+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Truepera radiovictrix
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ACRISPR-Cas system
B Universal Cas proteins
C Trad_0429 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Trad_2305 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Trad_1672 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Trad_0428 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
C Trad_1673 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
C Trad_2304 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Trad_2312 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Trad_1659 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Trad_0432 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D Trad_1661 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Trad_1662 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Trad_1660 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Trad_0432 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
D Trad_2310 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Trad_2309 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D Trad_2308 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Trad_2307 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD
D Trad_2306 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
D Trad_1663 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Trad_1447 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Trad_1448 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Trad_1664 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Trad_1449 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3
D Trad_1665 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3
D Trad_1666 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Trad_1450 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Trad_1451 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Trad_1667 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Trad_1668 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Trad_1452 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Trad_0637 type I restriction-modification system methyltransferase subunit-like protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type III R-M system
B Type IV R-M system
C Trad_1508 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Trad_0999 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Trad_0998 conserved hypothetical protein K26989 mazE9; antitoxin MazE9
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D Trad_2110 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D Trad_2656 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D Trad_0423 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
D Trad_1431 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Trad_0928 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Trad_1432 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
D Trad_0837 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D Trad_2820 conserved hypothetical protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Trad_1611 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Trad_0317 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023