+D
#
Spliceosome - Tympanuchus pallidicinctus (lesser prairie-chicken)
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D 128089741 NCBP1; nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
D 128076042 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
D 128077188 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D 128075787 RBMX; RNA-binding motif protein, X chromosome isoform X1 K12885 RBMX; heterogeneous nuclear ribonucleoprotein G
D 128089799 HNRNPK; heterogeneous nuclear ribonucleoprotein K isoform X1 K12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K
D 128090121 HNRNPM; heterogeneous nuclear ribonucleoprotein M isoform X1 K12887 HNRNPM; heterogeneous nuclear ribonucleoprotein M
D 128075952 HNRNPU; heterogeneous nuclear ribonucleoprotein U K12888 HNRNPU; heterogeneous nuclear ribonucleoprotein U
C SR proteins
D 128083504 SRSF1; serine/arginine-rich splicing factor 1 K12890 SRSF1; serine/arginine-rich splicing factor 1
D 128083163 SRSF2; serine/arginine-rich splicing factor 2 K12891 SRSF2_8; serine/arginine-rich splicing factor 2/8
D 128088101 SRSF3; serine/arginine-rich splicing factor 3 K12892 SRSF3; serine/arginine-rich splicing factor 3
D 128086853 serine/arginine-rich splicing factor 5-like isoform X1 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 128080907 SRSF6; serine/arginine-rich splicing factor 6 isoform X1 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 128088244 SRSF4; serine/arginine-rich splicing factor 4 isoform X1 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 128085793 SRSF5; serine/arginine-rich splicing factor 5 isoform X1 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 128075654 serine/arginine-rich splicing factor 7-like isoform X1 K12896 SRSF7; serine/arginine-rich splicing factor 7
D 128078942 SRSF7; serine/arginine-rich splicing factor 7 isoform X1 K12896 SRSF7; serine/arginine-rich splicing factor 7
D 128088305 SRSF10; serine/arginine-rich splicing factor 10 isoform X1 K12900 SRSF10; serine/arginine-rich splicing factor 10
D 128081768 TRA2B; transformer-2 protein homolog beta isoform X1 K12897 TRA2; transformer-2 protein
D 128085828 TRA2A; transformer-2 protein homolog alpha isoform X1 K12897 TRA2; transformer-2 protein
C General mRNP proteins
D 128079403 BCLAF1; bcl-2-associated transcription factor 1 isoform X1 K13087 BCLAF1; bcl2 associated transcription factor 1
D 128090102 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
D 128090581 ILF2; interleukin enhancer-binding factor 2 isoform X1 K13089 ILF2; interleukin enhancer-binding factor 2
D 128081119 RBM39; RNA-binding protein 39 isoform X1 K13091 RBM23_39; RNA-binding protein 23/39
D 128084934 YBX1; Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
D 128082260 ZC3H18; zinc finger CCCH domain-containing protein 18 isoform X1 K13092 ZC3H18; nuclear protein NHN1
#
AComplex A
B U1 snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D 128088121 SNRPC; U1 small nuclear ribonucleoprotein C K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D 128082963 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 128076875 PRPF40A; pre-mRNA-processing factor 40 homolog A isoform X1 K12821 PRPF40; pre-mRNA-processing factor 40
D 128086665 RBM25; RNA-binding protein 25 isoform X1 K12822 RBM25; RNA-binding protein 25
D 128083810 TCERG1; LOW QUALITY PROTEIN: transcription elongation regulator 1 K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D 128075302 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 128078571 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 128083999 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1
D 128090452 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 128088232 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 128076970 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 128081717 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 128075706 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 128082521 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 128083636 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 128088721 DDX42; ATP-dependent RNA helicase DDX42 isoform X1 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 128073104 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D 128076503 U2AF1; splicing factor U2AF 35 kDa subunit isoform X1 K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D 128088905 CHERP; calcium homeostasis endoplasmic reticulum protein isoform X1 K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D 128080337 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 128084096 DDX46; probable ATP-dependent RNA helicase DDX46 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D 128071936 PUF60; poly(U)-binding-splicing factor PUF60 isoform X1 K12838 PUF60; poly(U)-binding-splicing factor PUF60
D 128079618 RBM17; splicing factor 45 isoform X1 K12840 RBM17; splicing factor 45
D 128077521 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 128082552 U2SURP; U2 snRNP-associated SURP motif-containing protein isoform X1 K12842 SR140; U2-associated protein SR140
D 128085401 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
D 128076554 ZRSR2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B Other components
C Complex A specific factors
D 128077645 BUB3; mitotic checkpoint protein BUB3 isoform X1 K02180 BUB3; cell cycle arrest protein BUB3
D 128085019 cyclin-dependent kinase 11B isoform X1 K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D 128075970 HTATSF1; HIV Tat-specific factor 1 K13093 HTATSF1; HIV Tat-specific factor 1
D 128078401 RBM5; RNA-binding protein 5 K13094 RBM5_10; RNA-binding protein 5/10
D 128088992 SUGP1; SURP and G-patch domain-containing protein 1 K13096 SF4; splicing factor 4
D 128078097 TET1; methylcytosine dioxygenase TET1 isoform X1 K13097 TET1; methylcytosine dioxygenase [EC:1.14.11.80]
D 128077473 RBM20; RNA-binding protein 20 K24052 RBM20; RNA-binding protein 20
#
AComplex B
B U1 snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D 128088121 SNRPC; U1 small nuclear ribonucleoprotein C K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D 128082963 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 128076875 PRPF40A; pre-mRNA-processing factor 40 homolog A isoform X1 K12821 PRPF40; pre-mRNA-processing factor 40
D 128086665 RBM25; RNA-binding protein 25 isoform X1 K12822 RBM25; RNA-binding protein 25
D 128083810 TCERG1; LOW QUALITY PROTEIN: transcription elongation regulator 1 K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D 128075302 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 128078571 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 128083999 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1
D 128090452 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 128088232 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 128076970 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 128081717 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 128075706 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 128082521 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 128083636 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 128088721 DDX42; ATP-dependent RNA helicase DDX42 isoform X1 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 128073104 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D 128076503 U2AF1; splicing factor U2AF 35 kDa subunit isoform X1 K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D 128088905 CHERP; calcium homeostasis endoplasmic reticulum protein isoform X1 K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D 128080337 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 128084096 DDX46; probable ATP-dependent RNA helicase DDX46 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D 128071936 PUF60; poly(U)-binding-splicing factor PUF60 isoform X1 K12838 PUF60; poly(U)-binding-splicing factor PUF60
D 128079618 RBM17; splicing factor 45 isoform X1 K12840 RBM17; splicing factor 45
D 128077521 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 128082552 U2SURP; U2 snRNP-associated SURP motif-containing protein isoform X1 K12842 SR140; U2-associated protein SR140
D 128085401 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
D 128076554 ZRSR2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B U4/U6.U5 tri-snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D 128078578 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D 128088990 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D 128085404 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D 128084323 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D 128090129 LSM7; U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D 128073964 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D 128092053 PRPF3; U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D 128079755 PRPF4; U4/U6 small nuclear ribonucleoprotein Prp4 K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D 128084935 PPIH; peptidyl-prolyl cis-trans isomerase H isoform X1 K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D 128073000 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 128084780 SART3; squamous cell carcinoma antigen recognized by T-cells 3 K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D 128088806 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D 128080837 PRPF6; pre-mRNA-processing factor 6 K12855 PRPF6; pre-mRNA-processing factor 6
D 128083451 PRPF8; pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D 128088481 SNRNP40; U5 small nuclear ribonucleoprotein 40 kDa protein K12857 SNRNP40; Prp8 binding protein
D 128071854 SNRNP200; U5 small nuclear ribonucleoprotein 200 kDa helicase K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D 128087900 TXNL4A; thioredoxin-like protein 4A K12859 TXNL4A; U5 snRNP protein, DIM1 family
C U4/U6.U5 tri-snRNP specific factors
D 128090205 SNRNP27; U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D 128081375 ZMAT2; zinc finger matrin-type protein 2 K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D 128072257 PRPF38A; pre-mRNA-splicing factor 38A K12849 PRPF38A; pre-mRNA-splicing factor 38A
D 128072274 PRPF38B; pre-mRNA-splicing factor 38B K12850 PRPF38B; pre-mRNA-splicing factor 38B
D 128076950 CWC22; pre-mRNA-splicing factor CWC22 homolog K13100 CWC22; pre-mRNA-splicing factor CWC22
D 128083633 HSPB1; heat shock protein beta-1 K04455 HSPB1; heat shock protein beta-1
D 128084804 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 128074600 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 128091442 ZNF830; zinc finger protein 830 K13104 ZNF830; zinc finger protein 830
D 128085401 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
B Other components
C Prp19 complex
D 128085668 PRPF19; pre-mRNA-processing factor 19 isoform X1 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 128084798 CDC5L; cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 128088060 BCAS2; pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 128084373 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1
D 128074955 CWC15; spliceosome-associated protein CWC15 homolog K12863 CWC15; protein CWC15
D 128081212 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1
D 128087642 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 128074002 WBP11; WW domain-binding protein 11 K12866 WBP11; WW domain-binding protein 11
C Prp19-related factors
D 128086686 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1
D 128088257 SYF2; pre-mRNA-splicing factor SYF2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D 128089627 CRNKL1; crooked neck-like protein 1 K12869 CRN; crooked neck
D 128085901 AQR; RNA helicase aquarius K12874 AQR; intron-binding protein aquarius
D 128078846 BUD31; protein BUD31 homolog K12873 BUD31; bud site selection protein 31
D 128085289 CCDC12; coiled-coil domain-containing protein 12 K12871 CCDC12; coiled-coil domain-containing protein 12
D 128078369 ISY1; pre-mRNA-splicing factor ISY1 homolog K12870 ISY1; pre-mRNA-splicing factor ISY1
D 128088339 PPIE; peptidyl-prolyl cis-trans isomerase E isoform X1 K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D 128090249 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 isoform X1 K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D 128090574 PRCC; proline-rich protein PRCC K13105 PRCC; proline-rich protein PRCC
D 128081313 RBM22; pre-mRNA-splicing factor RBM22 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D 128092070 KHDC4; KH homology domain-containing protein 4 isoform X1 K25780 KHDC4; kelch domain-containing protein 4
C RES complex
D 128087648 BUD13; BUD13 homolog isoform X1 K13106 BUD13; pre-mRNA-splicing factor CWC26
D 128075901 RBMX2; RNA-binding motif protein, X-linked 2 K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 128088353 SNIP1; smad nuclear-interacting protein 1 K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D 128081359 IK; protein Red K13109 IK; IK cytokine
D 128075218 MFAP1; microfibrillar-associated protein 1 K13110 MFAP1; microfibrillar-associated protein 1
D 128089747 SMU1; WD40 repeat-containing protein SMU1 K13111 SMU1; WD40 repeat-containing protein SMU1
D 128088345 THRAP3; thyroid hormone receptor-associated protein 3 isoform X1 K13112 THRAP3; thyroid hormone receptor-associated protein 3
#
AComplex C
B U2 snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D 128078578 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D 128075302 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 128078571 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 128083999 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1
D 128090452 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 128088232 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 128076970 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 128081717 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 128075706 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 128082521 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 128083636 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 128088721 DDX42; ATP-dependent RNA helicase DDX42 isoform X1 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 128073104 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
B U4/U6.U5 tri-snRNP components
C Sm proteins
D 128080897 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 128086052 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 128084162 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 128088103 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 128073066 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 128090195 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D 128088806 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D 128071854 SNRNP200; U5 small nuclear ribonucleoprotein 200 kDa helicase K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D 128080837 PRPF6; pre-mRNA-processing factor 6 K12855 PRPF6; pre-mRNA-processing factor 6
D 128083451 PRPF8; pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D 128088481 SNRNP40; U5 small nuclear ribonucleoprotein 40 kDa protein K12857 SNRNP40; Prp8 binding protein
C U4/U6.U5 tri-SnRNP specific factors
C U4/U6.U5 tri-SnRNP related factors
D 128081375 ZMAT2; zinc finger matrin-type protein 2 K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D 128072257 PRPF38A; pre-mRNA-splicing factor 38A K12849 PRPF38A; pre-mRNA-splicing factor 38A
D 128072274 PRPF38B; pre-mRNA-splicing factor 38B K12850 PRPF38B; pre-mRNA-splicing factor 38B
D 128076950 CWC22; pre-mRNA-splicing factor CWC22 homolog K13100 CWC22; pre-mRNA-splicing factor CWC22
D 128083633 HSPB1; heat shock protein beta-1 K04455 HSPB1; heat shock protein beta-1
D 128084804 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 128074600 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 128091442 ZNF830; zinc finger protein 830 K13104 ZNF830; zinc finger protein 830
D 128080337 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 128084670 TFIP11; tuftelin-interacting protein 11 K13103 TFIP11; tuftelin-interacting protein 11
D 128085401 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
B Other components
C Prp19-CDC5 complex
D 128085668 PRPF19; pre-mRNA-processing factor 19 isoform X1 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 128084798 CDC5L; cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 128088060 BCAS2; pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 128081212 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1
D 128074955 CWC15; spliceosome-associated protein CWC15 homolog K12863 CWC15; protein CWC15
D 128084373 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1
D 128087642 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D 128086686 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1
D 128088257 SYF2; pre-mRNA-splicing factor SYF2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D 128089627 CRNKL1; crooked neck-like protein 1 K12869 CRN; crooked neck
D 128085901 AQR; RNA helicase aquarius K12874 AQR; intron-binding protein aquarius
D 128078846 BUD31; protein BUD31 homolog K12873 BUD31; bud site selection protein 31
D 128085289 CCDC12; coiled-coil domain-containing protein 12 K12871 CCDC12; coiled-coil domain-containing protein 12
D 128078369 ISY1; pre-mRNA-splicing factor ISY1 homolog K12870 ISY1; pre-mRNA-splicing factor ISY1
D 128090249 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 isoform X1 K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D 128088339 PPIE; peptidyl-prolyl cis-trans isomerase E isoform X1 K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D 128081313 RBM22; pre-mRNA-splicing factor RBM22 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D 128087648 BUD13; BUD13 homolog isoform X1 K13106 BUD13; pre-mRNA-splicing factor CWC26
D 128075901 RBMX2; RNA-binding motif protein, X-linked 2 K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 128088353 SNIP1; smad nuclear-interacting protein 1 K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D 128077283 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D 128078426 CCDC174; coiled-coil domain-containing protein 174 isoform X1 K25178 CCDC174; coiled-coil domain-containing protein 174
D 128072224 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
D 128086263 PNN; pinin K13114 PNN; pinin
D 128090795 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
D 128076242 THOC2; THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2
D 128081513 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D 128082913 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
C Step II factors
D 128081954 CDC40; pre-mRNA-processing factor 17 K12816 CDC40; pre-mRNA-processing factor 17
D 128079738 PRPF18; pre-mRNA-splicing factor 18 isoform X1 K12817 PRPF18; pre-mRNA-splicing factor 18
D 128081609 SLU7; pre-mRNA-splicing factor SLU7 isoform X1 K12819 SLU7; pre-mRNA-processing factor SLU7
D 128091755 DHX8; ATP-dependent RNA helicase DHX8 isoform X1 K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D 128082654 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
D 128082187 RSRC1; serine/Arginine-related protein 53 K24594 RSRC1; arginine/serine-rich coiled-coil protein 1
C PPlases
D 128079998 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D 128076796 PPIG; peptidyl-prolyl cis-trans isomerase G K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D 128074516 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D 128074522 CWC27; spliceosome-associated protein CWC27 homolog K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
D 128081469 HNRNPH1; heterogeneous nuclear ribonucleoprotein H isoform X1 K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D 128078117 HNRNPH3; heterogeneous nuclear ribonucleoprotein H3 isoform X1 K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D 128088528 HNRNPR; heterogeneous nuclear ribonucleoprotein R isoform X1 K13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R
D 128081158 RALY; RNA-binding protein Raly K12895 RALY; RNA-binding protein Raly
C Complex C specific factors
D 128081628 DDX41; probable ATP-dependent RNA helicase DDX41 isoform X1 K13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
D 128081005 DHX35; probable ATP-dependent RNA helicase DHX35 isoform X1 K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D 128084055 ESS2; splicing factor ESS-2 homolog K13118 DGCR14; protein DGCR14
D 128088908 FAM32A; protein FAM32A K13120 FAM32A; protein FAM32A
D 128078084 protein FRA10AC1 isoform X1 K13121 FRA10AC1; protein FRA10AC1
D 128080164 FRG1; protein FRG1 K13122 FRG1; protein FRG1
D 128082013 GPATCH1; G patch domain-containing protein 1 isoform X1 K13123 GPATCH1; G patch domain-containing protein 1
D 128081073 PABPC1L; polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
D 128088332 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
D 128091519 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
D 128088736 RNF113A; E3 ubiquitin-protein ligase RNF113A isoform X1 K13127 RNF113A; RING finger protein 113A
D 128084670 TFIP11; tuftelin-interacting protein 11 K13103 TFIP11; tuftelin-interacting protein 11
D 128084751 ZCCHC8; zinc finger CCHC domain-containing protein 8 isoform X1 K13128 ZCCHC8; zinc finger CCHC domain-containing protein 8
D 128090135 CACTIN; splicing factor Cactin K25058 CACTIN; cactin
D 128075629 SDE2; splicing regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 128083522 PRKRIP1; PRKR-interacting protein 1 K26159 PRKRIP1; PRKR-interacting protein 1
#
AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D 128089573 SMN1; survival motor neuron protein K13129 SMN; survival motor neuron protein
D 128086274 GEMIN2; gem-associated protein 2 K13130 GEMIN2; gem associated protein 2
D 128088009 DDX20; probable ATP-dependent RNA helicase DDX20 K13131 DDX20; ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
D 128083424 GEMIN4; gem-associated protein 4 K13132 GEMIN4; gem associated protein 4
D 128081419 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
D 128075676 GEMIN6; gem-associated protein 6 K13134 GEMIN6; gem associated protein 6
D 128090674 GEMIN8; gem-associated protein 8 K13136 GEMIN8; gem associated protein 8
D 128073935 STRAP; serine-threonine kinase receptor-associated protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
D 128079291 INTS1; integrator complex subunit 1 isoform X1 K13138 INTS1; integrator complex subunit 1
D 128083435 INTS2; integrator complex subunit 2 K13139 INTS2; integrator complex subunit 2
D 128078797 INTS3; integrator complex subunit 3 isoform X1 K13140 INTS3; integrator complex subunit 3
D 128074016 INTS4; integrator complex subunit 4 isoform X1 K13141 INTS4; integrator complex subunit 4
D 128074757 INTS6; integrator complex subunit 6 isoform X1 K13143 INTS6; integrator complex subunit 6
D 128082133 INTS7; integrator complex subunit 7 K13144 INTS7; integrator complex subunit 7
D 128090740 INTS8; integrator complex subunit 8 isoform X1 K13145 INTS8; integrator complex subunit 8
D 128085142 INTS9; integrator complex subunit 9 isoform X1 K13146 INTS9; integrator complex subunit 9
D 128085074 INTS11; integrator complex subunit 11 K13148 CPSF3L; integrator complex subunit 11 [EC:3.1.27.-]
D 128080575 INTS12; integrator complex subunit 12 K13149 INTS12; integrator complex subunit 12
C Other proteins involved in snRNP biogenesis
D 128083289 COIL; coilin K13150 COIL; coilin
D 128077521 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 128075424 SNUPN; snurportin-1 K13151 SNUPN; snurportin-1
D 128082375 USB1; U6 snRNA phosphodiesterase 1 isoform X1 K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D 128074478 CLNS1A; methylosome subunit pICln K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D 128090694 TGS1; trimethylguanosine synthase isoform X1 K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D 128076032 integrator complex subunit 6-like isoform X1 K13180 INTS6L; integrator complex subunit 6-like
D 128087653 ZPR1; zinc finger protein ZPR1 K06874 ZPR1; zinc finger protein ZPR1
B Minor spliceosome components
C Minor spliceosome specific factors
D 128084020 ZMAT5; zinc finger matrin-type protein 5 isoform X1 K13152 ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein
D 128079343 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1 K13153 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein
D 128073790 ZCRB1; zinc finger CCHC-type and RNA-binding motif-containing protein 1 K13154 ZCRB1; U11/U12 small nuclear ribonucleoprotein 31 kDa protein
D 128084809 SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 K13155 SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein
D 128091013 SNRNP48; U11/U12 small nuclear ribonucleoprotein 48 kDa protein K13156 SNRNP48; U11/U12 small nuclear ribonucleoprotein 48 kDa protein
D 128072128 RNPC3; RNA-binding region-containing protein 3 K13157 RNPC3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein
C Minor spliceosome associated proteins
D 128085254 RBM48; RNA-binding protein 48 isoform X1 K24824 RBM48; RNA-binding protein 48
D 128083028 ARMC7; armadillo repeat-containing protein 7 K24825 ARMC7; armadillo repeat-containing protein 7
D 128081833 CRIPT; cysteine-rich PDZ-binding protein K24826 CRIPT; cysteine-rich PDZ-binding protein
D 128071920 SCNM1; sodium channel modifier 1 K24827 SCNM1; sodium channel modifier 1
D 128084804 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 128087623 CENATAC; centrosomal AT-AC splicing factor K26160 CENATAC; centrosomal AT-AC splicing factor
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
D 128083837 HNRNPA0; heterogeneous nuclear ribonucleoprotein A0 K12894 HNRNPA0; heterogeneous nuclear ribonucleoprotein A0
D 128085751 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
D 128080528 HNRNPD; heterogeneous nuclear ribonucleoprotein D0 isoform X1 K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 128080531 HNRNPDL; heterogeneous nuclear ribonucleoprotein D-like K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 128084125 HNRNPAB; heterogeneous nuclear ribonucleoprotein A/B isoform X1 K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 128089852 HNRNPLL; heterogeneous nuclear ribonucleoprotein L-like isoform X1 K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D 128073153 HNRNPL; heterogeneous nuclear ribonucleoprotein L isoform X1 K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D 128090065 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q isoform X1 K13160 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q
D 128089024 MSL1; male-specific lethal 1 homolog isoform X1 K13163 MSL1; male-specific lethal 1
D 128082772 MSL2; E3 ubiquitin-protein ligase MSL2 isoform X1 K13164 MSL2; male-specific lethal 2
C SR proteins
D 128072757 SRSF11; serine/arginine-rich splicing factor 11 isoform X1 K12899 SRSF11; serine/arginine-rich splicing factor 11
D 128074428 SREK1; splicing regulatory glutamine/lysine-rich protein 1 isoform X1 K13165 SREK1; splicing regulatory glutamine/lysine-rich protein 1
D 128088891 SUGP2; SURP and G-patch domain-containing protein 2 isoform X1 K13166 SUGP2; SURP and G-patch domain-containing protein 2
D 128076424 SCAF4; SR-related and CTD-associated factor 4 isoform X1 K13167 SCAF4; SR-related and CTD-associated factor 4
D 128071712 AKAP17A; A-kinase anchor protein 17A isoform X1 K13169 AKAP17; A-kinase anchor protein 17
D 128081960 PNISR; arginine/serine-rich protein PNISR K13170 PNISR; arginine/serine-rich protein PNISR
C SR-related proteins
D 128088242 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D 128071588 ARGLU1; arginine and glutamate-rich protein 1 K13173 ARGLU1; arginine and glutamate-rich protein 1
D 128076343 SON; protein SON isoform X1 K23718 SON; protein SON
D 128089562 PSIP1; PC4 and SFRS1-interacting protein K25057 PSIP1; PC4 and SFRS1-interacting protein
D 128091735 ILDR1; immunoglobulin-like domain-containing receptor 1 K25781 ILDR1; immunoglobulin-like domain-containing receptor 1
D 128090696 ILDR2; immunoglobulin-like domain-containing receptor 2 isoform X1 K25782 ILDR2; immunoglobulin-like domain-containing receptor 2
D 128072764 ZRANB2; zinc finger Ran-binding domain-containing protein 2 isoform X1 K26076 ZRANB2; zinc finger Ran-binding domain-containing protein 2
C TREX complex
D 128090795 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
D 128076242 THOC2; THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2
D 128081513 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D 128082913 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
D 128083804 THOC5; THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
D 128078302 THOC7; THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
C RNA helicase-like proteins
D 128092099 DDX1; ATP-dependent RNA helicase DDX1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 128076379 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D 128073186 DDX17; probable ATP-dependent RNA helicase DDX17 K13178 DDX17; ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
D 128077065 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 128080895 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 128078636 DDX43; probable ATP-dependent RNA helicase DDX43 isoform X1 K17043 DDX43; ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
D 128086406 DHX30; ATP-dependent RNA helicase DHX30 isoform X1 K13185 DHX30; ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
D 128077829 DHX32; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 K18994 DHX32; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:5.6.2.6]
D 128089482 YTHDC2; 3'-5' RNA helicase YTHDC2 isoform X1 K20099 YTHDC2; ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
D 128071988 DQX1; ATP-dependent RNA helicase DQX1 isoform X1 K14433 DQX1; ATP-dependent helicase [EC:5.6.2.-]
C RNA binding proteins (RBPs)
D 128087607 RBM7; RNA-binding protein 7 K13188 RBM7; RNA-binding protein 7
D 128072865 RBM11; splicing regulator RBM11 isoform X1 K25005 RBM11; splicing regulator RBM11
D 128080799 RBM12; RNA-binding protein 12 K24526 RBM12; RNA-binding protein 12
D 128090771 RBM12B; RNA-binding protein 12B K24526 RBM12; RNA-binding protein 12
D 128088177 RBM15; RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
D 128078383 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
D 128082594 SCAF8; SR-related and CTD-associated factor 8 isoform X1 K13191 RBM16; RNA-binding protein 16
D 128073467 RBM18; probable RNA-binding protein 18 K24527 RBM18; RNA-binding protein 18
D 128081001 RBM38; RNA-binding protein 38 K25006 RBM24_38; RNA-binding protein 24/38
D 128087856 RBM24; RNA-binding protein 24 isoform X1 K25006 RBM24_38; RNA-binding protein 24/38
D 128092218 RBM26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
D 128083983 RBM27; RNA-binding protein 27 isoform X1 K13193 RBM27; RNA-binding protein 27
D 128075560 RBPMS2; RNA-binding protein with multiple splicing 2 K25091 RBPMS; RNA-binding protein with multiple splicing
D 128076609 ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 K12968 ADAR; double-stranded RNA-specific adenosine deaminase [EC:3.5.4.37]
D 128086982 ADARB2; double-stranded RNA-specific editase B2 isoform X1 K13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]
D 128076636 ADARB1; double-stranded RNA-specific editase 1 isoform X1 K13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]
D 128085759 CBX3; chromobox protein homolog 3 isoform X1 K11586 CBX3; chromobox protein 3
D 128088946 CIRBP; cold-inducible RNA-binding protein isoform X1 K13195 CIRBP; cold-inducible RNA-binding protein
D 128091920 YBX3; Y-box-binding protein 3 K06099 CSDA; cold shock domain protein A
D 128091783 IGF2BP1; insulin-like growth factor 2 mRNA-binding protein 1 K17391 IGF2BP1; insulin-like growth factor 2 mRNA-binding protein 1
D 128085824 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
D 128088399 KHDRBS1; KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X1 K13198 KHDRBS1; KH domain-containing, RNA-binding, signal transduction-associated protein 1
D 128080571 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2 isoform X1 K17843 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2
D 128090864 KHDRBS3; KH domain-containing, RNA-binding, signal transduction-associated protein 3 isoform X1 K14942 KHDRBS3; KH domain-containing, RNA-binding, signal transduction-associated protein 3
D 128081776 MBNL1; muscleblind-like protein 1 isoform X1 K14943 MBNL; muscleblind
D 128075785 MBNL3; muscleblind-like protein 3 isoform X1 K14943 MBNL; muscleblind
D 128071561 MBNL2; muscleblind-like protein 2 isoform X1 K14943 MBNL; muscleblind
D 128087072 NOVA1; RNA-binding protein Nova-1 isoform X1 K14944 NOVA; RNA-binding protein Nova
D 128088312 QKI; KH domain-containing RNA-binding protein QKI isoform X1 K14945 QKI; protein quaking
D 128073385 RBFOX2; RNA binding protein fox-1 homolog 2 isoform X1 K14946 RBFOX; RNA binding protein fox-1
D 128082903 RBFOX3; LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 3 K14946 RBFOX; RNA binding protein fox-1
D 128078883 RBFOX1; RNA binding protein fox-1 homolog 1 isoform X1 K14946 RBFOX; RNA binding protein fox-1
D 128072755 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein isoform X1 K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D 128073341 STRBP; spermatid perinuclear RNA-binding protein isoform X1 K13200 STRBP; spermatid perinuclear RNA-binding protein
D 128090185 TIA1; cytotoxic granule associated RNA binding protein TIA1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
D 128077482 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
D 128072375 TOE1; target of EGR1 protein 1 K13202 TOE1; target of EGR1 protein 1
D 128074582 ZFR; zinc finger RNA-binding protein isoform X1 K13203 ZFR; zinc finger RNA-binding protein
D 128072623 ZNF326; DBIRD complex subunit ZNF326 isoform X1 K13204 ZNF326; zinc finger protein 326
D 128080614 YTHDC1; YTH domain-containing protein 1 isoform X1 K20100 YTHDC1; YTH domain-containing protein 1
D 128075832 NKAP; NF-kappa-B-activating protein K25931 NKAP; NF-kappa-B-activating protein
C Other SAPs
D 128080906 AAR2; protein AAR2 homolog K13205 AAR2; A1 cistron-splicing factor AAR2
D 128083398 NSRP1; nuclear speckle splicing regulatory protein 1 K13206 CCDC55; coiled-coil domain-containing protein 55
D 128077296 dual specificity protein kinase CLK1 isoform X1 K23561 CLK1_4; dual specificity protein kinase CLK1/4 [EC:2.7.12.1]
D 128084121 CLK4; dual specificity protein kinase CLK4 K23561 CLK1_4; dual specificity protein kinase CLK1/4 [EC:2.7.12.1]
D 128075209 CLK3; dual specificity protein kinase CLK3 K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D 128092073 CLK2; dual specificity protein kinase CLK2 isoform X1 K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D 128086933 CELF1; CUGBP Elav-like family member 1 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128074631 CELF4; CUGBP Elav-like family member 4 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128075357 CELF6; CUGBP Elav-like family member 6 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128090364 CELF5; CUGBP Elav-like family member 5 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128071900 CELF3; CUGBP Elav-like family member 3 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128079730 CELF2; CUGBP Elav-like family member 2 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 128072735 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 K09526 DNAJC6; DnaJ homolog subfamily C member 6
D 128088553 DNAJC8; dnaJ homolog subfamily C member 8 K09528 DNAJC8; DnaJ homolog subfamily C member 8
D 128086028 DNAJC13; dnaJ homolog subfamily C member 13 isoform X1 K09533 DNAJC13; DnaJ homolog subfamily C member 13
D 128089443 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D 128072314 ELAVL4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D 128081940 ESRP2; epithelial splicing regulatory protein 2 isoform X1 K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D 128091279 ESRP1; epithelial splicing regulatory protein 1 isoform X1 K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D 128083981 EWSR1; RNA-binding protein EWS isoform X1 K13209 EWSR1; RNA-binding protein EWS
D 128073332 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
D 128072680 FUBP1; far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
D 128076385 PAXBP1; PAX3- and PAX7-binding protein 1 isoform X1 K13211 GCFC; GC-rich sequence DNA-binding factor
D 128073449 LUC7L2; putative RNA-binding protein Luc7-like 2 isoform X1 K13212 LUC7L2; RNA-binding protein Luc7-like 2
D 128081539 MATR3; matrin-3 isoform X1 K13213 MATR3; matrin 3
D 128076212 NONO; non-POU domain-containing octamer-binding protein isoform X1 K13214 NONO; non-POU domain-containing octamer-binding protein
D 128074939 PSPC1; paraspeckle component 1 K24993 PSPC1; paraspeckle component 1
D 128088278 SFPQ; splicing factor, proline- and glutamine-rich K13219 SFPQ; splicing factor, proline- and glutamine-rich
D 128086790 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 128076356 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 128084646 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 128088546 PPP1R8; nuclear inhibitor of protein phosphatase 1 K13216 PPP1R8; nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-]
D 128087717 PRPF4B; serine/threonine-protein kinase PRP4 homolog K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D 128087200 PRPF39; pre-mRNA-processing factor 39 K13217 PRPF39; pre-mRNA-processing factor 39
D 128090344 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
D 128072552 PTBP2; polypyrimidine tract-binding protein 2 isoform X1 K14948 PTBP2; polypyrimidine tract-binding protein 2
D 128089416 PTBP3; polypyrimidine tract-binding protein 3 isoform X1 K17844 PTBP3; polypyrimidine tract-binding protein 3
D 128090269 SRPK1; SRSF protein kinase 1 isoform X1 K15409 SRPK1; serine/threonine-protein kinase SRPK1 [EC:2.7.11.1]
D 128079559 SRPK2; SRSF protein kinase 2 isoform X1 K08831 SRPK2; serine/threonine-protein kinase SRPK2 [EC:2.7.11.1]
D 128072995 XRCC6; X-ray repair cross-complementing protein 6 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
D 128092106 WBP4; WW domain-binding protein 4 isoform X1 K13220 WBP4; WW domain-binding protein 4
D 128088017 WDR77; methylosome protein 50 K13221 WDR77; methylosome protein 50
D 128082184 CCNL1; cyclin-L1 K23966 CCNL; cyclin L
D 128085100 CCNL2; cyclin-L2 isoform X1 K23966 CCNL; cyclin L
D 128082773 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D 128078054 CWF19L1; CWF19-like protein 1 K24939 CWF19L1; CWF19-like protein 1
D 128074910 CWF19L2; CWF19-like protein 2 K24940 CWF19L2; CWF19-like protein 2
D 128090413 scaffold attachment factor B1-like isoform X1 K25092 SAFB; scaffold attachment factor B
D 128090415 scaffold attachment factor B1-like K25092 SAFB; scaffold attachment factor B
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ASplicing related RNAs
B 128090177 U1 spliceosomal RNA K14276 U1snRNA; U1 spliceosomal RNA
B 128091973 U2 spliceosomal RNA K14277 U2snRNA; U2 spliceosomal RNA
B 128084176 U4 spliceosomal RNA K14278 U4snRNA; U4 spliceosomal RNA
B 128076580 U5 spliceosomal RNA K14279 U5snRNA; U5 spliceosomal RNA
B 128072050 U6 spliceosomal RNA K14280 U6snRNA; U6 spliceosomal RNA
B 128089823 U6 spliceosomal RNA K14280 U6snRNA; U6 spliceosomal RNA
B 128074125 U6atac minor spliceosomal RNA K26387 RNU6ATAC; U6atac small nuclear RNA
B 128083756 Z30 small nucleolar RNA K27200 SNORD7; small nucleolar RNA SNORD7
B 128088575 small Cajal body-specific RNA 1 K27152 SCARNA1; small Cajal body-specific RNA 1
B 128090335 small Cajal body-specific RNA 2 K27161 SCARNA2; small Cajal body-specific RNA 2
B 128092080 small Cajal body-specific RNA 4 K27153 SCARNA4; small Cajal body-specific RNA 4
B 128082855 small Cajal body-specific RNA 6 K27154 SCARNA6; small Cajal body-specific RNA 6
B 128082854 small Cajal body-specific RNA 6 K27154 SCARNA6; small Cajal body-specific RNA 6
B 128082861 small Cajal body-specific RNA 7 K27166 SCARNA7; small Cajal body-specific RNA 7
B 128089824 small Cajal body-specific RNA 8 K27167 SCARNA8; small Cajal body-specific RNA 8
B 128089945 small nucleolar RNA U85 K27155 SCARNA10; small Cajal body-specific RNA 10
B 128089943 small Cajal body-specific RNA 11 K27156 SCARNA11; small Cajal body-specific RNA 11
B 128087432 small Cajal body-specific RNA 13 K27169 SCARNA13; small Cajal body-specific RNA 13
B 128075680 small Cajal body-specific RNA 14 K27170 SCARNA14; small Cajal body-specific RNA 14
B 128075679 small Cajal body-specific RNA 15 K27158 SCARNA15; small Cajal body-specific RNA 15
B 128083310 small Cajal body-specific RNA 16 K27159 SCARNA16; small Cajal body-specific RNA 16
B 128076247 small nucleolar RNA U109 K27172 SCARNA18; small Cajal body-specific RNA 18
B 128076583 small Cajal body-specific RNA 24 K27160 SCARNA24; small Cajal body-specific RNA 24
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 3, 2024