type III-A/MTUBE-associated RAMP protein Csm5 K19140 csm5; CRISPR-associated protein Csm5 D Theos_0827 CRISPR-associated protein DxTHG motif-containing protein K19145 csx16; CRISPR-associated protein Csx16 D Theos_1569 type I restriction-modification system methyltransferase subunit K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Theos_0203 adenine-specific DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Theos_0665 DNA modification methylase K24451 zim; modification methylase D Theos_1132 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Theos_0182 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Theos_1782 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Theos_1764 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:tos04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tos04090] C 01504 Antimicrobial resistance genes [BR:tos01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tos00537] D Theos_2341 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Theos_0798 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tos03100] D Theos_1327 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_0721 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_1303 tRNA-OTHER K14218 tRNA-Ala; tRNA Ala D Theos_0253 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Theos_2040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_2166 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_1116 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_1746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Theos_2125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Theos_0445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Theos_1813 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Theos_0218 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Theos_1202 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Theos_0220 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_0219 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Theos_1889 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1953 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Theos_1350 tRNA-His K14226 tRNA-His; tRNA His D Theos_1863 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1698 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1314 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Theos_1823 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_2061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1349 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_1248 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Theos_0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Theos_1673 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Theos_2022 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_1701 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_1864 tRNA-Met K14230 tRNA-Met; tRNA Met D Theos_0444 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Theos_1728 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_1114 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_0938 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Theos_0070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_1474 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_0071 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_1683 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Theos_2090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1952 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Theos_1923 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Theos_2486 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Theos_1954 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Theos_1812 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_0040 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_0845 tRNA-Val K14237 tRNA-Val; tRNA Val D Theos_0231 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_2033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Theos_1891 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Theos_1977 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Theos_1890 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Theos_1976 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Theos_0164 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Theos_1117 Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Theos_0797 glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Theos_1361 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D Theos_1853 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Theos_1093 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Theos_0116 NAD(FAD)-dependent dehydrogenase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D Theos_1232 putative bacillithiol system thiol disulfide oxidoreductase, YpdA family K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D Theos_0243 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Theos_0856 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Theos_0407 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Theos_1452 beta-carotene 15,15''-monooxygenase, Brp/Blh family K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D Theos_1838 thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Theos_1988 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Theos_0066 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Theos_1822 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Theos_1475 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Theos_0631 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Theos_1590 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Theos_0061 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Theos_1814 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D Theos_2117 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Theos_0212 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Theos_1802 esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D Theos_0234 putative phosphatase, C-terminal domain of histone macro H2A1 like protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Theos_2134 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Theos_0981 putative thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Theos_1990 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Theos_0922 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Theos_1969 HAD phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Theos_2386 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Theos_1654 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Theos_0214 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Theos_0916 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Theos_1221 bacillithiol biosynthesis deacetylase BshB1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Theos_1560 putative LmbE-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Theos_2032 putative LmbE-like protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D Theos_0228 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Theos_1760 ADP-ribose pyrophosphatase K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D Theos_0370 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Theos_1067 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Theos_2180 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Theos_1446 UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Theos_1596 yjeF-like protein, hydroxyethylthiazole kinase-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Theos_0249 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D Theos_0087 copper/silver-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Theos_1506 P-type ATPase, translocating K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Theos_1460 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Theos_0072 DNA-binding protein, stimulates sugar fermentation K06206 sfsA; sugar fermentation stimulation protein A D Theos_0605 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D Theos_1831 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D Theos_1830 deacetylase, histone deacetylase/acetoin utilization protein K04768 acuC; acetoin utilization protein AcuC D Theos_0455 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D Theos_0454 (4Fe-4S) cluster-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Theos_0453 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D Theos_0635 bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase C 99982 Energy metabolism D Theos_1111 uncharacterized protein required for formate dehydrogenase activity K02379 fdhD; FdhD protein D Theos_0085 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D Theos_0108 Rieske Fe-S protein K15878 K15878; rieske iron-sulfur protein D Theos_0109 cytochrome b subunit of the bc complex K15879 narC; cytochrome b-561 D Theos_1510 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D Theos_1790 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D Theos_0958 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Theos_1543 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Theos_0789 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D Theos_1533 putative unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Theos_2074 cold shock protein K03704 cspA; cold shock protein D Theos_2178 cold shock protein K03704 cspA; cold shock protein C 99974 Translation D Theos_2028 putative RNA-binding protein with ribosomal protein S1 domain K07571 K07571; S1 RNA binding domain protein D Theos_1956 putative exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Theos_1348 trigger factor K03545 tig; trigger factor D Theos_0915 SsrA-binding protein K03664 smpB; SsrA-binding protein D Theos_2132 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Theos_0448 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein D Theos_1405 membrane-bound serine protease (ClpP class) K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Theos_0424 putative endonuclease related to Holliday junction resolvase K07460 yraN; putative endonuclease D Theos_0244 DNA protecting protein DprA K04096 smf; DNA processing protein D Theos_0157 AAA ATPase K07478 ycaJ; putative ATPase D Theos_2083 hypothetical protein K06919 K06919; putative DNA primase/helicase D Theos_1310 hypothetical protein K06919 K06919; putative DNA primase/helicase D Theos_1312 site-specific recombinase XerD K14059 int; integrase C 99979 Viral proteins C 99998 Others D Theos_1978 phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A D Theos_0869 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E D Theos_0345 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Theos_2439 cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Theos_1421 cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Theos_0075 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D Theos_1778 putative RNA-binding protein K06346 jag; spoIIIJ-associated protein D Theos_0871 hypothetical protein K06415 spoVR; stage V sporulation protein R D Theos_1339 hypothetical protein K06416 spoVS; stage V sporulation protein S C 99993 Cell motility D Theos_1496 putative GTPase K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D Theos_0155 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D Theos_1408 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Theos_0873 putative Ser protein kinase K07180 prkA; serine protein kinase D Theos_0593 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D Theos_0603 outer membrane protein K06142 hlpA; outer membrane protein D Theos_1420 multidrug resistance efflux pump K02005 ABC.CD.TX; HlyD family secretion protein D Theos_1608 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Theos_1605 uncharacterized protein involved in biosynthesis of c-type cytochromes K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Theos_1193 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Theos_0174 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D Theos_0487 uncharacterized protein involved in tolerance to divalent cations K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D Theos_1276 helicase family protein with metal-binding cysteine cluster K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Theos_1634 export-related chaperone CsaA K06878 K06878; tRNA-binding protein D Theos_1178 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Theos_0451 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Theos_0358 haloacid dehalogenase superfamily enzyme, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily D Theos_0328 haloacid dehalogenase superfamily enzyme, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily D Theos_0112 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Theos_0111 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Theos_2034 putative membrane protein K07058 K07058; membrane protein D Theos_1667 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Theos_1073 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE D Theos_0738 putative membrane-associated protein K03975 dedA; membrane-associated protein D Theos_2170 putative membrane protein K08972 K08972; putative membrane protein D Theos_1211 putative membrane protein K08976 K08976; putative membrane protein D Theos_0096 putative membrane protein (DUF2078) K08982 K08982; putative membrane protein C 99997 Function unknown D Theos_1008 thioredoxin domain protein K06888 K06888; uncharacterized protein D Theos_0394 hypothetical protein K06889 K06889; uncharacterized protein D Theos_1492 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein D Theos_1672 putative ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein D Theos_1926 putative CoA-binding protein K06929 K06929; uncharacterized protein D Theos_2423 putative GTPase K06945 K06945; uncharacterized protein D Theos_0901 putative RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein D Theos_0908 putative Zn-dependent protease K06973 K06973; uncharacterized protein D Theos_2510 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain K06992 K06992; uncharacterized protein D Theos_0333 putative nucleic acid-binding protein, contains PIN domain K07063 K07063; uncharacterized protein D Theos_0552 putative nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein D Theos_1636 putative nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein D Theos_1242 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D Theos_1245 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D Theos_1584 putative oxidoreductase K07077 K07077; uncharacterized protein D Theos_0526 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Theos_0528 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Theos_2451 TRAP-type uncharacterized transport system, periplasmic component K07080 K07080; uncharacterized protein D Theos_0844 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Theos_0736 putative permease K07086 K07086; uncharacterized protein D Theos_2302 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Theos_0865 putative permease K07090 K07090; uncharacterized protein D Theos_0557 putative permease K07090 K07090; uncharacterized protein D Theos_0690 putative phosphoesterase, ICC K07096 K07096; uncharacterized protein D Theos_0876 putative phosphohydrolase K07099 K07099; uncharacterized protein D Theos_0763 putative phosphoribosyltransferase K07101 K07101; uncharacterized protein D Theos_1140 YeeE/YedE family protein (DUF395) K07112 K07112; uncharacterized protein D Theos_1752 fused ATPase/acetyltransferase of ABC-type transporter K07128 K07128; uncharacterized protein D Theos_2424 hypothetical protein K07131 K07131; uncharacterized protein D Theos_0341 hypothetical protein K07131 K07131; uncharacterized protein D Theos_2444 putative ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D Theos_1553 uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein D Theos_0408 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein D Theos_1776 hypothetical protein K08998 K08998; uncharacterized protein D Theos_0361 hypothetical protein K08999 K08999; uncharacterized protein D Theos_0881 hypothetical protein K09004 K09004; uncharacterized protein D Theos_1678 hypothetical protein K09005 K09005; uncharacterized protein D Theos_1679 hypothetical protein K09005 K09005; uncharacterized protein D Theos_0623 hypothetical protein K09117 K09117; uncharacterized protein D Theos_0620 hypothetical protein K09129 K09129; uncharacterized protein D Theos_1964 hypothetical protein K09137 K09137; uncharacterized protein D Theos_1792 hypothetical protein K09163 K09163; uncharacterized protein D Theos_1846 hypothetical protein K09763 K09763; uncharacterized protein D Theos_0786 hypothetical protein K09764 K09764; uncharacterized protein D Theos_1483 hypothetical protein K09775 K09775; uncharacterized protein D Theos_0742 hypothetical protein K09785 K09785; uncharacterized protein D Theos_0872 hypothetical protein K09786 K09786; uncharacterized protein D Theos_1054 hypothetical protein K09790 K09790; uncharacterized protein D Theos_1592 hypothetical protein K09793 K09793; uncharacterized protein D Theos_0059 hypothetical protein K09939 K09939; uncharacterized protein D Theos_0429 hypothetical protein K09940 K09940; uncharacterized protein D Theos_0909 hypothetical protein K09981 K09981; uncharacterized protein D Theos_1841 uncharacterized domain/protein associated with RNAses G and E K07586 ygaC; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024