+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Thermocrinis ruber

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C THERU_08445 era; GTPase Era K03595 era; GTPase C THERU_08480 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C THERU_02235 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor C THERU_07595 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor C THERU_07690 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C THERU_01775 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C THERU_07270 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D THERU_02410 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D THERU_07475 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D THERU_00440 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D THERU_08380 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D THERU_06575 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D THERU_04310 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D THERU_01550 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D THERU_05790 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D THERU_07725 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D THERU_01575 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D THERU_07495 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D THERU_01550 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D THERU_07685 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D THERU_05225 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D THERU_03320 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C THERU_03810 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C THERU_07705 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C THERU_05325 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C THERU_03970 ribonucleotide-diphosphate reductase subunit beta K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C THERU_06140 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C THERU_00410 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C THERU_02860 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C THERU_06610 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C THERU_08445 era; GTPase Era K03595 era; GTPase C THERU_07930 GTPase Der K03977 engA; GTPase C THERU_08480 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C THERU_03335 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C THERU_04130 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C THERU_05215 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C THERU_07695 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C THERU_00420 hypothetical protein K09710 ybeB; ribosome-associated protein C THERU_07520 hypothetical protein K07042 ybeY; probable rRNA maturation factor C THERU_08425 sigma 54 modulation protein/30S ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor C THERU_04575 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C THERU_01675 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024