+D GENES KO
#
KEGG Orthology (KO) - Treponema putidum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tpk00010]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_02395 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_11255 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_09115 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO40_11875 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO40_10635 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO40_10710 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO40_02070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO40_11800 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_01985 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_00415 racemase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_01255 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_07225 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_12245 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tpk00020]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_11680 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JO40_11675 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JO40_00415 racemase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_01255 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tpk00030]
D JO40_02395 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO40_05115 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO40_10925 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JO40_11520 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JO40_07220 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO40_06560 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_04205 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JO40_04060 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_11255 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tpk00040]
D JO40_11135 hypothetical protein K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D JO40_11140 galactarate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D JO40_09845 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JO40_05115 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO40_06245 hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:tpk00051]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_11255 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D JO40_06245 hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_09115 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO40_07220 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tpk00052]
D JO40_12245 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JO40_00540 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_01695 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_10930 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_12170 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_03580 alpha-amlyase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:tpk00053]
D JO40_09845 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:tpk00500]
D JO40_09795 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D JO40_12800 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JO40_11300 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO40_08460 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JO40_08925 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JO40_03580 alpha-amlyase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JO40_13190 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JO40_05275 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_02395 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tpk00520]
D JO40_05435 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO40_13275 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO40_04230 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_02535 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO40_04975 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO40_09780 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_09845 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JO40_00540 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_01695 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_10930 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO40_02395 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO40_09795 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D JO40_09800 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D JO40_12800 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tpk00620]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_00415 racemase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_01255 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_06940 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO40_03290 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO40_02070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO40_02785 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO40_02770 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO40_02775 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO40_02780 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO40_02165 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO40_07225 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO40_10630 extradiol dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JO40_09140 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JO40_08995 lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JO40_08335 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JO40_11680 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JO40_11675 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JO40_11800 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_01985 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tpk00630]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_01080 glutamate mutase K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D JO40_00630 methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D JO40_01075 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D JO40_11425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO40_06600 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JO40_03455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JO40_11440 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JO40_11435 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JO40_11450 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_11445 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D JO40_05345 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:tpk00640]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_06940 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO40_03290 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_02785 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO40_02770 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO40_02775 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO40_02780 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO40_07225 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:tpk00650]
D JO40_02745 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO40_11210 butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D JO40_00415 racemase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_01255 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_03945 isopropanol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism [PATH:tpk00660]
D JO40_01075 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D JO40_01080 glutamate mutase K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D JO40_00630 methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
C 00562 Inositol phosphate metabolism
D JO40_09115 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tpk00190]
D JO40_10765 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D JO40_10770 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D JO40_10775 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D JO40_09550 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D JO40_10780 ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D JO40_10785 ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tpk00710]
D JO40_10635 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO40_11875 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_10925 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JO40_11520 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JO40_07220 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO40_09115 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO40_05115 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO40_11800 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_01985 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tpk00720]
D JO40_00415 racemase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_01255 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO40_11800 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_01985 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO40_11680 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JO40_11675 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JO40_02785 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO40_02770 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO40_02775 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO40_02780 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO40_05380 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JO40_03865 formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D JO40_03290 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO40_06940 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tpk00680]
D JO40_03455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JO40_11425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_06940 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO40_03290 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_10710 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:tpk00910]
D JO40_05215 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D JO40_01865 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JO40_03620 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JO40_01455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D JO40_11920 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tpk00061]
D JO40_02785 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO40_02770 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO40_02775 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO40_02780 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO40_00615 acyl carrier protein K02078 acpP; acyl carrier protein
D JO40_02715 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO40_02710 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JO40_05240 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO40_02730 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO40_08165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO40_02745 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO40_01410 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_10540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_06995 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tpk00071]
D JO40_01410 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_10540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_06995 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:tpk00074]
D JO40_08795 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JO40_00615 acyl carrier protein K02078 acpP; acyl carrier protein
D JO40_02715 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tpk00561]
D JO40_05345 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO40_08585 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D JO40_08590 hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D JO40_11205 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JO40_09175 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JO40_12795 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JO40_12170 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tpk00564]
D JO40_07685 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JO40_03345 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JO40_09175 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JO40_02155 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JO40_07930 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JO40_00060 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JO40_06690 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JO40_03470 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tpk00600]
D JO40_12170 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tpk00230]
D JO40_05360 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_04205 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JO40_08960 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JO40_12960 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JO40_11235 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JO40_09660 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JO40_12895 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D JO40_12965 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JO40_07355 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JO40_07350 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JO40_11810 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JO40_11240 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JO40_10760 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JO40_04275 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO40_03465 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JO40_07530 purine NTP phosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JO40_10620 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JO40_04135 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO40_04240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO40_12025 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JO40_09200 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO40_06935 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO40_06375 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO40_07890 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JO40_08665 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JO40_01455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tpk00240]
D JO40_04330 pyrB; bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D JO40_01085 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JO40_07970 dihydroorotate dehydrogenase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JO40_07985 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JO40_01100 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JO40_07710 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JO40_00085 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JO40_01765 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JO40_08425 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JO40_00950 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JO40_11405 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JO40_07890 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JO40_01440 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D JO40_12025 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JO40_04135 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO40_04240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO40_01615 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JO40_05125 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JO40_01590 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tpk00250]
D JO40_09155 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JO40_11810 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JO40_04330 pyrB; bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D JO40_03620 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JO40_01865 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JO40_09660 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JO40_08960 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tpk00260]
D JO40_03505 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO40_01655 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO40_03870 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JO40_03455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JO40_11425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO40_05345 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JO40_10710 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO40_01610 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JO40_11440 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JO40_11435 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JO40_11450 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_11445 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D JO40_06215 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D JO40_11760 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JO40_11765 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:tpk00270]
D JO40_10845 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_08935 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_00260 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JO40_05295 5'-nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JO40_07365 methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D JO40_10855 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JO40_00425 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JO40_02145 SAM-dependent methyltransferase K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D JO40_07225 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO40_11760 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JO40_11765 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:tpk00280]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_07980 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:tpk00300]
D JO40_06305 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO40_08180 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
C 00310 Lysine degradation [PATH:tpk00310]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_06300 radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:tpk00220]
D JO40_00900 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JO40_04785 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D JO40_09660 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JO40_01455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JO40_01865 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JO40_06040 hypothetical protein K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
C 00330 Arginine and proline metabolism [PATH:tpk00330]
D JO40_08650 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO40_02975 diamine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JO40_03255 diamine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JO40_09430 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JO40_05580 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JO40_05945 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D JO40_03260 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:tpk00340]
D JO40_02170 histidinol phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JO40_02790 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JO40_07420 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JO40_03860 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JO40_03990 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
D JO40_08670 tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism
D JO40_00515 enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:tpk00380]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_03810 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tpk00400]
D JO40_05290 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JO40_11515 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D JO40_08330 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JO40_10755 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JO40_08735 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JO40_11795 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:tpk00430]
D JO40_03290 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO40_06940 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:tpk00440]
D JO40_09715 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D JO40_09720 phosphoenolpyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D JO40_09725 nucleotidyl transferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:tpk00450]
D JO40_10845 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_08935 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_00425 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JO40_00555 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JO40_06605 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JO40_00225 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO40_07450 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JO40_00310 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D JO40_03455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tpk00470]
D JO40_13180 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO40_09660 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JO40_12190 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JO40_04915 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:tpk00480]
D JO40_04445 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JO40_08235 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JO40_04095 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D JO40_08650 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D JO40_05205 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tpk00542]
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tpk00541]
D JO40_10930 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO40_09845 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JO40_09970 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JO40_09975 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JO40_09795 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D JO40_09800 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D JO40_09780 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:tpk00550]
D JO40_02535 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO40_04975 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO40_04915 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JO40_08180 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JO40_13180 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO40_00065 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JO40_00745 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO40_10530 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO40_08805 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO40_12265 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO40_12090 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO40_07960 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:tpk00552]
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JO40_10025 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JO40_12795 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:tpk00543]
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JO40_12000 alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tpk00730]
D JO40_05285 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO40_06710 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JO40_08780 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JO40_12185 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JO40_08665 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tpk00740]
D JO40_01575 riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JO40_06255 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JO40_05360 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:tpk00750]
D JO40_07380 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JO40_03505 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO40_01655 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO40_04765 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tpk00760]
D JO40_04705 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JO40_04275 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO40_10465 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JO40_09635 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D JO40_10680 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JO40_07500 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JO40_11345 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JO40_00025 NADP oxidoreductase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JO40_00030 NAD(P) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JO40_00035 NADP transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:tpk00770]
D JO40_09515 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JO40_11505 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JO40_08795 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:tpk00780]
D JO40_05240 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO40_02730 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO40_08165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO40_05230 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tpk00785]
D JO40_03390 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_11440 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JO40_11435 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JO40_11450 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JO40_11445 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:tpk00670]
D JO40_05380 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JO40_03865 formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D JO40_03455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JO40_11235 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JO40_11240 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JO40_03990 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D JO40_11535 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JO40_11450 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JO40_01885 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tpk00860]
D JO40_05335 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO40_03440 cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D JO40_03445 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D JO40_02640 cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D JO40_02680 cbiF; cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D JO40_02675 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D JO40_02635 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D JO40_11365 cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D JO40_08515 SAM-dependent methlyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D JO40_08520 precorrin-6Y-methylase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D JO40_02140 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D JO40_03450 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D JO40_04595 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JO40_07795 cobalamin biosynthesis protein CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JO40_13200 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JO40_08495 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D JO40_06810 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D JO40_08490 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D JO40_05820 aspartate aminotransferase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D JO40_06645 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D JO40_06650 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tpk00900]
D JO40_08780 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JO40_00055 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JO40_01665 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JO40_13020 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JO40_01670 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JO40_12975 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JO40_08470 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JO40_00065 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JO40_10925 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tpk00523]
D JO40_09970 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JO40_09975 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D JO40_09975 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tpk00521]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_12320 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_06900 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO40_09970 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JO40_09975 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
C 00525 Acarbose and validamycin biosynthesis [PATH:tpk00525]
D JO40_09970 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JO40_09975 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D JO40_02715 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO40_02730 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:tpk00998]
D JO40_00615 acyl carrier protein K02078 acpP; acyl carrier protein
D JO40_09715 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D JO40_09720 phosphoenolpyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tpk00999]
D JO40_00260 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JO40_11515 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D JO40_02165 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tpk00625]
D JO40_00990 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tpk03020]
D JO40_00755 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO40_00750 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO40_02195 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO40_06360 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D JO40_04795 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tpk03010]
D JO40_07730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JO40_00080 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JO40_02275 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JO40_13125 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JO40_02225 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JO40_10790 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JO40_00395 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JO40_02240 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JO40_02025 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JO40_02310 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JO40_02200 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JO40_00400 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JO40_02205 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JO40_01580 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JO40_06805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JO40_02260 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JO40_10800 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JO40_02285 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JO40_10660 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JO40_01470 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JO40_00775 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JO40_02290 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JO40_02305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JO40_02300 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JO40_02245 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JO40_02235 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JO40_00765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JO40_10805 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JO40_00770 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JO40_00780 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JO40_02020 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JO40_02255 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JO40_02215 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JO40_02270 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JO40_02190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JO40_02230 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JO40_06785 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JO40_08820 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JO40_10445 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JO40_02280 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JO40_02295 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JO40_02250 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JO40_13005 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JO40_10455 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JO40_01895 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JO40_02265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JO40_02220 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JO40_11775 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JO40_00620 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JO40_00800 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JO40_13240 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JO40_08815 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JO40_13430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_13420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO40_02830 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO40_02825 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO40_13415 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tpk00970]
D JO40_05965 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_02490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_02835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_13425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_01510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_13050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_13130 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_04555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_01890 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JO40_02360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JO40_05445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JO40_03320 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO40_13010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO40_03315 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO40_11790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO40_00185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_10830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_11165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_13135 tRNA-His K14226 tRNA-His; tRNA His
D JO40_02330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_06910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_10535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_10835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_12780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_03340 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO40_08195 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO40_08745 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_12255 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_01805 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_10505 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JO40_02355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_10555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_01505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_04550 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO40_04565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO40_11070 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_00805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_11475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_00795 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JO40_11075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JO40_10945 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO40_12215 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO40_05335 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO40_02855 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JO40_02860 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO40_02850 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JO40_10885 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO40_11325 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO40_05415 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO40_08440 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO40_01735 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO40_07450 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JO40_04980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO40_00310 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO40_11535 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JO40_12230 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO40_00040 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO40_03655 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO40_07945 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO40_08265 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO40_09980 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO40_03570 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO40_13025 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO40_02065 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO40_11330 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tpk03060]
D JO40_02210 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO40_00790 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO40_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO40_07325 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO40_07320 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO40_07330 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO40_13225 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO40_11230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO40_07690 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JO40_12840 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO40_11980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_08270 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_12095 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_07280 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tpk04122]
D JO40_05285 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO40_00245 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JO40_07370 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JO40_06710 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tpk03018]
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO40_01585 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO40_01095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO40_06490 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_04860 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_11780 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JO40_04385 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_02595 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO40_08755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO40_10585 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tpk03030]
D JO40_12325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO40_03300 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO40_09250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_02375 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_06170 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO40_04455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO40_10875 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JO40_12300 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_06700 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JO40_11115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
C 03410 Base excision repair [PATH:tpk03410]
D JO40_00910 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JO40_01565 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JO40_10500 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO40_01435 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03420 Nucleotide excision repair [PATH:tpk03420]
D JO40_00690 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JO40_09475 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JO40_07440 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JO40_01495 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_00865 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO40_04795 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:tpk03430]
D JO40_05145 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JO40_00700 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JO40_01495 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_00865 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_00660 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JO40_00695 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JO40_01435 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_03300 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO40_04455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO40_09250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_02375 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_06170 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO40_12325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03440 Homologous recombination [PATH:tpk03440]
D JO40_01435 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_04460 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D JO40_11250 recombinase RecR K06187 recR; recombination protein RecR
D JO40_06850 recombinase RecA K03553 recA; recombination protein RecA
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO40_10080 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JO40_11215 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JO40_10075 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JO40_02340 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_02925 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_06010 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_02755 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_03300 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO40_04455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO40_09250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_02375 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_06170 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO40_12325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO40_01570 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:tpk03250]
D JO40_13210 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tpk02010]
D JO40_03985 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO40_04665 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO40_04955 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO40_04670 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO40_04950 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO40_04675 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO40_03995 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JO40_04005 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D JO40_04365 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO40_04380 sugar ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JO40_04375 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO40_04370 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO40_13170 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D JO40_13160 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO40_13155 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO40_13165 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO40_08280 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO40_12250 phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D JO40_00885 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO40_00890 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO40_08580 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JO40_08555 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JO40_08560 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein
D JO40_08565 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JO40_08570 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JO40_01930 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO40_02545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JO40_01925 hypothetical protein K15581 oppB; oligopeptide transport system permease protein
D JO40_02550 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D JO40_02555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JO40_02560 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_01905 ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_08245 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JO40_06735 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JO40_06740 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JO40_13250 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D JO40_13260 zinc transport system membrane protein TroC K11708 troC; manganese/zinc/iron transport system permease protein
D JO40_13255 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D JO40_00470 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JO40_00575 ABC transporter substrate-binding protein K10094 cbiK; nickel transport protein
D JO40_11555 acetyl-COA carboxylase K03523 bioY; biotin transport system substrate-specific component
D JO40_11550 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JO40_03735 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_07015 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_08135 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_05550 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_09420 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_05700 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_09730 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JO40_09745 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JO40_12820 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D JO40_12830 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JO40_12825 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JO40_01595 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D JO40_01600 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D JO40_02520 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JO40_01860 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_03215 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_03785 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_05620 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_08095 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_08120 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_09400 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_12380 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_01855 ABC transporter permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_03210 multidrug ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_03745 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_08090 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_08125 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_12390 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_00875 ABC transporter permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_00870 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_04215 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_04210 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_00820 peptidase C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JO40_00985 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
C 02060 Phosphotransferase system (PTS) [PATH:tpk02060]
D JO40_06260 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JO40_11020 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JO40_08385 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JO40_06335 PTS sucrose transporter subunit IIABC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tpk03070]
D JO40_07325 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO40_07320 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO40_00790 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO40_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO40_02210 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO40_07330 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO40_13225 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO40_11230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO40_12840 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO40_07690 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tpk02020]
D JO40_01705 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_06945 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_11930 flagellin K02406 fliC; flagellin
D JO40_11935 flagellin K02406 fliC; flagellin
D JO40_07995 flagellin K02406 fliC; flagellin
D JO40_05800 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO40_05870 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO40_06030 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO40_11670 citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D JO40_11490 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D JO40_11485 citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JO40_11480 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D JO40_11665 ACP synthase CitX K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D JO40_08335 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JO40_02440 citrate:sodium symporter K11616 maeN; malate:Na+ symporter
D JO40_00120 carbon storage regulator K03563 csrA; carbon storage regulator
D JO40_07735 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D JO40_08990 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JO40_02505 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO40_04220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_09565 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_05170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00345 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00915 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_06280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_07535 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_11335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11860 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO40_11845 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO40_02500 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO40_07285 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO40_09780 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JO40_08650 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tpk02024]
D JO40_08580 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JO40_08555 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JO40_08560 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein
D JO40_08565 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JO40_08570 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JO40_01410 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_10540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_06995 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_07285 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO40_01930 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO40_02545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JO40_01925 hypothetical protein K15581 oppB; oligopeptide transport system permease protein
D JO40_02550 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D JO40_02555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JO40_02560 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_01905 ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_00820 peptidase C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JO40_00815 hemolysin D K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JO40_05185 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JO40_12210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08350 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08380 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_00195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_03915 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_12930 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08355 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_00200 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_00275 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_03935 peptide transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_08360 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_00205 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_00280 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_03930 peptide transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_08365 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00210 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00285 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_03925 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_12935 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00290 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_12940 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_08370 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_13225 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO40_00790 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO40_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO40_02210 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO40_07330 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO40_11230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO40_12840 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO40_07690 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tpk02030]
D JO40_04220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_09565 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_05170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00345 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00915 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_06280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_07535 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_08280 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO40_11860 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO40_11335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11845 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO40_11850 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JO40_02500 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO40_02505 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO40_11150 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_13300 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_05885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO40_05890 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO40_05870 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO40_05875 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tpk02040]
D JO40_13310 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JO40_13305 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO40_11150 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_13300 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_13295 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO40_13290 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO40_00150 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO40_05880 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO40_05885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO40_05890 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO40_05895 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JO40_05900 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO40_03830 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO40_03825 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JO40_03815 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO40_13320 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JO40_13315 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JO40_05855 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JO40_05860 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JO40_08000 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D JO40_08005 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JO40_08010 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D JO40_00105 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JO40_00110 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JO40_11930 flagellin K02406 fliC; flagellin
D JO40_11935 flagellin K02406 fliC; flagellin
D JO40_07995 flagellin K02406 fliC; flagellin
D JO40_11945 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D JO40_03520 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D JO40_05870 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO40_05875 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO40_06970 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO40_06295 RNA polymerase sigma70 K03086 rpoD; RNA polymerase primary sigma factor
D JO40_12295 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO40_08990 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JO40_05800 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tpk01501]
D JO40_05435 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO40_13275 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO40_01930 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO40_02545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JO40_01925 hypothetical protein K15581 oppB; oligopeptide transport system permease protein
D JO40_02550 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D JO40_02555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JO40_02560 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_01905 ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_10530 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO40_12265 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO40_12090 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tpk01502]
D JO40_13180 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO40_00745 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tpk01503]
D JO40_10640 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JO40_01705 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_06945 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_13210 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tpk01000]
C 01001 Protein kinases [BR:tpk01001]
D JO40_03150 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JO40_03155 HipA-like C-terminal domain/HipA-like N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JO40_11860 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tpk01009]
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:tpk01002]
D JO40_07280 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JO40_04695 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D JO40_10620 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JO40_00820 peptidase C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JO40_06990 glycoside hydrolase K13695 nlpC; probable lipoprotein NlpC
D JO40_08960 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JO40_00720 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D JO40_02365 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JO40_05625 CAAX protease K07052 K07052; CAAX protease family protein
D JO40_02455 CAAX protease K07052 K07052; CAAX protease family protein
D JO40_05675 CAAX protease K07052 K07052; CAAX protease family protein
D JO40_03325 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO40_10070 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-]
D JO40_03430 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JO40_03435 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JO40_04445 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JO40_08950 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JO40_06305 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO40_06585 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D JO40_00880 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JO40_08235 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JO40_11905 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JO40_08870 peptidase M29 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JO40_06035 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JO40_13175 peptidase M42 K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D JO40_00050 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JO40_01705 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_06945 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_13405 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D JO40_07960 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO40_10820 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JO40_13195 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JO40_01200 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JO40_11980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_08270 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_12095 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO40_03260 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JO40_10015 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JO40_04175 signal peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D JO40_05755 glpG protein K07059 K07059; rhomboid family protein
D JO40_13330 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JO40_07595 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JO40_06285 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JO40_12020 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tpk01003]
D JO40_12795 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JO40_11300 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO40_08805 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO40_10530 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO40_10025 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tpk01005]
D JO40_03475 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JO40_09965 UDP-N-acetylglucosamine 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpk01011]
D JO40_02535 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO40_04975 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO40_04915 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JO40_08180 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JO40_13180 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO40_12190 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JO40_00745 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO40_04130 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JO40_10530 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO40_08805 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO40_12265 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO40_12090 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO40_07960 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO40_07490 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JO40_08845 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D JO40_11095 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JO40_12785 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JO40_10640 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tpk01004]
D JO40_02715 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO40_02710 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JO40_05240 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO40_02730 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO40_08165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO40_02745 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO40_05235 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JO40_01410 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_10540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_06995 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_09175 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tpk01006]
D JO40_00065 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JO40_06355 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JO40_12195 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:tpk01007]
D JO40_05335 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO40_02065 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO40_11330 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JO40_04980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO40_07945 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO40_00310 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO40_03655 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO40_12230 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO40_00040 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO40_11325 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO40_09980 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO40_05415 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO40_01735 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO40_08265 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO40_08440 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO40_10885 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO40_03570 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO40_13025 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO40_01610 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JO40_10845 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_08935 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO40_09725 nucleotidyl transferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tpk03000]
D JO40_03905 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JO40_05710 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D JO40_07285 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO40_09555 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JO40_10115 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D JO40_13270 Fur family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JO40_03545 Fur family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JO40_05230 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JO40_01515 ATPase AAA K12146 hyfR; hydrogenase-4 transcriptional activator
D JO40_07735 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D JO40_08775 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D JO40_01415 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JO40_01660 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JO40_07695 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO40_12030 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D JO40_13400 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tpk03021]
D JO40_04795 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JO40_02195 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO40_00755 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO40_00750 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO40_06360 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JO40_06970 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO40_06295 RNA polymerase sigma70 K03086 rpoD; RNA polymerase primary sigma factor
D JO40_12295 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO40_04985 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JO40_00140 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JO40_08990 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JO40_05800 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO40_08640 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JO40_10895 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JO40_06120 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO40_00785 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO40_08690 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D JO40_02575 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D JO40_07695 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO40_11780 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tpk03019]
D JO40_04385 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JO40_01095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO40_06490 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_04860 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO40_01585 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO40_11780 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JO40_06325 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO40_02595 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO40_08755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO40_10585 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JO40_00120 carbon storage regulator K03563 csrA; carbon storage regulator
D JO40_10910 DEAD/DEAH box helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tpk03011]
D JO40_07730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JO40_00080 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JO40_02275 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JO40_13125 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JO40_02225 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JO40_10790 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JO40_00395 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JO40_02240 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JO40_02025 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JO40_02310 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JO40_02200 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JO40_00400 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JO40_02205 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JO40_01580 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JO40_06805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JO40_02260 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JO40_10800 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JO40_02285 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JO40_10660 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JO40_01470 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JO40_00775 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JO40_02290 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JO40_02305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JO40_02300 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JO40_02245 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JO40_02235 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JO40_10805 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JO40_00770 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JO40_00780 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JO40_00765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JO40_02020 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JO40_02255 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JO40_02215 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JO40_02270 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JO40_02190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JO40_02230 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JO40_06785 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JO40_08820 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JO40_10445 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JO40_02280 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JO40_02295 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JO40_02250 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JO40_10455 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JO40_01895 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JO40_02265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JO40_02220 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JO40_11775 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JO40_00620 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JO40_00800 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JO40_13240 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JO40_08815 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JO40_13005 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JO40_02825 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO40_13415 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO40_13430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_13420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO40_02830 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tpk03009]
D JO40_01320 SAM-dependent methlyltransferase K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
D JO40_10350 GTPase Era K03595 era; GTPase
D JO40_10460 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JO40_07695 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO40_08640 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JO40_10895 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JO40_06120 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO40_00785 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO40_02060 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JO40_08390 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JO40_10435 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JO40_04790 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JO40_00995 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JO40_13395 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JO40_05320 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JO40_09265 50S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D JO40_04730 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D JO40_08770 rRNA (guanine-N2)-methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D JO40_02100 SAM-dependent methlyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D JO40_07760 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JO40_07300 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JO40_06835 tRNA synthetase RNA-binding protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JO40_09570 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D JO40_01605 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO40_08400 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO40_08405 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO40_05060 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D JO40_06795 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JO40_07255 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D JO40_01095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO40_12185 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JO40_06265 GTP-binding protein Der K03977 engA; GTPase
D JO40_05970 GTP-binding protein HflX K03665 hflX; GTPase
D JO40_12120 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JO40_08630 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D JO40_08645 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JO40_10475 iojap family protein K09710 ybeB; ribosome-associated protein
D JO40_09090 heat-shock protein K07042 ybeY; probable rRNA maturation factor
D JO40_04170 GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:tpk03016]
D JO40_09365 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JO40_00590 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JO40_08015 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D JO40_05335 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO40_08265 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO40_03655 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO40_00040 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO40_00310 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO40_07945 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO40_11325 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO40_10885 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO40_05415 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO40_08440 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO40_01735 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO40_04980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO40_12230 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO40_09980 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO40_03570 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO40_13025 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO40_02065 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO40_11330 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JO40_08730 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JO40_07510 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JO40_08625 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JO40_05285 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO40_12120 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JO40_06355 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JO40_12195 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JO40_01380 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JO40_01490 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JO40_00225 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO40_13235 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JO40_13435 bacterial RNase P K01978 rnpB; M1 RNA
D JO40_09485 hypothetical protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D JO40_10005 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D JO40_05765 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JO40_05985 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JO40_11265 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JO40_10415 threonylcarbamoyladenosine tRNA methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D JO40_07715 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D JO40_06790 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JO40_05060 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D JO40_03840 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JO40_07370 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JO40_04775 arginosuccinate synthase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D JO40_00245 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JO40_08305 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JO40_01165 recombinase K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D JO40_06505 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JO40_06710 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JO40_13000 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JO40_11965 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JO40_00960 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JO40_11960 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JO40_00740 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D JO40_01585 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO40_04820 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO40_01230 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO40_00500 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tpk03012]
D JO40_08635 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JO40_08810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JO40_09650 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JO40_00075 elongation factor Ts K02357 tsf; elongation factor Ts
D JO40_02315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO40_00390 fusA; elongation factor G K02355 fusA; elongation factor G
D JO40_07005 GTP-binding protein K02355 fusA; elongation factor G
D JO40_04725 fusA; elongation factor G K02355 fusA; elongation factor G
D JO40_01450 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JO40_00070 ribosome recycling factor K02838 frr; ribosome recycling factor
D JO40_01445 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JO40_02525 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JO40_07700 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JO40_07875 elongation factor P K02356 efp; elongation factor P
D JO40_07475 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D JO40_12855 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tpk03110]
D JO40_01180 clpA; Clp protease ClpX K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D JO40_07840 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JO40_12805 Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JO40_10815 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JO40_13325 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D JO40_02595 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO40_08755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO40_02590 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO40_07705 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO40_02135 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D JO40_02600 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D JO40_00605 molecular chaperone Hsp20 K13993 HSP20; HSP20 family protein
D JO40_06965 molecular chaperone GroES K04078 groES; chaperonin GroES
D JO40_01705 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_06945 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D JO40_06035 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JO40_13210 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JO40_11175 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D JO40_06610 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:tpk04131]
D JO40_00255 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_11875 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO40_10710 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO40_02070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:tpk03051]
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tpk03032]
D JO40_06700 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JO40_10665 restriction endonuclease subunit S K05788 ihfB; integration host factor subunit beta
D JO40_06030 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO40_10875 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JO40_12300 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_03300 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO40_04455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO40_06170 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO40_12325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO40_09250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_02375 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_11115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO40_04745 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JO40_06025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JO40_01140 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO40_13340 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tpk03036]
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_10665 restriction endonuclease subunit S K05788 ihfB; integration host factor subunit beta
D JO40_06030 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO40_05370 DNA polymerase III subunit beta K04047 dps; starvation-inducible DNA-binding protein
D JO40_11830 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JO40_06845 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A
D JO40_13365 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JO40_12090 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO40_13390 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D JO40_13370 cell division protein K03589 ftsQ; cell division protein FtsQ
D JO40_13375 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JO40_13360 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO40_10640 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JO40_12280 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO40_12275 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JO40_12270 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JO40_12260 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D JO40_02685 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JO40_01415 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JO40_01140 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO40_01490 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JO40_00995 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JO40_13335 recombinase XerC K03733 xerC; integrase/recombinase XerC
D JO40_13355 recombinase XerD K04763 xerD; integrase/recombinase XerD
D JO40_04640 cell division protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO40_03335 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO40_01195 cell division protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO40_03725 Fic/DOC family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO40_02390 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tpk03400]
D JO40_04535 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JO40_00910 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JO40_04795 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JO40_11370 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JO40_01590 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JO40_01565 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JO40_10500 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JO40_01435 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO40_11500 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO40_00690 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JO40_09475 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JO40_07440 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JO40_01495 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_00865 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO40_00755 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO40_00750 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO40_02195 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO40_06360 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JO40_05145 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JO40_00700 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JO40_00660 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JO40_00695 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JO40_03300 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO40_04455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO40_06170 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO40_12325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO40_09250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_02375 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_03755 endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D JO40_06850 recombinase RecA K03553 recA; recombination protein RecA
D JO40_10080 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JO40_11215 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JO40_10075 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JO40_01570 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JO40_04395 metallophosphatase K03547 sbcD; DNA repair protein SbcD/Mre11
D JO40_01040 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JO40_04460 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D JO40_02340 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_02925 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_06010 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_02755 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO40_11250 recombinase RecR K06187 recR; recombination protein RecR
D JO40_10985 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JO40_04870 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D JO40_12100 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D JO40_04745 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JO40_06025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JO40_13340 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JO40_10665 restriction endonuclease subunit S K05788 ihfB; integration host factor subunit beta
D JO40_06490 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_04860 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO40_07900 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JO40_02030 recombinase RecX K03565 recX; regulatory protein
D JO40_09170 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JO40_01750 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JO40_04135 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO40_04240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO40_11920 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tpk03029]
D JO40_08635 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JO40_08810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JO40_00075 elongation factor Ts K02357 tsf; elongation factor Ts
D JO40_02315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO40_00390 fusA; elongation factor G K02355 fusA; elongation factor G
D JO40_07005 GTP-binding protein K02355 fusA; elongation factor G
D JO40_04725 fusA; elongation factor G K02355 fusA; elongation factor G
D JO40_10350 GTPase Era K03595 era; GTPase
D JO40_02065 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO40_00040 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO40_11325 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO40_05415 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO40_07945 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO40_02855 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JO40_02860 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO40_02850 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JO40_01320 SAM-dependent methlyltransferase K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
D JO40_10795 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_07340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO40_05135 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D JO40_02595 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO40_02600 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D JO40_08755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO40_06965 molecular chaperone GroES K04078 groES; chaperonin GroES
D JO40_02590 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO40_07705 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO40_05285 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO40_13225 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tpk02000]
D JO40_01860 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_03215 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_03785 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_05620 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_08095 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_08120 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_09400 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_12380 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO40_01855 ABC transporter permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_03210 multidrug ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_03745 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_08090 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_08125 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_12390 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO40_00875 ABC transporter permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_00870 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_04215 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_04210 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO40_03280 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_08210 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_08215 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_00320 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_05460 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_05465 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_07585 thiamine ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_06290 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_12330 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_03285 ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO40_00820 peptidase C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JO40_00985 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JO40_03985 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO40_04665 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO40_04955 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO40_04670 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO40_04950 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO40_04675 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO40_03995 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JO40_04005 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D JO40_04585 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JO40_04590 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JO40_04365 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO40_04380 sugar ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JO40_04375 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO40_04370 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO40_08280 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO40_13170 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D JO40_13160 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO40_13155 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO40_13165 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO40_00180 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JO40_07750 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JO40_03600 ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D JO40_03605 ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D JO40_03595 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO40_12250 phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D JO40_00885 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO40_00890 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO40_08580 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JO40_08555 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JO40_08560 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein
D JO40_08565 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JO40_08570 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JO40_07675 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JO40_07680 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JO40_01930 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO40_02545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JO40_01925 hypothetical protein K15581 oppB; oligopeptide transport system permease protein
D JO40_02550 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D JO40_02555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JO40_02560 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_01905 ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D JO40_12210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08350 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08380 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_00195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_03915 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_12930 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO40_08355 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_00200 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_00275 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_03935 peptide transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO40_08360 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_00205 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_00280 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_03930 peptide transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO40_08365 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00210 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00285 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_03925 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_12935 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO40_00290 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_12940 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_08370 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO40_08605 iron ABC transporter substrate-binding protein K25113 htsA; heme transport system substrate-binding protein
D JO40_08600 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D JO40_02630 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JO40_06635 hypothetical protein K25034 btuF; cobalamin transport system substrate-binding protein
D JO40_01070 iron ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D JO40_06630 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D JO40_01065 btuC; corrinoid ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D JO40_01060 iron ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D JO40_08245 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JO40_06735 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JO40_06740 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JO40_13250 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D JO40_13260 zinc transport system membrane protein TroC K11708 troC; manganese/zinc/iron transport system permease protein
D JO40_13255 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D JO40_00470 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JO40_00575 ABC transporter substrate-binding protein K10094 cbiK; nickel transport protein
D JO40_11555 acetyl-COA carboxylase K03523 bioY; biotin transport system substrate-specific component
D JO40_11550 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JO40_09460 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_05705 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_09415 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_05555 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_03730 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_07010 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_08140 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO40_03735 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_07015 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_08135 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_05550 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_09420 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_05700 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO40_05545 cobalt ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO40_05695 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO40_03740 cobalt ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO40_09425 cobalt ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO40_08130 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO40_09730 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JO40_09745 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JO40_01595 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D JO40_01600 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D JO40_02520 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JO40_01120 multidrug ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D JO40_07825 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D JO40_07400 ABC transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D JO40_07820 membrane protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D JO40_07815 antibiotic ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D JO40_07390 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D JO40_12820 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D JO40_12830 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JO40_12825 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JO40_05165 membrane protein K25154 evrC; viologen exporter family transport system permease protein
D JO40_09380 multidrug ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D JO40_03420 membrane protein K25154 evrC; viologen exporter family transport system permease protein
D JO40_05160 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D JO40_09390 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D JO40_09385 multidrug ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D JO40_03410 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D JO40_05155 ABC transporter K25156 evrA; viologen exporter family transport system ATP-binding protein
D JO40_06575 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JO40_01530 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JO40_06580 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JO40_01815 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JO40_03400 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO40_04410 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO40_06570 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO40_10740 3-dehydroquinate dehydratase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO40_01820 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO40_03385 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_07470 ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_06830 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_11695 ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_11710 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_11715 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_10165 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO40_03380 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_11750 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_03010 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_11705 GTPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_10155 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO40_02465 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JO40_08075 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_04735 multidrug transporter MATE K26937 dinF; MATE family, multidrug efflux pump
D JO40_02660 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_06930 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_00340 multidrug transporter K26937 dinF; MATE family, multidrug efflux pump
D JO40_11375 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_07230 multidrug transporter MATE K26937 dinF; MATE family, multidrug efflux pump
D JO40_04250 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_05075 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_01460 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO40_06260 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JO40_11020 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JO40_08385 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JO40_06335 PTS sucrose transporter subunit IIABC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JO40_09055 aerotolerance regulator BatB K07114 yfbK; Ca-activated chloride channel homolog
D JO40_07975 FdhC protein K21993 fdhC; formate transporter
D JO40_00155 mechanosensitive ion channel protein K16053 ybdG; miniconductance mechanosensitive channel
D JO40_06590 magnesium transporter K06213 mgtE; magnesium transporter
D JO40_05870 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO40_05875 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO40_00585 magnesium transporter K03284 corA; magnesium transporter
D JO40_04840 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO40_04845 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO40_04435 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D JO40_05135 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D JO40_02515 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D JO40_09085 hemolysin K06189 corC; hemolysin (HlyC) family protein
D JO40_02415 MFS transporter K16210 togT; oligogalacturonide transporter
D JO40_02160 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D JO40_07025 membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D JO40_11120 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D JO40_04260 transporter K03312 gltS; glutamate:Na+ symporter, ESS family
D JO40_09280 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D JO40_05000 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D JO40_04805 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D JO40_05005 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D JO40_04740 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D JO40_04810 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D JO40_01280 uracil permease K02824 uraA; uracil permease
D JO40_12235 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JO40_01370 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D JO40_10480 chromate transporter K07240 chrA; chromate transporter
D JO40_10485 chromate transporter K07240 chrA; chromate transporter
D JO40_09285 phosphate:sodium symporter K03324 yjbB; phosphate:Na+ symporter
D JO40_04130 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JO40_02005 transporter K09125 yhhQ; queuosine precursor transporter
D JO40_13375 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JO40_11735 iron transporter K07243 FTR; high-affinity iron transporter
D JO40_11730 membrane protein K07230 p19; periplasmic iron binding protein
D JO40_02480 potassium transporter K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D JO40_00815 hemolysin D K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JO40_05185 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JO40_06905 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:tpk02044]
D JO40_12130 hypothetical protein K08086 fimV; pilus assembly protein FimV
D JO40_03305 membrane protein K02221 yggT; YggT family protein
D JO40_01615 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JO40_03815 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO40_01710 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D JO40_13305 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO40_13295 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO40_13290 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO40_05890 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO40_05895 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JO40_05900 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO40_03830 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO40_03825 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JO40_11230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO40_07325 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO40_00790 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO40_07320 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO40_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO40_02210 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO40_07690 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JO40_12840 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO40_07330 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO40_13225 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tpk02042]
D JO40_04840 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO40_04845 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO40_01190 membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tpk02022]
D JO40_11860 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO40_11845 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO40_02500 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:tpk02035]
D JO40_11860 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO40_11335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO40_11850 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JO40_02505 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO40_02500 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO40_11845 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO40_04220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_09565 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_04680 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_05170 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00345 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_00915 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_06280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_07535 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO40_13295 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO40_13290 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO40_05895 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JO40_05900 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO40_03830 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO40_03825 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JO40_03815 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO40_11150 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_13300 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO40_05885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO40_05890 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO40_13305 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO40_00150 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO40_05880 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO40_13310 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JO40_13320 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JO40_13315 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JO40_05855 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JO40_08000 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D JO40_08005 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JO40_08010 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D JO40_05860 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JO40_00105 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JO40_00110 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JO40_11930 flagellin K02406 fliC; flagellin
D JO40_11935 flagellin K02406 fliC; flagellin
D JO40_07995 flagellin K02406 fliC; flagellin
D JO40_11945 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D JO40_03520 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D JO40_05800 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO40_05870 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO40_05875 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO40_00115 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D JO40_11940 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D JO40_12005 flagellar protein FlbB K02383 flbB; flagellar protein FlbB
D JO40_05865 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D JO40_05815 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D JO40_09620 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D JO40_05810 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tpk04812]
D JO40_02090 hypothetical protein K06990 MEMO1; MEMO1 family protein
D JO40_12280 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO40_13360 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO40_13365 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JO40_02685 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JO40_01415 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tpk04147]
D JO40_00855 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D JO40_04140 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO40_01310 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO40_11875 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO40_10635 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO40_02070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO40_13210 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JO40_08950 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JO40_05375 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D JO40_08755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO40_02595 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO40_02395 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO40_03465 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JO40_02315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO40_07225 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO40_01410 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_10540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_06995 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO40_08665 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JO40_10760 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JO40_05205 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D JO40_00540 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_01695 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO40_11205 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JO40_11240 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JO40_11460 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JO40_01865 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JO40_09115 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO40_10710 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tpk02048]
D JO40_04870 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D JO40_12860 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JO40_04875 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JO40_04865 CRISPR-associated protein cas9/csn1, subtype II/nmemi K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D JO40_04880 CRISPR-associated protein Csn2 K19137 csn2; CRISPR-associated protein Csn2
D JO40_06675 deoxyribonuclease HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JO40_07045 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JO40_07060 type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JO40_07050 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JO40_12955 restriction endonuclease DpnI K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D JO40_06090 DNA modification methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JO40_12105 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D JO40_08970 SAM-dependent methyltransferase K24451 zim; modification methylase
D JO40_07200 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JO40_11470 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JO40_07195 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JO40_11465 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JO40_05260 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D JO40_10330 potassium ABC transporter ATPase K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JO40_10325 multidrug transporter MatE K07172 mazE; antitoxin MazE
D JO40_13070 toxin RelE K06218 relE; mRNA interferase RelE/StbE
D JO40_06530 plasmid stabilization protein K06218 relE; mRNA interferase RelE/StbE
D JO40_01035 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D JO40_04490 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JO40_04510 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JO40_05690 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D JO40_09510 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D JO40_01030 addiction module protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D JO40_09505 prevent-host-death protein K19159 yefM; antitoxin YefM
D JO40_03150 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JO40_03155 HipA-like C-terminal domain/HipA-like N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JO40_09315 hypothetical protein K18843 hicB; antitoxin HicB
D JO40_09500 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D JO40_10260 RelE/StbE family addiction module toxin K19092 parE1_3_4; toxin ParE1/3/4
D JO40_07855 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D JO40_04120 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D JO40_04115 DNA-binding protein K21498 higA-1; antitoxin HigA-1
D JO40_04820 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO40_01230 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO40_00500 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO40_04825 VagC K18829 mvpT; antitoxin VapB
D JO40_13360 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO40_12280 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO40_01140 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO40_05335 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO40_05285 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tpk01504]
D JO40_09360 hypothetical protein K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D JO40_05655 aminoglycoside adenylyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D JO40_02570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tpk00537]
D JO40_08950 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tpk03100]
D JO40_05965 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_02490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_02835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_13425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO40_01510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_13050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_13130 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_04555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO40_01890 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JO40_02360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JO40_05445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JO40_03320 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO40_13010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO40_03315 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO40_11790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO40_00185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_10830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_11165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO40_13135 tRNA-His K14226 tRNA-His; tRNA His
D JO40_02330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_06910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_10535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_10835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_12780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO40_03340 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO40_08195 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO40_08745 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_12255 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_01805 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO40_10505 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JO40_02355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_10555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_01505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO40_04550 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO40_04565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO40_11070 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_00805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_11475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO40_00795 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JO40_11075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JO40_10945 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO40_12215 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO40_13430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO40_13420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO40_02830 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO40_02825 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO40_13415 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO40_13435 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JO40_07140 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JO40_11130 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D JO40_06160 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D JO40_09335 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JO40_06105 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D JO40_11355 hydrogenase K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D JO40_10935 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D JO40_06565 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D JO40_03625 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JO40_06620 glycine/sarcosine/betaine reductase complex protein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO40_06615 glycine/sarcosine/betaine reductase complex component A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO40_01160 beta-aspartyl peptidase K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D JO40_06230 hypothetical protein K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO40_01150 glycine reductase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO40_06225 glycine reductase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO40_01155 beta-aspartate methyltransferase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO40_04355 glycine reductase K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO40_04350 glycine reductase K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO40_09000 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO40_10120 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO40_00970 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO40_06975 rRNA (guanine-N2)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JO40_09330 GCN5 family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D JO40_01700 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JO40_01185 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D JO40_07275 thiamine biosynthesis protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JO40_06595 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D JO40_11125 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D JO40_08785 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JO40_05770 hypothetical protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D JO40_07235 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D JO40_11015 aldolase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D JO40_12810 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D JO40_04660 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D JO40_04450 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D JO40_07295 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JO40_09095 metal-dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D JO40_05990 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO40_12775 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO40_07885 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO40_11540 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JO40_07785 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D JO40_02810 magnesium chelatase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JO40_04835 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JO40_09480 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JO40_01955 NADH-quinone reductase K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D JO40_01960 NADH-quinone reductase K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D JO40_10355 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D JO40_09560 zinc ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JO40_01950 NADH-quinone reductase K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D JO40_01945 electron transporter RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D JO40_01940 electron transporter RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D JO40_04430 flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JO40_01795 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JO40_09910 hypothetical protein K07270 K07270; glycosyl transferase, family 25
D JO40_09895 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JO40_00680 Tex-like protein K06959 tex; protein Tex
C 99974 Translation
D JO40_09990 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D JO40_01175 Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JO40_12815 hypothetical protein K19411 mcsA; protein arginine kinase activator
D JO40_10825 trigger factor K03545 tig; trigger factor
D JO40_12305 magnesium chelatase K07391 comM; magnesium chelatase family protein
D JO40_10580 hypothetical protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D JO40_07955 hypothetical protein K03630 radC; DNA repair protein RadC
D JO40_13345 DNA-binding protein K04096 smf; DNA processing protein
D JO40_05395 ATPase AAA K07478 ycaJ; putative ATPase
D JO40_02420 hypothetical protein K07488 K07488; transposase
C 99979 Viral proteins
C 99998 Others
D JO40_11245 DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JO40_10850 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JO40_06250 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JO40_09010 carnitine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JO40_09020 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JO40_10400 branched-chain amino acid ABC transporter substrate-binding protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D JO40_13220 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D JO40_13015 regulatory protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D JO40_09100 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D JO40_07600 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D JO40_00675 hemerythrin K07216 hr; hemerythrin
D JO40_11560 hemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JO40_09245 colicin V production CvpA K03558 cvpA; membrane protein required for colicin V production
D JO40_07925 patatin K07001 K07001; NTE family protein
D JO40_10010 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JO40_05600 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D JO40_01300 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JO40_01680 phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D JO40_02470 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JO40_02475 ABC transporter permease K09015 sufD; Fe-S cluster assembly protein SufD
D JO40_04030 ribonuclease BN K07058 K07058; membrane protein
D JO40_07940 LemA family protein K03744 lemA; LemA protein
D JO40_07865 SanA protein K03748 sanA; SanA protein
D JO40_00125 membrane protein K08974 K08974; putative membrane protein
D JO40_08190 hypothetical protein K08988 K08988; putative membrane protein
C 99997 Function unknown
D JO40_08310 ankyrin K06867 K06867; uncharacterized protein
D JO40_01770 ankyrin K06867 K06867; uncharacterized protein
D JO40_08290 hypothetical protein K06872 K06872; uncharacterized protein
D JO40_07935 hypothetical protein K06872 K06872; uncharacterized protein
D JO40_04630 hypothetical protein K06889 K06889; uncharacterized protein
D JO40_03205 hydrolase K06889 K06889; uncharacterized protein
D JO40_03225 hydrolase K06889 K06889; uncharacterized protein
D JO40_07105 cinnamoyl ester hydrolase K06889 K06889; uncharacterized protein
D JO40_04930 hypothetical protein K06889 K06889; uncharacterized protein
D JO40_03130 ATPase K06921 K06921; uncharacterized protein
D JO40_11080 Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D JO40_04335 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D JO40_06800 RNA-binding protein K06960 K06960; uncharacterized protein
D JO40_01325 peptidase K06973 K06973; uncharacterized protein
D JO40_05430 acetyltransferase K06976 K06976; uncharacterized protein
D JO40_04310 antibiotic transporter K07003 K07003; uncharacterized protein
D JO40_02425 membrane protein K07003 K07003; uncharacterized protein
D JO40_12375 membrane protein K07003 K07003; uncharacterized protein
D JO40_08890 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D JO40_02485 PTS sugar transporter subunit IID K07035 K07035; uncharacterized protein
D JO40_05035 hypothetical protein K07045 K07045; uncharacterized protein
D JO40_10190 DNA polymerase K07075 K07075; uncharacterized protein
D JO40_10305 DNA polymerase K07075 K07075; uncharacterized protein
D JO40_04650 membrane protein K07090 K07090; uncharacterized protein
D JO40_11280 phosphoesterase K07095 K07095; uncharacterized protein
D JO40_01000 serine/threonine protein phosphatase K07096 K07096; uncharacterized protein
D JO40_11105 phosphoribosyl transferase K07101 K07101; uncharacterized protein
D JO40_00250 membrane protein K07112 K07112; uncharacterized protein
D JO40_09645 ATPase K07133 K07133; uncharacterized protein
D JO40_08345 ATPase AAA K07133 K07133; uncharacterized protein
D JO40_12290 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein
D JO40_13230 membrane protein K08998 K08998; uncharacterized protein
D JO40_06320 hypothetical protein K09005 K09005; uncharacterized protein
D JO40_08930 hypothetical protein K09133 K09133; uncharacterized protein
D JO40_07515 membrane protein K09766 K09766; uncharacterized protein
D JO40_08835 hypothetical protein K09768 K09768; uncharacterized protein
D JO40_03555 hypothetical protein K09770 K09770; uncharacterized protein
D JO40_09575 phosphatidic acid phosphatase K09775 K09775; uncharacterized protein
D JO40_00410 membrane protein K09790 K09790; uncharacterized protein
D JO40_05935 hypothetical protein K09803 K09803; uncharacterized protein
D JO40_13460 hypothetical protein K09803 K09803; uncharacterized protein
D JO40_07630 hypothetical protein K09803 K09803; uncharacterized protein
D JO40_10130 hypothetical protein K09803 K09803; uncharacterized protein
D JO40_11430 HrgA protein K09805 K09805; uncharacterized protein
D JO40_11310 hypothetical protein K09807 K09807; uncharacterized protein
D JO40_06980 hypothetical protein K09973 K09973; uncharacterized protein
D JO40_02385 hypothetical protein K09975 K09975; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 23, 2024