+D GENES KO
#
KEGG Orthology (KO) - Thermus parvatiensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tpar00010]
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AV541_00330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_01885 kbaY; tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AV541_05775 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D AV541_05980 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AV541_06200 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AV541_06195 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AV541_00825 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_10565 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_09505 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AV541_00900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AV541_10010 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_01005 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AV541_01000 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AV541_05200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tpar00020]
D AV541_04035 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AV541_07070 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AV541_03080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AV541_00400 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AV541_00395 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_01005 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AV541_01000 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AV541_08000 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AV541_03525 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AV541_03510 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AV541_03515 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AV541_07900 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AV541_10010 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tpar00030]
D AV541_00330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AV541_09365 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AV541_09370 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AV541_05435 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AV541_04820 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AV541_00605 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_02570 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AV541_03025 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AV541_09860 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D AV541_01885 kbaY; tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AV541_05775 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:tpar00040]
D AV541_09365 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AV541_06390 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:tpar00051]
D AV541_05710 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AV541_09865 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AV541_02010 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_01885 kbaY; tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AV541_05775 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D AV541_05980 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:tpar00052]
D AV541_07700 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AV541_07400 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:tpar00500]
D AV541_10735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AV541_08915 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AV541_04905 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AV541_04410 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D AV541_08320 trehalose phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D AV541_08315 alpha,alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AV541_00330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AV541_05710 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AV541_09865 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tpar00520]
D AV541_10665 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AV541_05710 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AV541_09865 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AV541_01310 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AV541_03595 sugar aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AV541_05485 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AV541_08760 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AV541_09800 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AV541_05330 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AV541_04165 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_07700 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AV541_07400 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AV541_00330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AV541_02010 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AV541_08915 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tpar00620]
D AV541_01005 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AV541_01000 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AV541_10010 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AV541_01915 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AV541_05150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AV541_01910 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AV541_07855 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AV541_05200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AV541_06530 Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AV541_02640 hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AV541_07900 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AV541_07520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AV541_08175 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AV541_04680 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AV541_04685 transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tpar00630]
D AV541_01540 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D AV541_08175 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AV541_04035 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AV541_07070 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AV541_08730 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D AV541_05560 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D AV541_04495 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_05555 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_08190 2-hydroxy-acid oxidase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_08070 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AV541_08065 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_08075 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AV541_04120 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tpar00640]
D AV541_00040 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_01915 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AV541_05150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AV541_01910 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AV541_06405 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AV541_08730 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D AV541_05560 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D AV541_04495 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_05555 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_08000 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AV541_04035 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AV541_05200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AV541_01735 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:tpar00650]
D AV541_04405 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AV541_06285 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AV541_03620 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D AV541_03525 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AV541_03510 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AV541_03515 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AV541_06405 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AV541_05695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AV541_03555 4-hydroxybutyrate CoA-transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D AV541_01005 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AV541_01000 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AV541_04665 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AV541_04670 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tpar00660]
D AV541_04665 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AV541_04670 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AV541_08000 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AV541_04575 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
C 00562 Inositol phosphate metabolism [PATH:tpar00562]
D AV541_09190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AV541_05980 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tpar00190]
D AV541_09235 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AV541_09240 NADH-quinone oxidoreductase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AV541_09245 NADH-quinone oxidoreductase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D AV541_09255 NADH-quinone oxidoreductase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AV541_09260 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AV541_09270 NADH-quinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AV541_09275 (4Fe-4S)-binding protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AV541_09280 NADH-quinone oxidoreductase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AV541_09285 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AV541_09300 oxidoreductase K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AV541_10920 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AV541_03525 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AV541_03510 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AV541_03515 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AV541_00500 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AV541_05080 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AV541_05085 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AV541_00505 cytochrome B K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AV541_04360 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D AV541_04365 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D AV541_04350 ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D AV541_04370 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D AV541_04345 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D AV541_04355 ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D AV541_04335 ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D AV541_04340 ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D AV541_00960 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tpar00710]
D AV541_06195 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AV541_06200 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AV541_01885 kbaY; tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AV541_09370 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AV541_05980 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AV541_09365 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AV541_05435 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AV541_07520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:tpar00720]
D AV541_07520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AV541_07900 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AV541_03525 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AV541_03510 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AV541_03515 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AV541_08000 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AV541_01005 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AV541_01000 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AV541_03080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AV541_07070 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AV541_01915 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AV541_05150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AV541_01910 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AV541_08730 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D AV541_04495 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_05555 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_05560 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D AV541_05165 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:tpar00680]
D AV541_07520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AV541_01885 kbaY; tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AV541_05775 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_00825 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_10565 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_09505 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AV541_00415 hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D AV541_03600 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D AV541_01240 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D AV541_01245 homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:tpar00910]
D AV541_10955 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AV541_09335 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AV541_02885 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_03425 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:tpar00920]
D AV541_06875 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AV541_06870 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AV541_09510 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AV541_07310 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AV541_07295 ferredoxin--nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D AV541_02645 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_05610 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_00720 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AV541_06925 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tpar00061]
D AV541_01915 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AV541_05150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AV541_01910 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AV541_08630 acyl carrier protein K02078 acpP; acyl carrier protein
D AV541_07230 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AV541_08615 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AV541_06970 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08625 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08410 diguanylate cyclase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_01645 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AV541_03640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tpar00071]
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AV541_06285 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AV541_05045 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AV541_03640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D AV541_03790 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AV541_08630 acyl carrier protein K02078 acpP; acyl carrier protein
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tpar00561]
D AV541_10280 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AV541_02030 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AV541_06155 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_06690 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_04005 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AV541_05530 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AV541_06315 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:tpar00564]
D AV541_02065 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AV541_06155 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_06690 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_04005 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AV541_05530 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AV541_00955 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AV541_10275 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AV541_06435 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AV541_04870 fructosamine kinase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:tpar00592]
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tpar00230]
D AV541_06400 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AV541_08055 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AV541_00605 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_02570 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AV541_03025 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AV541_06670 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AV541_03165 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D AV541_03160 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AV541_00820 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AV541_08130 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AV541_03170 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AV541_06135 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AV541_02700 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AV541_02705 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AV541_04100 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AV541_00790 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AV541_07880 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AV541_03615 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AV541_00795 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AV541_10195 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AV541_10030 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AV541_02495 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AV541_03000 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AV541_02950 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AV541_08640 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AV541_02170 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AV541_10205 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AV541_02410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:tpar00240]
D AV541_06835 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AV541_06845 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AV541_06855 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AV541_02055 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AV541_02050 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AV541_06425 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AV541_10030 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AV541_04810 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AV541_03460 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AV541_08425 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AV541_04100 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AV541_00790 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AV541_04175 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AV541_06830 transcriptional regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AV541_04880 pseudouridine-5-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D AV541_07025 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D AV541_09740 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AV541_02735 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AV541_05280 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tpar00250]
D AV541_05760 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AV541_03560 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AV541_10175 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AV541_00370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AV541_10205 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AV541_06835 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AV541_06405 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AV541_05695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AV541_03425 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AV541_02885 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_03160 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AV541_01310 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AV541_03595 sugar aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:tpar00260]
D AV541_08020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AV541_07965 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AV541_03760 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AV541_00825 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_10565 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AV541_09505 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AV541_00415 hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D AV541_02850 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AV541_07845 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D AV541_08070 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AV541_08065 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_08075 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AV541_07005 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AV541_05290 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AV541_05285 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tpar00270]
D AV541_00720 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AV541_02660 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AV541_07555 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AV541_02545 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AV541_06605 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AV541_03505 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AV541_00795 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AV541_05405 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D AV541_08020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AV541_07965 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AV541_03760 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AV541_06925 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AV541_04985 cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AV541_09710 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AV541_02645 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_05610 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_05200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AV541_07005 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:tpar00280]
D AV541_09710 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AV541_00040 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_05045 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AV541_08730 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D AV541_05560 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D AV541_04495 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_05555 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D AV541_00095 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tpar00290]
D AV541_04575 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AV541_04665 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AV541_04670 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AV541_04675 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AV541_09710 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AV541_04680 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AV541_04685 transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tpar00300]
D AV541_08020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AV541_07965 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AV541_05925 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AV541_01240 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D AV541_01245 homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D AV541_03840 isocitrate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87]
D AV541_08645 2-aminoadipate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AV541_01255 sulfonate ABC transporter substrate-binding protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D AV541_01270 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D AV541_01265 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D AV541_09315 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
C 00310 Lysine degradation [PATH:tpar00310]
D AV541_00395 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_05695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:tpar00220]
D AV541_04750 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AV541_00370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AV541_03275 arginase K01476 rocF; arginase [EC:3.5.3.1]
D AV541_03160 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_02885 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AV541_00365 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AV541_04765 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AV541_01030 acetylaminoadipate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AV541_04760 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AV541_01255 sulfonate ABC transporter substrate-binding protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D AV541_01270 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D AV541_01265 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
C 00330 Arginine and proline metabolism [PATH:tpar00330]
D AV541_02555 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D AV541_05110 agmatinase K27683 apauh; N1-aminopropylagmatine ureohydrolase [EC:3.5.3.24]
D AV541_06605 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AV541_03505 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AV541_03275 arginase K01476 rocF; arginase [EC:3.5.3.1]
D AV541_02875 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D AV541_01135 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AV541_01130 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AV541_01675 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:tpar00340]
D AV541_09730 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AV541_03570 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D AV541_08555 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AV541_03575 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AV541_08560 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_00640 histidinol phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
C 00350 Tyrosine metabolism [PATH:tpar00350]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_05910 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D AV541_05905 MFS transporter K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D AV541_05915 2-hydroxymuconic semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D AV541_05920 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D AV541_05695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:tpar00360]
D AV541_05865 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D AV541_05870 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D AV541_05805 paaA; AAA family ATPase K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D AV541_05810 phenylacetic acid degradation protein K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D AV541_05820 phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D AV541_00405 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D AV541_04405 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_01515 diguanylate cyclase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism
D AV541_00395 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tpar00400]
D AV541_06730 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AV541_08745 chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D AV541_03800 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AV541_03975 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AV541_03805 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AV541_08430 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AV541_03810 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AV541_06360 acetyltransferase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AV541_01505 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AV541_01510 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AV541_04945 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AV541_05290 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AV541_05285 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AV541_06375 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D AV541_06735 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AV541_05240 bifunctional chorismate mutase/prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tpar00410]
D AV541_07625 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AV541_06405 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AV541_01875 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D AV541_03560 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AV541_10175 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tpar00450]
D AV541_02660 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AV541_07555 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AV541_02090 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AV541_08830 pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AV541_04245 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tpar00460]
D AV541_10735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00470 D-Amino acid metabolism [PATH:tpar00470]
D AV541_03160 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AV541_02540 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AV541_05350 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AV541_01600 chloromuconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
C 00480 Glutathione metabolism [PATH:tpar00480]
D AV541_05835 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AV541_00220 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AV541_03080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tpar00542]
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tpar00541]
D AV541_07400 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AV541_02010 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AV541_08760 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AV541_04165 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:tpar00550]
D AV541_09800 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AV541_05330 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AV541_05350 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AV541_09315 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AV541_09955 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AV541_05355 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
C 00552 Teichoic acid biosynthesis [PATH:tpar00552]
D AV541_09955 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AV541_06315 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:tpar00572]
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AV541_07405 dTDP-rhamnosyl transferase rfbF K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 00543 Exopolysaccharide biosynthesis [PATH:tpar00543]
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AV541_01995 glycosyl transferase K20999 pslF; polysaccharide biosynthesis protein PslF
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tpar00730]
D AV541_07255 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AV541_08435 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AV541_07270 oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D AV541_07285 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AV541_10660 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AV541_03665 ABC transporter substrate-binding protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D AV541_02410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AV541_09940 hypothetical protein K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:tpar00740]
D AV541_05455 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AV541_05445 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AV541_00665 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AV541_05450 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AV541_05905 MFS transporter K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D AV541_10625 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D AV541_06400 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AV541_08055 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AV541_01210 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism
D AV541_07180 pyridoxal biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D AV541_07165 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tpar00760]
D AV541_05760 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AV541_05755 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AV541_07880 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AV541_03615 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AV541_04100 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AV541_00790 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AV541_01850 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AV541_10125 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AV541_10130 pyridine nucleotide transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AV541_10135 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AV541_05695 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:tpar00770]
D AV541_04665 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AV541_04670 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AV541_04675 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AV541_08665 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AV541_01875 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AV541_03870 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D AV541_02960 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AV541_06140 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AV541_06160 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AV541_03790 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AV541_09710 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AV541_07625 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tpar00780]
D AV541_06970 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08625 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08410 diguanylate cyclase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_01645 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AV541_07620 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
C 00785 Lipoic acid metabolism [PATH:tpar00785]
D AV541_00110 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_10010 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AV541_00400 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AV541_00395 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AV541_00040 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AV541_08070 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AV541_08065 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AV541_08075 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tpar00790]
D AV541_01395 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AV541_10660 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AV541_10040 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AV541_02015 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AV541_10045 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AV541_04050 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AV541_05455 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AV541_01705 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AV541_08855 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AV541_01770 cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AV541_09100 molybdenum cofactor biosynthesis protein D/E K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D AV541_04210 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tpar00670]
D AV541_05165 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AV541_06135 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AV541_00585 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AV541_07555 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AV541_05280 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D AV541_04120 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AV541_02715 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tpar00860]
D AV541_03215 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AV541_06120 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AV541_02780 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AV541_07300 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AV541_03210 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AV541_07670 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AV541_07675 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AV541_02185 heme-binding protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D AV541_07320 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AV541_10620 SAM-dependent methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AV541_07305 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D AV541_00500 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AV541_10590 precorrin-2 methylase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D AV541_10600 hypothetical protein K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D AV541_10605 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D AV541_10575 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D AV541_10585 precorrin-6Y-methylase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D AV541_10580 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D AV541_01155 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AV541_10540 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AV541_10630 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AV541_07460 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D AV541_03345 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tpar00130]
D AV541_07630 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AV541_08815 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D AV541_01210 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AV541_01470 dimethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AV541_06355 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AV541_03040 competence protein ComA K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AV541_06710 aminofutalosine synthase MqnE K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D AV541_07910 futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D AV541_02920 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tpar00900]
D AV541_06440 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AV541_09950 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AV541_09945 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AV541_01760 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AV541_00480 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AV541_08880 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AV541_01210 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AV541_01220 UDP pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D AV541_02490 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tpar00906]
D AV541_10695 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D AV541_10755 phytoene synthase K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:tpar00907]
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AV541_09370 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tpar00946]
D AV541_10735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D AV541_08925 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:tpar00332]
D AV541_01135 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AV541_01130 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tpar00261]
D AV541_08020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AV541_07965 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AV541_05925 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tpar00521]
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AV541_00755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AV541_09190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AV541_00450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:tpar00401]
D AV541_06735 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AV541_01505 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AV541_06970 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08625 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08410 diguanylate cyclase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AV541_08630 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tpar00999]
D AV541_02545 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AV541_10735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tpar00362]
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AV541_06725 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AV541_03205 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D AV541_06285 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AV541_04405 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation [PATH:tpar00627]
D AV541_07855 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AV541_01210 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
D AV541_06725 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:tpar00622]
D AV541_06725 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D AV541_06280 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
D AV541_06725 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tpar03020]
D AV541_01660 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AV541_02445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AV541_02955 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tpar03010]
D AV541_09900 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AV541_06415 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AV541_02335 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AV541_02440 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AV541_02390 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AV541_00140 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AV541_02285 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AV541_02375 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AV541_03470 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AV541_02300 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AV541_02435 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AV541_02280 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AV541_02430 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AV541_02370 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AV541_05065 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AV541_05575 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AV541_02350 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AV541_00130 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AV541_02325 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AV541_03745 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AV541_00150 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AV541_02320 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AV541_02305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AV541_02310 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AV541_02365 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AV541_02380 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AV541_10145 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AV541_00125 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AV541_10140 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AV541_00155 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AV541_03465 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AV541_02355 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AV541_02400 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AV541_02340 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AV541_02450 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AV541_02385 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AV541_05595 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AV541_07925 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AV541_01835 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AV541_02330 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AV541_02315 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AV541_02360 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AV541_02815 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AV541_01840 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AV541_09025 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AV541_02345 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AV541_02395 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AV541_05400 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AV541_08610 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AV541_00170 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AV541_08475 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AV541_07930 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AV541_02425 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AV541_02045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_09770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_08840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AV541_00840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AV541_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AV541_08845 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tpar00970]
D AV541_06410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_09210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_01830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_09375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_00745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_07510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_01150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_00145 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AV541_03860 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AV541_08225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AV541_01185 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AV541_04840 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AV541_01190 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_01195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_00545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_00185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_07505 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_08850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_00830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_07585 tRNA-His K14226 tRNA-His; tRNA His
D AV541_09680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AV541_04585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_09905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_08290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_07580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_07075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_00540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AV541_03450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AV541_03070 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_08405 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_01710 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_03855 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AV541_07500 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_06150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_09355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_02225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_02230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_03060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_06575 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_01820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_00195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_00180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_01305 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AV541_00190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AV541_08220 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_00550 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_05615 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_01720 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AV541_00815 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AV541_06345 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AV541_07945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AV541_01565 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_09830 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_07145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AV541_03535 aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D AV541_07160 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AV541_07975 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AV541_01410 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AV541_06350 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AV541_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AV541_04245 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AV541_00585 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AV541_04920 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AV541_05430 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AV541_05545 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AV541_09305 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AV541_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tpar03060]
D AV541_02405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AV541_00165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AV541_01825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AV541_07220 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D AV541_05570 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AV541_01345 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D AV541_08525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AV541_07490 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D AV541_08750 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AV541_03900 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AV541_09030 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tpar04122]
D AV541_08435 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AV541_02645 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_05610 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AV541_00230 tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AV541_08855 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AV541_09855 molybdopterin converting factor K03636 moaD; sulfur-carrier protein
D AV541_09100 molybdenum cofactor biosynthesis protein D/E K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D AV541_04030 adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AV541_01770 cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AV541_07280 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AV541_08335 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tpar03018]
D AV541_05060 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AV541_06175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AV541_09450 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AV541_05440 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AV541_01635 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AV541_05055 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_00295 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AV541_06165 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tpar03030]
D AV541_01440 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AV541_00910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AV541_04415 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_02980 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tpar03410]
D AV541_09465 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AV541_01690 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AV541_00630 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AV541_05020 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AV541_07115 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AV541_06545 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tpar03420]
D AV541_01320 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AV541_03655 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tpar03430]
D AV541_04110 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AV541_03655 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_00910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AV541_01440 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tpar03440]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_02770 recombination protein RecR K06187 recR; recombination protein RecR
D AV541_01630 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D AV541_00410 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AV541_08670 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AV541_05310 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AV541_09080 ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AV541_00910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AV541_01440 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tpar02010]
D AV541_06875 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AV541_06870 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AV541_07120 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AV541_07125 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D AV541_07130 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AV541_02615 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AV541_02610 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AV541_01680 ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AV541_04540 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AV541_04535 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D AV541_04530 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D AV541_04525 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AV541_02505 sugar ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D AV541_02510 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D AV541_02515 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D AV541_00770 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AV541_00765 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AV541_00760 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AV541_05270 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D AV541_04230 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AV541_04225 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AV541_04215 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AV541_01095 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AV541_00235 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D AV541_00240 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D AV541_00245 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D AV541_00250 phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AV541_07745 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_04090 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_05890 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_07750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_04085 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_05885 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_05880 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_07760 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04075 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AV541_07695 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AV541_08445 manganese transporter K09816 znuB; zinc transport system permease protein
D AV541_08450 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AV541_01170 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D AV541_01165 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D AV541_03700 cytochrome C assembly protein K02195 ccmC; heme exporter protein C
D AV541_03690 ABC transporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AV541_08700 permease K11720 lptG; lipopolysaccharide export system permease protein
D AV541_08510 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AV541_05420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AV541_04045 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:tpar03070]
D AV541_05660 transporter K12340 tolC; outer membrane protein
D AV541_07220 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D AV541_00165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AV541_01825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AV541_02405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AV541_08525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AV541_05570 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AV541_07490 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D AV541_08750 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tpar02020]
D AV541_10660 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AV541_00235 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D AV541_04125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_09310 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_00915 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AV541_01165 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D AV541_01170 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D AV541_05600 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D AV541_10955 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AV541_05975 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AV541_03985 two-component system response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_04630 pili assembly chaperone K02650 pilA; type IV pilus assembly protein PilA
D AV541_02925 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_03605 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_05660 transporter K12340 tolC; outer membrane protein
D AV541_04865 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AV541_04165 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AV541_03275 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tpar02024]
D AV541_01505 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AV541_07745 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_04090 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_05890 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_07750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_04085 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_05885 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_05880 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_07760 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04075 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AV541_03640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AV541_02925 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_03605 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_05445 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AV541_08370 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AV541_02590 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AV541_04065 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AV541_02595 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AV541_04060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AV541_08350 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AV541_07085 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D AV541_07220 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D AV541_00165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AV541_01825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AV541_02405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AV541_08525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AV541_05570 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D AV541_08030 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tpar04980]
D AV541_01155 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AV541_07555 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D AV541_05660 transporter K12340 tolC; outer membrane protein
C 01502 Vancomycin resistance [PATH:tpar01502]
D AV541_05355 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tpar01503]
D AV541_09585 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AV541_03880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AV541_04125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_09310 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_05660 transporter K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tpar01000]
C 01001 Protein kinases [BR:tpar01001]
D AV541_04305 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:tpar01009]
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_02795 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AV541_10025 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:tpar01002]
D AV541_09030 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AV541_06300 pyrrolidone carboxyl peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D AV541_03000 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AV541_03425 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AV541_01310 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AV541_03595 sugar aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AV541_01035 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D AV541_03530 peptidase K05520 yhbO; deglycase [EC:3.5.1.124]
D AV541_06500 CAAX protease K07052 K07052; CAAX protease family protein
D AV541_03095 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D AV541_00220 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AV541_02270 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D AV541_02415 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AV541_05425 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AV541_02575 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AV541_01330 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D AV541_05005 peptidase M29 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D AV541_03295 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AV541_08680 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AV541_06445 peptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AV541_04125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_09310 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_06890 peptidase S8 K20754 pstI; aqualysin 1 [EC:3.4.21.111]
D AV541_07085 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D AV541_07570 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AV541_05210 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AV541_06880 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AV541_08920 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AV541_09525 repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D AV541_03900 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AV541_01675 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AV541_04250 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AV541_08925 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AV541_03285 endopeptidase IV K04773 sppA; protease IV [EC:3.4.21.-]
D AV541_09925 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D AV541_03395 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D AV541_07475 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:tpar01003]
D AV541_06315 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D AV541_01995 glycosyl transferase K20999 pslF; polysaccharide biosynthesis protein PslF
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AV541_07405 dTDP-rhamnosyl transferase rfbF K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D AV541_08315 alpha,alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tpar01005]
D AV541_04170 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpar01011]
D AV541_09800 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AV541_05330 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AV541_05350 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AV541_09315 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AV541_02540 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AV541_05355 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AV541_09955 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AV541_01580 4-amino-4-deoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AV541_02935 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D AV541_09585 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AV541_03880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tpar01004]
D AV541_07230 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AV541_08615 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AV541_06970 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08625 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_08410 diguanylate cyclase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AV541_01645 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AV541_05975 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AV541_03640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AV541_02030 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AV541_06155 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_06690 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AV541_04005 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tpar01006]
D AV541_01220 UDP pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D AV541_02490 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AV541_10695 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D AV541_07630 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AV541_00500 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tpar01007]
D AV541_07945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AV541_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AV541_09305 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AV541_04245 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AV541_05430 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AV541_04920 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AV541_05545 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AV541_07145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AV541_07160 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AV541_03535 aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D AV541_07975 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AV541_06350 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AV541_01410 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AV541_01565 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_09830 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AV541_10645 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_08565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AV541_02850 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AV541_02660 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AV541_06405 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AV541_06120 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AV541_09710 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tpar03000]
D AV541_10020 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D AV541_10260 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AV541_04990 heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D AV541_08165 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D AV541_10700 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D AV541_00705 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AV541_00215 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D AV541_08170 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AV541_02925 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_03605 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AV541_10940 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D AV541_10705 Crp/Fnr family transcriptional regulator K22490 ldrP; CRP/FNR family transcriptional regulator, LitR-dependent transcriptional activator
D AV541_07175 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D AV541_06950 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D AV541_02480 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D AV541_02160 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D AV541_01015 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D AV541_10805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AV541_09935 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D AV541_02965 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D AV541_09095 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D AV541_06830 transcriptional regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AV541_09765 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:tpar03021]
D AV541_02445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AV541_01660 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AV541_02955 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AV541_08030 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D AV541_07200 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D AV541_05160 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AV541_00160 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AV541_07540 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AV541_05540 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AV541_05440 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tpar03019]
D AV541_05055 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AV541_01635 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AV541_06175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AV541_09450 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AV541_05060 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AV541_05440 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AV541_00975 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AV541_00295 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AV541_06165 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AV541_04115 ribonuclease K02553 rraA; regulator of ribonuclease activity A
C 03041 Spliceosome
C 03011 Ribosome [BR:tpar03011]
D AV541_09900 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AV541_06415 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AV541_02335 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AV541_02440 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AV541_02390 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AV541_00140 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AV541_02285 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AV541_02375 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AV541_03470 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AV541_02300 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AV541_02435 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AV541_02280 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AV541_02430 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AV541_02370 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AV541_05065 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AV541_05575 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AV541_02350 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AV541_00130 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AV541_02325 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AV541_03745 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AV541_03750 ribosomal small subunit protein bTHX K19033 PSRP4; 30S ribosomal protein S31
D AV541_00150 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AV541_02320 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AV541_02305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AV541_02310 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AV541_02365 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AV541_02380 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AV541_00125 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AV541_10140 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AV541_00155 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AV541_10145 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AV541_03465 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AV541_02355 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AV541_02400 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AV541_02340 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AV541_02450 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AV541_02385 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AV541_05595 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AV541_07925 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AV541_01835 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AV541_02330 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AV541_02315 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AV541_02360 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AV541_01840 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AV541_09025 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AV541_02345 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AV541_02395 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AV541_05400 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AV541_08610 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AV541_00170 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AV541_08475 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AV541_07930 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AV541_02425 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AV541_02815 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AV541_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AV541_08845 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AV541_02045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_09770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_08840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AV541_00840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tpar03009]
D AV541_09690 GTPase Era K03595 era; GTPase
D AV541_07200 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D AV541_05160 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AV541_00160 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AV541_09835 16S rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AV541_09230 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AV541_06465 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AV541_06145 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AV541_07355 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AV541_00925 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AV541_05380 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AV541_00970 rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AV541_07960 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D AV541_00435 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AV541_04325 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AV541_03290 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AV541_01090 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AV541_03980 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AV541_05585 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D AV541_04890 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AV541_07360 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AV541_01575 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AV541_09450 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AV541_03775 ribosome biogenesis GTPase Der K03977 engA; GTPase
D AV541_07860 GTP-binding protein HflX K03665 hflX; GTPase
D AV541_02170 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AV541_06190 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AV541_07195 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D AV541_01865 ribosome-associated protein IOJAP K09710 ybeB; ribosome-associated protein
D AV541_05525 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D AV541_04260 hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D AV541_04825 GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:tpar03016]
D AV541_06560 polya polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AV541_02035 phosphoribosylformylglycinamidine synthase K24956 ZBTB8OS; protein archease
D AV541_05430 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AV541_04245 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AV541_07945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AV541_09305 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AV541_05545 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AV541_07145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AV541_01565 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_09830 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AV541_07160 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AV541_07975 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AV541_01410 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AV541_06350 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AV541_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AV541_04920 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AV541_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AV541_02685 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AV541_07610 SAM-dependent methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D AV541_02665 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AV541_02600 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AV541_03100 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D AV541_08435 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AV541_06130 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AV541_08480 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AV541_05390 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AV541_01625 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D AV541_03535 aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D AV541_04195 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AV541_02680 tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D AV541_04855 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D AV541_09725 tRNA (guanine-N2)-dimethyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D AV541_09075 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AV541_00305 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AV541_00230 tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AV541_02580 heme biosynthesis protein HemY K13628 iscA; iron-sulfur cluster assembly protein
D AV541_01615 glycine cleavage system protein T K06980 ygfZ; tRNA-modifying protein YgfZ
D AV541_05475 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AV541_08275 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AV541_08805 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AV541_09910 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AV541_06175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AV541_05060 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tpar03012]
D AV541_07210 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AV541_06420 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AV541_00175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_02295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_01075 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AV541_06430 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D AV541_08500 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AV541_02420 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AV541_05140 elongation factor P K02356 efp; elongation factor P
D AV541_09810 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tpar03110]
D AV541_07980 Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D AV541_00295 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AV541_09965 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AV541_06265 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D AV541_03305 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D AV541_02655 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D AV541_03335 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D AV541_07835 heat-shock protein K13993 HSP20; HSP20 family protein
D AV541_03365 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D AV541_00300 molecular chaperone GroES K04078 groES; chaperonin GroES
D AV541_04125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_09310 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AV541_03295 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AV541_08680 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AV541_01060 transporter K09796 pccA; periplasmic copper chaperone A
D AV541_07085 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D AV541_00715 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AV541_07665 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AV541_02025 thioredoxin K03671 TXN; thioredoxin
D AV541_03360 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AV541_03715 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D AV541_09915 thiol-disulfide isomerase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:tpar04131]
D AV541_10030 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AV541_06200 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AV541_00900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:tpar04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tpar03032]
D AV541_02980 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AV541_04000 integration host factor K03530 hupB; DNA-binding protein HU-beta
D AV541_00915 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AV541_04415 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_00910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AV541_01440 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AV541_02830 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AV541_09175 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tpar03036]
D AV541_04000 integration host factor K03530 hupB; DNA-binding protein HU-beta
D AV541_03315 dafA K18997 cbpM; chaperone modulatory protein CbpM
D AV541_00915 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AV541_04595 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A
D AV541_05320 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AV541_06600 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AV541_05325 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AV541_05420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AV541_05315 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AV541_00615 ATP-binding protein K06916 zapE; cell division protein ZapE
D AV541_09585 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AV541_03880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AV541_04510 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AV541_04515 cell division protein K03608 minE; cell division topological specificity factor
D AV541_07870 cell division protein DivIVA K04074 divIVA; cell division initiation protein
D AV541_01640 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AV541_04800 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AV541_10445 ATP-binding protein K03496 parA; chromosome partitioning protein
D AV541_00930 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AV541_10805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AV541_00925 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AV541_05795 integrase K04763 xerD; integrase/recombinase XerD
D AV541_07370 chromosome partitioning protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:tpar03400]
D AV541_09465 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AV541_01730 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AV541_05020 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AV541_07115 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AV541_00630 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AV541_01690 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AV541_06545 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AV541_04010 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D AV541_05275 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AV541_01320 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AV541_03655 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AV541_01660 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AV541_02445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AV541_02955 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AV541_04110 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AV541_00910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AV541_01440 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_01630 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D AV541_00410 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AV541_08670 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AV541_05310 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AV541_10390 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D AV541_10385 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D AV541_07985 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AV541_09080 ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AV541_02770 recombination protein RecR K06187 recR; recombination protein RecR
D AV541_00090 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D AV541_02830 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AV541_09175 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AV541_04000 integration host factor K03530 hupB; DNA-binding protein HU-beta
D AV541_09525 repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D AV541_06480 recombinase RecX K03565 recX; regulatory protein
D AV541_09510 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tpar03029]
D AV541_07210 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AV541_06420 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AV541_00175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_02295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_09690 GTPase Era K03595 era; GTPase
D AV541_07145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AV541_07975 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AV541_09305 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AV541_01720 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AV541_00815 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AV541_06345 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AV541_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AV541_07885 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D AV541_03305 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D AV541_00295 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AV541_00300 molecular chaperone GroES K04078 groES; chaperonin GroES
D AV541_09965 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AV541_08435 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AV541_07370 chromosome partitioning protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AV541_00500 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AV541_01065 electron transporter K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tpar02000]
D AV541_04045 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AV541_07120 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AV541_07125 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D AV541_07130 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AV541_06875 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AV541_06870 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AV541_02615 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AV541_02610 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AV541_01680 ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AV541_04540 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AV541_04535 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D AV541_04530 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D AV541_04525 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AV541_02505 sugar ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D AV541_02510 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D AV541_02515 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D AV541_00770 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AV541_00765 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AV541_00760 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AV541_01095 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AV541_05270 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D AV541_04230 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AV541_04225 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AV541_04215 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AV541_08790 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AV541_01585 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AV541_05785 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AV541_01360 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AV541_00235 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D AV541_00240 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D AV541_00245 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D AV541_00250 phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AV541_07745 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_04090 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AV541_05890 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_07750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_04085 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AV541_05885 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_05880 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_07760 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04075 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AV541_04070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AV541_04910 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AV541_04915 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AV541_04970 peptide ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AV541_08370 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AV541_02590 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AV541_04065 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AV541_02595 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AV541_04060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AV541_08350 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AV541_07090 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AV541_06990 iron ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D AV541_06980 iron ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D AV541_07695 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AV541_08445 manganese transporter K09816 znuB; zinc transport system permease protein
D AV541_08450 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AV541_08700 permease K11720 lptG; lipopolysaccharide export system permease protein
D AV541_08510 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AV541_01170 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D AV541_01165 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D AV541_03700 cytochrome C assembly protein K02195 ccmC; heme exporter protein C
D AV541_03690 ABC transporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AV541_05420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AV541_04705 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D AV541_04700 ABC transporter K25156 evrA; viologen exporter family transport system ATP-binding protein
D AV541_01335 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AV541_03490 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AV541_01340 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AV541_06050 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AV541_01555 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AV541_05640 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AV541_01550 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AV541_05645 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AV541_01530 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AV541_06020 hypothetical protein K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D AV541_00740 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D AV541_07260 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D AV541_09085 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D AV541_07445 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D AV541_07515 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D AV541_02180 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D AV541_05465 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D AV541_07235 tolQ protein K03561 exbB; biopolymer transport protein ExbB
D AV541_07030 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AV541_07045 transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D AV541_05660 transporter K12340 tolC; outer membrane protein
D AV541_07885 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D AV541_01070 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family
D AV541_02240 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family
D AV541_06115 transporter K03297 emrE; small multidrug resistance pump
D AV541_02460 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family
D AV541_07715 sodium:proton exchanger K07301 yrbG; cation:H+ antiporter
D AV541_06635 cation acetate symporter K14393 actP; cation/acetate symporter
D AV541_06125 potassium transporter K11105 cvrA; potassium/hydrogen antiporter
D AV541_03380 potassium transporter TrkA K07228 khtT; K+:H+ antiporter subunit KhtT
D AV541_03385 sodium:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU
D AV541_04895 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D AV541_06370 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D AV541_10570 nickel permease K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D AV541_07345 transporter K24180 mleP; malate permease and related proteins
D AV541_00060 transporter K26605 azlC; branched chain amino acid efflux pump
D AV541_00055 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D AV541_10200 transporter K09125 yhhQ; queuosine precursor transporter
D AV541_05025 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D AV541_03685 cytochrome C biogenesis protein CcmH K06196 ccdA; cytochrome c-type biogenesis protein
D AV541_02120 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D AV541_10955 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AV541_03710 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:tpar02044]
D AV541_05660 transporter K12340 tolC; outer membrane protein
D AV541_04630 pili assembly chaperone K02650 pilA; type IV pilus assembly protein PilA
D AV541_03835 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D AV541_03830 competence protein K02663 pilN; type IV pilus assembly protein PilN
D AV541_03825 competence protein K02664 pilO; type IV pilus assembly protein PilO
D AV541_03815 competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D AV541_01880 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AV541_00810 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AV541_04650 general secretion pathway protein GspH K08084 fimT; type IV fimbrial biogenesis protein FimT
D AV541_04655 prepilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D AV541_00945 DNA-binding protein K02237 comEA; competence protein ComEA
D AV541_07220 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D AV541_00165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AV541_01825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AV541_02405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AV541_05570 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AV541_08525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AV541_07490 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D AV541_08750 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tpar02042]
D AV541_07030 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AV541_03250 hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tpar02022]
D AV541_05600 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D AV541_03985 two-component system response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
C 02035 Bacterial motility proteins [BR:tpar02035]
D AV541_01880 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AV541_00810 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AV541_04630 pili assembly chaperone K02650 pilA; type IV pilus assembly protein PilA
D AV541_03815 competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D AV541_03825 competence protein K02664 pilO; type IV pilus assembly protein PilO
D AV541_03830 competence protein K02663 pilN; type IV pilus assembly protein PilN
D AV541_03835 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tpar04812]
D AV541_06170 hypothetical protein K06990 MEMO1; MEMO1 family protein
D AV541_01640 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AV541_05315 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AV541_05320 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AV541_04510 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AV541_04515 cell division protein K03608 minE; cell division topological specificity factor
D AV541_10445 ATP-binding protein K03496 parA; chromosome partitioning protein
D AV541_00930 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AV541_10805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tpar04147]
D AV541_06200 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AV541_06195 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AV541_00900 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AV541_00295 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AV541_00330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AV541_00175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_02295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AV541_02685 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AV541_05200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AV541_03640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AV541_02410 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AV541_02700 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AV541_02705 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AV541_00370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AV541_07700 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AV541_10280 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AV541_04095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AV541_02780 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AV541_01705 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AV541_10660 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AV541_06135 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AV541_00050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_00390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AV541_02885 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AV541_05980 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tpar02048]
D AV541_09195 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D AV541_01805 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AV541_02845 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AV541_08655 methyltransferase K24451 zim; modification methylase
D AV541_09395 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AV541_03925 restriction endonuclease K07448 mrr; restriction system protein
D AV541_01235 hypothetical protein K18843 hicB; antitoxin HicB
D AV541_08195 protein transcription factor K19687 vapB; antitoxin VapB
D AV541_10775 plasmid stabilization protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D AV541_05315 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AV541_01640 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AV541_08435 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AV541_00080 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC
D AV541_09560 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tpar01504]
D AV541_09750 aminoglycoside 6'-acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D AV541_05660 transporter K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tpar00537]
D AV541_10660 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tpar03100]
D AV541_06410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_09210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_01830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AV541_09375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_00745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_07510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_01150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AV541_00145 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AV541_03860 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AV541_08225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AV541_01185 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AV541_04840 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AV541_01190 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_01195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_00545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AV541_00185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_07505 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_08850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_00830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AV541_07585 tRNA-His K14226 tRNA-His; tRNA His
D AV541_09680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AV541_04585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_09905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_08290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_07580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_07075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AV541_00540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AV541_03450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AV541_03070 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_08405 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_01710 tRNA-Met K14230 tRNA-Met; tRNA Met
D AV541_03855 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AV541_07500 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_06150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_09355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AV541_02225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_02230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_03060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_06575 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AV541_01820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_00195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_00180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AV541_01305 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AV541_00190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AV541_08220 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_00550 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_05615 tRNA-Val K14237 tRNA-Val; tRNA Val
D AV541_02045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_09770 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AV541_08840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AV541_00840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AV541_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AV541_08845 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AV541_01345 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D AV541_05390 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AV541_07190 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AV541_03120 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AV541_07335 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AV541_09870 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AV541_01545 NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D AV541_04660 thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D AV541_09700 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D AV541_04235 thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AV541_02630 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AV541_08380 ferredoxin--NADP(+) reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AV541_03355 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D AV541_01475 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AV541_05215 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D AV541_02910 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D AV541_07995 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D AV541_08765 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AV541_08230 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D AV541_10165 kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D AV541_02245 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D AV541_09755 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D AV541_05860 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D AV541_01495 esterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AV541_03550 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AV541_05780 neutral trehalase K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D AV541_00590 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AV541_04745 bacillithiol biosynthesis deacetylase BshB1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D AV541_09785 deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AV541_08415 DNA mismatch repair protein MutT K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D AV541_00320 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AV541_03260 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AV541_00675 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D AV541_00340 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D AV541_02095 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AV541_07725 HAD family hydrolase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D AV541_07170 metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D AV541_02235 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D AV541_06585 acetoin dehydrogenase K04767 acuB; acetoin utilization protein AcuB
D AV541_08345 acetoin dehydrogenase K04767 acuB; acetoin utilization protein AcuB
D AV541_03915 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D AV541_03910 (Fe-S)-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
C 99982 Energy metabolism
D AV541_02085 SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D AV541_01115 Rieske (2Fe-2S) protein K15878 K15878; rieske iron-sulfur protein
D AV541_01120 menaquinol-cytochrome C reductase K15879 narC; cytochrome b-561
D AV541_05040 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D AV541_03635 dodecin flavoprotein K09165 K09165; dodecin
C 99983 Lipid metabolism
D AV541_05960 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D AV541_06295 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D AV541_07875 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D AV541_09390 hypothetical protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AV541_09970 cold-shock protein K03704 cspA; cold shock protein
D AV541_00785 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
D AV541_00200 ribonuclease K07576 K07576; metallo-beta-lactamase family protein
D AV541_10670 hypothetical protein K07578 K07578; homologs of the eukaryotic argonaute protein
C 99975 Protein processing
D AV541_07575 tig; trigger factor K03545 tig; trigger factor
D AV541_06220 SsrA-binding protein K03664 smpB; SsrA-binding protein
D AV541_00465 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D AV541_10105 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D AV541_03875 osmotically inducible protein OsmC K07397 yhfA; putative redox protein
D AV541_05505 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D AV541_08820 hypothetical protein K07460 yraN; putative endonuclease
D AV541_09695 DNA processing protein DprA K04096 smf; DNA processing protein
D AV541_01370 AAA family ATPase K07478 ycaJ; putative ATPase
D AV541_09430 hypothetical protein K06919 K06919; putative DNA primase/helicase
D AV541_10470 DNA-binding protein K07486 K07486; transposase
D AV541_10480 DNA-binding protein K07486 K07486; transposase
D AV541_10530 DNA-binding protein K07486 K07486; transposase
D AV541_06000 transposase K07491 rayT; REP-associated tyrosine transposase
D AV541_04485 transposase K07493 K07493; putative transposase
D AV541_10475 transposase K07493 K07493; putative transposase
D AV541_05995 transposase K07496 K07496; putative transposase
D AV541_01145 transposase K07497 K07497; putative transposase
D AV541_09515 integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D AV541_00865 phage shock protein A K03969 pspA; phage shock protein A
D AV541_06520 sulfurtransferase K03972 pspE; phage shock protein E
D AV541_02775 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AV541_02255 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D AV541_06470 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
D AV541_05095 gliding-motility protein MglA K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
C 99992 Structural proteins
D AV541_06595 hypothetical protein K06142 hlpA; outer membrane protein
D AV541_05650 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AV541_03705 disulfide bond formation protein DsbF K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D AV541_04885 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D AV541_09815 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D AV541_03965 cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AV541_04430 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D AV541_08145 molecular chaperone K06878 K06878; tRNA-binding protein
D AV541_04960 patatin K07001 K07001; NTE family protein
D AV541_03895 phospholipase K07001 K07001; NTE family protein
D AV541_02710 hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D AV541_03155 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D AV541_01125 ribonuclease BN K07058 K07058; membrane protein
D AV541_03480 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D AV541_06915 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D AV541_00725 hypothetical protein K08972 K08972; putative membrane protein
D AV541_02625 hypothetical protein K08980 K08980; putative membrane protein
D AV541_02115 hypothetical protein K08982 K08982; putative membrane protein
D AV541_02150 hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D AV541_02565 phospholipase K06889 K06889; uncharacterized protein
D AV541_03455 AAA+ family ATPase K06923 K06923; uncharacterized protein
D AV541_01290 CoA-binding protein K06929 K06929; uncharacterized protein
D AV541_05580 RNA-binding protein K06960 K06960; uncharacterized protein
D AV541_06255 Zn-dependent protease K06973 K06973; uncharacterized protein
D AV541_09495 peptidase C39 K06992 K06992; uncharacterized protein
D AV541_00070 DNA-binding protein K07063 K07063; uncharacterized protein
D AV541_10435 DNA-binding protein K07064 K07064; uncharacterized protein
D AV541_06840 nuclease K07064 K07064; uncharacterized protein
D AV541_05985 twitching motility protein PilT K07065 K07065; uncharacterized protein
D AV541_04610 DNA polymerase III subunit beta K07075 K07075; uncharacterized protein
D AV541_04735 nucleotidyltransferase K07075 K07075; uncharacterized protein
D AV541_08735 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D AV541_04980 TRAP transporter K07080 K07080; uncharacterized protein
D AV541_04140 TRAP transporter K07080 K07080; uncharacterized protein
D AV541_04150 TRAP transporter K07080 K07080; uncharacterized protein
D AV541_08120 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein
D AV541_07315 permease K07090 K07090; uncharacterized protein
D AV541_06820 permease K07090 K07090; uncharacterized protein
D AV541_03340 heat-stable protein K07096 K07096; uncharacterized protein
D AV541_09070 phosphohydrolase K07096 K07096; uncharacterized protein
D AV541_06485 phosphohydrolase K07099 K07099; uncharacterized protein
D AV541_09475 ABC transporter ATP-binding protein K07128 K07128; uncharacterized protein
D AV541_06340 hypothetical protein K07150 K07150; uncharacterized protein
D AV541_02635 hypothetical protein K07164 K07164; uncharacterized protein
D AV541_08485 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AV541_02695 hypothetical protein K08999 K08999; uncharacterized protein
D AV541_02730 hypothetical protein K09005 K09005; uncharacterized protein
D AV541_06395 hypothetical protein K09117 K09117; uncharacterized protein
D AV541_05305 adenosine monophosphate-protein transferase K09129 K09129; uncharacterized protein
D AV541_00655 hypothetical protein K09137 K09137; uncharacterized protein
D AV541_03625 phosphohydrolase K09163 K09163; uncharacterized protein
D AV541_09145 hypothetical protein K09763 K09763; uncharacterized protein
D AV541_07890 hypothetical protein K09764 K09764; uncharacterized protein
D AV541_05170 acid phosphatase K09775 K09775; uncharacterized protein
D AV541_08775 hypothetical protein K09793 K09793; uncharacterized protein
D AV541_05675 peptidase K09939 K09939; uncharacterized protein
D AV541_03785 hypothetical protein K09940 K09940; uncharacterized protein
D AV541_06250 hypothetical protein K09981 K09981; uncharacterized protein
D AV541_08395 hypothetical protein K07586 ygaC; uncharacterized protein
D AV541_07205 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 23, 2024