+D GENES KO #

  KEGG Orthology (KO) - Treponema pedis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tped00010] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_0663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_2720 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_2727 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TPE_1803 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TPE_1417 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TPE_0438 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2734 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TPE_2270 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TPE_0268 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_0041 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_0803 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_1954 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:tped00020] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_2044 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TPE_2043 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TPE_0803 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:tped00030] D TPE_0663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TPE_1132 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D TPE_2022 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D TPE_2020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D TPE_0584 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0599 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TPE_0516 KHG/KDPG family aldolase/carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_2720 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D TPE_1132 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:tped00051] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_2720 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_2727 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tped00052] D TPE_1954 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D TPE_0662 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_1674 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_2728 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:tped00500] D TPE_1945 glycosyl hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D TPE_1743 putative glycoside hydrolase family protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D TPE_1964 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D TPE_2097 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D TPE_1105 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D TPE_1748 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D TPE_2456 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D TPE_0757 alpha-amylase K01214 ISA; isoamylase [EC:3.2.1.68] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_0663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tped00520] D TPE_2101 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TPE_0736 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TPE_0580 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_1773 glmS; glucosamine--fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TPE_2333 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TPE_2795 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TPE_0195 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D TPE_0208 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D TPE_0183 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D TPE_0186 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D TPE_0188 transferase hexapeptide repeat containingprotein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D TPE_0207 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D TPE_0201 sialic acid synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D TPE_0202 putative N-acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0662 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_1674 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_2728 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TPE_0663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TPE_0191 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D TPE_1964 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tped00620] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_0803 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1458 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D TPE_1898 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TPE_1070 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TPE_2270 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TPE_2024 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D TPE_2027 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D TPE_2026 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D TPE_2025 accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D TPE_0753 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TPE_1416 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D TPE_2302 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TPE_0529 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TPE_0046 rhodanese-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TPE_1890 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D TPE_1041 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D TPE_1044 Na+ transporting oxaloacetate decarboxylasesubunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TPE_2044 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TPE_2043 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TPE_0268 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_0041 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tped00630] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_1191 glmE; methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D TPE_1063 mamA; methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D TPE_1176 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D TPE_1746 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TPE_0984 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D TPE_0765 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TPE_1846 gcvP1; glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TPE_1847 gcvP2; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TPE_1841 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1845 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:tped00640] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_1898 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TPE_1070 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1458 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D TPE_2024 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D TPE_2027 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D TPE_2026 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D TPE_2025 accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] C 00650 Butanoate metabolism [PATH:tped00650] D TPE_2028 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D TPE_1963 iron-containing alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-] D TPE_1044 Na+ transporting oxaloacetate decarboxylasesubunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TPE_1043 oadB; biotin/lipoyl attachment domain-containingprotein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TPE_1042 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D TPE_1458 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D TPE_0803 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D TPE_0836 mtnN; GroES-like protein K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] C 00660 C5-Branched dibasic acid metabolism [PATH:tped00660] D TPE_1176 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D TPE_1191 glmE; methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D TPE_1063 mamA; methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] C 00562 Inositol phosphate metabolism D TPE_2727 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tped00190] D TPE_0918 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D TPE_1793 V-type ATP synthase subunit alpha K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D TPE_1799 atpA; V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D TPE_0481 V-type ATP synthase subunit beta K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D TPE_1798 atpB; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D TPE_0482 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D TPE_1797 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D TPE_1792 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D TPE_1503 atpE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D TPE_1523 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D TPE_1796 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D TPE_1790 H+transporting two-sector ATPase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D TPE_1795 ntpK; two-sector ATPase, V(0) subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tped00710] D TPE_1417 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TPE_1803 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_2022 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D TPE_2020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D TPE_2727 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TPE_1132 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D TPE_0268 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_0041 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:tped00720] D TPE_0803 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D TPE_0268 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_0041 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D TPE_2044 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TPE_2043 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TPE_2024 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D TPE_2027 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D TPE_2026 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D TPE_2025 accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D TPE_0465 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D TPE_2311 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D TPE_0399 formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D TPE_1070 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TPE_1898 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tped00680] D TPE_0765 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TPE_1746 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_1898 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TPE_1070 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_0438 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2734 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:tped00910] D TPE_2127 gdhA; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D TPE_1106 gltA; oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TPE_1686 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:tped00920] D TPE_0256 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0933 nitrate/sulfonate/bicarbonate ABC transporterperiplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0254 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0935 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0255 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_0936 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_2315 DHH super, subfamily 1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tped00061] D TPE_2024 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D TPE_2027 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D TPE_2026 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D TPE_2025 accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D TPE_2349 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D TPE_2031 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TPE_2032 fabH; 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D TPE_2029 fabF; 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D TPE_2030 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TPE_1820 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TPE_2028 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D TPE_0470 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_0666 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2471 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tped00071] D TPE_0470 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_0666 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2471 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:tped00074] D TPE_2197 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D TPE_2349 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D TPE_2031 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tped00561] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TPE_2255 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D TPE_1689 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:tped00564] D TPE_0330 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D TPE_2253 oxidoreductase, FAD-dependent K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D TPE_1066 oxidoreductase, FAD-dependent K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D TPE_1689 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TPE_2001 glycerophosphoryl diester phosphodiesterasefamily protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TPE_0586 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TPE_2152 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D TPE_1083 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D TPE_0567 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D TPE_0629 alkyl-dihydroxyacetonephosphate synthase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] C 00600 Sphingolipid metabolism [PATH:tped00600] D TPE_0275 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D TPE_2363 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tped00230] D TPE_2364 MutT/nudix K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0599 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TPE_1985 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TPE_1652 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D TPE_2275 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D TPE_2530 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TPE_2723 purL; phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D TPE_2018 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D TPE_2498 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D TPE_2497 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D TPE_1779 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TPE_1813 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TPE_1800 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D TPE_0395 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TPE_2782 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D TPE_0313 guaB; inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TPE_0750 HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D TPE_0404 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TPE_0488 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TPE_0578 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D TPE_2085 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D TPE_0706 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D TPE_1422 RelA/SpoT K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D TPE_1197 adenylate/guanylate cyclase catalytic K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TPE_2595 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TPE_0660 phosphatase/nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D TPE_0485 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D TPE_2355 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TPE_1686 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:tped00240] D TPE_0810 pyrB; bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2] D TPE_0366 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D TPE_0888 dihydroorotate dehydrogenase/oxidoreductase, FAD-binding protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D TPE_2148 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D TPE_2017 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D TPE_2196 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D TPE_2202 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D TPE_0266 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D TPE_1656 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D TPE_2340 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D TPE_0395 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TPE_1884 phosphoribosyl transferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D TPE_0660 phosphatase/nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D TPE_0485 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D TPE_1754 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D TPE_2218 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D TPE_2085 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D TPE_0488 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TPE_0578 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D TPE_2099 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D TPE_0338 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D TPE_1103 dut; deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TPE_2648 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tped00250] D TPE_1804 putative aspartate/glutamate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TPE_2370 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D TPE_1779 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TPE_0810 pyrB; bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2] D TPE_1106 gltA; oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TPE_2127 gdhA; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D TPE_2530 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TPE_1773 glmS; glucosamine--fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TPE_1985 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tped00260] D TPE_1801 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TPE_0760 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TPE_0765 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TPE_1746 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TPE_0438 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2734 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_1885 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D TPE_1846 gcvP1; glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TPE_1847 gcvP2; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TPE_1841 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1845 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D TPE_0221 sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D TPE_0222 sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:tped00270] D TPE_1090 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D TPE_2729 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D TPE_0492 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D TPE_0833 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D TPE_2499 mtnK; methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D TPE_2314 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D TPE_1938 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D TPE_0406 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D TPE_0221 sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D TPE_0222 sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:tped00280] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_2051 3-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:tped00300] D TPE_0035 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TPE_0889 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TPE_2122 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tped00310] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_0544 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:tped00220] D TPE_2385 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D TPE_0003 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D TPE_2530 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TPE_1686 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D TPE_2127 gdhA; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] C 00330 Arginine and proline metabolism [PATH:tped00330] D TPE_1508 pyridoxal-dependent family decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TPE_0296 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D TPE_1008 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TPE_1211 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:tped00340] D TPE_0754 histidinol phosphate phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D TPE_2052 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D TPE_2708 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D TPE_0727 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D TPE_0827 formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism D TPE_1499 tpl; tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism D TPE_1008 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:tped00380] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1510 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TPE_1008 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tped00400] D TPE_0533 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D TPE_0491 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D TPE_2019 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D TPE_1074 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D TPE_2145 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D TPE_1991 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D TPE_0267 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00430 Taurine and hypotaurine metabolism [PATH:tped00430] D TPE_2127 gdhA; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D TPE_1070 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TPE_1898 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tped00450] D TPE_1090 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D TPE_1938 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D TPE_0457 class V aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D TPE_1226 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D TPE_0932 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TPE_2583 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TPE_2384 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D TPE_0766 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tped00460] D TPE_1945 glycosyl hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D TPE_0765 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tped00470] D TPE_2538 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TPE_1653 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TPE_2530 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TPE_1957 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D TPE_1057 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TPE_1804 putative aspartate/glutamate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 00480 Glutathione metabolism [PATH:tped00480] D TPE_0707 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TPE_1481 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D TPE_0857 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D TPE_1508 pyridoxal-dependent family decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:tped00511] D TPE_0275 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D TPE_2363 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:tped00542] D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tped00541] D TPE_2728 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TPE_0215 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TPE_0218 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TPE_0216 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TPE_0217 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D TPE_0191 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D TPE_0195 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D TPE_0208 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D TPE_0183 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D TPE_0186 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D TPE_0188 transferase hexapeptide repeat containingprotein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D TPE_0207 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:tped00550] D TPE_2333 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TPE_2795 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TPE_1658 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D TPE_1057 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TPE_0889 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TPE_1653 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TPE_2122 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D TPE_2153 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D TPE_0813 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TPE_0969 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TPE_2401 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D TPE_2231 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TPE_2579 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TPE_1788 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TPE_0168 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TPE_0006 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D TPE_0368 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:tped00552] D TPE_0813 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D TPE_1678 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D TPE_0211 lipopolysaccharide biosynthesis protein LicD K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:tped00543] D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D TPE_2037 alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D TPE_0922 algI; alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tped00730] D TPE_0490 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TPE_0534 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TPE_2200 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D TPE_1956 yjeQ; GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TPE_2608 GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TPE_2355 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tped00740] D TPE_0962 riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D TPE_2364 MutT/nudix K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:tped00750] D TPE_0825 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D TPE_1801 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TPE_0760 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TPE_1080 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:tped00760] D TPE_0729 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D TPE_2782 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D TPE_0395 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TPE_0429 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D TPE_0149 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D TPE_1427 cinA; competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D TPE_2765 Sir2 family transcriptional regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D TPE_2049 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D TPE_1737 putative NADPH-NAD transhydrogenase alphasubunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D TPE_1738 NADPH-NAD transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D TPE_1736 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:tped00770] D TPE_0341 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D TPE_2490 dfp; fused 4'-phosphopantothenoylcysteinedecarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D TPE_2519 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D TPE_1751 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D TPE_2197 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:tped00780] D TPE_2029 fabF; 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D TPE_2030 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TPE_1820 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TPE_2023 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tped00785] D TPE_0768 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D TPE_0767 yhfJ; lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_1846 gcvP1; glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TPE_1847 gcvP2; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TPE_1841 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TPE_1845 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tped00790] D TPE_1667 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D TPE_1666 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D TPE_1659 folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D TPE_1668 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:tped00670] D TPE_1666 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D TPE_0465 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D TPE_2311 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D TPE_0399 formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D TPE_0765 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TPE_2275 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D TPE_1813 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TPE_0827 formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D TPE_0196 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TPE_2732 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TPE_1841 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TPE_2648 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D TPE_0547 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tped00860] D TPE_0762 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TPE_1168 cbiK; cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D TPE_1167 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D TPE_1164 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D TPE_0612 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D TPE_0613 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D TPE_1163 precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D TPE_1457 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D TPE_2718 precorrin-8W decarboxylase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D TPE_2717 precorrin-6Y C5,15-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D TPE_0007 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D TPE_1166 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D TPE_1031 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TPE_0816 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D TPE_2768 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D TPE_1485 cobU; cobinamide kinase/cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D TPE_1484 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D TPE_1862 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D TPE_1483 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D TPE_0828 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tped00130] D TPE_1242 ubiquinone/menaquinone biosynthesismethyltransferase UBIE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D TPE_1243 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tped00900] D TPE_2200 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D TPE_2151 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D TPE_1908 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D TPE_1532 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D TPE_1907 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D TPE_2248 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D TPE_2539 ispH; hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D TPE_2153 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D TPE_2022 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tped00523] D TPE_0215 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TPE_0218 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TPE_0216 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TPE_0217 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:tped01054] D TPE_1804 putative aspartate/glutamate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D TPE_0218 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:tped00946] D TPE_1945 glycosyl hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tped00521] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_2214 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_2574 phosphohexose mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TPE_0215 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TPE_0218 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TPE_0216 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TPE_0217 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] C 00525 Acarbose and validamycin biosynthesis [PATH:tped00525] D TPE_0215 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TPE_0218 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D TPE_2031 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TPE_2030 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D TPE_2349 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tped00999] D TPE_2729 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D TPE_2019 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D TPE_1945 glycosyl hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D TPE_1044 Na+ transporting oxaloacetate decarboxylasesubunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TPE_1043 oadB; biotin/lipoyl attachment domain-containingprotein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TPE_1042 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation [PATH:tped00627] D TPE_1008 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TPE_0753 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:tped00625] D TPE_1189 alcohol dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:tped00643] D TPE_1008 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tped03020] D TPE_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TPE_0449 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TPE_2621 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TPE_0028 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D TPE_1182 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tped03010] D TPE_1924 cytidylate kinase K02945 RP-S1; small subunit ribosomal protein S1 D TPE_2156 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D TPE_2638 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D TPE_0173 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D TPE_2628 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D TPE_1447 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D TPE_2469 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D TPE_2631 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D TPE_0272 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D TPE_2644 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D TPE_2622 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D TPE_2468 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D TPE_2623 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D TPE_0961 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D TPE_2567 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D TPE_2635 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D TPE_1445 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D TPE_1423 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D TPE_1880 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D TPE_0445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D TPE_2640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D TPE_2643 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D TPE_2642 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D TPE_2632 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D TPE_2630 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D TPE_0447 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D TPE_1444 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D TPE_0446 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D TPE_0444 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D TPE_0273 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D TPE_2634 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D TPE_2626 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D TPE_2637 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D TPE_2620 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D TPE_2629 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D TPE_2563 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D TPE_2543 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D TPE_0425 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D TPE_2641 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D TPE_2633 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D TPE_1534 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D TPE_0427 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D TPE_2606 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D TPE_2636 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D TPE_2627 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D TPE_2367 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D TPE_2348 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D TPE_2780 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D TPE_2542 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D TPE_16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TPE_23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TPE_5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TPE_5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tped00970] D TPE_tRNA26Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA33Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA6Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA44Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA40Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA9Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA16Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA21Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TPE_tRNA18Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TPE_tRNA3Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TPE_tRNA4Gln tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TPE_tRNA10Pseudo tRNA-OTHER K14223 tRNA-Gln; tRNA Gln D TPE_tRNA5Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TPE_tRNA17Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TPE_tRNA12Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA37Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA28Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA43His tRNA-His K14226 tRNA-His; tRNA His D TPE_tRNA7Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TPE_tRNA27Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA24Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA22Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA36Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA35Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA31Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TPE_tRNA20Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TPE_tRNA34Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA23Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA15Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA11Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TPE_tRNA19Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA8Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA25Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA41Pseudo tRNA-OTHER K14233 tRNA-Ser; tRNA Ser D TPE_tRNA42Ser tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TPE_tRNA39Pseudo tRNA-OTHER K14233 tRNA-Ser; tRNA Ser D TPE_tRNA38Ser tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TPE_tRNA1Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA14Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA29Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA2Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TPE_tRNA30Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TPE_tRNA13Val tRNA-Val K14237 tRNA-Val; tRNA Val D TPE_tRNA45Val tRNA-Val K14237 tRNA-Val; tRNA Val D TPE_tRNA32SeCp tRNA-Sec K14238 tRNA-Sec; tRNA Sec D TPE_0762 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TPE_1216 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D TPE_2488 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D TPE_2260 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TPE_2034 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TPE_0005 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TPE_0732 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TPE_0461 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TPE_1755 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TPE_2384 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D TPE_0772 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TPE_1410 glycoside hydrolase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TPE_0766 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TPE_0196 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TPE_2732 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TPE_0419 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TPE_1560 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TPE_0792 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TPE_1959 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TPE_0588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TPE_2086 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TPE_1482 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TPE_0672 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TPE_0480 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TPE_2354 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TPE_2235 tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tped03060] D TPE_2625 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TPE_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D TPE_1527 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D TPE_2346 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D TPE_2345 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D TPE_2347 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D TPE_2777 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D TPE_2285 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TPE_0334 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TPE_1972 sY; signal recognition particle-docking protein sY K03110 ftsY; fused signal recognition particle receptor D TPE_1250 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_1249 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_0976 Peptidase S24/S26A/S26B, conserved region K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_0167 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_1857 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_2296 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tped04122] D TPE_0490 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TPE_0930 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TPE_2500 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D TPE_1854 cfa; thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D TPE_1769 rhodanese domain-containing protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D TPE_0534 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:tped03018] D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TPE_0960 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D TPE_2131 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TPE_0387 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_2806 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_1544 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D TPE_1140 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_2015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TPE_2318 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TPE_2523 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tped03030] D TPE_2215 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TPE_0894 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TPE_0539 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_2587 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_0964 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TPE_0776 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TPE_2739 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D TPE_1780 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0532 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D TPE_1942 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tped03410] D TPE_0811 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TPE_2450 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D TPE_2352 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TPE_2590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_1778 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tped03420] D TPE_2372 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D TPE_1928 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D TPE_2366 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D TPE_0453 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D TPE_1981 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_2339 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TPE_1182 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:tped03430] D TPE_0346 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D TPE_1486 MutS family DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D TPE_1850 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D TPE_1981 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_2339 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_0241 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D TPE_1849 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D TPE_1778 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0894 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TPE_0776 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TPE_0539 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_2587 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_0964 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TPE_2215 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TPE_0648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:tped03440] D TPE_1778 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0777 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D TPE_2721 recR; recombination protein RecR K06187 recR; recombination protein RecR D TPE_1118 recA; recombinase A K03553 recA; recombination protein RecA D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_0400 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D TPE_1962 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D TPE_0401 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D TPE_0834 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TPE_2667 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TPE_0894 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TPE_0776 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TPE_0539 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_2587 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_0964 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TPE_2215 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TPE_2351 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:tped03250] D TPE_2774 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tped02010] D TPE_0256 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0933 nitrate/sulfonate/bicarbonate ABC transporterperiplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0254 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0935 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0255 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_0936 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_0248 ABC transporter periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D TPE_0614 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D TPE_0251 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D TPE_0615 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D TPE_0250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TPE_0616 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TPE_0301 thiamine ABC transporter thiamine-binding protein K02064 thiB; thiamine transport system substrate-binding protein D TPE_0302 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D TPE_0303 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D TPE_2455 ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D TPE_2451 family 1 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D TPE_2453 binding-protein-dependent transport system innermembrane protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TPE_2454 binding-protein-dependent transport system innermembrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TPE_1411 membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D TPE_1413 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D TPE_1414 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D TPE_1412 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D TPE_0247 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein D TPE_2605 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D TPE_0244 mglA; galactoside ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D TPE_1955 lipoprotein K02044 phnD; phosphonate transport system substrate-binding protein D TPE_1501 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D TPE_1502 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D TPE_1500 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D TPE_2092 oligopeptide ABC transporter substrate-bindingprotein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_0986 solute-binding family 5 protein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_2091 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_0840 oligopeptide/dipeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_2090 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_0839 oligopeptide/dipeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_2089 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_0838 oligopeptide/dipeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_2088 ykfD; oligopeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_0837 oligopeptide/dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_2552 nickel ABC transporter periplasmicnickel-binding protein K15584 nikA; nickel transport system substrate-binding protein D TPE_2551 nikA; nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein D TPE_2550 nickel transporter permease NikC K15586 nikC; nickel transport system permease protein D TPE_2549 nikC; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D TPE_2548 nikE; nickel transporter ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D TPE_0496 oligopeptide/dipeptide ABC transporter peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0499 oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0500 oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0502 ABC transporter permease K13894 yejB; microcin C transport system permease protein D TPE_0501 oligopeptide/dipeptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D TPE_1665 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D TPE_0624 cation ABC transporter permease K09816 znuB; zinc transport system permease protein D TPE_0623 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D TPE_2757 troA; zinc ABC transporter periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D TPE_2755 troC; zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D TPE_2754 troD; zinc ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D TPE_2756 troB; zinc ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D TPE_2312 cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D TPE_2329 cobalt transporter K02008 cbiQ; cobalt/nickel transport system permease protein D TPE_2330 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D TPE_0382 hypothetical protein K10094 cbiK; nickel transport protein D TPE_2313 hypothetical protein K16915 cbiL; nickel transport protein D TPE_0309 BioY protein K03523 bioY; biotin transport system substrate-specific component D TPE_0307 hypothetical protein K16783 bioN; biotin transport system permease protein D TPE_0308 polyamine-transporting ATPase K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D TPE_0699 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein D TPE_1404 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D TPE_1995 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D TPE_0476 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D TPE_1058 lipoprotein K23510 rfuA; riboflavin transport system substrate-binding protein D TPE_1060 branched-chain amino acid ABC transporter permease K23511 rfuC; riboflavin transport system permease protein D TPE_1061 branched-chain amino acid ABC transporter permease K23512 rfuD; riboflavin transport system permease protein D TPE_1059 ABC transporter ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein D TPE_1968 lipoprotein releasing system, permease K09808 lolC_E; lipoprotein-releasing system permease protein D TPE_1970 lipoprotein releasing system, permease K09808 lolC_E; lipoprotein-releasing system permease protein D TPE_1969 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D TPE_0018 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D TPE_0019 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D TPE_1477 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D TPE_0478 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0696 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0861 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_1391 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_1993 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_2404 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0474 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0695 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0881 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_1392 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_2394 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_2405 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0363 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_1435 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_1436 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_0364 multidrug ABC transport system ATP-binding andpermease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_1002 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_1005 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_0954 ABC transporter ATP-binding protein/permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D TPE_1465 ABC transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D TPE_1466 HlyB/MsbA family ABC transporter K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D TPE_0953 ABC transporter ATP-binding protein/permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D TPE_2673 ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:tped02060] D TPE_2568 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D TPE_0411 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D TPE_0440 PTS system transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D TPE_1663 DNA-binding protein/PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:tped03070] D TPE_2346 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D TPE_2345 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D TPE_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D TPE_1527 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D TPE_2625 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TPE_2347 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D TPE_2777 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D TPE_2285 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TPE_1972 sY; signal recognition particle-docking protein sY K03110 ftsY; fused signal recognition particle receptor D TPE_0334 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:tped02020] D TPE_2201 trypsin domain/PDZ K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2799 trypsin domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2046 flagellar filament core protein K02406 fliC; flagellin D TPE_2205 flagellar filament core protein K02406 fliC; flagellin D TPE_2206 flagellar filament core protein K02406 fliC; flagellin D TPE_0572 fliA; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA D TPE_0607 motA; motility protein A K02556 motA; chemotaxis protein MotA D TPE_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TPE_2042 citC; citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D TPE_2189 citD; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D TPE_1045 Citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D TPE_2190 citE; citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D TPE_1046 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D TPE_2191 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D TPE_1047 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D TPE_2041 citXG protein K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52] D TPE_1890 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D TPE_0246 CCS family citrate carrier protein K11616 maeN; malate:Na+ symporter D TPE_2233 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D TPE_1923 sigma-54 dependent transcriptional regulator K02584 nifA; Nif-specific regulatory protein D TPE_1902 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D TPE_1474 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TPE_0137 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0162 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0896 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein D TPE_0925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0520 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0542 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1382 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0801 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1408 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1165 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1471 methyl-accepting chemotaxis sensory transducerwith Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D TPE_1170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1516 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1561 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1794 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1979 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2149 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2558 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0009 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein D TPE_2047 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1095 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1096 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TPE_1093 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TPE_1473 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TPE_2295 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TPE_2601 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D TPE_0195 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D TPE_1743 putative glycoside hydrolase family protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D TPE_1508 pyridoxal-dependent family decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tped02024] D TPE_0533 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D TPE_0470 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_0666 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2471 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2295 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TPE_2092 oligopeptide ABC transporter substrate-bindingprotein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_0986 solute-binding family 5 protein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_2091 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_0840 oligopeptide/dipeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_2090 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_0839 oligopeptide/dipeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_2089 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_0838 oligopeptide/dipeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_2088 ykfD; oligopeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_0837 oligopeptide/dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_1002 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_1005 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_1515 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2006 oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2139 peptide ABC transporter periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2514 lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0948 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0135 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2517 solute-binding family 5 protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0949 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_0134 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_1514 nickel-transporting ATPase K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2005 oligopeptide transport system permease oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2140 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2513 oligopeptide/dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_0950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_0133 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_1513 binding-protein-dependent transport system innermembrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2004 oligopeptide transport system permease oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2141 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2512 oligopeptide/dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_0951 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_1512 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_0498 oligopeptide/dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2142 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2511 oligopeptide/dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2003 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2510 oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_1511 oligopeptide/dipeptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_0497 oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_2777 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D TPE_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D TPE_1527 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D TPE_2625 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TPE_2347 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D TPE_2285 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TPE_1972 sY; signal recognition particle-docking protein sY K03110 ftsY; fused signal recognition particle receptor D TPE_0334 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tped02030] D TPE_0137 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0162 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0896 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein D TPE_0925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0520 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0542 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1382 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0801 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1408 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1165 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1471 methyl-accepting chemotaxis sensory transducerwith Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D TPE_1170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1516 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1561 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1794 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1979 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2149 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2558 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0009 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein D TPE_0247 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein D TPE_1096 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TPE_2047 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1095 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1093 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TPE_1094 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D TPE_1473 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TPE_1474 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TPE_2106 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D TPE_2792 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D TPE_0604 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TPE_0603 fliY; bifunctional chemotaxis protein CheC/flagellarmotor switch protein FliY K02417 fliN; flagellar motor switch protein FliN D TPE_0607 motA; motility protein A K02556 motA; chemotaxis protein MotA D TPE_0606 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tped02040] D TPE_2108 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D TPE_2107 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D TPE_2106 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D TPE_2792 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D TPE_2105 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D TPE_2104 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TPE_2103 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D TPE_0605 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D TPE_1673 flagellar protein FliL-like protein K02415 fliL; flagellar protein FliL D TPE_0604 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TPE_0603 fliY; bifunctional chemotaxis protein CheC/flagellarmotor switch protein FliY K02417 fliN; flagellar motor switch protein FliN D TPE_0602 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TPE_0601 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TPE_1119 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D TPE_1120 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D TPE_1122 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TPE_1121 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TPE_2110 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D TPE_2109 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D TPE_0610 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D TPE_0609 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D TPE_2254 flgG-1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D TPE_2793 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D TPE_2794 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ D TPE_0553 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D TPE_0554 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D TPE_2046 flagellar filament core protein K02406 fliC; flagellin D TPE_2205 flagellar filament core protein K02406 fliC; flagellin D TPE_2206 flagellar filament core protein K02406 fliC; flagellin D TPE_2208 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2 D TPE_0852 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D TPE_0607 motA; motility protein A K02556 motA; chemotaxis protein MotA D TPE_0606 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D TPE_0176 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D TPE_1781 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D TPE_0543 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D TPE_1902 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D TPE_0572 fliA; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tped01501] D TPE_2101 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TPE_0736 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TPE_2092 oligopeptide ABC transporter substrate-bindingprotein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_0986 solute-binding family 5 protein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_2091 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_0840 oligopeptide/dipeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_2090 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_0839 oligopeptide/dipeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_2089 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_0838 oligopeptide/dipeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_2088 ykfD; oligopeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_0837 oligopeptide/dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_0413 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D TPE_2231 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TPE_1788 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TPE_0168 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tped01502] D TPE_1653 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TPE_2538 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TPE_2122 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D TPE_0969 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TPE_2401 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tped01503] D TPE_1419 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TPE_2201 trypsin domain/PDZ K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2799 trypsin domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2774 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TPE_0413 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tped01000] C 01001 Protein kinases [BR:tped01001] D TPE_1096 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tped01009] D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:tped01002] D TPE_2296 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D TPE_0316 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D TPE_0404 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TPE_1543 glutamine amidotransferase class I K07010 K07010; putative glutamine amidotransferase D TPE_1002 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_1005 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_2470 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC D TPE_1985 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TPE_1773 glmS; glucosamine--fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TPE_0525 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D TPE_1835 CAAX amino terminal protease K07052 K07052; CAAX protease family protein D TPE_1048 hypothetical protein K07052 K07052; CAAX protease family protein D TPE_1072 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TPE_0403 M16 family peptidase K06972 PITRM1; presequence protease [EC:3.4.24.-] D TPE_0593 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D TPE_0594 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D TPE_0707 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TPE_0035 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TPE_1878 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D TPE_1481 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D TPE_2591 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D TPE_1651 peptidase, M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D TPE_0456 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D TPE_2656 sH; cell division protein sH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D TPE_1889 peptidase M42 family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-] D TPE_2150 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D TPE_2201 trypsin domain/PDZ K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2799 trypsin domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2515 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D TPE_0822 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D TPE_0746 ptrB; protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D TPE_0006 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D TPE_0368 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D TPE_2266 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D TPE_1088 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D TPE_2580 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D TPE_0976 Peptidase S24/S26A/S26B, conserved region K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_0167 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_1857 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TPE_1211 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D TPE_1680 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D TPE_1052 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D TPE_2289 rhomboid K07059 K07059; rhomboid family protein D TPE_2112 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D TPE_2322 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D TPE_1022 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D TPE_2187 TldD/PmbA K03568 tldD; TldD protein D TPE_2584 alpha-2-macroglobulin domain-containing protein K06894 yfhM; alpha-2-macroglobulin D TPE_2039 hflC protein K04087 hflC; modulator of FtsH protease HflC D TPE_2040 hflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:tped01003] D TPE_2097 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D TPE_2579 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TPE_2231 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TPE_1678 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tped01005] D TPE_0568 glycosyl transferase, group 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tped01011] D TPE_2333 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TPE_2795 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TPE_1658 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D TPE_1057 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TPE_0889 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TPE_1653 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TPE_2538 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TPE_1957 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D TPE_0969 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TPE_2401 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D TPE_0813 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TPE_0021 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D TPE_2231 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TPE_2579 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TPE_1788 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TPE_0168 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TPE_0006 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D TPE_0368 Beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TPE_2222 Slt family transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D TPE_2507 Slt family transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D TPE_1545 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D TPE_2540 RlpA family lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D TPE_1419 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tped01004] D TPE_2031 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TPE_2032 fabH; 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D TPE_2029 fabF; 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D TPE_2030 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TPE_1820 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TPE_2028 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D TPE_0985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TPE_0470 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_0666 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2471 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_1689 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tped01008] D TPE_1804 putative aspartate/glutamate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:tped01006] D TPE_2153 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D TPE_0027 miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TPE_0748 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TPE_1243 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:tped01007] D TPE_1959 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TPE_0762 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TPE_2354 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TPE_2235 tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TPE_0772 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TPE_0588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TPE_0766 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TPE_0792 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TPE_0419 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TPE_1560 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TPE_2034 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TPE_0005 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TPE_1482 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TPE_0732 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TPE_1755 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TPE_2086 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TPE_0461 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TPE_2260 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TPE_0672 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TPE_0480 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TPE_1410 glycoside hydrolase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TPE_1885 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D TPE_1090 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D TPE_0186 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D TPE_0191 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tped03000] D TPE_0406 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D TPE_2693 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D TPE_1556 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D TPE_2803 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D TPE_2295 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TPE_2377 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D TPE_0138 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D TPE_0519 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D TPE_2753 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D TPE_0797 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D TPE_2023 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D TPE_1923 sigma-54 dependent transcriptional regulator K02584 nifA; Nif-specific regulatory protein D TPE_1897 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D TPE_0993 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D TPE_0332 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D TPE_0667 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TPE_1032 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TPE_1909 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D TPE_2193 C4 zinc finger K06204 dksA; RNA polymerase-binding transcription factor D TPE_2057 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D TPE_2125 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tped03021] D TPE_1182 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D TPE_2621 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TPE_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TPE_0449 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TPE_0028 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D TPE_0176 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D TPE_1781 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D TPE_0543 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D TPE_0771 RNA polymerase sigma-24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D TPE_1902 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D TPE_0572 fliA; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA D TPE_2461 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D TPE_2258 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D TPE_0443 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D TPE_2559 NusG family transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D TPE_1494 sigma factor regulatory protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D TPE_1495 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D TPE_0740 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D TPE_2193 C4 zinc finger K06204 dksA; RNA polymerase-binding transcription factor D TPE_1544 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tped03019] D TPE_2350 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TPE_1140 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D TPE_2131 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TPE_0387 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_2806 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TPE_0960 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D TPE_1544 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D TPE_2769 pfk; diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D TPE_2015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TPE_2318 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TPE_2523 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D TPE_2233 csrA; carbon storage regulator K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:tped03011] D TPE_1924 cytidylate kinase K02945 RP-S1; small subunit ribosomal protein S1 D TPE_2156 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D TPE_2638 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D TPE_0173 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D TPE_2628 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D TPE_1447 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D TPE_2469 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D TPE_2631 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D TPE_0272 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D TPE_2644 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D TPE_2622 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D TPE_2468 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D TPE_2623 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D TPE_0961 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D TPE_2567 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D TPE_2635 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D TPE_1445 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D TPE_1423 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D TPE_1880 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D TPE_0445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D TPE_2640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D TPE_2643 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D TPE_2642 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D TPE_2632 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D TPE_2630 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D TPE_1444 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D TPE_0446 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D TPE_0444 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D TPE_0447 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D TPE_0273 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D TPE_2634 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D TPE_2626 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D TPE_2637 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D TPE_2620 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D TPE_2629 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D TPE_2563 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D TPE_2543 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D TPE_0425 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D TPE_2641 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D TPE_2633 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D TPE_0427 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D TPE_2606 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D TPE_2636 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D TPE_2627 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D TPE_2367 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D TPE_2348 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D TPE_2780 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D TPE_2542 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D TPE_1534 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D TPE_5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TPE_5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TPE_16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TPE_23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tped03009] D TPE_2350 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TPE_1894 NOL1\NOP2\sun family protein K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] D TPE_1887 era; GTP-binding protein Era K03595 era; GTPase D TPE_0428 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D TPE_2193 C4 zinc finger K06204 dksA; RNA polymerase-binding transcription factor D TPE_2461 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D TPE_2258 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D TPE_0443 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D TPE_2559 NusG family transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D TPE_1206 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D TPE_1662 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D TPE_1990 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D TPE_1679 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D TPE_1183 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D TPE_1188 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D TPE_2124 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D TPE_0831 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D TPE_1733 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D TPE_1747 sJ; cell division protein sJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D TPE_1879 putative RNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D TPE_0598 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D TPE_1896 rRNA (guanine-N(2)-)-methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D TPE_0522 methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D TPE_1901 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D TPE_2298 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D TPE_0036 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D TPE_2441 RNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D TPE_1660 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D TPE_1895 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D TPE_1187 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D TPE_0423 RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D TPE_2565 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D TPE_0979 tRNA modifying protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D TPE_2131 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TPE_1956 yjeQ; GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TPE_2608 GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TPE_2570 engA; GTP-binding protein EngA K03977 engA; GTPase D TPE_0824 GTP-binding protein HflX, truncation K03665 hflX; GTPase D TPE_1916 Sua5/YciO/YrdC/YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TPE_2463 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D TPE_2460 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP D TPE_1826 iojap family protein K09710 ybeB; ribosome-associated protein D TPE_1831 metalloprotease K07042 ybeY; probable rRNA maturation factor D TPE_1053 ychF; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:tped03016] D TPE_2791 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D TPE_1431 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D TPE_0764 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D TPE_0762 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TPE_2086 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TPE_0792 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TPE_1560 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TPE_0766 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TPE_0588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TPE_2034 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TPE_2260 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TPE_0005 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TPE_0732 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TPE_0461 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TPE_1755 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TPE_0772 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TPE_0419 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TPE_1482 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TPE_0672 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TPE_0480 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TPE_2354 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TPE_2235 tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TPE_0154 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D TPE_1076 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D TPE_2464 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D TPE_0490 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TPE_1916 Sua5/YciO/YrdC/YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TPE_0027 miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TPE_0748 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TPE_0974 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D TPE_0817 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D TPE_0932 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TPE_2583 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TPE_2779 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D TPE_1949 RNB-like protein K01147 rnb; exoribonuclease II [EC:3.1.13.1] D TPE_1741 ChvD family ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D TPE_1959 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TPE_1410 glycoside hydrolase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TPE_0751 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D TPE_0559 NifR3 family TIM-barrel protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D TPE_2310 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D TPE_0226 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D TPE_2382 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D TPE_2564 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D TPE_0423 RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D TPE_0506 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D TPE_2500 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D TPE_0902 PP-loop domain-containing protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D TPE_0930 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TPE_0787 queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D TPE_0166 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D TPE_1440 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D TPE_0534 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TPE_0177 PP-loop family ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D TPE_2212 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D TPE_1099 gcp; DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D TPE_2211 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D TPE_0968 HesA/MoeB/ThiF K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D TPE_0960 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tped03012] D TPE_2462 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D TPE_2541 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D TPE_1997 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D TPE_2155 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D TPE_2645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D TPE_0630 fusA-1; elongation factor G K02355 fusA; elongation factor G D TPE_1536 fusA-2; elongation factor G K02355 fusA; elongation factor G D TPE_1984 translation elongation factor G K02355 fusA; elongation factor G D TPE_2192 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D TPE_1529 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D TPE_2154 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D TPE_1530 HemK family modification methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D TPE_2268 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D TPE_2194 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D TPE_1834 efp; translation elongation factor P K02356 efp; elongation factor P D TPE_0416 tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D TPE_1975 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:tped03110] D TPE_0163 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D TPE_1073 clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D TPE_1965 AAA ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D TPE_1087 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D TPE_2111 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D TPE_2015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TPE_2318 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TPE_2013 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D TPE_2195 DnaJ protein K03686 dnaJ; molecular chaperone DnaJ D TPE_0785 heat shock protein 34 K04083 hslO; molecular chaperone Hsp33 D TPE_2016 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE D TPE_1460 Hsp20/alpha crystallin K13993 HSP20; HSP20 family protein D TPE_0174 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D TPE_2201 trypsin domain/PDZ K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2799 trypsin domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D TPE_2656 sH; cell division protein sH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D TPE_0565 hypothetical protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D TPE_2774 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TPE_0172 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D TPE_1233 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D TPE_0582 thioredoxin, selenocysteine-containing K03671 TXN; thioredoxin D TPE_1228 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:tped04131] D TPE_1250 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_1249 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_0072 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_1803 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TPE_0438 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2734 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2270 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:tped03051] D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:tped03032] D TPE_0532 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D TPE_0406 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D TPE_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D TPE_2739 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D TPE_1780 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0894 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TPE_0776 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TPE_0964 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TPE_2215 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TPE_0539 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_2587 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_1942 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TPE_0648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D TPE_0265 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D TPE_2808 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D TPE_1144 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TPE_2771 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TPE_2114 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tped03036] D TPE_0406 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D TPE_2350 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D TPE_0924 neutrophil-activating protein A K04047 dps; starvation-inducible DNA-binding protein D TPE_1567 chromosome partition protein SmC K03529 smc; chromosome segregation protein D TPE_0038 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D TPE_0037 transcriptional regulator K06024 scpB; segregation and condensation protein B D TPE_2119 sA; cell division protein sA K03590 ftsA; cell division protein FtsA D TPE_0168 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TPE_0812 sK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D TPE_2123 cell division protein sL K03586 ftsL; cell division protein FtsL D TPE_2120 cell division protein sQ K03589 ftsQ; cell division protein FtsQ D TPE_2121 cell cycle protein sW K03588 ftsW; cell division protein FtsW D TPE_2118 sZ; cell division protein sZ K03531 ftsZ; cell division protein FtsZ D TPE_1419 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TPE_0413 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D TPE_1785 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TPE_1786 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D TPE_1787 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D TPE_1789 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D TPE_1033 ParA family ATPase K03496 parA; chromosome partitioning protein D TPE_0667 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TPE_1032 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TPE_1144 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TPE_2771 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TPE_0817 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D TPE_1188 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D TPE_2113 phage integrase family site specific recombinase K03733 xerC; integrase/recombinase XerC D TPE_2117 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D TPE_0298 Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D TPE_1310 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D TPE_0664 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tped03400] D TPE_0743 methylated-DNA--protein-cysteinemethyltransferase 1 K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D TPE_2450 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D TPE_0811 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TPE_1182 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D TPE_1103 dut; deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TPE_2352 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TPE_2590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TPE_1778 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TPE_1881 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TPE_1752 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TPE_1928 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D TPE_2366 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D TPE_0453 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D TPE_1981 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_2339 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TPE_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TPE_0449 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TPE_2621 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TPE_0028 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D TPE_2372 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D TPE_0346 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D TPE_1486 MutS family DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D TPE_1850 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D TPE_0241 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D TPE_1849 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D TPE_0894 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TPE_0776 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TPE_0964 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TPE_2215 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TPE_0539 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_2587 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D TPE_0408 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D TPE_1118 recA; recombinase A K03553 recA; recombination protein RecA D TPE_0400 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D TPE_1962 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D TPE_0401 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D TPE_2351 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D TPE_1200 nuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50 D TPE_1199 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D TPE_2334 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D TPE_0777 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D TPE_0834 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TPE_2667 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TPE_2721 recR; recombination protein RecR K06187 recR; recombination protein RecR D TPE_1932 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D TPE_0689 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D TPE_1509 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D TPE_0265 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D TPE_2808 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D TPE_2114 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D TPE_0387 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_2806 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TPE_0910 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D TPE_0271 recX; recombination regulator RecX K03565 recX; regulatory protein D TPE_1690 ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D TPE_0488 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TPE_0578 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D TPE_2315 DHH super, subfamily 1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tped03029] D TPE_2462 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D TPE_2541 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D TPE_2155 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D TPE_2645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D TPE_0630 fusA-1; elongation factor G K02355 fusA; elongation factor G D TPE_1536 fusA-2; elongation factor G K02355 fusA; elongation factor G D TPE_1984 translation elongation factor G K02355 fusA; elongation factor G D TPE_1887 era; GTP-binding protein Era K03595 era; GTPase D TPE_2354 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TPE_1560 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TPE_2034 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TPE_0732 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TPE_0588 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TPE_1216 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D TPE_2488 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D TPE_1894 NOL1\NOP2\sun family protein K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] D TPE_0942 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TPE_1446 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D TPE_0344 surface antigen K07277 SAM50; outer membrane protein insertion porin family D TPE_2015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TPE_2016 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE D TPE_2318 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TPE_0174 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D TPE_2013 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D TPE_2195 DnaJ protein K03686 dnaJ; molecular chaperone DnaJ D TPE_0490 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TPE_2777 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tped02000] D TPE_0478 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0696 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0861 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_1391 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_1993 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_2404 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D TPE_0474 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0695 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0881 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_1392 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_2394 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_2405 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D TPE_0363 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_1435 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_1436 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_0364 multidrug ABC transport system ATP-binding andpermease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D TPE_0287 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2324 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_1028 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2381 ABC transporter ATP-binding protein/peptidase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2457 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2458 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_1065 ABC transporter ATP-binding protein/peptidase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2050 mdlB12; ABC-type multidrug/protein/lipid transportsystem, ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_0805 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_1137 ABC transporter ATP-binding protein/peptidase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_0286 subtilin transport ATP-binding protein SpaT K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2502 subtilin transport ATP-binding protein SpaT K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_2618 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_1024 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TPE_1002 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_1005 bacteriocin ABC transporter ATP-binding/permease K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D TPE_0954 ABC transporter ATP-binding protein/permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D TPE_1465 ABC transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D TPE_1466 HlyB/MsbA family ABC transporter K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D TPE_0953 ABC transporter ATP-binding protein/permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D TPE_2673 ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D TPE_0256 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0933 nitrate/sulfonate/bicarbonate ABC transporterperiplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D TPE_0254 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0935 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D TPE_0255 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_0936 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D TPE_0248 ABC transporter periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D TPE_0614 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D TPE_0251 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D TPE_0615 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D TPE_0250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TPE_0616 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TPE_0301 thiamine ABC transporter thiamine-binding protein K02064 thiB; thiamine transport system substrate-binding protein D TPE_0302 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D TPE_0303 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D TPE_0913 putative sulfonate/nitrate transport systemsubstrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D TPE_0912 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D TPE_0923 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D TPE_2455 ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D TPE_2451 family 1 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D TPE_2453 binding-protein-dependent transport system innermembrane protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TPE_2454 binding-protein-dependent transport system innermembrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TPE_0247 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein D TPE_2605 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D TPE_0244 mglA; galactoside ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D TPE_1411 membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D TPE_1413 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D TPE_1414 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D TPE_1412 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D TPE_1058 lipoprotein K23510 rfuA; riboflavin transport system substrate-binding protein D TPE_1060 branched-chain amino acid ABC transporter permease K23511 rfuC; riboflavin transport system permease protein D TPE_1061 branched-chain amino acid ABC transporter permease K23512 rfuD; riboflavin transport system permease protein D TPE_1059 ABC transporter ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein D TPE_2362 extracellular solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D TPE_2478 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D TPE_2479 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D TPE_2480 monosaccharide-transporting ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D TPE_1955 lipoprotein K02044 phnD; phosphonate transport system substrate-binding protein D TPE_1501 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D TPE_1502 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D TPE_1500 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D TPE_0548 amino acid ABC transporter amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TPE_0549 amino acid ABC transporter amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TPE_2092 oligopeptide ABC transporter substrate-bindingprotein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_0986 solute-binding family 5 protein K15580 oppA; oligopeptide transport system substrate-binding protein D TPE_2091 oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_0840 oligopeptide/dipeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D TPE_2090 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_0839 oligopeptide/dipeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D TPE_2089 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_0838 oligopeptide/dipeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D TPE_2088 ykfD; oligopeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_0837 oligopeptide/dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D TPE_2552 nickel ABC transporter periplasmicnickel-binding protein K15584 nikA; nickel transport system substrate-binding protein D TPE_2551 nikA; nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein D TPE_2550 nickel transporter permease NikC K15586 nikC; nickel transport system permease protein D TPE_2549 nikC; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D TPE_2548 nikE; nickel transporter ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D TPE_1515 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2006 oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2139 peptide ABC transporter periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2514 lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0948 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0135 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_2517 solute-binding family 5 protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TPE_0949 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_0134 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_1514 nickel-transporting ATPase K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2005 oligopeptide transport system permease oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2140 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_2513 oligopeptide/dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D TPE_0950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_0133 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_1513 binding-protein-dependent transport system innermembrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2004 oligopeptide transport system permease oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2141 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_2512 oligopeptide/dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TPE_0951 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_1512 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_0498 oligopeptide/dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2142 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2511 oligopeptide/dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2003 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D TPE_2510 oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_1511 oligopeptide/dipeptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_0497 oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TPE_0496 oligopeptide/dipeptide ABC transporter peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0499 oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0500 oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D TPE_0502 ABC transporter permease K13894 yejB; microcin C transport system permease protein D TPE_0501 oligopeptide/dipeptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D TPE_2704 ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein D TPE_2703 fhuB; ferrichrome transport system permease FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein D TPE_2702 transport system permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein D TPE_2701 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D TPE_1650 iron compound ABC transporter periplasmic iron compound-binding protein K25113 htsA; heme transport system substrate-binding protein D TPE_0067 iron compound ABC transporter periplasmic iron compound-binding protein K25113 htsA; heme transport system substrate-binding protein D TPE_1649 iron compound ABC transporter permease K25114 htsB; heme transport system permease protein D TPE_0066 iron compound ABC transporter permease K25114 htsB; heme transport system permease protein D TPE_1648 iron compound ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5] D TPE_0289 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TPE_0864 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TPE_1469 iron chelate uptake ABC transportersolute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TPE_0048 iron compound ABC transporter periplasmic iron compound-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TPE_2610 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TPE_0288 transport system permease K02015 ABC.FEV.P; iron complex transport system permease protein D TPE_0867 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D TPE_1468 transport system permease K02015 ABC.FEV.P; iron complex transport system permease protein D TPE_0049 iron compound ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D TPE_2612 transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D TPE_0050 iron compound ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TPE_2611 fecE; hemin transport system ATP-binding protein fecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TPE_0866 iron compound ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TPE_1467 iron compound ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TPE_1162 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TPE_1145 iron compound ABC transporter periplasmic iron compound-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D TPE_1146 iron compound ABC transporter permease K25027 btuC; cobalamin transport system permease protein D TPE_1147 iron compound ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D TPE_1665 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D TPE_0624 cation ABC transporter permease K09816 znuB; zinc transport system permease protein D TPE_0623 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D TPE_2757 troA; zinc ABC transporter periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D TPE_2755 troC; zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D TPE_2754 troD; zinc ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D TPE_2756 troB; zinc ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D TPE_2329 cobalt transporter K02008 cbiQ; cobalt/nickel transport system permease protein D TPE_2312 cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D TPE_2330 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D TPE_0382 hypothetical protein K10094 cbiK; nickel transport protein D TPE_2313 hypothetical protein K16915 cbiL; nickel transport protein D TPE_0309 BioY protein K03523 bioY; biotin transport system substrate-specific component D TPE_0307 hypothetical protein K16783 bioN; biotin transport system permease protein D TPE_0308 polyamine-transporting ATPase K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D TPE_0451 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D TPE_0475 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D TPE_0697 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D TPE_1996 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D TPE_1406 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D TPE_0699 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein D TPE_1404 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D TPE_1995 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D TPE_0476 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D TPE_0477 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D TPE_0698 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D TPE_1405 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D TPE_1994 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D TPE_0018 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D TPE_0019 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D TPE_1477 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D TPE_0360 ABC superfamily ATP binding cassettetransporter, membrane protein K25151 gldF; gliding motility-associated transport system permease protein D TPE_0359 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D TPE_0361 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D TPE_2576 hypothetical protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein D TPE_0788 hypothetical protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein D TPE_2577 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D TPE_0789 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D TPE_2578 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D TPE_0790 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D TPE_1968 lipoprotein releasing system, permease K09808 lolC_E; lipoprotein-releasing system permease protein D TPE_1970 lipoprotein releasing system, permease K09808 lolC_E; lipoprotein-releasing system permease protein D TPE_1969 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D TPE_2342 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein D TPE_0679 ABC transporter K25154 evrC; viologen exporter family transport system permease protein D TPE_0373 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein D TPE_0374 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein D TPE_0677 ABC transporter K25155 evrB; viologen exporter family transport system permease protein D TPE_2343 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein D TPE_0678 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein D TPE_2344 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein D TPE_0375 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein D TPE_0989 bacitracin ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_0899 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_0900 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_1558 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_2056 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_1805 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D TPE_0990 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_0898 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_1869 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_1557 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_1806 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_2054 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_0536 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TPE_0415 permease K02004 ABC.CD.P; putative ABC transport system permease protein D TPE_0937 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D TPE_1912 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D TPE_0414 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TPE_0938 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TPE_1914 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TPE_1553 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D TPE_2186 sodium:sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D TPE_0597 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_0073 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_1198 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_2731 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_2571 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_1084 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_1682 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump D TPE_1739 major facilitator superfamily protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D TPE_2568 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D TPE_0411 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D TPE_0440 PTS system transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D TPE_1663 DNA-binding protein/PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D TPE_1016 potassium channel protein K10716 kch; voltage-gated potassium channel D TPE_2745 batB protein K07114 yfbK; Ca-activated chloride channel homolog D TPE_2746 batA protein K07114 yfbK; Ca-activated chloride channel homolog D TPE_0775 formate/nitrite transporter K21993 fdhC; formate transporter D TPE_0716 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D TPE_0607 motA; motility protein A K02556 motA; chemotaxis protein MotA D TPE_0606 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D TPE_0493 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TPE_0494 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TPE_0344 surface antigen K07277 SAM50; outer membrane protein insertion porin family D TPE_1476 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D TPE_1832 tlyC; hemolysin C K06189 corC; hemolysin (HlyC) family protein D TPE_1091 hypothetical protein K16210 togT; oligogalacturonide transporter D TPE_1428 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D TPE_1988 Na+/H+ antiporter K07084 yuiF; putative amino acid transporter D TPE_1251 L-lactate transport K03303 lutP; lactate permease D TPE_0064 opuD1; choline/carnitine/betaine transporter OpuD1 K05020 opuD; glycine betaine transporter D TPE_0473 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D TPE_0022 transporter K03312 gltS; glutamate:Na+ symporter, ESS family D TPE_0324 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D TPE_2532 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D TPE_0264 TrkA family protein K03499 trkA; trk/ktr system potassium uptake protein D TPE_0323 trkA; potassium transporter peripheral membrane protein K03499 trkA; trk/ktr system potassium uptake protein D TPE_2533 TrkA-N domain-containing protein K03499 trkA; trk/ktr system potassium uptake protein D TPE_0971 uraA; uracil transporter K02824 uraA; uracil permease D TPE_0040 putative xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D TPE_1454 xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease D TPE_1774 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family D TPE_1827 chromate transporter K07240 chrA; chromate transporter D TPE_1828 chromate transporter K07240 chrA; chromate transporter D TPE_1539 Na/Pi cotransporter K03324 yjbB; phosphate:Na+ symporter D TPE_1250 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_1249 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TPE_0021 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D TPE_2274 hypothetical protein K09125 yhhQ; queuosine precursor transporter D TPE_2121 cell cycle protein sW K03588 ftsW; cell division protein FtsW D TPE_0799 nicO; putative NiCoT family nickel (Ni2+)-cobalt(Co2+) transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D TPE_0820 vacuolar-type H(+)-translocatingpyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D TPE_1044 Na+ transporting oxaloacetate decarboxylasesubunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TPE_1041 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D TPE_1043 oadB; biotin/lipoyl attachment domain-containingprotein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TPE_1042 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D TPE_0413 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D TPE_0377 FeoA K04758 feoA; ferrous iron transport protein A D TPE_0378 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A D TPE_0379 feoB; ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D TPE_2575 magnesium transport family protein MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:tped02044] D TPE_1918 hypothetical protein K08086 fimV; pilus assembly protein FimV D TPE_0885 hypothetical protein K02221 yggT; YggT family protein D TPE_2099 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D TPE_2529 Late competence development protein ComFB K02241 comFB; competence protein ComFB D TPE_1122 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TPE_1121 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TPE_1181 protein FlhB K04061 flhB2; flagellar biosynthesis protein D TPE_2107 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D TPE_2105 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D TPE_2104 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TPE_0603 fliY; bifunctional chemotaxis protein CheC/flagellarmotor switch protein FliY K02417 fliN; flagellar motor switch protein FliN D TPE_0602 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TPE_0601 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TPE_1119 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D TPE_1120 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D TPE_2285 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TPE_2346 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D TPE_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D TPE_2345 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D TPE_1527 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D TPE_2625 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TPE_0334 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TPE_1972 sY; signal recognition particle-docking protein sY K03110 ftsY; fused signal recognition particle receptor D TPE_2347 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D TPE_2777 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:tped02042] D TPE_0927 hypothetical protein K11041 eta; exfoliative toxin A/B D TPE_0493 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TPE_0494 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TPE_1231 hlyIII; hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:tped02022] D TPE_0270 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D TPE_1096 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TPE_1093 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TPE_1473 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] C 02035 Bacterial motility proteins [BR:tped02035] D TPE_1096 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TPE_2047 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1095 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TPE_1094 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D TPE_1474 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TPE_1473 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TPE_1093 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TPE_0137 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0162 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0896 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein D TPE_0925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0520 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0542 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1035 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1382 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0801 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1408 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1165 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1471 methyl-accepting chemotaxis sensory transducerwith Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D TPE_1170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1516 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1561 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1794 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_1979 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2149 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2558 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TPE_0009 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein D TPE_2105 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D TPE_2104 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TPE_2103 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D TPE_0602 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TPE_0601 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TPE_1119 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D TPE_1120 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D TPE_1122 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TPE_1121 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TPE_2106 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D TPE_2792 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D TPE_0604 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TPE_0603 fliY; bifunctional chemotaxis protein CheC/flagellarmotor switch protein FliY K02417 fliN; flagellar motor switch protein FliN D TPE_2107 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D TPE_0605 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D TPE_1673 flagellar protein FliL-like protein K02415 fliL; flagellar protein FliL D TPE_2108 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D TPE_2110 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D TPE_2109 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D TPE_0610 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D TPE_2254 flgG-1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D TPE_2793 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D TPE_2794 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ D TPE_0609 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D TPE_0553 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D TPE_0554 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D TPE_2046 flagellar filament core protein K02406 fliC; flagellin D TPE_2205 flagellar filament core protein K02406 fliC; flagellin D TPE_2206 flagellar filament core protein K02406 fliC; flagellin D TPE_2208 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2 D TPE_0852 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D TPE_0572 fliA; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA D TPE_0607 motA; motility protein A K02556 motA; chemotaxis protein MotA D TPE_0606 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D TPE_2232 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D TPE_2207 flagellin FlaG K06603 flaG; flagellar protein FlaG D TPE_2038 hypothetical protein K02383 flbB; flagellar protein FlbB D TPE_0608 flagellar protein-like protein K02385 flbD; flagellar protein FlbD D TPE_0569 flhF; flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D TPE_0146 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG D TPE_0570 fleN; flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tped04812] D TPE_1753 hypothetical protein K06990 MEMO1; MEMO1 family protein D TPE_1785 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TPE_2118 sZ; cell division protein sZ K03531 ftsZ; cell division protein FtsZ D TPE_2119 sA; cell division protein sA K03590 ftsA; cell division protein FtsA D TPE_1033 ParA family ATPase K03496 parA; chromosome partitioning protein D TPE_0667 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TPE_1032 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tped04147] D TPE_0540 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D TPE_0841 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TPE_0252 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TPE_1803 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TPE_1417 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TPE_2270 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TPE_2774 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TPE_2589 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D TPE_2318 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TPE_2015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TPE_0663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TPE_0313 guaB; inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TPE_2645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D TPE_0470 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_0666 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2471 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TPE_2355 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TPE_1800 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D TPE_0662 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_1674 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D TPE_2255 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D TPE_1813 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TPE_1433 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TPE_2727 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TPE_0438 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D TPE_2734 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:tped02048] D TPE_0689 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D TPE_0688 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D TPE_1977 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D TPE_0690 csn1; Csn1 family CRISPR-associated protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D TPE_0702 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D TPE_0701 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TPE_2695 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TPE_0648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D TPE_0997 restriction enzyme methylase subunit K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D TPE_0647 adenine-specific DNA-methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D TPE_0171 adenine-specific DNA modification methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D TPE_0406 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D TPE_0331 RelE/StbE family addiction module toxin K06218 relE; mRNA interferase RelE/StbE D TPE_0332 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D TPE_0878 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D TPE_0845 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J D TPE_0847 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J D TPE_0877 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J D TPE_0846 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D TPE_0844 yoeB; toxin of the YoeB-YefM toxin-antitoxin system K19158 yoeB; toxin YoeB [EC:3.1.-.-] D TPE_1852 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D TPE_1851 prevent-host-death family protein K19159 yefM; antitoxin YefM D TPE_2767 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D TPE_2766 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D TPE_2118 sZ; cell division protein sZ K03531 ftsZ; cell division protein FtsZ D TPE_1785 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TPE_1144 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TPE_2771 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TPE_0762 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TPE_0490 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:tped01504] D TPE_2673 ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D TPE_0739 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TPE_0413 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tped03100] D TPE_tRNA26Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA33Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA6Ala tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TPE_tRNA44Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA40Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA9Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA16Arg tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TPE_tRNA21Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TPE_tRNA18Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TPE_tRNA3Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TPE_tRNA4Gln tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TPE_tRNA10Pseudo tRNA-OTHER K14223 tRNA-Gln; tRNA Gln D TPE_tRNA5Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TPE_tRNA17Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TPE_tRNA12Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA37Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA28Gly tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TPE_tRNA43His tRNA-His K14226 tRNA-His; tRNA His D TPE_tRNA7Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TPE_tRNA27Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA24Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA22Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA36Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA35Leu tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TPE_tRNA31Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TPE_tRNA20Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TPE_tRNA34Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA23Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA15Met tRNA-Met K14230 tRNA-Met; tRNA Met D TPE_tRNA11Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TPE_tRNA19Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA8Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA25Pro tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TPE_tRNA41Pseudo tRNA-OTHER K14233 tRNA-Ser; tRNA Ser D TPE_tRNA42Ser tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TPE_tRNA39Pseudo tRNA-OTHER K14233 tRNA-Ser; tRNA Ser D TPE_tRNA38Ser tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TPE_tRNA1Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA14Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA29Thr tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TPE_tRNA2Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TPE_tRNA30Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TPE_tRNA13Val tRNA-Val K14237 tRNA-Val; tRNA Val D TPE_tRNA45Val tRNA-Val K14237 tRNA-Val; tRNA Val D TPE_tRNA32SeCp tRNA-Sec K14238 tRNA-Sec; tRNA Sec D TPE_16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TPE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TPE_23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TPE_5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TPE_5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D TPE_1115 iron-sulfur cluster-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D TPE_1241 electron transfer flavoprotein-quinoneoxidoreductase ydiS K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D TPE_2230 msrA; bifunctional methionine sulfoxide reductase A/B K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D TPE_0917 ferredoxin-like protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D TPE_2309 Fe-hydrogenase K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D TPE_0071 desulfoferrodoxin/neelaredoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D TPE_0821 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D TPE_1107 ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D TPE_1230 glycine/sarcosine/betaine reductase complex protein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D TPE_1229 grdA; glycine/sarcosine/betaine reductase complex protein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D TPE_2134 grdE-2; glycine reductase complex proprotein GrdE2 K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2] D TPE_0061 betaine reductase complex component B subunitgamma K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D TPE_2132 grdB-2; glycine reductase complex selenoprotein GrdB2 K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D TPE_0159 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D TPE_2133 glycine reductase complex selenoprotein GrdB2 K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D TPE_0349 grdD; glycine reductase complex protein GrdD K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4] D TPE_0348 grdC; glycine reductase complex protein GrdC K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4] D TPE_0161 sarcosine reductase complex component B subunitalpha K21583 grdG; sarcosine reductase complex component B subunit alpha [EC:1.21.4.3] D TPE_0160 sarcosine reductase complex component B subunitalpha K21584 grdF; sarcosine reductase complex component B subunit beta [EC:1.21.4.3] D TPE_0063 glycine reductase complex proprotein K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4] D TPE_0062 betaine reductase complex component B subunitgamma K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4] D TPE_1817 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D TPE_1459 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D TPE_0008 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D TPE_1646 oxygen-independent coproporphyrinogen III oxidase K21936 chuW; anaerobilin synthase [EC:2.1.1.342] D TPE_0636 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D TPE_1675 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D TPE_1425 cutE-1; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D TPE_0943 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D TPE_0148 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D TPE_2297 ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D TPE_0717 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182] D TPE_2199 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D TPE_2292 putative glycerophosphotransferase K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D TPE_0410 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D TPE_1966 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D TPE_0784 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D TPE_2535 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D TPE_2269 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D TPE_1830 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D TPE_0152 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TPE_0558 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TPE_2581 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TPE_1728 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D TPE_2733 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D TPE_0197 ptmE; LmbE-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D TPE_0422 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D TPE_2647 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TPE_0589 methanol dehydrogenase regulatory protein MoxR K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TPE_1655 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D TPE_1023 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D TPE_0826 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D TPE_0433 hgdC; (R)-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D TPE_1172 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D TPE_1171 nqrA; Na(+)-translocating NADH-quinone reductase, A subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D TPE_1886 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D TPE_2376 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D TPE_1246 (Fe-S)-binding protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D TPE_1173 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D TPE_1174 nqrD; electron transport complex protein RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D TPE_1175 nqrE; Na(+)-translocating NADH-quinone reductase, E subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D TPE_0458 NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins D TPE_1223 metallo-beta-lactamase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D TPE_0563 flavodoxin K03839 fldA; flavodoxin I D TPE_2393 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH D TPE_1240 ferredoxin like protein K03855 fixX; ferredoxin like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D TPE_0398 alanine racemase K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D TPE_2246 mtrF; efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D TPE_1888 tex protein K06959 tex; protein Tex C 99974 Translation D TPE_1734 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D TPE_0164 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D TPE_1967 UVR protein K19411 mcsA; protein arginine kinase activator D TPE_1089 tig; trigger factor K03545 tig; trigger factor D TPE_1856 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D TPE_2244 magnesium chelatase K07391 comM; magnesium chelatase family protein D TPE_1236 hypothetical protein K07397 yhfA; putative redox protein C 99976 Replication and repair D TPE_2387 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D TPE_1179 hypothetical protein K07460 yraN; putative endonuclease D TPE_2115 DNA processing protein DprA K04096 smf; DNA processing protein D TPE_1552 recombination factor protein RarA K07478 ycaJ; putative ATPase D TPE_1367 ISTde2, transposase K07482 K07482; transposase, IS30 family C 99979 Viral proteins C 99998 Others D TPE_1762 rhodanese-like protein K03972 pspE; phage shock protein E D TPE_2722 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D TPE_0060 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D TPE_1822 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D TPE_1876 amino acid carrier K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D TPE_0752 agcS; sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D TPE_0223 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D TPE_2776 Jag protein K06346 jag; spoIIIJ-associated protein D TPE_1533 stage V sporulation protein G K06412 spoVG; stage V sporulation protein G D TPE_1691 hypothetical protein K06298 gerM; germination protein M C 99993 Cell motility C 99995 Signaling proteins D TPE_1829 PhoH protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D TPE_1936 LysM/M23/M37 peptidase K12943 ygeR; lipoprotein YgeR C 99994 Others D TPE_1802 hemerythrin-like protein K07216 hr; hemerythrin D TPE_2146 hemerythrin K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D TPE_2586 CvpA K03558 cvpA; membrane protein required for colicin V production D TPE_2319 patatin K07001 K07001; NTE family protein D TPE_0319 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D TPE_2256 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D TPE_1554 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D TPE_1555 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D TPE_2495 LemA K03744 lemA; LemA protein D TPE_0970 hypothetical protein K08974 K08974; putative membrane protein D TPE_0891 hypothetical protein K08986 ycgQ; putative membrane protein D TPE_2494 hypothetical protein K08988 K08988; putative membrane protein C 99997 Function unknown D TPE_0240 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D TPE_0712 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D TPE_0011 hypothetical protein K06872 K06872; uncharacterized protein D TPE_2492 hypothetical protein K06872 K06872; uncharacterized protein D TPE_0182 alpha/beta fold family hydrolase K06889 K06889; uncharacterized protein D TPE_1149 hypothetical protein K06889 K06889; uncharacterized protein D TPE_1214 hypothetical protein K06921 K06921; uncharacterized protein D TPE_1548 hypothetical protein K06940 K06940; uncharacterized protein D TPE_1479 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D TPE_2010 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D TPE_2566 hypothetical protein K06960 K06960; uncharacterized protein D TPE_1893 neutral zinc metallopeptidase K06973 K06973; uncharacterized protein D TPE_0735 acetyltransferase K06976 K06976; uncharacterized protein D TPE_2751 putative RND superfamilyresistance-nodulation-cell division antibiotic:proton (H+) K07003 K07003; uncharacterized protein D TPE_2661 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein D TPE_2413 lactoylglutathione lyase K07032 K07032; uncharacterized protein D TPE_0342 toxin regulator-like protein K07035 K07035; uncharacterized protein D TPE_1463 membrane protein K07035 K07035; uncharacterized protein D TPE_0892 permease K07089 K07089; uncharacterized protein D TPE_0903 transporter K07090 K07090; uncharacterized protein D TPE_1441 phosphoesterase K07095 K07095; uncharacterized protein D TPE_0718 serine/threonine protein phosphatase K07096 K07096; uncharacterized protein D TPE_1940 phosphoribosyl transferase K07101 K07101; uncharacterized protein D TPE_0926 hypothetical protein K07112 K07112; uncharacterized protein D TPE_2674 YeeE/YedE family integral membrane protein K07112 K07112; uncharacterized protein D TPE_0906 hypothetical protein K07118 K07118; uncharacterized protein D TPE_1700 hypothetical protein K07126 K07126; uncharacterized protein D TPE_0187 ATPase K07133 K07133; uncharacterized protein D TPE_2440 hypothetical protein K07133 K07133; uncharacterized protein D TPE_2657 ATP/GTP-binding protein K07133 K07133; uncharacterized protein D TPE_1782 hypothetical protein K07164 K07164; uncharacterized protein D TPE_2778 hypothetical protein K08998 K08998; uncharacterized protein D TPE_1218 hypothetical protein K09005 K09005; uncharacterized protein D TPE_1432 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D TPE_0573 hypothetical protein K09749 K09749; uncharacterized protein D TPE_1077 hypothetical protein K09766 K09766; uncharacterized protein D TPE_2546 hypothetical protein K09768 K09768; uncharacterized protein D TPE_0795 hypothetical protein K09770 K09770; uncharacterized protein D TPE_2442 acid phosphatase/vanadium-dependenthaloperoxidase related protein K09775 K09775; uncharacterized protein D TPE_0829 hypothetical protein K09790 K09790; uncharacterized protein D TPE_2036 hypothetical protein K09795 K09795; uncharacterized protein D TPE_2073 hypothetical protein K09797 K09797; uncharacterized protein D TPE_1100 hypothetical protein K09798 K09798; uncharacterized protein D TPE_1772 lipoprotein K09807 K09807; uncharacterized protein D TPE_0848 lipoprotein K09973 K09973; uncharacterized protein D TPE_0665 hypothetical protein K09975 K09975; uncharacterized protein D TPE_0849 hypothetical protein K01163 K01163; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 24, 2024