+D GENES KO
#
KEGG Orthology (KO) - Treponema ruminis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tri00010]
D DYE50_09810 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DYE50_00880 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DYE50_12010 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_03495 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_08795 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DYE50_08750 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DYE50_08790 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DYE50_00325 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DYE50_10880 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DYE50_01030 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DYE50_01910 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DYE50_01960 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_04145 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_03675 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_02845 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:tri00020]
D DYE50_08670 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DYE50_06920 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DYE50_09830 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DYE50_04395 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DYE50_02845 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DYE50_01910 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tri00030]
D DYE50_09810 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DYE50_08205 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DYE50_02250 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DYE50_02350 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DYE50_08090 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_09615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DYE50_09305 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DYE50_11245 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DYE50_00805 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DYE50_01980 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DYE50_12010 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_03495 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_00880 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tri00040]
D DYE50_12275 fibronectin type III domain-containing protein K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D DYE50_02030 right-handed parallel beta-helix repeat-containing protein K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D DYE50_01480 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D DYE50_00145 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D DYE50_00770 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D DYE50_04660 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DYE50_08205 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DYE50_09275 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D DYE50_00310 gfo/Idh/MocA family oxidoreductase K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
C 00051 Fructose and mannose metabolism [PATH:tri00051]
D DYE50_00820 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DYE50_08890 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DYE50_09490 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_06360 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_06355 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DYE50_09425 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DYE50_00880 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DYE50_12010 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_03495 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_08795 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:tri00052]
D DYE50_03675 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DYE50_03680 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_04270 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_03670 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_11440 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D DYE50_03705 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D DYE50_07900 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D DYE50_00880 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DYE50_00830 DUF4975 domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DYE50_00860 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DYE50_02310 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:tri00053]
D DYE50_04660 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DYE50_04665 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tri00500]
D DYE50_00830 DUF4975 domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DYE50_00860 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DYE50_02310 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DYE50_08880 amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D DYE50_11250 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_08755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_11490 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_03600 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_07215 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_07590 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DYE50_04820 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DYE50_03325 DUF1957 domain-containing protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DYE50_00440 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D DYE50_11520 hypothetical protein K01200 pulA; pullulanase [EC:3.2.1.41]
D DYE50_09220 hypothetical protein K01200 pulA; pullulanase [EC:3.2.1.41]
D DYE50_11525 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D DYE50_02370 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D DYE50_09185 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D DYE50_09175 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D DYE50_09430 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DYE50_10830 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DYE50_06865 DUF1926 domain-containing protein K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DYE50_08885 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D DYE50_00435 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_09810 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DYE50_00820 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DYE50_08890 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tri00520]
D DYE50_10000 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_02020 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_03475 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_04315 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D DYE50_00820 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DYE50_08890 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DYE50_02790 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DYE50_02305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DYE50_10775 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DYE50_09265 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_04660 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DYE50_03680 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_04270 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_03670 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DYE50_04665 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DYE50_09810 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DYE50_09490 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_06360 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_09425 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DYE50_06355 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DYE50_07590 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tri00620]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_01910 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DYE50_10950 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D DYE50_02985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DYE50_04195 FAD-binding protein K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D DYE50_01960 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_04145 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_06000 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D DYE50_09410 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DYE50_05815 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DYE50_05975 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DYE50_00585 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DYE50_08965 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D DYE50_08970 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D DYE50_08960 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D DYE50_04395 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DYE50_02845 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DYE50_01030 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DYE50_09335 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DYE50_10210 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tri00630]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_08670 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DYE50_06920 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DYE50_04995 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DYE50_10935 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DYE50_05825 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DYE50_09315 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_10720 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DYE50_11245 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:tri00640]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_02985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DYE50_10950 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DYE50_01960 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_04145 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:tri00650]
D DYE50_02130 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D DYE50_08970 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D DYE50_10950 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DYE50_01910 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DYE50_08525 NAD(P)-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
D DYE50_03470 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_06935 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_11630 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tri00660]
D DYE50_03470 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_06935 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_11630 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DYE50_04990 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DYE50_04985 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DYE50_09240 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D DYE50_08795 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tri00190]
D DYE50_06825 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D DYE50_08840 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D DYE50_06820 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D DYE50_08845 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D DYE50_06815 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D DYE50_08850 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D DYE50_06835 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D DYE50_08835 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D DYE50_08810 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D DYE50_06810 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D DYE50_08820 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D DYE50_06805 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D DYE50_08825 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D DYE50_10965 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tri00710]
D DYE50_08790 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DYE50_08750 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DYE50_12010 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_03495 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_02250 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DYE50_02350 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DYE50_08795 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DYE50_08205 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DYE50_01030 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tri00720]
D DYE50_01910 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DYE50_01030 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DYE50_04395 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DYE50_09830 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DYE50_06920 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DYE50_08545 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DYE50_01095 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DYE50_01035 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DYE50_02985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tri00680]
D DYE50_10720 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DYE50_04995 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DYE50_12010 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_03495 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DYE50_00880 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DYE50_02985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_00325 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DYE50_10880 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DYE50_10940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DYE50_10945 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DYE50_08650 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:tri00910]
D DYE50_11035 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DYE50_11060 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DYE50_11120 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DYE50_11030 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_11055 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_11125 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_08620 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_03615 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DYE50_09900 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DYE50_12375 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DYE50_03610 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:tri00920]
D DYE50_11000 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_02075 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_11020 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D DYE50_11005 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DYE50_04110 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D DYE50_02405 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DYE50_10980 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DYE50_08590 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DYE50_08470 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D DYE50_08610 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tri00061]
D DYE50_05095 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DYE50_08400 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DYE50_02105 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DYE50_10850 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02120 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_08410 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02115 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_03725 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08415 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DYE50_02130 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DYE50_07775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tri00071]
D DYE50_07775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tri00561]
D DYE50_10380 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DYE50_09600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DYE50_08010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D DYE50_07900 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tri00564]
D DYE50_07810 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DYE50_12515 FAD/NAD(P)-binding oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DYE50_09600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DYE50_04610 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D DYE50_05490 class I SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D DYE50_05045 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DYE50_11645 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DYE50_11650 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tri00600]
D DYE50_11440 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D DYE50_07900 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tri00230]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_09615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DYE50_09305 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DYE50_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DYE50_10240 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DYE50_10250 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DYE50_10260 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DYE50_04875 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DYE50_10670 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DYE50_10910 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DYE50_02085 inosine monophosphate cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D DYE50_11240 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DYE50_08605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DYE50_04275 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DYE50_12280 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DYE50_09445 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DYE50_09230 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DYE50_07815 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DYE50_04095 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DYE50_08915 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D DYE50_09355 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DYE50_06745 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D DYE50_01465 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DYE50_08495 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DYE50_10205 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D DYE50_04455 (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D DYE50_09665 adenylate/guanylate cyclase domain-containing response regulator K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DYE50_10245 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DYE50_10405 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DYE50_07060 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DYE50_08435 HAMP domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DYE50_00460 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DYE50_08955 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D DYE50_01075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:tri00240]
D DYE50_03605 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DYE50_03570 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DYE50_02135 dihydroorotate dehydrogenase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D DYE50_09290 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DYE50_02140 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DYE50_10800 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DYE50_07815 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DYE50_05070 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DYE50_03565 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DYE50_06730 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DYE50_10060 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D DYE50_08605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DYE50_04275 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DYE50_12280 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DYE50_08080 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D DYE50_03270 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D DYE50_01465 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DYE50_06770 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DYE50_09870 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DYE50_03710 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DYE50_10685 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tri00250]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_06155 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D DYE50_08680 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D DYE50_03560 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DYE50_11560 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DYE50_10125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DYE50_00460 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DYE50_10670 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DYE50_03615 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DYE50_09900 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DYE50_12375 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DYE50_03610 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_03605 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DYE50_03570 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DYE50_02790 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DYE50_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tri00260]
D DYE50_12440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_08895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_11450 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DYE50_09450 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DYE50_08650 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D DYE50_10840 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D DYE50_06765 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DYE50_02895 aminotransferase class V-fold PLP-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DYE50_10720 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DYE50_04995 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D DYE50_00325 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DYE50_10880 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DYE50_10940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DYE50_10945 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DYE50_11645 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DYE50_02385 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DYE50_02380 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DYE50_07160 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tri00270]
D DYE50_02405 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DYE50_10980 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DYE50_08590 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DYE50_08600 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DYE50_01025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DYE50_00695 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DYE50_12460 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DYE50_09230 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DYE50_01565 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DYE50_12455 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D DYE50_12440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_08895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_11450 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DYE50_09450 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DYE50_08470 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D DYE50_08610 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D DYE50_10860 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DYE50_02625 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DYE50_02155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_01960 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_04145 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_10940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DYE50_10945 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tri00280]
D DYE50_02155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tri00290]
D DYE50_04990 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DYE50_04985 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DYE50_09240 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DYE50_03470 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_06935 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_11630 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DYE50_08245 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DYE50_11950 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DYE50_03450 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DYE50_02155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DYE50_09335 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DYE50_10210 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tri00300]
D DYE50_12440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_08895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_11450 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DYE50_09450 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DYE50_09455 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DYE50_08910 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DYE50_10975 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DYE50_07875 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DYE50_09505 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DYE50_03370 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D DYE50_08690 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:tri00220]
D DYE50_04120 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DYE50_11560 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DYE50_10125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DYE50_00590 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DYE50_00005 ATP-grasp domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
D DYE50_00045 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_03605 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DYE50_03570 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_00345 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DYE50_08580 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DYE50_08585 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DYE50_00350 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DYE50_10975 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tri00330]
D DYE50_10660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D DYE50_09720 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D DYE50_00590 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_08690 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tri00340]
D DYE50_01130 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DYE50_01135 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DYE50_03010 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D DYE50_01470 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
C 00350 Tyrosine metabolism [PATH:tri00350]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:tri00360]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DYE50_08690 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DYE50_01975 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tri00400]
D DYE50_11480 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DYE50_08625 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DYE50_09860 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DYE50_02355 type I 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D DYE50_11070 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DYE50_11080 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DYE50_11085 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DYE50_01880 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DYE50_08540 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DYE50_08390 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DYE50_02360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DYE50_02365 bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D DYE50_02375 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D DYE50_02385 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DYE50_02380 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DYE50_07160 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DYE50_06700 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D DYE50_11235 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tri00410]
D DYE50_02940 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DYE50_02960 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D DYE50_02985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:tri00440]
D DYE50_04590 aepX; phosphoenolpyruvate mutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D DYE50_04585 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D DYE50_04580 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DYE50_09300 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:tri00450]
D DYE50_08610 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D DYE50_08600 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DYE50_01025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DYE50_03165 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DYE50_01060 FAD-binding protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DYE50_04885 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tri00460]
D DYE50_11250 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_08755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_08680 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D DYE50_10720 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tri00470]
D DYE50_06755 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_08690 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DYE50_01120 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DYE50_09420 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DYE50_01115 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DYE50_06155 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D DYE50_09505 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:tri00480]
D DYE50_08705 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D DYE50_09830 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DYE50_11140 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D DYE50_01065 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D DYE50_10660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tri00511]
D DYE50_11440 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tri00542]
D DYE50_04475 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tri00541]
D DYE50_04660 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DYE50_04665 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DYE50_04755 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DYE50_04765 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DYE50_04760 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_05725 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_04770 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DYE50_06285 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D DYE50_09490 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_06360 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DYE50_06355 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DYE50_09425 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00550 Peptidoglycan biosynthesis [PATH:tri00550]
D DYE50_02305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DYE50_10775 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DYE50_04480 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DYE50_01115 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DYE50_01120 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DYE50_03370 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DYE50_05050 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DYE50_04490 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DYE50_08115 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DYE50_07395 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DYE50_06630 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DYE50_08360 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DYE50_08395 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:tri00552]
D DYE50_04475 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DYE50_02275 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D DYE50_08010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tri00543]
D DYE50_04475 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DYE50_04640 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DYE50_02405 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tri00730]
D DYE50_04415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DYE50_07995 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DYE50_11015 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DYE50_08055 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DYE50_10050 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DYE50_00995 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D DYE50_01075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tri00740]
D DYE50_06210 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D DYE50_11805 hypothetical protein K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
C 00750 Vitamin B6 metabolism [PATH:tri00750]
D DYE50_05850 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DYE50_10945 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DYE50_10840 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D DYE50_06765 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DYE50_00270 pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D DYE50_00275 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tri00760]
D DYE50_12295 DUF108 domain-containing protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D DYE50_10010 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DYE50_09445 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DYE50_08605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DYE50_04275 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DYE50_12280 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DYE50_09100 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DYE50_09565 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DYE50_10265 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DYE50_11155 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DYE50_12385 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DYE50_00555 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DYE50_08290 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DYE50_09915 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DYE50_00135 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DYE50_00140 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DYE50_00130 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:tri00770]
D DYE50_03470 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_06935 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DYE50_11630 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DYE50_08245 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DYE50_11950 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DYE50_03450 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DYE50_02965 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DYE50_00485 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DYE50_02960 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DYE50_02945 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DYE50_02950 hypothetical protein K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D DYE50_02955 flavoprotein K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D DYE50_05085 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DYE50_03125 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DYE50_08035 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DYE50_02155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DYE50_02940 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tri00780]
D DYE50_02105 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DYE50_10850 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02120 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_08410 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02115 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_03725 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08415 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DYE50_09460 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D DYE50_09470 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DYE50_09475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DYE50_09465 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DYE50_11185 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:tri00790]
D DYE50_01100 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D DYE50_08180 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DYE50_08050 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DYE50_00150 dihydrofolate reductase K18590 dfrA12; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D DYE50_06750 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DYE50_10215 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DYE50_07325 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DYE50_05700 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:tri00670]
D DYE50_00150 dihydrofolate reductase K18590 dfrA12; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D DYE50_08545 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DYE50_01095 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DYE50_10720 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DYE50_10240 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DYE50_10910 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DYE50_01500 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DYE50_01025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DYE50_10685 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D DYE50_01035 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DYE50_11410 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tri00860]
D DYE50_02815 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DYE50_03175 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DYE50_02160 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tri00130]
D DYE50_05800 flavodoxin family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tri00900]
D DYE50_11015 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DYE50_08055 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DYE50_05040 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DYE50_09125 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DYE50_04550 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DYE50_07820 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DYE50_05050 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DYE50_02040 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:tri00903]
D DYE50_08475 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DYE50_02250 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tri00523]
D DYE50_04755 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DYE50_04765 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DYE50_04760 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_05725 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_04770 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:tri01054]
D DYE50_06155 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:tri01055]
D DYE50_00095 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DYE50_04765 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tri00946]
D DYE50_11250 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_08755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:tri00261]
D DYE50_00095 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DYE50_12440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_08895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DYE50_11450 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DYE50_09450 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DYE50_09455 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DYE50_08910 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tri00521]
D DYE50_10180 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_10185 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DYE50_04755 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DYE50_04765 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DYE50_04760 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_05725 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DYE50_04770 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:tri00525]
D DYE50_04755 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DYE50_04765 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:tri00401]
D DYE50_11235 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DYE50_02360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DYE50_08400 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DYE50_02115 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_03725 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:tri00998]
D DYE50_05095 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DYE50_04590 aepX; phosphoenolpyruvate mutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D DYE50_04585 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tri00999]
D DYE50_00695 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DYE50_02355 type I 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D DYE50_11250 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DYE50_08755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tri00362]
D DYE50_01975 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DYE50_08970 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tri00625]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D DYE50_11030 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_11055 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_11125 hydrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D DYE50_08620 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D DYE50_11035 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DYE50_11060 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D DYE50_11120 nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D DYE50_01975 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation [PATH:tri00791]
D DYE50_00045 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D DYE50_00005 ATP-grasp domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
D DYE50_08475 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D DYE50_01975 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:tri00626]
D DYE50_11600 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tri03020]
D DYE50_02455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DYE50_02460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DYE50_02605 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DYE50_08060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tri03010]
D DYE50_09510 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D DYE50_05065 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DYE50_02515 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DYE50_10165 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DYE50_02570 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DYE50_04825 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DYE50_02470 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DYE50_02555 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DYE50_02480 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DYE50_02600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DYE50_02465 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DYE50_02595 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DYE50_02550 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DYE50_03660 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DYE50_09740 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DYE50_02530 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DYE50_04835 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DYE50_02505 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DYE50_04520 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DYE50_10740 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DYE50_02440 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DYE50_02500 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DYE50_02485 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DYE50_02490 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DYE50_02545 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DYE50_02560 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DYE50_02450 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DYE50_04840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DYE50_02445 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DYE50_02435 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DYE50_02535 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DYE50_02580 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DYE50_02520 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DYE50_02610 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DYE50_02565 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DYE50_09760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DYE50_09980 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DYE50_09080 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DYE50_02510 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DYE50_02495 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DYE50_02540 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DYE50_06260 hypothetical protein K02895 RP-L24; large subunit ribosomal protein L24
D DYE50_09140 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DYE50_09090 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DYE50_10325 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DYE50_02525 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DYE50_02575 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DYE50_05105 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DYE50_05090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DYE50_02415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DYE50_00200 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DYE50_09985 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DYE50_02590 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DYE50_03140 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DYE50_03145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tri00970]
D DYE50_11445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DYE50_09940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DYE50_04515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DYE50_03900 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DYE50_03905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DYE50_03925 tRNA-His K14226 tRNA-His; tRNA His
D DYE50_03910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DYE50_09005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_09010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_12495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_01870 tRNA-Met K14230 tRNA-Met; tRNA Met
D DYE50_04465 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DYE50_04470 tRNA-Val K14237 tRNA-Val; tRNA Val
D DYE50_06930 tRNA-Val K14237 tRNA-Val; tRNA Val
D DYE50_02815 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DYE50_10385 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DYE50_10355 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DYE50_10390 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DYE50_09365 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DYE50_08335 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DYE50_07150 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DYE50_10780 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DYE50_04885 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DYE50_01500 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DYE50_11545 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DYE50_11280 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DYE50_07760 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DYE50_02885 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DYE50_10195 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DYE50_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DYE50_07265 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DYE50_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DYE50_00075 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DYE50_07400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DYE50_06740 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tri03060]
D DYE50_02585 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DYE50_02425 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DYE50_08800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DYE50_07835 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DYE50_07830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DYE50_07840 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DYE50_00185 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DYE50_03180 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DYE50_07805 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DYE50_07520 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DYE50_06950 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DYE50_07700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DYE50_08365 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tri04122]
D DYE50_04415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DYE50_04865 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DYE50_07995 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tri03018]
D DYE50_05120 ATP-dependent helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DYE50_03665 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DYE50_07125 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DYE50_04540 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DYE50_10520 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DYE50_11620 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DYE50_04870 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tri03030]
D DYE50_10175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DYE50_04500 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DYE50_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DYE50_04845 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DYE50_06670 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tri03410]
D DYE50_00700 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DYE50_08020 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_08070 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tri03420]
D DYE50_06780 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DYE50_10025 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D DYE50_11395 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DYE50_10400 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_08120 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tri03430]
D DYE50_09890 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DYE50_10055 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DYE50_07045 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D DYE50_10400 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_08120 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_07035 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DYE50_07040 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DYE50_08070 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DYE50_04500 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DYE50_10175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DYE50_05460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tri03440]
D DYE50_08070 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_00215 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DYE50_08085 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DYE50_08185 recA; recombinase RecA K03553 recA; recombination protein RecA
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_03255 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DYE50_03250 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DYE50_03860 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DYE50_01605 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DYE50_01660 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DYE50_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DYE50_04500 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DYE50_10175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DYE50_08015 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:tri03250]
D DYE50_00170 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tri02010]
D DYE50_11000 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_02075 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_11020 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D DYE50_11005 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DYE50_12020 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DYE50_02340 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DYE50_12025 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D DYE50_02335 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D DYE50_12030 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DYE50_02325 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DYE50_12450 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_09055 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_03690 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_07055 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_09200 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_03695 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_09195 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_03700 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_09190 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_12065 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DYE50_05670 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DYE50_12060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D DYE50_12055 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D DYE50_08865 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D DYE50_08870 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D DYE50_08875 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D DYE50_10855 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12175 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12210 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_00790 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12165 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_12200 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_00780 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_12170 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_12205 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_00785 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_09250 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D DYE50_09255 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D DYE50_08765 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D DYE50_09260 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D DYE50_08770 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D DYE50_10300 ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D DYE50_10290 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D DYE50_10295 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_07575 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DYE50_07585 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DYE50_07580 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DYE50_08920 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D DYE50_08935 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D DYE50_08940 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D DYE50_08930 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DYE50_10320 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DYE50_10960 LacI family transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D DYE50_10305 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein
D DYE50_06775 adhesin K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D DYE50_11110 L-cystine-binding protein TcyK K16957 tcyK; L-cystine transport system substrate-binding protein
D DYE50_11105 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D DYE50_11100 ABC transporter permease subunit K16959 tcyM; L-cystine transport system permease protein
D DYE50_11095 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DYE50_07220 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_08710 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_07225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_08715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_07230 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_08720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_07235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_08725 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_07240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_08730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_04180 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D DYE50_04190 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D DYE50_04140 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D DYE50_04135 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D DYE50_02145 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D DYE50_12120 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DYE50_00080 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DYE50_12130 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D DYE50_12125 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DYE50_04260 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D DYE50_04250 hypothetical protein K16783 bioN; biotin transport system permease protein
D DYE50_04255 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D DYE50_07500 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D DYE50_07510 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D DYE50_07505 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DYE50_03715 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D DYE50_03720 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D DYE50_10525 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DYE50_11920 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DYE50_03975 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DYE50_11915 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DYE50_03970 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS)
D DYE50_10815 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DYE50_03275 helix-turn-helix domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DYE50_08805 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tri03070]
D DYE50_07030 hypothetical protein K02453 gspD; general secretion pathway protein D
D DYE50_07015 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D DYE50_07025 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DYE50_07835 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DYE50_07830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DYE50_02425 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DYE50_08800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DYE50_02585 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DYE50_07840 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DYE50_00185 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DYE50_03180 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DYE50_07520 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DYE50_07805 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DYE50_11375 hypothetical protein K12342 yadB_C; adhesin YadB/C
D DYE50_11730 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tri02020]
D DYE50_09075 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D DYE50_04085 flagellin K02406 fliC; flagellin
D DYE50_04090 flagellin K02406 fliC; flagellin
D DYE50_07615 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D DYE50_07685 motility protein A K02556 motA; chemotaxis protein MotA
D DYE50_11970 Tat pathway signal protein K07793 tctA; putative tricarboxylic transport membrane protein
D DYE50_11965 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D DYE50_11960 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D DYE50_00225 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D DYE50_02235 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D DYE50_02230 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D DYE50_04505 PAS domain S-box protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D DYE50_00585 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DYE50_04045 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_08155 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein
D DYE50_09655 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_10540 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_09625 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09630 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_11285 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_00370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03245 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05695 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_07050 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09905 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DYE50_09660 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10235 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_08925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_09650 response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10230 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D DYE50_08905 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DYE50_12050 hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D DYE50_10310 response regulator K07720 yesN; two-component system, response regulator YesN
D DYE50_12045 response regulator K07720 yesN; two-component system, response regulator YesN
D DYE50_06845 ligand-binding protein K01991 wza; polysaccharide biosynthesis/export protein
D DYE50_07880 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D DYE50_11490 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_03600 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_07215 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D DYE50_05660 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:tri04148]
D DYE50_00590 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DYE50_10660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tri02024]
D DYE50_12455 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D DYE50_02360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DYE50_11725 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D DYE50_11750 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D DYE50_11745 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D DYE50_11740 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D DYE50_11720 hypothetical protein K20531 trbF; type IV secretion system protein TrbF
D DYE50_11710 hypothetical protein K20532 trbG; type IV secretion system protein TrbG
D DYE50_11705 hypothetical protein K20533 trbI; type IV secretion system protein TrbI
D DYE50_07220 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_08710 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_07225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_08715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_07230 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_08720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_07235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_08725 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_07240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_08730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_07070 hypothetical protein K20276 bapA; large repetitive protein
D DYE50_08300 hypothetical protein K20276 bapA; large repetitive protein
D DYE50_07775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DYE50_08905 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DYE50_09595 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DYE50_02210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DYE50_09605 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DYE50_09610 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DYE50_09670 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DYE50_00185 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DYE50_02425 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DYE50_08800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DYE50_02585 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DYE50_07840 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DYE50_03180 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DYE50_07520 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DYE50_07805 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tri02030]
D DYE50_09625 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09630 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_11285 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_00370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03245 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05695 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_07050 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_10320 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DYE50_09660 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10235 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_09905 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DYE50_10220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_08925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_10225 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D DYE50_09650 response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_09655 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_10540 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_10085 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_03510 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_05245 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_06565 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_07670 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DYE50_07665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DYE50_07685 motility protein A K02556 motA; chemotaxis protein MotA
D DYE50_07680 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tri02040]
D DYE50_10095 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DYE50_10090 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DYE50_10085 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_03510 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_05245 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_06565 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_10080 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DYE50_10075 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DYE50_10070 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DYE50_10490 hypothetical protein K02415 fliL; flagellar protein FliL
D DYE50_07675 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D DYE50_07670 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DYE50_07665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DYE50_07660 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DYE50_07655 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DYE50_07650 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DYE50_07645 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DYE50_07635 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DYE50_07640 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DYE50_10105 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DYE50_10100 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DYE50_08995 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D DYE50_09000 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DYE50_07255 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DYE50_06855 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DYE50_06860 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D DYE50_04030 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DYE50_04035 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DYE50_04085 flagellin K02406 fliC; flagellin
D DYE50_04090 flagellin K02406 fliC; flagellin
D DYE50_04075 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D DYE50_10445 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D DYE50_07685 motility protein A K02556 motA; chemotaxis protein MotA
D DYE50_07680 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DYE50_06665 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DYE50_08645 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D DYE50_07615 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D DYE50_01025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tri01501]
D DYE50_10000 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_02020 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_03475 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DYE50_00910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DYE50_08115 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DYE50_06630 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DYE50_08360 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tri01502]
D DYE50_01120 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DYE50_06755 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_03370 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DYE50_04490 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tri01503]
D DYE50_04440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DYE50_09075 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D DYE50_00170 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DYE50_00910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tri01000]
C 01001 Protein kinases [BR:tri01001]
D DYE50_01505 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DYE50_04350 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DYE50_00875 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DYE50_02235 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D DYE50_04505 PAS domain S-box protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D DYE50_09660 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10235 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_12050 hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tri01009]
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:tri01002]
D DYE50_09355 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DYE50_12310 hypothetical protein K07010 K07010; putative glutamine amidotransferase
D DYE50_00765 NlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D DYE50_05150 peptidoglycan endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D DYE50_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DYE50_03615 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DYE50_02790 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DYE50_03560 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DYE50_02995 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D DYE50_04980 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D DYE50_06215 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D DYE50_03515 hypothetical protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D DYE50_09340 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DYE50_09345 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DYE50_02315 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D DYE50_09070 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DYE50_10440 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DYE50_02040 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DYE50_05035 PDZ domain-containing protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DYE50_01875 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D DYE50_09075 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D DYE50_08395 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DYE50_03890 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DYE50_04360 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DYE50_05335 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DYE50_05385 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DYE50_06950 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DYE50_07700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DYE50_08365 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DYE50_02265 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DYE50_00645 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D DYE50_00975 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D DYE50_01425 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D DYE50_03425 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DYE50_07985 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DYE50_08480 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DYE50_07335 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:tri01003]
D DYE50_08010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D DYE50_04820 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DYE50_07395 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DYE50_08115 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DYE50_02275 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D DYE50_04475 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tri01005]
D DYE50_04475 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tri01011]
D DYE50_02305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DYE50_10775 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DYE50_04480 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DYE50_01115 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DYE50_01120 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DYE50_06755 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_08745 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DYE50_09420 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DYE50_04490 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DYE50_08115 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DYE50_07395 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DYE50_06630 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DYE50_08360 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DYE50_08395 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D DYE50_00765 NlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D DYE50_05150 peptidoglycan endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D DYE50_01895 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DYE50_07860 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DYE50_06675 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DYE50_09950 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DYE50_04440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tri01004]
D DYE50_08400 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DYE50_02105 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DYE50_10850 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02120 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_08410 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DYE50_02115 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_03725 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DYE50_08415 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DYE50_02130 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DYE50_10655 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DYE50_07775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DYE50_09600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tri01008]
D DYE50_00095 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DYE50_06155 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:tri01006]
D DYE50_05050 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DYE50_04370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:tri01007]
D DYE50_02885 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DYE50_02815 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DYE50_07400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DYE50_06740 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DYE50_10780 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DYE50_10195 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DYE50_04885 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DYE50_07760 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DYE50_11545 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DYE50_11280 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DYE50_09365 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DYE50_07265 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DYE50_08335 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DYE50_07150 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DYE50_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DYE50_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DYE50_00075 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DYE50_04815 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D DYE50_07875 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DYE50_01190 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D DYE50_07970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DYE50_09470 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DYE50_08600 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DYE50_10975 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DYE50_09475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DYE50_08690 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DYE50_02155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DYE50_04580 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DYE50_10945 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DYE50_06285 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tri03000]
D DYE50_01565 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DYE50_05890 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D DYE50_00825 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DYE50_09270 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DYE50_08860 LacI family transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D DYE50_00265 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DYE50_12070 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DYE50_01050 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DYE50_12110 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DYE50_11975 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D DYE50_08905 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DYE50_00400 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DYE50_08615 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D DYE50_07305 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DYE50_12355 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D DYE50_00380 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D DYE50_01520 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DYE50_11550 transcriptional regulator K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D DYE50_08155 GAF domain-containing protein K02584 nifA; Nif-specific regulatory protein
D DYE50_02880 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D DYE50_05410 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D DYE50_08275 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DYE50_10065 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D DYE50_03015 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DYE50_04245 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D DYE50_03355 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tri03021]
D DYE50_02605 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DYE50_02455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DYE50_02460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DYE50_08060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DYE50_06665 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DYE50_08645 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D DYE50_01730 hypothetical protein K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D DYE50_10785 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DYE50_10500 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DYE50_11230 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DYE50_07615 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D DYE50_03535 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DYE50_02430 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06230 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06240 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06270 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_11330 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_02835 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_02860 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_03750 HAMP domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_05465 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_07105 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DYE50_10695 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DYE50_02870 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DYE50_07110 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D DYE50_03015 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DYE50_04540 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tri03019]
D DYE50_05100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DYE50_10520 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DYE50_05120 ATP-dependent helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DYE50_07125 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DYE50_03665 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DYE50_04540 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DYE50_11620 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DYE50_04870 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DYE50_04045 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D DYE50_10635 hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D DYE50_03755 ATP-dependent RNA helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D DYE50_00480 hypothetical protein K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome [BR:tri03041]
C 03011 Ribosome [BR:tri03011]
D DYE50_09510 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D DYE50_05065 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DYE50_02515 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DYE50_10165 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DYE50_02570 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DYE50_04825 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DYE50_02470 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DYE50_02555 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DYE50_02480 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DYE50_02600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DYE50_02465 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DYE50_02595 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DYE50_02550 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DYE50_03660 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DYE50_09740 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DYE50_02530 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DYE50_04835 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DYE50_02505 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DYE50_04520 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DYE50_10740 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DYE50_02440 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DYE50_02500 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DYE50_02485 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DYE50_02490 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DYE50_02545 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DYE50_02560 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DYE50_04840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DYE50_02445 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DYE50_02435 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DYE50_02450 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DYE50_02535 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DYE50_02580 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DYE50_02520 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DYE50_02610 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DYE50_02565 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DYE50_09760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DYE50_09980 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DYE50_09080 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DYE50_02510 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DYE50_02495 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DYE50_02540 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DYE50_06260 hypothetical protein K02895 RP-L24; large subunit ribosomal protein L24
D DYE50_09090 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DYE50_10325 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DYE50_02525 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DYE50_02575 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DYE50_05105 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DYE50_05090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DYE50_02415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DYE50_00200 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DYE50_09985 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DYE50_02590 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DYE50_09140 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DYE50_03140 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DYE50_03145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tri03009]
D DYE50_05100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DYE50_02345 GTPase Era K03595 era; GTPase
D DYE50_09095 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D DYE50_03015 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D DYE50_03535 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DYE50_02430 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06230 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06240 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_06270 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D DYE50_08665 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D DYE50_04790 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DYE50_05020 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DYE50_02270 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DYE50_03360 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DYE50_07920 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DYE50_00800 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DYE50_10515 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DYE50_04365 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DYE50_07320 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D DYE50_05115 rRNA (guanine-N2)-methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D DYE50_08465 SAM-dependent methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D DYE50_05005 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DYE50_04860 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DYE50_08565 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DYE50_08165 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DYE50_03195 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DYE50_07245 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DYE50_09685 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DYE50_00735 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DYE50_04800 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DYE50_04805 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DYE50_09750 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DYE50_10425 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DYE50_07125 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DYE50_10050 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DYE50_10485 hflX; GTPase HflX K03665 hflX; GTPase
D DYE50_07715 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DYE50_08495 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DYE50_03545 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D DYE50_03530 ribosome maturation factor K09748 rimP; ribosome maturation factor RimP
D DYE50_09115 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D DYE50_07555 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D DYE50_00065 ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D DYE50_03100 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:tri03016]
D DYE50_04910 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D DYE50_06710 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DYE50_05195 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DYE50_05295 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DYE50_02815 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DYE50_00865 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DYE50_07760 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DYE50_11280 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DYE50_04885 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DYE50_10195 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DYE50_09365 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DYE50_08335 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DYE50_07150 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DYE50_10780 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DYE50_11545 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DYE50_07265 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DYE50_00990 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DYE50_00075 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DYE50_07400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DYE50_06740 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DYE50_09995 RsmB/NOP family class I SAM-dependent RNA methyltransferase K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.-]
D DYE50_07185 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DYE50_08025 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DYE50_03655 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DYE50_04415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DYE50_07715 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DYE50_04370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DYE50_02775 trmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DYE50_00195 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DYE50_09060 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D DYE50_00575 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D DYE50_02885 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DYE50_10900 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D DYE50_00610 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DYE50_00930 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DYE50_01005 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DYE50_10130 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DYE50_02285 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D DYE50_09755 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DYE50_08565 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DYE50_04865 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DYE50_12340 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DYE50_04355 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DYE50_03240 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DYE50_10215 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DYE50_07325 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DYE50_00355 recombinase K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DYE50_03730 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DYE50_07995 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DYE50_09145 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DYE50_04050 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DYE50_08635 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DYE50_04055 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DYE50_05435 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D DYE50_03665 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DYE50_10580 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DYE50_01020 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tri03012]
D DYE50_03540 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DYE50_09990 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DYE50_05060 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DYE50_02475 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DYE50_03110 elongation factor G K02355 fusA; elongation factor G
D DYE50_09015 fusA; elongation factor G K02355 fusA; elongation factor G
D DYE50_05055 ribosome recycling factor K02838 frr; ribosome recycling factor
D DYE50_03020 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DYE50_11350 efp; elongation factor P K02356 efp; elongation factor P
D DYE50_07530 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DYE50_01595 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
D DYE50_01640 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tri03110]
D DYE50_10160 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DYE50_07405 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DYE50_03885 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DYE50_03430 ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DYE50_11620 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DYE50_11615 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DYE50_03025 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D DYE50_10715 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D DYE50_11625 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D DYE50_02240 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DYE50_09075 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D DYE50_10440 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DYE50_00170 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DYE50_01995 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D DYE50_00545 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:tri04131]
D DYE50_07815 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DYE50_08750 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DYE50_00325 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:tri03051]
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tri03032]
D DYE50_01565 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DYE50_00225 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DYE50_04845 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DYE50_01835 AAA family ATPase K02315 dnaC; DNA replication protein DnaC
D DYE50_06670 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DYE50_10175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DYE50_04500 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DYE50_04405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DYE50_05460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DYE50_00260 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DYE50_00255 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DYE50_10615 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DYE50_10610 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DYE50_03410 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tri03036]
D DYE50_01565 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DYE50_05100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DYE50_00225 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DYE50_07130 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D DYE50_08175 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D DYE50_08170 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D DYE50_03385 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DYE50_08360 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DYE50_00625 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DYE50_03365 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D DYE50_03380 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D DYE50_03375 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DYE50_03390 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DYE50_04440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DYE50_00910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DYE50_06645 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DYE50_06640 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DYE50_06635 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D DYE50_06625 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D DYE50_06145 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D DYE50_08280 ParA family protein K03496 parA; chromosome partitioning protein
D DYE50_08275 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DYE50_10615 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DYE50_10610 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DYE50_03415 recombinase XerC K03733 xerC; integrase/recombinase XerC
D DYE50_07385 integrase K03733 xerC; integrase/recombinase XerC
D DYE50_03395 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D DYE50_07380 hypothetical protein K04763 xerD; integrase/recombinase XerD
D DYE50_07440 winged helix-turn-helix transcriptional regulator K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DYE50_07415 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DYE50_05440 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DYE50_04920 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:tri03400]
D DYE50_00700 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DYE50_00060 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DYE50_01540 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DYE50_05790 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DYE50_06090 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DYE50_07275 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DYE50_03710 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DYE50_08020 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DYE50_08070 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DYE50_07180 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DYE50_03130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DYE50_10025 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D DYE50_11395 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DYE50_10400 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_08120 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DYE50_02455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DYE50_02460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DYE50_02605 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DYE50_08060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DYE50_06780 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DYE50_09890 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DYE50_10055 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DYE50_07045 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D DYE50_07035 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DYE50_07040 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DYE50_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DYE50_10175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DYE50_04500 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_05460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DYE50_01585 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D DYE50_08185 recA; recombinase RecA K03553 recA; recombination protein RecA
D DYE50_03255 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DYE50_03250 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DYE50_03860 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DYE50_01445 RusA family crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D DYE50_08015 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DYE50_04300 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D DYE50_04290 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D DYE50_02400 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DYE50_00215 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DYE50_01605 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DYE50_01660 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DYE50_08085 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DYE50_09920 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DYE50_06460 DNA helicase UvrD K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D DYE50_00260 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DYE50_00255 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DYE50_03410 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DYE50_12490 DNA repair protein K03502 umuC; DNA polymerase V
D DYE50_05370 DNA methylase K03502 umuC; DNA polymerase V
D DYE50_06590 SOS mutagenesis and repair protein UmuC K03502 umuC; DNA polymerase V
D DYE50_04460 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D DYE50_12160 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DYE50_04110 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tri03029]
D DYE50_03540 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DYE50_09990 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DYE50_05060 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DYE50_02475 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DYE50_03110 elongation factor G K02355 fusA; elongation factor G
D DYE50_09015 fusA; elongation factor G K02355 fusA; elongation factor G
D DYE50_02345 GTPase Era K03595 era; GTPase
D DYE50_07400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DYE50_11280 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DYE50_08335 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DYE50_10195 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DYE50_10385 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DYE50_10355 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DYE50_10390 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DYE50_09995 RsmB/NOP family class I SAM-dependent RNA methyltransferase K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.-]
D DYE50_02050 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D DYE50_08675 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D DYE50_11780 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_04830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_07980 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DYE50_09880 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DYE50_11620 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DYE50_11625 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D DYE50_11615 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DYE50_03025 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D DYE50_04415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DYE50_00185 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tri02000]
D DYE50_11920 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DYE50_03975 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DYE50_11915 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DYE50_03970 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DYE50_00425 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D DYE50_11000 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_02075 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DYE50_11020 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D DYE50_11005 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DYE50_12020 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DYE50_02340 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DYE50_12025 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D DYE50_02335 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D DYE50_12030 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DYE50_02325 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DYE50_11040 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DYE50_11075 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DYE50_11400 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DYE50_00020 aliphatic sulfonates ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DYE50_02185 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DYE50_11045 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DYE50_00015 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DYE50_02180 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DYE50_00010 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D DYE50_12450 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_09055 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_03690 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_07055 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_09200 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DYE50_03695 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_09195 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_03700 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_09190 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DYE50_12065 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DYE50_05670 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DYE50_12060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D DYE50_12055 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D DYE50_08865 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D DYE50_08870 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D DYE50_08875 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D DYE50_09250 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D DYE50_09255 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D DYE50_08765 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D DYE50_09260 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D DYE50_08770 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D DYE50_10855 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12175 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12210 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_00790 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D DYE50_12165 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_12200 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_00780 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D DYE50_12170 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_12205 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_00785 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D DYE50_10305 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein
D DYE50_10300 ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D DYE50_10290 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D DYE50_10295 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DYE50_10320 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D DYE50_10960 LacI family transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D DYE50_00855 extracellular solute-binding protein K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D DYE50_00845 sugar ABC transporter permease K25671 fusC; fructooligosaccharide transport system permease protein
D DYE50_00850 carbohydrate ABC transporter permease K25672 fusB; fructooligosaccharide transport system permease protein
D DYE50_08920 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D DYE50_08935 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D DYE50_08940 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D DYE50_08930 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DYE50_07575 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DYE50_07585 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DYE50_07580 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DYE50_06775 adhesin K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D DYE50_11110 L-cystine-binding protein TcyK K16957 tcyK; L-cystine transport system substrate-binding protein
D DYE50_11105 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D DYE50_11100 ABC transporter permease subunit K16959 tcyM; L-cystine transport system permease protein
D DYE50_11095 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DYE50_07220 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_08710 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DYE50_07225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_08715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D DYE50_07230 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_08720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D DYE50_07235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_08725 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DYE50_07240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_08730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DYE50_04180 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D DYE50_04190 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D DYE50_04140 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D DYE50_04135 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D DYE50_02145 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D DYE50_08265 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DYE50_08555 sugar ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DYE50_02830 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DYE50_08260 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DYE50_02825 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DYE50_08255 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DYE50_10120 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DYE50_04230 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DYE50_08420 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DYE50_10115 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DYE50_04215 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DYE50_04220 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DYE50_08425 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DYE50_10110 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DYE50_04225 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DYE50_08430 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DYE50_09595 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DYE50_02210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DYE50_09605 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DYE50_09610 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DYE50_09670 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DYE50_12120 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DYE50_00080 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DYE50_12130 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D DYE50_12125 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DYE50_04260 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D DYE50_04250 hypothetical protein K16783 bioN; biotin transport system permease protein
D DYE50_04255 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D DYE50_03715 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D DYE50_03720 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D DYE50_10525 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DYE50_10565 ABC transporter K25151 gldF; gliding motility-associated transport system permease protein
D DYE50_04970 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D DYE50_04965 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D DYE50_10570 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D DYE50_10560 ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component
D DYE50_07500 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D DYE50_07510 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D DYE50_07505 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DYE50_10915 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D DYE50_10920 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D DYE50_10925 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D DYE50_10990 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DYE50_04730 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DYE50_10985 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DYE50_04750 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DYE50_09840 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DYE50_00710 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_00285 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_10890 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_12425 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_03295 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_11905 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_03585 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_12435 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_12080 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_11635 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_11190 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_03095 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_12615 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DYE50_10815 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DYE50_03275 helix-turn-helix domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DYE50_08805 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DYE50_05630 ion transporter K10716 kch; voltage-gated potassium channel
D DYE50_08900 hypothetical protein K10716 kch; voltage-gated potassium channel
D DYE50_03650 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D DYE50_03045 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DYE50_03050 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DYE50_06970 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D DYE50_07685 motility protein A K02556 motA; chemotaxis protein MotA
D DYE50_07680 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DYE50_11210 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D DYE50_11200 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D DYE50_07930 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D DYE50_05155 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D DYE50_12485 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D DYE50_06845 ligand-binding protein K01991 wza; polysaccharide biosynthesis/export protein
D DYE50_09880 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DYE50_10530 organic solvent tolerance protein OstA K09774 lptA; lipopolysaccharide export system protein LptA
D DYE50_07550 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein
D DYE50_07885 sugar:sodium symporter K11104 melB; melibiose permease
D DYE50_03930 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D DYE50_00450 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D DYE50_09675 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D DYE50_02320 sodium:proton exchanger K26730 napA; Na+:H+ antiporter
D DYE50_02200 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D DYE50_02205 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D DYE50_01525 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D DYE50_09435 chromate transporter K07240 chrA; chromate transporter
D DYE50_09440 chromate transporter K07240 chrA; chromate transporter
D DYE50_12465 chromate transporter K07240 chrA; chromate transporter
D DYE50_12470 chromate transporter K07240 chrA; chromate transporter
D DYE50_09295 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D DYE50_01510 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D DYE50_05600 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D DYE50_10190 AEC family transporter K24180 mleP; malate permease and related proteins
D DYE50_12390 AEC family transporter K24180 mleP; malate permease and related proteins
D DYE50_06205 branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump
D DYE50_10035 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D DYE50_10030 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D DYE50_06200 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D DYE50_11970 Tat pathway signal protein K07793 tctA; putative tricarboxylic transport membrane protein
D DYE50_11965 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D DYE50_11960 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D DYE50_07330 VUT family protein K09125 yhhQ; queuosine precursor transporter
D DYE50_03375 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DYE50_11195 energy transducer TonB K03832 tonB; periplasmic protein TonB
D DYE50_08970 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D DYE50_08965 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D DYE50_08960 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D DYE50_06975 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D DYE50_00910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DYE50_08225 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:tri02044]
D DYE50_07030 hypothetical protein K02453 gspD; general secretion pathway protein D
D DYE50_07025 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DYE50_07015 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D DYE50_10230 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D DYE50_07725 hypothetical protein K08086 fimV; pilus assembly protein FimV
D DYE50_06770 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DYE50_06925 competence protein ComFB K02241 comFB; competence protein ComFB
D DYE50_07635 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DYE50_07640 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DYE50_09770 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D DYE50_10090 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DYE50_10080 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DYE50_10075 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DYE50_07665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DYE50_07660 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DYE50_07655 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DYE50_07650 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DYE50_07645 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DYE50_11730 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D DYE50_11725 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D DYE50_11750 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D DYE50_11745 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D DYE50_11720 hypothetical protein K20531 trbF; type IV secretion system protein TrbF
D DYE50_11710 hypothetical protein K20532 trbG; type IV secretion system protein TrbG
D DYE50_11705 hypothetical protein K20533 trbI; type IV secretion system protein TrbI
D DYE50_11740 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D DYE50_11375 hypothetical protein K12342 yadB_C; adhesin YadB/C
D DYE50_03180 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DYE50_07835 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DYE50_02425 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DYE50_07830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DYE50_08800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DYE50_02585 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DYE50_07805 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DYE50_07520 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DYE50_07840 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DYE50_00185 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tri02042]
C 02022 Two-component system [BR:tri02022]
D DYE50_02235 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D DYE50_02230 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D DYE50_04505 PAS domain S-box protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D DYE50_09660 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10235 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_08925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_09650 response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_12050 hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D DYE50_10310 response regulator K07720 yesN; two-component system, response regulator YesN
D DYE50_12045 response regulator K07720 yesN; two-component system, response regulator YesN
D DYE50_05660 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
C 02035 Bacterial motility proteins [BR:tri02035]
D DYE50_09660 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_10235 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DYE50_09905 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DYE50_10225 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D DYE50_09655 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_10540 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DYE50_09650 response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DYE50_10220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_08925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DYE50_09625 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09630 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_09635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_11285 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_00370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_01985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_02620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03245 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_03420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_05695 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_07050 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DYE50_10080 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DYE50_10075 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DYE50_10070 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DYE50_07660 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DYE50_07655 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DYE50_07650 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DYE50_07645 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DYE50_07635 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DYE50_07640 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DYE50_10085 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_03510 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DYE50_05245 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_06565 hypothetical protein K02410 fliG; flagellar motor switch protein FliG
D DYE50_07670 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DYE50_07665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DYE50_10090 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DYE50_10490 hypothetical protein K02415 fliL; flagellar protein FliL
D DYE50_07675 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D DYE50_10095 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DYE50_10105 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DYE50_10100 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DYE50_08995 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D DYE50_07255 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DYE50_06855 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DYE50_06860 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D DYE50_09000 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DYE50_04030 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DYE50_04035 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DYE50_12305 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D DYE50_04085 flagellin K02406 fliC; flagellin
D DYE50_04090 flagellin K02406 fliC; flagellin
D DYE50_04075 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D DYE50_10445 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D DYE50_07615 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D DYE50_07685 motility protein A K02556 motA; chemotaxis protein MotA
D DYE50_07680 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DYE50_04040 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D DYE50_04080 hypothetical protein K06603 flaG; flagellar protein FlaG
D DYE50_08985 flagellar protein FlbB K02383 flbB; flagellar protein FlbB
D DYE50_07690 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D DYE50_07630 AAA family ATPase K02404 flhF; flagellar biosynthesis protein FlhF
D DYE50_02260 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D DYE50_07625 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D DYE50_10230 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tri04812]
D DYE50_06645 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DYE50_03390 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DYE50_03385 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DYE50_06145 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D DYE50_08280 ParA family protein K03496 parA; chromosome partitioning protein
D DYE50_08275 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tri04147]
D DYE50_00525 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DYE50_04020 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DYE50_08750 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DYE50_08790 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DYE50_00170 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DYE50_11620 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DYE50_09810 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DYE50_02475 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DYE50_01960 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_04145 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DYE50_07775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DYE50_01075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DYE50_11240 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DYE50_10125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DYE50_11560 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DYE50_03680 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_04270 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DYE50_10380 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DYE50_03550 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DYE50_10940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DYE50_10910 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DYE50_02040 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DYE50_08795 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DYE50_00325 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tri02048]
D DYE50_07535 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D DYE50_08240 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DYE50_04150 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DYE50_04915 restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DYE50_07410 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DYE50_04170 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DYE50_04930 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DYE50_07430 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DYE50_10365 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DYE50_04175 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DYE50_04960 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DYE50_06585 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DYE50_07445 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DYE50_05450 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D DYE50_05455 restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D DYE50_05460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DYE50_00160 DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DYE50_10865 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D DYE50_05445 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D DYE50_01565 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DYE50_06490 type III restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DYE50_06485 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DYE50_01275 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D DYE50_01940 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D DYE50_01570 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D DYE50_06445 endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D DYE50_00875 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DYE50_10580 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DYE50_01020 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DYE50_03390 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DYE50_06645 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DYE50_10615 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DYE50_10610 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DYE50_02815 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DYE50_04415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tri01504]
D DYE50_06120 aminoglycoside N(3)-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D DYE50_06160 GNAT family N-acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D DYE50_09675 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D DYE50_05575 antibiotic acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D DYE50_06315 antibiotic acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D DYE50_05920 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D DYE50_00150 dihydrofolate reductase K18590 dfrA12; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D DYE50_10690 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D DYE50_00910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tri03100]
D DYE50_11445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DYE50_09940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DYE50_04515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DYE50_03900 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DYE50_03905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DYE50_03925 tRNA-His K14226 tRNA-His; tRNA His
D DYE50_03910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DYE50_09005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_09010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_12495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DYE50_01870 tRNA-Met K14230 tRNA-Met; tRNA Met
D DYE50_04465 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DYE50_04470 tRNA-Val K14237 tRNA-Val; tRNA Val
D DYE50_06930 tRNA-Val K14237 tRNA-Val; tRNA Val
D DYE50_03140 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DYE50_03145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DYE50_00885 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D DYE50_11150 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D DYE50_00300 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D DYE50_08340 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D DYE50_04185 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DYE50_11945 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DYE50_01435 hypothetical protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D DYE50_01460 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D DYE50_10955 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DYE50_10825 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DYE50_06075 N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D DYE50_06105 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D DYE50_04265 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DYE50_04530 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DYE50_05620 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D DYE50_02025 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D DYE50_02255 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DYE50_10280 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DYE50_07790 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D DYE50_01220 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D DYE50_08045 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D DYE50_07465 hypothetical protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D DYE50_01600 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DYE50_06395 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DYE50_12040 alpha/beta hydrolase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D DYE50_00745 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DYE50_02170 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DYE50_07560 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D DYE50_12225 sulfatase YidJ K01133 betC; choline-sulfatase [EC:3.1.6.6]
D DYE50_12215 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D DYE50_09805 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DYE50_00935 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DYE50_04380 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DYE50_00070 1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D DYE50_04320 glycosyl hydrolase family 53 K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D DYE50_09225 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D DYE50_12220 glucoronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D DYE50_11990 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D DYE50_01495 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DYE50_02215 xylanase deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D DYE50_05605 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DYE50_03065 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DYE50_00730 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DYE50_06890 hypothetical protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D DYE50_06895 hypothetical protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D DYE50_06870 4Fe-4S dicluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D DYE50_05415 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D DYE50_12360 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D DYE50_00375 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D DYE50_09815 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D DYE50_11025 hypothetical protein K02596 nifX; nitrogen fixation protein NifX
D DYE50_11180 radical SAM protein K02585 nifB; nitrogen fixation protein NifB
D DYE50_12240 flavodoxin K03839 fldA; flavodoxin I
D DYE50_03935 flavodoxin K03839 fldA; flavodoxin I
D DYE50_00105 4Fe-4S binding protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DYE50_07765 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DYE50_00030 P-II family nitrogen regulator K02589 nifHD1; nitrogen regulatory protein PII 1
C 99974 Translation
C 99975 Protein processing
D DYE50_07470 DNA helicase UvrBC K19411 mcsA; protein arginine kinase activator
D DYE50_03895 tig; trigger factor K03545 tig; trigger factor
D DYE50_07705 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D DYE50_11300 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DYE50_09325 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D DYE50_09780 YraN family protein K07460 yraN; putative endonuclease
D DYE50_03405 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D DYE50_01080 AAA family ATPase K07478 ycaJ; putative ATPase
D DYE50_12245 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D DYE50_12250 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D DYE50_00680 IS3 family transposase K07497 K07497; putative transposase
D DYE50_02675 IS3 family transposase K07497 K07497; putative transposase
D DYE50_05140 IS3 family transposase K07497 K07497; putative transposase
D DYE50_06615 IS3 family transposase K07497 K07497; putative transposase
D DYE50_08305 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DYE50_00915 AcrB/AcrD/AcrF family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D DYE50_02890 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D DYE50_07170 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D DYE50_01485 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D DYE50_00180 protein jag K06346 jag; spoIIIJ-associated protein
D DYE50_09130 septation protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
D DYE50_00715 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D DYE50_07565 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D DYE50_07155 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DYE50_04495 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D DYE50_06220 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D DYE50_09845 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D DYE50_09360 hypothetical protein K07058 K07058; membrane protein
D DYE50_12005 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D DYE50_07925 hypothetical protein K06867 K06867; uncharacterized protein
D DYE50_06170 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D DYE50_04295 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D DYE50_12370 HD domain-containing protein K06950 K06950; uncharacterized protein
D DYE50_05530 HD domain-containing protein K06950 K06950; uncharacterized protein
D DYE50_09745 KH domain-containing protein K06960 K06960; uncharacterized protein
D DYE50_10870 peptidase K06973 K06973; uncharacterized protein
D DYE50_02000 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D DYE50_09695 RND transporter K07003 K07003; uncharacterized protein
D DYE50_12410 RND family transporter K07003 K07003; uncharacterized protein
D DYE50_12535 hypothetical protein K07003 K07003; uncharacterized protein
D DYE50_03955 hypothetical protein K07003 K07003; uncharacterized protein
D DYE50_03990 hypothetical protein K07003 K07003; uncharacterized protein
D DYE50_07295 RND family transporter K07003 K07003; uncharacterized protein
D DYE50_07300 RND family transporter K07003 K07003; uncharacterized protein
D DYE50_05480 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D DYE50_04335 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D DYE50_05215 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D DYE50_09370 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D DYE50_00515 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D DYE50_10200 phosphodiesterase K07095 K07095; uncharacterized protein
D DYE50_07965 serine/threonine protein phosphatase K07096 K07096; uncharacterized protein
D DYE50_04385 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D DYE50_10005 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D DYE50_01775 zinc-ribbon domain-containing protein K07126 K07126; uncharacterized protein
D DYE50_11855 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D DYE50_01580 ATP-binding protein K07133 K07133; uncharacterized protein
D DYE50_05525 ATP-binding protein K07133 K07133; uncharacterized protein
D DYE50_06265 ATP-binding protein K07133 K07133; uncharacterized protein
D DYE50_03170 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D DYE50_09050 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D DYE50_06660 nucleic acid-binding protein K07164 K07164; uncharacterized protein
D DYE50_00190 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D DYE50_07910 DUF763 domain-containing protein K09003 K09003; uncharacterized protein
D DYE50_10760 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D DYE50_07610 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D DYE50_08030 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D DYE50_09965 DUF188 domain-containing protein K09768 K09768; uncharacterized protein
D DYE50_00950 DUF327 family protein K09770 K09770; uncharacterized protein
D DYE50_06905 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D DYE50_05420 hypothetical protein K09792 K09792; uncharacterized protein
D DYE50_02805 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D DYE50_08640 hypothetical protein K09798 K09798; uncharacterized protein
D DYE50_07145 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D DYE50_00035 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D DYE50_00040 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D DYE50_00050 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D DYE50_00055 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D DYE50_06110 2-dehydropantoate 2-reductase K05967 K05967; uncharacterized protein
D DYE50_03740 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D DYE50_09085 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024