+F Repair protein KO
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DNA Repair and Recombination Proteins - Talaromyces rugulosus
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D TRUGW13939_10056 uncharacterized protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E TRUGW13939_06072 uncharacterized protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E TRUGW13939_06628 uncharacterized protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E TRUGW13939_00092 uncharacterized protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E TRUGW13939_03982 uncharacterized protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E TRUGW13939_06455 uncharacterized protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E TRUGW13939_11092 uncharacterized protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F TRUGW13939_04992 uncharacterized protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F TRUGW13939_09888 uncharacterized protein K02328 POLD2; DNA polymerase delta subunit 2
F TRUGW13939_05244 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F TRUGW13939_03615 uncharacterized protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F TRUGW13939_06079 uncharacterized protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E TRUGW13939_00467 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
E TRUGW13939_11227 uncharacterized protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E TRUGW13939_06294 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E TRUGW13939_07772 uncharacterized protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E TRUGW13939_05042 uncharacterized protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E TRUGW13939_03370 uncharacterized protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E TRUGW13939_01194 uncharacterized protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F TRUGW13939_06560 uncharacterized protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F TRUGW13939_07605 uncharacterized protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F TRUGW13939_07999 uncharacterized protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F TRUGW13939_07977 uncharacterized protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F TRUGW13939_00126 uncharacterized protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F TRUGW13939_09652 uncharacterized protein K15082 RAD7; DNA repair protein RAD7
F TRUGW13939_09653 uncharacterized protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F TRUGW13939_09033 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F TRUGW13939_02145 uncharacterized protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F TRUGW13939_08674 uncharacterized protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F TRUGW13939_08956 uncharacterized protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F TRUGW13939_00434 uncharacterized protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F TRUGW13939_02247 uncharacterized protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F TRUGW13939_05539 uncharacterized protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F TRUGW13939_06233 uncharacterized protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F TRUGW13939_02071 uncharacterized protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F TRUGW13939_09650 uncharacterized protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F TRUGW13939_02912 uncharacterized protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F TRUGW13939_07977 uncharacterized protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F TRUGW13939_00126 uncharacterized protein K10610 DDB1; DNA damage-binding protein 1
F TRUGW13939_00665 uncharacterized protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F TRUGW13939_01685 uncharacterized protein K10841 ERCC6; DNA excision repair protein ERCC-6
F TRUGW13939_07952 uncharacterized protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E TRUGW13939_08393 uncharacterized protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E TRUGW13939_09331 uncharacterized protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E TRUGW13939_02870 uncharacterized protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E TRUGW13939_07893 uncharacterized protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E TRUGW13939_05623 uncharacterized protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E TRUGW13939_01986 uncharacterized protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E TRUGW13939_04671 uncharacterized protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E TRUGW13939_09664 uncharacterized protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E TRUGW13939_08163 uncharacterized protein K06634 CCNH; cyclin H
E TRUGW13939_00730 uncharacterized protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E TRUGW13939_06091 uncharacterized protein K07466 RFA1; replication factor A1
E TRUGW13939_00138 uncharacterized protein K10739 RFA2; replication factor A2
D Other NER factors
E TRUGW13939_03460 uncharacterized protein K10849 ERCC1; DNA excision repair protein ERCC-1
E TRUGW13939_04122 uncharacterized protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E TRUGW13939_00911 uncharacterized protein K10846 ERCC5; DNA excision repair protein ERCC-5
E TRUGW13939_06294 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E TRUGW13939_02256 uncharacterized protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E TRUGW13939_06468 uncharacterized protein K03869 CUL3; cullin 3
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E TRUGW13939_03274 uncharacterized protein K08735 MSH2; DNA mismatch repair protein MSH2
E TRUGW13939_01703 uncharacterized protein K08736 MSH3; DNA mismatch repair protein MSH3
E TRUGW13939_10071 uncharacterized protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E TRUGW13939_05651 uncharacterized protein K08734 MLH1; DNA mismatch repair protein MLH1
E TRUGW13939_05285 uncharacterized protein K10858 PMS2; DNA mismatch repair protein PMS2
E TRUGW13939_03473 uncharacterized protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E TRUGW13939_04992 uncharacterized protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E TRUGW13939_09888 uncharacterized protein K02328 POLD2; DNA polymerase delta subunit 2
E TRUGW13939_05244 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E TRUGW13939_06091 uncharacterized protein K07466 RFA1; replication factor A1
E TRUGW13939_00138 uncharacterized protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E TRUGW13939_07037 uncharacterized protein K10754 RFC1; replication factor C subunit 1
E TRUGW13939_04562 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
E TRUGW13939_02617 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
E TRUGW13939_07039 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E TRUGW13939_00467 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
E TRUGW13939_10114 uncharacterized protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E TRUGW13939_06294 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E TRUGW13939_10745 uncharacterized protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E TRUGW13939_00193 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E TRUGW13939_02714 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E TRUGW13939_00193 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E TRUGW13939_02714 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
D RecA family proteins
E TRUGW13939_09540 uncharacterized protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E TRUGW13939_03428 uncharacterized protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E TRUGW13939_10587 uncharacterized protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E TRUGW13939_09078 uncharacterized protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E TRUGW13939_05957 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E TRUGW13939_05957 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E TRUGW13939_03695 uncharacterized protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E TRUGW13939_10136 uncharacterized protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E TRUGW13939_06091 uncharacterized protein K07466 RFA1; replication factor A1
E TRUGW13939_00138 uncharacterized protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E TRUGW13939_08220 uncharacterized protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E TRUGW13939_07116 uncharacterized protein K22803 SMC5; structural maintenance of chromosomes protein 5
E TRUGW13939_11583 uncharacterized protein K22804 SMC6; structural maintenance of chromosomes protein 6
E TRUGW13939_07320 uncharacterized protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E TRUGW13939_05763 uncharacterized protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E TRUGW13939_10726 uncharacterized protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E TRUGW13939_05214 uncharacterized protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E TRUGW13939_10176 uncharacterized protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E TRUGW13939_03137 uncharacterized protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E TRUGW13939_08005 uncharacterized protein K10991 SWI5; DNA repair protein Swi5/Sae3
E TRUGW13939_08428 uncharacterized protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E TRUGW13939_04471 uncharacterized protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E TRUGW13939_02764 uncharacterized protein K11339 MORF4L1; mortality factor 4-like protein 1
E TRUGW13939_10570 uncharacterized protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E TRUGW13939_00325 uncharacterized protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E TRUGW13939_00355 uncharacterized protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E TRUGW13939_08207 uncharacterized protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E TRUGW13939_03699 uncharacterized protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E TRUGW13939_00193 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E TRUGW13939_02714 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E TRUGW13939_10840 uncharacterized protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E TRUGW13939_05675 uncharacterized protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E TRUGW13939_03127 uncharacterized protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E TRUGW13939_05042 uncharacterized protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E TRUGW13939_00499 uncharacterized protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E TRUGW13939_00877 uncharacterized protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E TRUGW13939_02176 uncharacterized protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E TRUGW13939_05957 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E TRUGW13939_03695 uncharacterized protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E TRUGW13939_10136 uncharacterized protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E TRUGW13939_00100 uncharacterized protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E TRUGW13939_05331 uncharacterized protein K11137 TELO2; telomere length regulation protein
E TRUGW13939_05655 uncharacterized protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E TRUGW13939_05261 uncharacterized protein K23314 WRAP53; telomerase Cajal body protein 1
E TRUGW13939_08162 uncharacterized protein K24752 WDR70; WD repeat-containing protein 70
E TRUGW13939_10745 uncharacterized protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D TRUGW13939_10646 uncharacterized protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D TRUGW13939_02787 uncharacterized protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D TRUGW13939_11749 uncharacterized protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D TRUGW13939_05934 uncharacterized protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D TRUGW13939_11085 uncharacterized protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D TRUGW13939_05002 uncharacterized protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D TRUGW13939_06367 uncharacterized protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D TRUGW13939_08051 uncharacterized protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D TRUGW13939_02904 uncharacterized protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D TRUGW13939_04165 uncharacterized protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D TRUGW13939_00467 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
D TRUGW13939_10736 uncharacterized protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D TRUGW13939_07793 uncharacterized protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D TRUGW13939_04233 uncharacterized protein K10903 HUS1; HUS1 checkpoint protein
D TRUGW13939_02713 uncharacterized protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D TRUGW13939_01025 uncharacterized protein K06662 HRAD17; cell cycle checkpoint protein
D TRUGW13939_04562 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
D TRUGW13939_02617 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
D TRUGW13939_07039 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D TRUGW13939_02713 uncharacterized protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D TRUGW13939_01988 uncharacterized protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D TRUGW13939_02023 uncharacterized protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D TRUGW13939_01535 uncharacterized protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D TRUGW13939_05331 uncharacterized protein K11137 TELO2; telomere length regulation protein
D TRUGW13939_06293 uncharacterized protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D TRUGW13939_07240 uncharacterized protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D TRUGW13939_02026 uncharacterized protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D TRUGW13939_05489 uncharacterized protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D TRUGW13939_10504 uncharacterized protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D TRUGW13939_09662 uncharacterized protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D TRUGW13939_06466 uncharacterized protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D TRUGW13939_00646 uncharacterized protein K06630 YWHAE; 14-3-3 protein epsilon
D TRUGW13939_09815 uncharacterized protein K06630 YWHAE; 14-3-3 protein epsilon
D TRUGW13939_08292 uncharacterized protein K06661 RAD9; DNA repair protein RAD9
D TRUGW13939_06141 uncharacterized protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D TRUGW13939_03808 uncharacterized protein K24664 FKH; forkhead protein FKH
D TRUGW13939_03621 uncharacterized protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D TRUGW13939_10536 uncharacterized protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D TRUGW13939_06465 uncharacterized protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D TRUGW13939_10954 uncharacterized protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D TRUGW13939_09343 uncharacterized protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D TRUGW13939_04318 uncharacterized protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D TRUGW13939_10016 uncharacterized protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D TRUGW13939_05466 uncharacterized protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D TRUGW13939_06315 uncharacterized protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D TRUGW13939_03301 uncharacterized protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D TRUGW13939_03097 uncharacterized protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D TRUGW13939_00274 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TRUGW13939_00396 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TRUGW13939_06249 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TRUGW13939_03481 uncharacterized protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D TRUGW13939_06368 uncharacterized protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D TRUGW13939_10056 uncharacterized protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E TRUGW13939_06072 uncharacterized protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E TRUGW13939_03490 uncharacterized protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E TRUGW13939_02914 uncharacterized protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E TRUGW13939_03982 uncharacterized protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E TRUGW13939_09948 uncharacterized protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E TRUGW13939_09948 uncharacterized protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D TRUGW13939_00274 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TRUGW13939_00396 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TRUGW13939_06249 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024