+D GENES KO #

  KEGG Orthology (KO) - Thermocrinis ruber

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:trd00010] D THERU_00250 phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D THERU_06875 fructose-1 6-bisphosphatase K01622 fbp; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D THERU_03185 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D THERU_02560 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D THERU_02805 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D THERU_07030 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D THERU_00075 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D THERU_05300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00020 Citrate cycle (TCA cycle) [PATH:trd00020] D THERU_05280 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D THERU_08440 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_06690 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D THERU_02575 sucC; malate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D THERU_07135 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D THERU_03435 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_05445 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D THERU_07945 pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:trd00030] D THERU_00250 phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D THERU_06015 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D THERU_06020 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D THERU_06010 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D THERU_00510 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D THERU_07515 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D THERU_06930 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D THERU_03680 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D THERU_03445 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D THERU_03105 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D THERU_06875 fructose-1 6-bisphosphatase K01622 fbp; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D THERU_03185 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] C 00040 Pentose and glucuronate interconversions [PATH:trd00040] D THERU_02450 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D THERU_07770 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D THERU_00510 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D THERU_05810 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:trd00051] D THERU_00250 phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D THERU_05810 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D THERU_06875 fructose-1 6-bisphosphatase K01622 fbp; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D THERU_03185 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D THERU_02560 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D THERU_03680 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:trd00052] D THERU_00585 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D THERU_07770 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] C 00053 Ascorbate and aldarate metabolism [PATH:trd00053] D THERU_02450 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D THERU_00590 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:trd00500] D THERU_07770 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D THERU_00955 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D THERU_01880 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D THERU_01000 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D THERU_07405 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D THERU_00250 phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00620 Pyruvate metabolism [PATH:trd00620] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_04300 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D THERU_07955 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D THERU_02815 acetyl-CoA carboxylase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D THERU_07150 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D THERU_05340 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D THERU_07180 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D THERU_07120 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D THERU_05445 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D THERU_07945 pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_07135 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D THERU_03435 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D THERU_05300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D THERU_02720 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D THERU_08045 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:trd00630] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_05280 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D THERU_03980 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D THERU_01750 oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D THERU_00490 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D THERU_02065 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D THERU_07100 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D THERU_04560 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_00195 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_00210 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02070 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02605 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_07485 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02630 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D THERU_02635 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D THERU_02625 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D THERU_02620 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:trd00640] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_04300 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D THERU_07955 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D THERU_02815 acetyl-CoA carboxylase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D THERU_07150 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D THERU_02575 sucC; malate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D THERU_06690 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D THERU_05280 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:trd00650] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_02845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D THERU_03265 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:trd00660] D THERU_02845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D THERU_03265 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D THERU_02575 sucC; malate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D THERU_06690 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D THERU_05665 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D THERU_07085 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D THERU_00710 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:trd00562] D THERU_06240 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D THERU_06370 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D THERU_02560 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00566 Sulfoquinovose metabolism [PATH:trd00566] D THERU_00700 aldehyde dehydrogenase K28635 E1.2.1.97; 3-sulfolactaldehyde dehydrogenase [EC:1.2.1.97] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:trd00190] D THERU_02500 potassium transporter Kef K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D THERU_03015 potassium transporter Kef K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D THERU_05460 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D THERU_02495 NADH-quinone oxidoreductase subunit C K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D THERU_05455 NADH-quinone oxidoreductase subunit C K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D THERU_02320 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D THERU_02325 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D THERU_04590 2-hydroxyacid dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D THERU_02490 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D THERU_05450 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D THERU_02485 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D THERU_02530 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D THERU_02480 2-hydroxyacid dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D THERU_02525 2-hydroxyacid dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D THERU_02475 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D THERU_02520 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D THERU_02470 2-hydroxyacid dehydrogenase K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D THERU_02515 2-hydroxyacid dehydrogenase K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D THERU_02465 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D THERU_02510 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D THERU_02460 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D THERU_02505 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D THERU_06695 (2Fe-2S)-binding protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D THERU_06700 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D THERU_06705 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D THERU_03280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D THERU_00830 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D THERU_05605 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D THERU_00815 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D THERU_02090 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D THERU_05620 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D THERU_00820 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D THERU_02085 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D THERU_05615 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D THERU_03285 heme transporter CcmB K02259 COX15; heme a synthase [EC:1.17.99.9] D THERU_06170 cytochrome C K08738 CYC; cytochrome c D THERU_06400 cytochrome C' K08738 CYC; cytochrome c D THERU_05560 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D THERU_03565 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D THERU_03605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D THERU_03665 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D THERU_01685 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D THERU_00890 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D THERU_03670 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D THERU_03675 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D THERU_00895 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D THERU_07225 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:trd00710] D THERU_07030 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D THERU_02805 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D THERU_07515 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D THERU_03680 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D THERU_02560 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D THERU_00510 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D THERU_06930 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:trd00720] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_05300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D THERU_05445 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D THERU_07945 pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_07135 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D THERU_03435 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D THERU_07395 succinate dehydrogenase K18556 frdA; NADH-dependent fumarate reductase subunit A [EC:1.3.1.6] D THERU_04095 fumarate reductase K18557 frdB; NADH-dependent fumarate reductase subunit B [EC:1.3.1.6] D THERU_02640 fumarate reductase K18558 frdC; NADH-dependent fumarate reductase subunit C D THERU_02775 NADH oxidase K18559 frdD; NADH-dependent fumarate reductase subunit D D THERU_08365 dimethylsulfoxide reductase K18560 frdE; NADH-dependent fumarate reductase subunit E D THERU_06690 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D THERU_02575 sucC; malate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D THERU_08440 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D THERU_05280 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D THERU_06630 succinate--CoA ligase K15232 ccsA; citryl-CoA synthetase large subunit [EC:6.2.1.18] D THERU_06635 succinyl-CoA synthetase subsunit alpha K15233 ccsB; citryl-CoA synthetase small subunit D THERU_02245 citrate synthase K15234 ccl; citryl-CoA lyase [EC:4.1.3.34] D THERU_04300 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D THERU_07955 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D THERU_02815 acetyl-CoA carboxylase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D THERU_07150 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D THERU_05650 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D THERU_06595 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:trd00680] D THERU_02630 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D THERU_02635 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D THERU_02625 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D THERU_02620 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_06875 fructose-1 6-bisphosphatase K01622 fbp; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D THERU_03185 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_05300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D THERU_00075 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D THERU_01635 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D THERU_01060 phosphoserine phosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D THERU_06360 phosphoglycerate kinase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:trd00910] D THERU_04655 nitrate ABC transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D THERU_04660 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D THERU_04665 sulfate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D THERU_04670 nitrate reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2] D THERU_02735 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_07185 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D THERU_06125 acetyltransferase K28956 E4.2.1.1; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:trd00920] D THERU_04970 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D THERU_00875 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D THERU_06660 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D THERU_06645 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D THERU_06640 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D THERU_04710 hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D THERU_04705 Sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D THERU_04720 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D THERU_04715 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D THERU_04700 sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D THERU_06175 sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:trd00061] D THERU_04300 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D THERU_07955 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D THERU_02815 acetyl-CoA carboxylase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D THERU_07150 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D THERU_06150 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D THERU_01090 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D THERU_07830 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D THERU_06145 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D THERU_03355 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D THERU_02790 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D THERU_03180 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:trd00074] D THERU_03755 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D THERU_06150 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D THERU_01090 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:trd00561] D THERU_07825 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D THERU_00120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D THERU_00595 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:trd00564] D THERU_05235 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D THERU_02205 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D THERU_00120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D THERU_00595 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D THERU_00840 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D THERU_06895 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D THERU_05685 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D THERU_02150 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D THERU_04165 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:trd00230] D THERU_03105 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D THERU_04755 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D THERU_05480 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D THERU_01590 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D THERU_06970 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D THERU_01830 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D THERU_01825 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D THERU_00295 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D THERU_07400 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D THERU_02555 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D THERU_01605 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D THERU_05375 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D THERU_01820 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D THERU_03270 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D THERU_03820 polyphenol oxidoreductase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D THERU_06915 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D THERU_01380 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D THERU_03660 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D THERU_08000 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D THERU_03700 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D THERU_01160 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D THERU_00030 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D THERU_05215 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D THERU_00350 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D THERU_03330 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D THERU_03350 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D THERU_01500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D THERU_02255 nucleoside triphosphatase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D THERU_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D THERU_02710 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D THERU_04970 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:trd00240] D THERU_00970 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_05880 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_06445 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D THERU_07530 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D THERU_06115 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D THERU_07900 diguanylate cyclase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D THERU_06810 dihydroorotate dehydrogenase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D THERU_07080 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D THERU_02885 orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D THERU_01900 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D THERU_03660 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D THERU_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D THERU_04280 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D THERU_02840 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D THERU_00555 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D THERU_03270 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D THERU_03350 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D THERU_05540 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D THERU_00030 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D THERU_00950 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D THERU_01360 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D THERU_02120 thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:trd00250] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_01665 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D THERU_04020 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D THERU_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D THERU_03745 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D THERU_03330 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D THERU_05375 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D THERU_07530 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D THERU_07185 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_00970 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_05880 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_06445 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D THERU_01825 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D THERU_04755 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:trd00260] D THERU_03235 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D THERU_07895 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D THERU_00515 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D THERU_02125 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D THERU_00685 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D THERU_05895 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D THERU_00075 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D THERU_01635 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D THERU_01060 phosphoserine phosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D THERU_06360 phosphoglycerate kinase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D THERU_02065 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D THERU_07100 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D THERU_04560 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_00195 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_00210 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02070 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02605 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_07485 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_05420 tryptophan synthase susbunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D THERU_01210 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D THERU_05090 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:trd00270] D THERU_06830 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D THERU_00525 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_04740 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_07470 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D THERU_05400 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D THERU_03820 polyphenol oxidoreductase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D THERU_07210 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D THERU_00785 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D THERU_04090 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D THERU_03705 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D THERU_03235 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D THERU_07895 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D THERU_00515 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D THERU_02125 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D THERU_07815 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_05285 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D THERU_02455 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D THERU_01635 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:trd00280] D THERU_07815 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_05485 6-phosphogluconate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:trd00290] D THERU_05665 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D THERU_07085 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D THERU_00710 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D THERU_02845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D THERU_03265 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D THERU_03030 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D THERU_01875 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D THERU_07815 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D THERU_02720 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D THERU_08045 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:trd00300] D THERU_00515 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D THERU_03235 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D THERU_07895 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D THERU_05410 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D THERU_02190 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D THERU_02750 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D THERU_02765 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D THERU_02265 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D THERU_07655 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D THERU_00800 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D THERU_07835 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:trd00310] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_04775 hypothetical protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:trd00220] D THERU_03065 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D THERU_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D THERU_03745 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D THERU_01825 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_00970 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_05880 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D THERU_06445 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_02430 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D THERU_02995 ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D THERU_08025 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D THERU_06260 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D THERU_02750 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:trd00330] D THERU_01170 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D THERU_05400 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D THERU_07470 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D THERU_03815 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D THERU_02665 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D THERU_01225 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:trd00340] D THERU_01655 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D THERU_04295 histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D THERU_07885 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D THERU_05985 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D THERU_07915 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D THERU_05185 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D THERU_03010 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D THERU_08110 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:trd00350] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:trd00360] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:trd00400] D THERU_03185 fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D THERU_02290 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D THERU_03210 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D THERU_05975 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D THERU_08345 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D THERU_06050 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D THERU_04530 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D THERU_01290 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D THERU_00040 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D THERU_07790 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D THERU_03575 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D THERU_03840 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D THERU_05420 tryptophan synthase susbunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D THERU_01210 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D THERU_05090 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D THERU_00665 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D THERU_00020 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:trd00410] D THERU_00310 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D THERU_01785 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:trd00450] D THERU_06830 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D THERU_00330 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D THERU_05175 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D THERU_04970 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D THERU_02590 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D THERU_01065 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:trd00470] D THERU_02740 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D THERU_06205 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D THERU_01825 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D THERU_06405 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D THERU_06245 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D THERU_02765 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D THERU_07655 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:trd00480] D THERU_00130 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D THERU_08440 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D THERU_06010 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D THERU_06015 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D THERU_01170 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D THERU_05400 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:trd00520] D THERU_05800 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D THERU_08020 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D THERU_06200 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D THERU_00250 phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D THERU_00590 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D THERU_07770 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D THERU_02450 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D THERU_00585 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] C 00541 Biosynthesis of various nucleotide sugars [PATH:trd00541] D THERU_05800 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D THERU_04060 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D THERU_07220 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D THERU_04760 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D THERU_04185 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D THERU_05495 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D THERU_01010 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D THERU_02535 bifunctional protein RfaE, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D THERU_00960 glycerol-3-phosphate cytidylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D THERU_00915 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D THERU_07770 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D THERU_02450 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D THERU_01765 epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:trd00540] D THERU_02650 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D THERU_03195 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D THERU_07115 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D THERU_02820 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D THERU_03315 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D THERU_02110 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D THERU_07205 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D THERU_07195 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:trd00550] D THERU_08020 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D THERU_06200 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D THERU_05245 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D THERU_06245 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D THERU_00800 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D THERU_06205 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D THERU_07835 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D THERU_00835 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D THERU_01840 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D THERU_08340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D THERU_06335 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D THERU_06120 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D THERU_07200 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_02965 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_01175 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D THERU_06450 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:trd00552] D THERU_01840 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:trd00730] D THERU_05095 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D THERU_05380 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D THERU_05500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D THERU_01070 reverse gyrase K03153 thiO; glycine oxidase [EC:1.4.3.19] D THERU_00535 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D THERU_08120 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D THERU_02055 thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D THERU_05595 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D THERU_01810 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D THERU_02255 nucleoside triphosphatase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D THERU_01500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:trd00740] D THERU_08475 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D THERU_03470 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D THERU_03020 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D THERU_01780 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D THERU_06805 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D THERU_01730 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D THERU_06005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:trd00750] D THERU_06940 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D THERU_07460 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D THERU_00685 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D THERU_05895 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:trd00760] D THERU_01665 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D THERU_05795 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D THERU_00995 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D THERU_03750 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D THERU_03270 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D THERU_07925 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D THERU_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D THERU_05415 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D THERU_02645 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D THERU_02280 pyrazinamidase/nicotinamidase pxnc K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D THERU_04605 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D THERU_01015 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:trd00770] D THERU_02845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D THERU_03265 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D THERU_03030 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D THERU_01875 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D THERU_04495 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D THERU_01785 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D THERU_02955 transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D THERU_01630 pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D THERU_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D THERU_07480 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D THERU_05820 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D THERU_03755 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D THERU_07815 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D THERU_00310 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:trd00780] D THERU_07980 biofilm PGA synthesis protein PgaA K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D THERU_06145 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D THERU_03355 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D THERU_02790 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D THERU_03180 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D THERU_07985 biofilm PGA synthesis protein PgaA K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D THERU_03735 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14] D THERU_06845 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D THERU_06110 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D THERU_06455 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D THERU_06325 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D THERU_03825 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:trd00785] D THERU_06330 lipoate--protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D THERU_00675 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8] D THERU_00215 radical SAM protein K09711 lipS1; lipoyl synthase D THERU_05995 radical SAM protein K24689 lipS2; lipoyl synthase D THERU_01310 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D THERU_05680 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_02065 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D THERU_07100 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D THERU_04560 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D THERU_00195 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_00210 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02070 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02605 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_07485 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:trd00790] D THERU_07510 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D THERU_06080 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D THERU_08465 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D THERU_08165 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D THERU_07580 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D THERU_08475 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D THERU_08310 chloride transporter K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D THERU_05545 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D THERU_00315 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D THERU_03290 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D THERU_08235 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D THERU_07630 dehydrogenase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D THERU_01125 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D THERU_03630 queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D THERU_06960 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D THERU_01315 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D THERU_06070 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D THERU_07645 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D THERU_02850 molybdopterin synthase K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D THERU_03225 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D THERU_05660 molybdenum cofactor biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D THERU_06725 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:trd00670] D THERU_05650 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D THERU_01590 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D THERU_01820 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D THERU_04560 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D THERU_02120 thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D THERU_06595 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D THERU_08200 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D THERU_00525 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_04740 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_03705 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D THERU_02065 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D THERU_07100 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_00195 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_00210 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02070 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_02605 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D THERU_07485 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:trd00860] D THERU_08005 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D THERU_01140 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D THERU_02570 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D THERU_02295 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D THERU_03200 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D THERU_04675 uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D THERU_08070 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D THERU_02340 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D THERU_08125 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D THERU_03625 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D THERU_05980 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D THERU_04680 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D THERU_04975 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D THERU_08130 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D THERU_03280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D THERU_03285 heme transporter CcmB K02259 COX15; heme a synthase [EC:1.17.99.9] D THERU_01005 ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:trd00130] D THERU_02180 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D THERU_04750 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D THERU_06005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D THERU_07160 methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D THERU_07795 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D THERU_02910 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D THERU_02950 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D THERU_06075 ABC transporter substrate-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D THERU_07680 flavodoxin K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:trd00900] D THERU_00535 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D THERU_08305 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D THERU_02660 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D THERU_03095 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D THERU_02755 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D THERU_07025 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D THERU_00045 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D THERU_06005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D THERU_08350 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D THERU_05515 octoprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D THERU_00835 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D THERU_07515 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D THERU_01765 epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D THERU_01765 epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:trd00332] D THERU_02665 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D THERU_01225 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:trd00261] D THERU_04970 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D THERU_03235 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D THERU_07895 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D THERU_05410 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D THERU_02190 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:trd00521] D THERU_06370 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D THERU_06240 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D THERU_01765 epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D THERU_01765 epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:trd00401] D THERU_00020 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D THERU_01290 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D THERU_00040 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D THERU_01090 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D THERU_03355 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D THERU_03180 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00975 Biosynthesis of various siderophores C 00998 Biosynthesis of various antibiotics D THERU_06150 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:trd00999] D THERU_00525 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_04740 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D THERU_05975 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation [PATH:trd00627] D THERU_05340 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D THERU_06005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:trd00364] D THERU_00400 carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:trd00361] D THERU_00400 carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:trd00623] D THERU_00400 carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:trd00633] D THERU_04855 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D THERU_04850 Uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D THERU_04895 Ni/Fe hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D THERU_04925 hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D THERU_03295 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_06515 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D THERU_03300 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_06520 ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D THERU_03305 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D THERU_06525 ferredoxin oxidoreductase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:trd03020] D THERU_07300 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D THERU_07305 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D THERU_01535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D THERU_01155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:trd03010] D THERU_03060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D THERU_03045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D THERU_03040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D THERU_02175 ribosomal protein S01 K02945 RP-S1; small subunit ribosomal protein S1 D THERU_05630 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D THERU_07365 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D THERU_01530 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D THERU_01480 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D THERU_07880 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D THERU_07315 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D THERU_01465 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D THERU_06255 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D THERU_07330 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D THERU_01525 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D THERU_07310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D THERU_01520 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D THERU_01460 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D THERU_01375 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D THERU_02550 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D THERU_07380 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D THERU_07870 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D THERU_07355 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D THERU_06165 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D THERU_00320 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D THERU_07280 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D THERU_07350 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D THERU_07335 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D THERU_07340 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D THERU_01455 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D THERU_01470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D THERU_07865 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D THERU_07285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D THERU_07275 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D THERU_07290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D THERU_06250 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D THERU_01445 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D THERU_01490 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D THERU_07370 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D THERU_01540 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D THERU_01475 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D THERU_06565 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D THERU_01300 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D THERU_07170 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D THERU_07360 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D THERU_07345 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D THERU_01450 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D THERU_03110 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D THERU_07165 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D THERU_04535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D THERU_07375 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D THERU_01485 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D THERU_07600 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D THERU_07820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D THERU_07255 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D THERU_00900 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D THERU_06295 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D THERU_01515 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:trd00970] D THERU_00280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_03050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_04520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_00385 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_00390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_07445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_07990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_05855 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D THERU_08245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D THERU_03640 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D THERU_03100 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D THERU_04325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D THERU_00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_03645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_07240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_00135 tRNA-His K14226 tRNA-His; tRNA His D THERU_03055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D THERU_03345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_05550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_05700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_06155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_06955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_01850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D THERU_05805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D THERU_02780 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_06665 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_08145 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_03430 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D THERU_02165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_07215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_07995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_02890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_03240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_06440 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_08225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_01365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07245 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07260 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D THERU_07235 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D THERU_02870 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07440 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07635 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07640 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_01350 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D THERU_01105 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D THERU_03685 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D THERU_00570 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D THERU_07665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D THERU_06925 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D THERU_05395 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D THERU_05295 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D THERU_02200 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D THERU_02425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D THERU_02590 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D THERU_05655 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D THERU_01065 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D THERU_03475 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D THERU_04120 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D THERU_05945 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_06500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_02975 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D THERU_01585 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D THERU_05475 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D THERU_01195 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D THERU_01795 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D THERU_01295 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D THERU_08190 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D THERU_07110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D THERU_01025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes D THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:trd03060] D THERU_01495 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D THERU_07265 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D THERU_00270 protein export membrane protein K03075 secG; preprotein translocase subunit SecG D THERU_01340 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D THERU_08170 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D THERU_01890 membrane protein K03210 yajC; preprotein translocase subunit YajC D THERU_00910 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D THERU_04125 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D THERU_03520 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D THERU_03610 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D THERU_00545 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D THERU_01770 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D THERU_00010 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D THERU_00015 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D THERU_01570 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D THERU_06975 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D THERU_04765 heat-shock protein K13993 HSP20; HSP20 family protein C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:trd04122] D THERU_05500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D THERU_00150 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D THERU_05955 thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D THERU_02850 molybdopterin synthase K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D THERU_06070 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D THERU_04250 molybdopterin converting factor K03636 moaD; sulfur-carrier protein D THERU_07785 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D THERU_07645 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D THERU_03225 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D THERU_03770 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D THERU_05830 thiamine biosynthesis sulfur transfer protein K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:trd03018] D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D THERU_01370 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D THERU_07585 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D THERU_06610 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D THERU_00375 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D THERU_08205 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D THERU_00750 RNA chaperone Hfq K03666 hfq; host factor-I protein D THERU_03340 iron-sulfur cluster assembly protein HesB K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:trd03030] D THERU_05510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D THERU_00605 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D THERU_07545 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D THERU_07505 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D THERU_04085 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D THERU_07095 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D THERU_01865 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D THERU_07610 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_06570 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D THERU_00695 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] C 03410 Base excision repair [PATH:trd03410] D THERU_03975 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D THERU_08485 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D THERU_00550 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D THERU_07560 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D THERU_05240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:trd03420] D THERU_03035 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D THERU_02655 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D THERU_04785 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D THERU_05100 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D THERU_05600 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] C 03430 Mismatch repair [PATH:trd03430] D THERU_08210 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D THERU_03125 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D THERU_05180 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D THERU_05600 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D THERU_05240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_00605 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D THERU_07095 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D THERU_07545 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D THERU_04085 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D THERU_07505 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D THERU_05510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03440 Homologous recombination [PATH:trd03440] D THERU_05240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_03800 recombinase RecR K06187 recR; recombination protein RecR D THERU_00565 protein RecA K03553 recA; recombination protein RecA D THERU_00055 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D THERU_00605 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D THERU_07095 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D THERU_07545 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D THERU_04085 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D THERU_07505 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D THERU_05510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D THERU_02130 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:trd02010] D THERU_04655 nitrate ABC transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D THERU_04660 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D THERU_04665 sulfate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D THERU_03795 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D THERU_03785 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D THERU_03780 GTPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D THERU_08410 ABC transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D THERU_04525 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D THERU_07780 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D THERU_03160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D THERU_03155 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D THERU_03150 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D THERU_03145 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D THERU_08450 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D THERU_08460 ABC transporter K09816 znuB; zinc transport system permease protein D THERU_08455 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D THERU_04825 cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D THERU_04820 ABC type permease K02008 cbiQ; cobalt/nickel transport system permease protein D THERU_04815 ABC transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein D THERU_04840 nickel transporter K10094 cbiK; nickel transport protein D THERU_04835 hypothetical protein K16915 cbiL; nickel transport protein D THERU_03170 ABC transporter K09808 lolC_E_F; lipoprotein-releasing system permease protein D THERU_04140 lipoprotein releasing system transmembrane protein, LolC/E family K09808 lolC_E_F; lipoprotein-releasing system permease protein D THERU_00990 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D THERU_02880 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D THERU_07420 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D THERU_07730 ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:trd03070] D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_06790 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D THERU_06785 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D THERU_06470 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D THERU_01270 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D THERU_01255 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D THERU_01340 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D THERU_08170 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D THERU_07265 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D THERU_00270 protein export membrane protein K03075 secG; preprotein translocase subunit SecG D THERU_01495 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D THERU_01890 membrane protein K03210 yajC; preprotein translocase subunit YajC D THERU_00910 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D THERU_04125 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D THERU_03610 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D THERU_03520 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D THERU_01770 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D THERU_00010 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D THERU_00015 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:trd02020] D THERU_00920 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D THERU_07940 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D THERU_06080 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D THERU_03160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D THERU_07975 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D THERU_00740 flagellin K02406 fliC; flagellin D THERU_06290 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D THERU_03490 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D THERU_03285 heme transporter CcmB K02259 COX15; heme a synthase [EC:1.17.99.9] D THERU_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D THERU_07070 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_02915 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D THERU_01815 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D THERU_07040 ATPase AAA K02584 nifA; Nif-specific regulatory protein D THERU_08155 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D THERU_05775 peptidase K02650 pilA; type IV pilus assembly protein PilA D THERU_05780 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D THERU_04895 Ni/Fe hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D THERU_04925 hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D THERU_04850 Uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D THERU_04855 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D THERU_04860 Ni/Fe-hydrogenase b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D THERU_06695 (2Fe-2S)-binding protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D THERU_06700 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D THERU_06705 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D THERU_06170 cytochrome C K08738 CYC; cytochrome c D THERU_06400 cytochrome C' K08738 CYC; cytochrome c D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_00060 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecule (CAM) interaction C 04517 IgSF CAM signaling C 04518 Integrin signaling C 04519 Cadherin signaling # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagocytosis C 04142 Lysosome biogenesis C 04146 Peroxisome [PATH:trd04146] D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D THERU_08440 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D THERU_02615 superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D THERU_02250 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04149 Peroxisome - yeast C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:trd04148] D THERU_01170 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D THERU_06695 (2Fe-2S)-binding protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence C 04156 Integrated stress response (ISR) signaling pathway [PATH:trd04156] D THERU_02780 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_06665 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_08145 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:trd02024] D THERU_00750 RNA chaperone Hfq K03666 hfq; host factor-I protein D THERU_03340 iron-sulfur cluster assembly protein HesB K03666 hfq; host factor-I protein D THERU_01290 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D THERU_00040 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D THERU_03470 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D THERU_08300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D THERU_07715 ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D THERU_06815 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D THERU_02715 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D THERU_02345 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D THERU_00910 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D THERU_07265 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D THERU_00270 protein export membrane protein K03075 secG; preprotein translocase subunit SecG D THERU_01495 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D THERU_01890 membrane protein K03210 yajC; preprotein translocase subunit YajC D THERU_04125 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D THERU_03610 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D THERU_03520 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:trd02030] D THERU_06495 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D THERU_03390 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D THERU_00100 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D THERU_03490 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D THERU_03485 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:trd02040] D THERU_03380 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE D THERU_06495 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D THERU_06490 hypothetical protein K02411 fliH; flagellar assembly protein FliH D THERU_03130 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D THERU_08280 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D THERU_03390 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D THERU_00100 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D THERU_08270 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D THERU_08265 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D THERU_08260 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D THERU_08320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D THERU_08255 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D THERU_04100 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D THERU_03370 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D THERU_03375 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D THERU_06855 flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D THERU_06850 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D THERU_02045 flagellar hook basal-body protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D THERU_00430 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D THERU_02440 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D THERU_02445 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D THERU_00065 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D THERU_03835 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D THERU_03830 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D THERU_00740 flagellin K02406 fliC; flagellin D THERU_00730 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D THERU_00725 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D THERU_03490 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D THERU_03485 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D THERU_00060 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D THERU_01240 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D THERU_07970 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D THERU_08155 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D THERU_06290 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagosome formation C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:trd04981] D THERU_08200 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D THERU_02330 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:trd01501] D THERU_00485 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_07845 acriflavin resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_00690 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D THERU_07850 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_06120 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D THERU_01175 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D THERU_06450 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:trd01502] D THERU_06205 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D THERU_02740 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D THERU_07835 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D THERU_08340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D THERU_06335 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:trd01503] D THERU_01120 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D THERU_07975 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D THERU_00485 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_07845 acriflavin resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_00690 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D THERU_07850 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_02650 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:trd01000] C 01001 Protein kinases [BR:trd01001] D THERU_00920 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D THERU_02915 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:trd01009] D THERU_03705 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D THERU_00610 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:trd01002] D THERU_06975 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] D THERU_03860 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D THERU_04865 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D THERU_03700 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D THERU_04755 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D THERU_04020 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D THERU_07720 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D THERU_01275 abortive infection protein K07052 K07052; CAAX protease family protein D THERU_01760 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D THERU_00130 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D THERU_01505 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D THERU_08150 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D THERU_07810 aminopeptidase K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10] D THERU_08415 peptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D THERU_05670 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D THERU_00760 protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D THERU_01230 zinc protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D THERU_00520 archaemetzincin K06974 amzA; archaemetzincin [EC:3.4.-.-] D THERU_07975 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D THERU_05710 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D THERU_03615 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D THERU_01570 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D THERU_00640 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D THERU_01040 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D THERU_06460 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D THERU_06180 rhomboid family protein K07059 rho2; rhomboid family protease [EC:3.4.21.105] D THERU_05200 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D THERU_08285 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D THERU_00650 peptidase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:trd01003] D THERU_01610 hypothetical protein K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D THERU_00955 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D THERU_06120 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D THERU_07200 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_02965 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_05925 glycosyl transferase family 1 K21011 pelF; polysaccharide biosynthesis protein PelF D THERU_04030 glucosyltransferase K17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293] C 01005 Lipopolysaccharide biosynthesis proteins [BR:trd01005] D THERU_02650 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D THERU_03315 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D THERU_03195 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D THERU_07115 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D THERU_02820 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D THERU_02110 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D THERU_07205 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D THERU_04760 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D THERU_05495 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D THERU_04185 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D THERU_07220 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D THERU_02535 bifunctional protein RfaE, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D THERU_00960 glycerol-3-phosphate cytidylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D THERU_07195 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D THERU_01010 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D THERU_00915 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:trd01011] D THERU_08020 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D THERU_06200 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D THERU_05245 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D THERU_06245 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D THERU_00800 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D THERU_06205 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D THERU_02740 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D THERU_06405 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D THERU_08340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D THERU_06335 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D THERU_01840 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D THERU_04005 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D THERU_06160 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D THERU_06120 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D THERU_01175 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D THERU_06450 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D THERU_07200 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_02965 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_01145 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D THERU_06840 murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D THERU_02855 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D THERU_05725 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D THERU_07490 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D THERU_01120 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:trd01004] D THERU_01090 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D THERU_07830 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D THERU_06145 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D THERU_03355 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D THERU_02790 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D THERU_03180 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D THERU_06760 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D THERU_07825 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D THERU_00120 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D THERU_00595 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:trd01006] D THERU_08350 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D THERU_05515 octoprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D THERU_00835 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D THERU_01235 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D THERU_02180 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D THERU_03280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:trd01007] D THERU_01350 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D THERU_07110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D THERU_01025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D THERU_05655 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D THERU_05475 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D THERU_01065 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D THERU_02975 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D THERU_04120 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D THERU_05945 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_06500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_01585 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D THERU_06925 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D THERU_01795 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D THERU_05395 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D THERU_05295 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D THERU_02425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D THERU_01195 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D THERU_02200 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D THERU_07665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D THERU_01295 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D THERU_08190 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D THERU_07750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D THERU_02230 aspartate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D THERU_02265 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D THERU_07565 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D THERU_06845 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D THERU_02750 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D THERU_06110 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D THERU_01140 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D THERU_07815 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:trd00194] D THERU_01685 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D THERU_03565 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D THERU_03605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D THERU_05560 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D THERU_03665 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D THERU_03670 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D THERU_03675 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D THERU_00895 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D THERU_00890 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D THERU_06320 ATP synthase K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:trd03000] D THERU_03505 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D THERU_04600 DeoR family transcriptional regulator K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor D THERU_00365 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D THERU_04160 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D THERU_08230 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D THERU_02140 Crp/Fnr family transcription regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D THERU_02355 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D THERU_03825 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D THERU_07040 ATPase AAA K02584 nifA; Nif-specific regulatory protein D THERU_04845 NAD+ synthetase K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D THERU_01580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D THERU_02235 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:trd03021] D THERU_01535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D THERU_07300 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D THERU_07305 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D THERU_01155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D THERU_01240 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D THERU_07970 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D THERU_08155 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D THERU_06290 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D THERU_07690 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D THERU_01775 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D THERU_07270 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D THERU_02235 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D THERU_00375 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:trd03019] D THERU_00410 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D THERU_08205 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D THERU_07585 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D THERU_06610 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D THERU_01370 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D THERU_00375 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D THERU_00750 RNA chaperone Hfq K03666 hfq; host factor-I protein D THERU_03340 iron-sulfur cluster assembly protein HesB K03666 hfq; host factor-I protein C 03041 Spliceosome C 03011 Ribosome [BR:trd03011] D THERU_02175 ribosomal protein S01 K02945 RP-S1; small subunit ribosomal protein S1 D THERU_05630 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D THERU_07365 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D THERU_01530 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D THERU_01480 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D THERU_07880 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D THERU_07315 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D THERU_01465 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D THERU_06255 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D THERU_07330 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D THERU_01525 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D THERU_07310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D THERU_01520 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D THERU_01460 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D THERU_01375 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D THERU_02550 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D THERU_07380 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D THERU_07870 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D THERU_07355 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D THERU_06165 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D THERU_00320 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D THERU_07280 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D THERU_07350 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D THERU_07335 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D THERU_07340 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D THERU_01455 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D THERU_01470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D THERU_07865 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D THERU_07285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D THERU_07275 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D THERU_07290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D THERU_06250 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D THERU_01445 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D THERU_01490 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D THERU_07370 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D THERU_01540 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D THERU_01475 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D THERU_06565 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D THERU_01300 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D THERU_07170 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D THERU_07360 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D THERU_07345 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D THERU_01450 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D THERU_07165 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D THERU_04535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D THERU_07375 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D THERU_01485 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D THERU_07600 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D THERU_07820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D THERU_07255 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D THERU_00900 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D THERU_06295 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D THERU_01515 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D THERU_03110 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D THERU_03060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D THERU_03045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D THERU_03040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:trd03009] D THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D THERU_08445 era; GTPase Era K03595 era; GTPase D THERU_08480 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D THERU_02235 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D THERU_07690 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D THERU_01775 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D THERU_07270 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D THERU_02410 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D THERU_07475 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D THERU_00440 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D THERU_08380 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D THERU_06575 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D THERU_04310 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D THERU_01550 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D THERU_05790 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D THERU_07725 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D THERU_01575 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D THERU_07495 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D THERU_07685 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D THERU_05225 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D THERU_03320 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D THERU_03810 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338] D THERU_07705 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D THERU_05325 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D THERU_03970 ribonucleotide-diphosphate reductase subunit beta K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D THERU_00410 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D THERU_02860 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D THERU_06610 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D THERU_07930 GTPase Der K03977 engA; GTPase D THERU_03335 GTP-binding protein HflX K03665 hflX; GTPase D THERU_04130 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D THERU_05215 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D THERU_07695 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D THERU_00420 hypothetical protein K09710 ybeB; ribosome-associated protein D THERU_07520 hypothetical protein K07042 ybeY; probable rRNA maturation factor D THERU_08425 sigma 54 modulation protein/30S ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D THERU_04575 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D THERU_01675 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:trd03016] D THERU_03555 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D THERU_07650 tRNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D THERU_02185 hypothetical protein K24956 ZBTB8OS; protein archease D THERU_01195 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D THERU_02975 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D THERU_05945 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_06500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_01065 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D THERU_05475 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D THERU_01585 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D THERU_06925 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D THERU_07665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D THERU_02200 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D THERU_02425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D THERU_05655 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D THERU_04120 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D THERU_01795 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D THERU_01295 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D THERU_08190 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D THERU_07110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D THERU_01025 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D THERU_06410 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D THERU_04275 zinc-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D THERU_04135 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D THERU_02835 threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5] D THERU_08065 N2,N2-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D THERU_08385 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D THERU_07615 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D THERU_07965 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D THERU_05500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D THERU_04130 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D THERU_01235 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D THERU_00380 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D THERU_00085 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D THERU_06035 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D THERU_03560 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D THERU_00290 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D THERU_05395 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D THERU_05295 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D THERU_01350 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D THERU_03955 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D THERU_02875 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D THERU_07430 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D THERU_05955 thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D THERU_05825 CTU1/ATPBD3 family protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D THERU_00150 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D THERU_08050 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D THERU_02040 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D THERU_03630 queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D THERU_06960 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D THERU_00315 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D THERU_03290 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D THERU_01125 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D THERU_01315 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D THERU_00125 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D THERU_03360 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D THERU_01110 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D THERU_00645 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D THERU_03410 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D THERU_07585 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D THERU_01370 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:trd03012] D THERU_01130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D THERU_04515 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D THERU_01905 elongation factor Ts K02357 tsf; elongation factor Ts D THERU_07250 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_07325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_07320 fusA; elongation factor P K02355 fusA; elongation factor G D THERU_02585 translation elongation factor K03833 selB; selenocysteine-specific elongation factor D THERU_07605 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D THERU_03250 ribosome recycling factor K02838 frr; ribosome recycling factor D THERU_00265 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D THERU_03115 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D THERU_01510 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D THERU_07950 elongation factor P K02356 efp; elongation factor P D THERU_01715 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D THERU_03455 hypothetical protein K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:trd03110] D THERU_04330 molecular chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D THERU_08360 ATP-dependent Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D THERU_05715 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D THERU_04200 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D THERU_00370 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D THERU_07735 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D THERU_01440 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D THERU_05635 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D THERU_04765 heat-shock protein K13993 HSP20; HSP20 family protein D THERU_06900 molecular chaperone GroES K04078 groES; chaperonin GroES D THERU_07975 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D THERU_05670 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D THERU_00890 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D THERU_03585 hypothetical protein K09796 pccA; periplasmic copper chaperone A D THERU_04880 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D THERU_04900 hydrogenase K04652 hypB; hydrogenase nickel incorporation protein HypB D THERU_02240 Formiminotransferase domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D THERU_05690 SurA domain-containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D THERU_00335 thioredoxin K03671 TXN; thioredoxin D THERU_05220 thioredoxin K03671 TXN; thioredoxin D THERU_01050 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D THERU_03760 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:trd04131] D THERU_03660 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D THERU_00545 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D THERU_02805 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D THERU_06025 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:trd04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:trd03032] D THERU_00445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D THERU_02170 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D THERU_04170 histidyl-tRNA synthetase K05788 ihfB; integration host factor subunit beta D THERU_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D THERU_01865 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D THERU_06835 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D THERU_07610 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_00605 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D THERU_07095 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D THERU_04085 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D THERU_07505 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D THERU_05510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D THERU_07545 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D THERU_06570 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D THERU_00695 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D THERU_01910 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D THERU_04320 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D THERU_07425 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D THERU_06885 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:trd03036] D THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D THERU_00445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D THERU_02170 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D THERU_04170 histidyl-tRNA synthetase K05788 ihfB; integration host factor subunit beta D THERU_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D THERU_00750 RNA chaperone Hfq K03666 hfq; host factor-I protein D THERU_03340 iron-sulfur cluster assembly protein HesB K03666 hfq; host factor-I protein D THERU_08355 chromosome partitioning protein Smc K03529 smc; chromosome segregation protein D THERU_07155 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A D THERU_06215 cell division protein FtsA K03590 ftsA; cell division protein FtsA D THERU_06450 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D THERU_06210 hypothetical protein K03589 ftsQ; cell division protein FtsQ D THERU_07200 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_06220 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D THERU_01120 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D THERU_00485 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_07845 acriflavin resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_05860 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D THERU_05865 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D THERU_05870 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D THERU_01190 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D THERU_01185 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D THERU_01180 hypothetical protein K03571 mreD; rod shape-determining protein MreD D THERU_02965 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_05065 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D THERU_01580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D THERU_00085 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D THERU_08380 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D THERU_02875 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D THERU_07435 integrase K04763 xerD; integrase/recombinase XerD D THERU_05505 mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D THERU_07575 GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:trd03400] D THERU_01960 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D THERU_03975 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D THERU_08485 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D THERU_05190 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D THERU_01360 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D THERU_00550 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D THERU_07560 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D THERU_05240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D THERU_03035 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D THERU_02655 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D THERU_04785 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D THERU_05100 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D THERU_05600 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D THERU_07300 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D THERU_07305 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D THERU_01535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D THERU_01155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D THERU_08210 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D THERU_03125 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D THERU_05180 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D THERU_00605 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D THERU_07095 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D THERU_04085 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D THERU_07505 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D THERU_05510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D THERU_07545 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_00565 protein RecA K03553 recA; recombination protein RecA D THERU_05330 endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D THERU_02130 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D THERU_00240 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D THERU_00235 ATP-dependent dsDNA exonuclease subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D THERU_06065 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D THERU_00055 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D THERU_03800 recombinase RecR K06187 recR; recombination protein RecR D THERU_06380 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D THERU_04465 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D THERU_01910 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D THERU_04320 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D THERU_07425 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D THERU_00445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D THERU_02170 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D THERU_04170 histidyl-tRNA synthetase K05788 ihfB; integration host factor subunit beta D THERU_03395 DNA polymerase III K02347 polX; DNA polymerase (family X) D THERU_04270 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D THERU_00030 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D THERU_00875 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:trd03029] D THERU_06700 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D THERU_01130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D THERU_04515 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D THERU_01905 elongation factor Ts K02357 tsf; elongation factor Ts D THERU_07250 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_07325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_07320 fusA; elongation factor P K02355 fusA; elongation factor G D THERU_08445 era; GTPase Era K03595 era; GTPase D THERU_07110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D THERU_05945 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_06500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D THERU_06925 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D THERU_05475 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D THERU_01105 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D THERU_03685 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D THERU_00570 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D THERU_07875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D THERU_00300 membrane protein K07277 SAM50; outer membrane protein insertion porin family D THERU_07765 membrane protein K07277 SAM50; outer membrane protein insertion porin family D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_05635 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D THERU_06900 molecular chaperone GroES K04078 groES; chaperonin GroES D THERU_00370 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D THERU_07735 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D THERU_05500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D THERU_05505 mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D THERU_03280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D THERU_03285 heme transporter CcmB K02259 COX15; heme a synthase [EC:1.17.99.9] D THERU_00910 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D THERU_00825 photosynthetic protein synthase I K07152 SCO1; protein SCO1 D THERU_02095 hypothetical protein K07152 SCO1; protein SCO1 D THERU_05610 photosynthetic protein synthase I K07152 SCO1; protein SCO1 D THERU_08375 hypothetical protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:trd02000] D THERU_07730 ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D THERU_03795 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D THERU_03785 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D THERU_03780 GTPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D THERU_04655 nitrate ABC transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D THERU_04660 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D THERU_04665 sulfate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D THERU_06965 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D THERU_08410 ABC transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D THERU_04525 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D THERU_07780 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D THERU_03160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D THERU_03155 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D THERU_03150 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D THERU_03145 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D THERU_08300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D THERU_07715 ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D THERU_06815 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D THERU_02715 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D THERU_02345 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D THERU_08450 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D THERU_08460 ABC transporter K09816 znuB; zinc transport system permease protein D THERU_08455 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D THERU_04820 ABC type permease K02008 cbiQ; cobalt/nickel transport system permease protein D THERU_04825 cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D THERU_04815 ABC transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein D THERU_04840 nickel transporter K10094 cbiK; nickel transport protein D THERU_04835 hypothetical protein K16915 cbiL; nickel transport protein D THERU_03540 adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D THERU_03535 metal ion ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D THERU_07420 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D THERU_03170 ABC transporter K09808 lolC_E_F; lipoprotein-releasing system permease protein D THERU_04140 lipoprotein releasing system transmembrane protein, LolC/E family K09808 lolC_E_F; lipoprotein-releasing system permease protein D THERU_00990 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D THERU_02880 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D THERU_02395 multidrug transporter MatE K26939 norM; MATE family, multidrug efflux pump D THERU_00460 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D THERU_06025 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D THERU_07060 ammonia channel protein K03320 amt; ammonium transporter, Amt family D THERU_03490 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D THERU_03485 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D THERU_02015 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D THERU_06095 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D THERU_06350 TolQ K03561 exbB; biopolymer transport protein ExbB D THERU_02020 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D THERU_06090 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D THERU_06345 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D THERU_04230 magnesium transporter K03284 corA; magnesium transporter D THERU_02305 chromosome condensation protein CrcB K06199 crcB; fluoride exporter D THERU_00260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D THERU_02350 hemolysin activation protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D THERU_02980 aromatic hydrocarbon degradation membrane protein K06076 fadL; long-chain fatty acid transport protein D THERU_02010 TonB-denpendent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D THERU_03120 membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D THERU_06100 TonB-denpendent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_00300 membrane protein K07277 SAM50; outer membrane protein insertion porin family D THERU_07765 membrane protein K07277 SAM50; outer membrane protein insertion porin family D THERU_00415 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D THERU_02155 hypothetical protein K09800 tamB; translocation and assembly module TamB D THERU_04175 sugar ABC transporter substrate-binding protein K09774 lptA; lipopolysaccharide export system protein LptA D THERU_00505 organic solvent tolerance protein K04744 lptD; LPS-assembly protein D THERU_07075 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D THERU_00690 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D THERU_07850 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D THERU_07555 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D THERU_06750 sodium:solute symporter K14393 actP; cation/acetate symporter D THERU_01355 sodium:proton antiporter K26730 napA; Na+:H+ antiporter D THERU_00360 potassium transporter TrkA K07228 khtT; K+:H+ antiporter subunit KhtT D THERU_00355 sodium:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU D THERU_02100 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D THERU_02105 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein D THERU_06560 DNA repair protein HhH-GPD K03321 TC.SULP; sulfate permease, SulP family D THERU_00545 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D THERU_02375 arylsulfatase K03893 arsB; arsenical pump membrane protein D THERU_04005 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D THERU_06160 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D THERU_08140 transporter K24180 mleP; malate permease and related proteins D THERU_07200 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D THERU_03190 TonB family protein K03832 tonB; periplasmic protein TonB D THERU_06085 hypothetical protein K03832 tonB; periplasmic protein TonB D THERU_04240 peptidoglycan-binding protein K03640 pal; peptidoglycan-associated lipoprotein D THERU_00705 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D THERU_04625 arsenite oxidase small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D THERU_04630 arsenite oxidase large subunit K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1] D THERU_00465 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D THERU_00485 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_07845 acriflavin resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_03730 FeoA family protein K04758 feoA; ferrous iron transport protein A D THERU_03725 iron transporter FeoB K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:trd02044] D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein D THERU_06785 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D THERU_06790 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D THERU_01255 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D THERU_06470 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D THERU_01270 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D THERU_03860 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D THERU_05775 peptidase K02650 pilA; type IV pilus assembly protein PilA D THERU_05780 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D THERU_04500 pilus biosynthesis protein TapB K02652 pilB; type IV pilus assembly protein PilB D THERU_02990 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D THERU_05305 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D THERU_00845 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D THERU_00560 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D THERU_01165 twitching motility protein K02669 pilT; twitching motility protein PilT D THERU_02985 twitching motility protein pilT K02669 pilT; twitching motility protein PilT D THERU_05745 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 D THERU_01545 hypothetical protein K02221 yggT; YggT family protein D THERU_01205 hypothetical protein K02238 comEC; competence protein ComEC D THERU_08320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D THERU_08255 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D THERU_04210 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D THERU_06490 hypothetical protein K02411 fliH; flagellar assembly protein FliH D THERU_03130 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D THERU_00100 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D THERU_08270 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D THERU_08265 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D THERU_08260 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D THERU_01050 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D THERU_03760 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D THERU_04125 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D THERU_01340 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D THERU_07265 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D THERU_08170 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D THERU_00270 protein export membrane protein K03075 secG; preprotein translocase subunit SecG D THERU_01495 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D THERU_03520 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D THERU_03610 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D THERU_01890 membrane protein K03210 yajC; preprotein translocase subunit YajC D THERU_00910 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D THERU_01770 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D THERU_00010 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D THERU_00015 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:trd02042] D THERU_00260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D THERU_02350 hemolysin activation protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:trd02022] D THERU_00920 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D THERU_07940 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D THERU_01935 LytTR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator D THERU_02915 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D THERU_01815 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D THERU_04805 hydrogenase maturation protein K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX C 02035 Bacterial motility proteins [BR:trd02035] D THERU_06490 hypothetical protein K02411 fliH; flagellar assembly protein FliH D THERU_03130 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D THERU_08270 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D THERU_08265 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D THERU_08260 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D THERU_08320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D THERU_08255 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D THERU_06495 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D THERU_03390 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D THERU_00100 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D THERU_02445 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D THERU_04100 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D THERU_02440 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D THERU_08280 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D THERU_03380 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE D THERU_03370 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D THERU_03375 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D THERU_06855 flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D THERU_02045 flagellar hook basal-body protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D THERU_00430 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D THERU_00065 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D THERU_06850 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D THERU_03835 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D THERU_03830 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D THERU_00740 flagellin K02406 fliC; flagellin D THERU_00730 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D THERU_00725 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D THERU_06290 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D THERU_03490 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D THERU_03485 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D THERU_00060 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D THERU_00735 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D THERU_08325 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D THERU_08330 septum formation initiator K04562 flhG; flagellar biosynthesis protein FlhG D THERU_00560 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D THERU_01165 twitching motility protein K02669 pilT; twitching motility protein PilT D THERU_02985 twitching motility protein pilT K02669 pilT; twitching motility protein PilT D THERU_05775 peptidase K02650 pilA; type IV pilus assembly protein PilA D THERU_05780 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D THERU_04500 pilus biosynthesis protein TapB K02652 pilB; type IV pilus assembly protein PilB D THERU_02990 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D THERU_03860 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D THERU_00845 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D THERU_05305 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D THERU_05745 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:trd04812] D THERU_08180 dioxygenase K06990 MEMO1; MEMO1 family protein D THERU_01190 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D THERU_06220 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D THERU_06215 cell division protein FtsA K03590 ftsA; cell division protein FtsA D THERU_05860 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D THERU_05865 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D THERU_05870 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D THERU_05065 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D THERU_01580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:trd04147] D THERU_05590 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D THERU_02805 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D THERU_07030 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D THERU_06905 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D THERU_01435 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D THERU_01380 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D THERU_07250 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_07325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D THERU_04275 zinc-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D THERU_01895 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D THERU_03705 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D THERU_01500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D THERU_03745 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D THERU_03215 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D THERU_01880 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D THERU_07065 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D THERU_02570 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D THERU_08235 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D THERU_01635 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D THERU_01820 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D THERU_00880 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D THERU_06015 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D THERU_02560 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:trd02048] D THERU_04465 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D THERU_04470 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D THERU_04455 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D THERU_05040 helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D THERU_04445 CRISPR-associated protein K19075 cst2; CRISPR-associated protein Cst2 D THERU_04460 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D THERU_04450 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D THERU_05060 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D THERU_05055 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1 D THERU_05050 CRISPR-associated protein Csh2 K19115 csh2; CRISPR-associated protein Csh2 D THERU_05045 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h D THERU_04375 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1 D THERU_04380 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D THERU_04385 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D THERU_04390 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3 D THERU_04395 CRISPR-associated protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4 D THERU_04405 hypothetical protein K19141 cmr5; CRISPR-associated protein Cmr5 D THERU_04410 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6 D THERU_04420 hypothetical protein K19143 csx1; CRISPR-associated protein Csx1 D THERU_01915 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D THERU_01920 type I restriction-modification protein subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D THERU_06220 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D THERU_01190 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D THERU_05500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:trd01504] D THERU_00485 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_07845 acriflavin resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system D THERU_00690 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D THERU_07850 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D THERU_00470 transporter K12340 tolC; outer membrane protein D THERU_00480 transporter K12340 tolC; outer membrane protein D THERU_07840 transporter K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:trd03100] D THERU_00280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_03050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_04520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D THERU_00385 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_00390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_07445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_07990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D THERU_05855 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D THERU_08245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D THERU_03640 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D THERU_03100 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D THERU_04325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D THERU_00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_03645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_07240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D THERU_00135 tRNA-His K14226 tRNA-His; tRNA His D THERU_03055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D THERU_03345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_05550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_05700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_06155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_06955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D THERU_01850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D THERU_05805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D THERU_02780 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_06665 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_08145 tRNA-Met K14230 tRNA-Met; tRNA Met D THERU_03430 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D THERU_02165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_07215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_07995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D THERU_02890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_03240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_06440 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_08225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D THERU_01365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07245 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D THERU_07260 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D THERU_07235 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D THERU_02870 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07440 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07635 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_07640 tRNA-Val K14237 tRNA-Val; tRNA Val D THERU_03060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D THERU_03045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D THERU_03040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D THERU_06985 oxidoreductase K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D THERU_06990 aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D THERU_03440 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D THERU_00175 heterodisulfide reductase K28385 hdrA; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit A [EC:1.8.4.17] D THERU_00170 heterodisulfide reductase subunit B K28386 hdrB; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit B [EC:1.8.4.17] D THERU_00190 disulfide reductase K28386 hdrB; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit B [EC:1.8.4.17] D THERU_00165 heterodisulfide reductase subunit C K28387 hdrC; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit C [EC:1.8.4.17] D THERU_00185 heterodisulfide reductase subunit C K28387 hdrC; sulfur-oxidizing heterodisulfide reductase-like enzyme system (type I) subunit C [EC:1.8.4.17] D THERU_02210 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D THERU_03930 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D THERU_07755 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D THERU_02260 oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D THERU_02370 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D THERU_03510 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D THERU_08175 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D THERU_00455 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D THERU_07775 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D THERU_04050 hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D THERU_07550 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D THERU_06865 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D THERU_08100 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D THERU_05345 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D THERU_04190 glutamate ammonia ligase adenylyl-transferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D THERU_08160 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D THERU_04505 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D THERU_03925 hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D THERU_02405 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D THERU_06385 DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D THERU_03075 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D THERU_05390 endoribonuclease K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D THERU_05085 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D THERU_03230 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D THERU_02680 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D THERU_03935 2-oxoglutarate decarboxylase K20140 cfiA; 2-oxoglutarate carboxylase large subunit [EC:6.4.1.7] D THERU_03940 acetyl-CoA carboxylase subunit alpha K20141 cfiB; 2-oxoglutarate carboxylase small subunit [EC:6.4.1.7] D THERU_01860 DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] D THERU_00285 cation transporter K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D THERU_00050 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D THERU_00025 acetoin utilization protein K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D THERU_06680 ferredoxin K05337 fer; ferredoxin D THERU_06685 ferredoxin K05337 fer; ferredoxin D THERU_05950 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D THERU_06950 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D THERU_02115 membrane protein K07027 K07027; glycosyltransferase 2 family protein D THERU_04340 6-phosphogluconolactonase K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D THERU_00140 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D THERU_02700 cold-shock protein K03704 cspA; cold shock protein C 99974 Translation D THERU_07920 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D THERU_05705 trigger factor K03545 tig; trigger factor D THERU_02610 formate dehydrogenase K02380 fdhE; FdhE protein D THERU_00765 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein D THERU_04795 hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC D THERU_04800 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D THERU_04885 hydrogenase assembly protein HupF K04655 hypE; hydrogenase expression/formation protein HypE D THERU_04875 transcriptional regulator K04656 hypF; hydrogenase maturation protein HypF D THERU_02810 Fis family transcriptional regulator K07391 comM; magnesium chelatase family protein D THERU_03945 OsmC family protein K07397 yhfA; putative redox protein D THERU_05425 OsmC family protein K07397 yhfA; putative redox protein D THERU_03085 ResB family protein K07399 resB; cytochrome c biogenesis protein D THERU_00855 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D THERU_00790 hypothetical protein K03630 radC; DNA repair protein RadC D THERU_06710 endonuclease K07457 K07457; endonuclease III related protein D THERU_02540 hypothetical protein K07460 yraN; putative endonuclease D THERU_01200 DNA polymerase III K04096 smf; DNA processing protein D THERU_04540 hypothetical protein K07486 K07486; transposase D THERU_05170 alkylhydroperoxidase K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D THERU_00080 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D THERU_03765 sodium:calcium symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth C 99993 Cell motility D THERU_00930 gliding motility protein K24105 mglA; mutual gliding-motility protein MglA D THERU_05565 Mutual gliding-motility protein MglA K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D THERU_07525 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D THERU_06715 hypothetical protein K07176 K07176; putative serine/threonine protein kinase D THERU_06740 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D THERU_02675 membrane protein K03634 lolA; outer membrane lipoprotein carrier protein D THERU_03495 hypothetical protein K06142 hlpA; outer membrane protein D THERU_03175 secretion protein HylD K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D THERU_00945 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D THERU_00035 dihydroorotate dehydrogenase K03926 cutA; periplasmic divalent cation tolerance protein D THERU_06425 copper resistance protein B K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D THERU_08435 nucleotide-binding protein K06878 K06878; tRNA-binding protein D THERU_02135 cyanoglobin K06886 glbN; hemoglobin D THERU_02400 patatin K07001 K07001; NTE family protein D THERU_06040 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D THERU_04780 hypothetical protein K07058 K07058; membrane protein D THERU_01245 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D THERU_04150 membrane protein K08976 K08976; putative membrane protein C 99997 Function unknown D THERU_01330 phosphohydrolase K06885 K06885; uncharacterized protein D THERU_05370 thioredoxin K06888 K06888; uncharacterized protein D THERU_03140 ATPase AAA K06923 K06923; uncharacterized protein D THERU_02060 CoA-binding protein K06929 K06929; uncharacterized protein D THERU_06265 small GTP-binding protein K06945 K06945; uncharacterized protein D THERU_02545 hypothetical protein K06960 K06960; uncharacterized protein D THERU_01620 hypothetical protein K06986 K06986; uncharacterized protein D THERU_07905 gluconokinase K07028 K07028; uncharacterized protein D THERU_03870 nucleotidyltransferase K07075 K07075; uncharacterized protein D THERU_03885 nucleotidyltransferase K07075 K07075; uncharacterized protein D THERU_02365 membrane protein K07089 K07089; uncharacterized protein D THERU_06280 permease K07089 K07089; uncharacterized protein D THERU_03635 permease K07090 K07090; uncharacterized protein D THERU_04980 permease K07090 K07090; uncharacterized protein D THERU_00160 peroxiredoxin K07092 K07092; uncharacterized protein D THERU_00205 DsrE family protein K07092 K07092; uncharacterized protein D THERU_01625 hypothetical protein K07093 K07093; uncharacterized protein D THERU_07935 metallophosphoesterase K07098 K07098; uncharacterized protein D THERU_06275 hypothetical protein K07131 K07131; uncharacterized protein D THERU_03420 radical SAM protein K07139 K07139; uncharacterized protein D THERU_02905 hypothetical protein K07150 K07150; uncharacterized protein D THERU_02970 hypothetical protein K07164 K07164; uncharacterized protein D THERU_00905 membrane protein K08998 K08998; uncharacterized protein D THERU_00985 hypothetical protein K08999 K08999; uncharacterized protein D THERU_01710 hypothetical protein K09004 K09004; uncharacterized protein D THERU_08390 hypothetical protein K09004 K09004; uncharacterized protein D THERU_05645 hypothetical protein K09131 K09131; uncharacterized protein D THERU_02300 hypothetical protein K09137 K09137; uncharacterized protein D THERU_02310 hypothetical protein K09137 K09137; uncharacterized protein D THERU_03960 hypothetical protein K09147 K09147; uncharacterized protein D THERU_00095 hypothetical protein K09776 K09776; uncharacterized protein D THERU_03620 hypothetical protein K09790 K09790; uncharacterized protein D THERU_07625 dihydroxy-acid dehydratase K09794 K09794; uncharacterized protein D THERU_01695 hypothetical protein K09804 K09804; uncharacterized protein D THERU_06545 hypothetical protein K09822 K09822; uncharacterized protein D THERU_02215 hypothetical protein K09861 K09861; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 1, 2026