+D GENES KO
#
KEGG Orthology (KO) - Treponema sp. OMZ 838
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:trm00010]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_10255 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_02670 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JO41_05885 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_11385 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO41_03280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO41_10075 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO41_11330 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO41_03185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO41_10020 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO41_07920 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO41_06430 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_07745 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_01590 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:trm00020]
D JO41_01460 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JO41_01590 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JO41_07920 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:trm00030]
D JO41_10255 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO41_10195 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO41_11275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JO41_02395 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JO41_06910 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO41_09320 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO41_05990 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JO41_03240 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JO41_03245 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_05865 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JO41_02855 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_05885 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_02670 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:trm00040]
D JO41_10195 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO41_01770 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:trm00051]
D JO41_00345 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JO41_01770 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_02670 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JO41_05885 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_11385 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO41_06910 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO41_09320 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:trm00052]
D JO41_07745 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JO41_04155 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_00835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_05895 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_00780 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_02670 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:trm00500]
D JO41_01645 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JO41_02795 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO41_00505 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO41_03395 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JO41_09250 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D JO41_09260 neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D JO41_03805 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D JO41_04730 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JO41_05890 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JO41_03390 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_10255 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:trm00520]
D JO41_03490 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_03915 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_10580 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_08460 glycosyl hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D JO41_01535 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JO41_01530 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_00370 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D JO41_00875 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D JO41_03575 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO41_10135 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO41_03105 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JO41_03150 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D JO41_03145 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D JO41_03135 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D JO41_03110 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_04155 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_00835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_05895 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO41_10255 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO41_00345 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JO41_01645 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:trm00620]
D JO41_07920 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO41_02640 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JO41_02620 propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO41_03500 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO41_03185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO41_06710 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO41_06725 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO41_06720 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO41_06715 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO41_07015 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_06430 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO41_01200 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D JO41_07760 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JO41_00335 extradiol dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JO41_05525 lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JO41_11990 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JO41_01480 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JO41_06435 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JO41_03910 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JO41_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JO41_01460 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JO41_05735 malate dehydrogenase K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D JO41_01590 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JO41_10020 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:trm00630]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_10870 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO41_09115 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JO41_02855 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:trm00640]
D JO41_02620 propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO41_03500 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO41_02640 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JO41_08815 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JO41_06710 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO41_06725 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO41_06720 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO41_06715 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO41_06430 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:trm00650]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_02445 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JO41_02440 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D JO41_08815 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JO41_06730 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO41_09305 butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D JO41_09895 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D JO41_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JO41_09875 glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JO41_09870 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D JO41_09885 glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D JO41_09890 glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D JO41_12040 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D JO41_12000 4-hydroxybutyrate CoA-transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D JO41_12025 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D JO41_02640 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JO41_07920 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO41_05685 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D JO41_00510 isopropanol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:trm00562]
D JO41_07870 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JO41_11385 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:trm00190]
D JO41_07730 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D JO41_07725 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D JO41_07720 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D JO41_07740 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D JO41_07715 ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D JO41_07710 ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:trm00710]
D JO41_10075 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO41_03280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_05885 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JO41_11275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JO41_02395 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JO41_06910 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO41_09320 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JO41_11385 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO41_10195 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JO41_10020 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:trm00720]
D JO41_07920 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JO41_10020 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JO41_01460 fumarate hydrolyase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JO41_12025 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_06710 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO41_06725 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO41_06720 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO41_06715 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO41_05820 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JO41_11740 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JO41_03500 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO41_02620 propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:trm00680]
D JO41_10870 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_05885 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_02670 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JO41_02620 propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JO41_03500 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO41_11330 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:trm00910]
D JO41_03525 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D JO41_01245 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JO41_04085 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JO41_08500 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D JO41_01865 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:trm00061]
D JO41_06710 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JO41_06725 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JO41_06720 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JO41_06715 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JO41_01400 acyl carrier protein K02078 acpP; acyl carrier protein
D JO41_03845 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO41_03850 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JO41_03835 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO41_03840 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO41_12005 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_03830 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_06730 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO41_09800 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_11060 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10010 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:trm00071]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_08815 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JO41_09800 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_11060 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10010 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:trm00561]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_08615 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JO41_07660 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JO41_05225 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:trm00564]
D JO41_11070 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JO41_01035 FAD-binding oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JO41_08610 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JO41_07660 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JO41_05075 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JO41_11215 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JO41_05455 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JO41_10815 CDP-alcohol phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JO41_00890 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D JO41_01055 oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:trm00600]
D JO41_00780 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JO41_08460 glycosyl hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:trm00230]
D JO41_09940 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_05865 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JO41_08520 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JO41_09790 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JO41_03710 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO41_09190 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO41_05695 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JO41_03400 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JO41_11040 purine NTP phosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JO41_07585 xanthine dehydrogenase K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D JO41_07590 xanthine dehydrogenase K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D JO41_10510 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JO41_07575 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D JO41_00165 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO41_04830 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO41_10835 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JO41_11295 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JO41_10760 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JO41_00560 (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JO41_00120 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO41_10960 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO41_11810 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JO41_09990 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D JO41_07580 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D JO41_06220 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JO41_08635 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JO41_10730 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JO41_08500 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:trm00240]
D JO41_02520 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JO41_02515 aspartate carbamoyltransferase K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D JO41_02495 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JO41_02505 diguanylate cyclase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JO41_02490 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JO41_10165 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JO41_03400 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JO41_11190 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JO41_11005 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JO41_08030 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JO41_00495 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JO41_09790 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JO41_03360 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JO41_06220 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JO41_08635 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JO41_06265 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D JO41_02835 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JO41_10835 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JO41_00165 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO41_04830 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO41_12170 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JO41_02350 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JO41_09070 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JO41_08740 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JO41_03485 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D JO41_11660 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:trm00250]
D JO41_01710 asparagine synthase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D JO41_09340 aspartate aminotransferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D JO41_02830 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JO41_02520 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JO41_02515 aspartate carbamoyltransferase K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D JO41_04085 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JO41_01245 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00260 Glycine, serine and threonine metabolism [PATH:trm00260]
D JO41_05620 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO41_12175 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO41_10060 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JO41_11880 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JO41_10870 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JO41_11330 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO41_05795 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JO41_11375 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JO41_11380 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:trm00270]
D JO41_04705 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO41_06490 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JO41_02400 5'-nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JO41_04310 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D JO41_06380 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JO41_04765 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JO41_02065 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JO41_06430 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO41_09340 aspartate aminotransferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D JO41_11375 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JO41_11380 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:trm00280]
D JO41_08815 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:trm00300]
D JO41_04220 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO41_11495 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO41_08435 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JO41_01165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:trm00310]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_11500 radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:trm00220]
D JO41_08495 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JO41_08490 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D JO41_08500 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JO41_01245 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00330 Arginine and proline metabolism [PATH:trm00330]
D JO41_04750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_12430 diamine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
C 00340 Histidine metabolism [PATH:trm00340]
D JO41_07010 histidinol phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
D JO41_02445 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00380 Tryptophan metabolism [PATH:trm00380]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_04090 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:trm00400]
D JO41_01520 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JO41_11825 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JO41_02390 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D JO41_07685 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JO41_12190 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JO41_08665 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JO41_02790 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:trm00410]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JO41_11660 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JO41_08815 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:trm00430]
D JO41_01015 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JO41_01245 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JO41_03500 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JO41_02620 propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:trm00450]
D JO41_04705 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO41_08640 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JO41_03495 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JO41_00650 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JO41_02900 water kinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO41_05210 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO41_01440 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JO41_10335 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:trm00460]
D JO41_01015 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JO41_01710 asparagine synthase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:trm00470]
D JO41_09655 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JO41_03225 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO41_04915 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JO41_08515 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:trm00480]
D JO41_01015 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JO41_03900 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JO41_04750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:trm00511]
D JO41_00780 beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JO41_08460 glycosyl hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:trm00541]
D JO41_05895 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JO41_00345 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JO41_03105 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JO41_03150 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D JO41_03145 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D JO41_03135 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D JO41_03110 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:trm00550]
D JO41_03575 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO41_10135 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO41_08040 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JO41_08515 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JO41_08435 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JO41_03225 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO41_01165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JO41_11210 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JO41_04520 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JO41_10480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO41_11745 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JO41_12165 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO41_12245 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_00770 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_10715 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO41_07225 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO41_05500 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO41_05520 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:trm00552]
D JO41_04520 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JO41_04305 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JO41_05225 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:trm00543]
D JO41_10890 alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:trm00730]
D JO41_11820 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO41_01700 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JO41_07755 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JO41_04920 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JO41_10730 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:trm00740]
D JO41_09055 riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JO41_09940 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:trm00750]
D JO41_06260 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JO41_05620 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JO41_12175 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:trm00760]
D JO41_07150 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JO41_03710 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO41_09190 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JO41_09790 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JO41_09005 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JO41_03200 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JO41_10225 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D JO41_01510 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JO41_11145 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:trm00770]
D JO41_03935 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JO41_07865 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JO41_05810 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JO41_05845 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JO41_12650 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JO41_04055 4-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D JO41_11660 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:trm00780]
D JO41_03835 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO41_03840 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO41_12005 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_03830 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_12145 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:trm00790]
D JO41_01110 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JO41_12665 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
C 00670 One carbon pool by folate [PATH:trm00670]
D JO41_05820 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JO41_11740 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JO41_08935 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JO41_03485 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D JO41_05060 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:trm00900]
D JO41_07755 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JO41_11220 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JO41_03775 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JO41_09810 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JO41_03780 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JO41_10215 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JO41_11815 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_11210 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:trm00906]
D JO41_12205 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D JO41_12200 dehydrosqualene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JO41_11275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:trm00521]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_12155 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_03170 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JO41_07870 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D JO41_03845 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO41_03840 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JO41_01400 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:trm00999]
D JO41_06490 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JO41_02390 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:trm00362]
D JO41_09895 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D JO41_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JO41_09875 glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JO41_09870 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D JO41_02445 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D JO41_07015 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:trm00625]
D JO41_08820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D JO41_09885 glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D JO41_09890 glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:trm03020]
D JO41_01790 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO41_01785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO41_04355 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO41_00170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D JO41_08870 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:trm03010]
D JO41_02685 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JO41_11195 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JO41_04440 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JO41_01210 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JO41_04390 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JO41_11790 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JO41_01775 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JO41_04405 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JO41_06825 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JO41_04475 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JO41_04360 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JO41_01780 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JO41_04365 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JO41_09060 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JO41_00195 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JO41_04425 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JO41_11780 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JO41_04450 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JO41_00555 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JO41_05595 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JO41_01805 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JO41_04455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JO41_04470 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JO41_04465 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JO41_04410 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JO41_04400 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JO41_01795 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JO41_11775 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JO41_01800 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JO41_01810 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JO41_06830 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JO41_04420 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JO41_04380 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JO41_04435 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JO41_04350 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JO41_04395 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JO41_00215 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JO41_03875 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JO41_08985 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JO41_04445 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JO41_04460 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JO41_04415 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JO41_09825 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JO41_08995 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JO41_01875 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JO41_04430 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JO41_04385 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JO41_00525 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JO41_01830 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JO41_03460 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JO41_03870 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JO41_04370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JO41_05920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO41_05930 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO41_05935 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO41_10100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:trm00970]
D JO41_05910 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_07515 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_05925 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_10090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_00720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06840 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_08045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_08950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06465 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_07945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JO41_05130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JO41_04195 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JO41_07040 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO41_09820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO41_07045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO41_05950 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO41_05430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_08410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_09110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_08945 tRNA-His K14226 tRNA-His; tRNA His
D JO41_01415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_01935 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_04560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_06375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_08405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_08400 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO41_05240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO41_00180 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_00775 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_03465 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_02810 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JO41_11560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_05135 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_00490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_06455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_06460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_06480 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_02820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_01835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_07570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_01825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JO41_02815 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JO41_08660 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_00100 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_06810 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_05060 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO41_00130 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JO41_00125 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO41_04265 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO41_00135 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JO41_09765 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO41_02560 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO41_08525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JO41_05065 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO41_10065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO41_02650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO41_01440 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JO41_10145 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO41_10335 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO41_08935 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JO41_09575 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO41_00250 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO41_01275 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO41_03365 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JO41_08475 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO41_11180 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO41_02680 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO41_03630 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO41_04500 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO41_03590 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO41_07180 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:trm03060]
D JO41_04375 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO41_01820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO41_02655 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO41_03425 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO41_03420 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO41_03430 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO41_03450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO41_06845 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO41_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JO41_12525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO41_07640 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_08745 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_07230 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_07530 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:trm04122]
D JO41_11820 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO41_05200 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JO41_11030 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JO41_01700 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:trm03018]
D JO41_07925 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO41_09065 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO41_06370 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO41_09780 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO41_00530 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JO41_03005 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_07970 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO41_03530 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO41_00655 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:trm03030]
D JO41_12150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO41_09550 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO41_11755 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_10515 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_03370 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO41_05415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO41_11770 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JO41_10675 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_01515 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JO41_11100 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:trm03410]
D JO41_08060 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JO41_08025 endonuclease III K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JO41_00355 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JO41_12055 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_06270 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:trm03420]
D JO41_06545 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JO41_11335 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JO41_02895 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JO41_01675 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JO41_09290 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_03720 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JO41_08870 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:trm03430]
D JO41_02320 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JO41_06995 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D JO41_06975 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JO41_09290 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_03720 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_08700 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JO41_06970 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JO41_06270 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_09550 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO41_05415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO41_11755 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_10515 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_03370 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO41_12150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JO41_08580 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:trm03440]
D JO41_06270 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_10535 recombinase RecR K06187 recR; recombination protein RecR
D JO41_11540 recombinase RecA K03553 recA; recombination protein RecA
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_11730 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JO41_06010 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JO41_10485 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JO41_04775 DeoR faimly transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_01985 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_05770 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_09550 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO41_05415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO41_11755 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_10515 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_03370 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO41_12150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO41_00350 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:trm03250]
D JO41_03435 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:trm02010]
D JO41_04680 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO41_07885 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO41_04690 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO41_07880 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO41_04685 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_04695 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_02485 polyamine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_07875 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_00865 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JO41_00860 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D JO41_00850 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D JO41_04180 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JO41_05720 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JO41_05715 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JO41_05710 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JO41_10975 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO41_09255 ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JO41_09270 ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO41_09275 arabinogalactan ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO41_00385 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_00440 sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_01505 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_00390 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JO41_01500 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JO41_00395 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JO41_01495 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JO41_00790 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JO41_00795 protein lplB K17319 lplB; putative aldouronate transport system permease protein
D JO41_00800 ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D JO41_03270 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D JO41_02945 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D JO41_02955 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO41_03260 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO41_03255 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO41_02960 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO41_02950 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO41_03265 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO41_09570 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO41_09560 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D JO41_09565 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D JO41_09180 phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D JO41_09165 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO41_09170 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO41_09175 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D JO41_01595 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JO41_06310 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JO41_11405 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JO41_06305 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JO41_11400 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JO41_01965 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO41_01960 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D JO41_01955 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JO41_01945 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO41_03655 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JO41_06770 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JO41_04065 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JO41_11890 iron-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D JO41_11905 membrane protein K11605 sitC; manganese/iron transport system permease protein
D JO41_11915 membrane protein K11606 sitD; manganese/iron transport system permease protein
D JO41_11895 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein
D JO41_12555 biotin permease K03523 bioY; biotin transport system substrate-specific component
D JO41_12545 hypothetical protein K16783 bioN; biotin transport system permease protein
D JO41_12550 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JO41_04955 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10425 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10365 membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_01900 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_11640 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10345 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_06320 lipoprotein K10555 lsrB; AI-2 transport system substrate-binding protein
D JO41_06330 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein
D JO41_06325 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein
D JO41_06335 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D JO41_04105 basic membrane protein K23510 rfuA; riboflavin transport system substrate-binding protein
D JO41_04115 branched-chain amino acid ABC transporter permease K23511 rfuC; riboflavin transport system permease protein
D JO41_04120 ABC transporter permease K23512 rfuD; riboflavin transport system permease protein
D JO41_04110 sugar ABC transporter ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein
D JO41_12505 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D JO41_12515 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JO41_12510 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JO41_09075 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D JO41_09080 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D JO41_12070 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JO41_02540 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_04940 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_09330 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_10380 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_10775 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_11715 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_02555 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_04945 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_09335 multidrug ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_10410 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_10765 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_11720 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_04970 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO41_11690 hypothetical protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
C 02060 Phosphotransferase system (PTS) [PATH:trm02060]
D JO41_07050 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JO41_03375 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JO41_05905 PTS sucrose transporter subunit IIABC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:trm03070]
D JO41_07255 hypothetical protein K02453 gspD; general secretion pathway protein D
D JO41_03425 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO41_03420 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO41_01820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO41_02655 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO41_04375 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO41_03430 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO41_03450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO41_06845 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO41_12525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO41_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:trm02020]
D JO41_06300 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO41_07000 flagellin K02406 fliC; flagellin
D JO41_03550 flagellin K02406 fliC; flagellin
D JO41_03555 flagellin K02406 fliC; flagellin
D JO41_07130 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO41_09450 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO41_04675 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO41_06290 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JO41_06285 response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JO41_07085 [citrate (Pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D JO41_07080 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D JO41_07075 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JO41_07070 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D JO41_07055 ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D JO41_06435 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JO41_02750 carbon storage regulator K03563 csrA; carbon storage regulator
D JO41_02690 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_05145 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D JO41_10110 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO41_02705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_02710 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05830 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06015 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_08755 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09085 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09105 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09855 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_00295 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01390 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_03765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06190 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06210 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_07675 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11055 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_12485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11155 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO41_00630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO41_00615 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO41_10115 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO41_00625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D JO41_06540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_11125 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_03070 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D JO41_04035 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JO41_04750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:trm02024]
D JO41_01520 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JO41_06320 lipoprotein K10555 lsrB; AI-2 transport system substrate-binding protein
D JO41_06330 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein
D JO41_06325 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein
D JO41_06335 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D JO41_06345 autoinducer kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D JO41_06340 hypothetical protein K11531 lsrR; lsr operon transcriptional repressor
D JO41_06315 autoinducer 2 aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D JO41_02250 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D JO41_02235 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D JO41_02225 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D JO41_02215 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D JO41_02210 hypothetical protein K20531 trbF; type IV secretion system protein TrbF
D JO41_02205 hypothetical protein K20532 trbG; type IV secretion system protein TrbG
D JO41_09800 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_11060 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10010 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_06540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_11125 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_03195 tetanolysin O K11031 slo; thiol-activated cytolysin
D JO41_01965 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO41_01960 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D JO41_01955 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JO41_01945 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO41_00405 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO41_12595 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO41_12605 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO41_12600 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO41_12615 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO41_12610 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO41_03450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO41_01820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO41_02655 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO41_04375 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO41_03430 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO41_06845 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO41_12525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO41_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:trm02030]
D JO41_02705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_02710 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05830 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06015 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_08755 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09085 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09105 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09855 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_00295 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01390 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_03765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06190 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06210 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_07675 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11055 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_12485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09570 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO41_00630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO41_11155 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO41_00615 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO41_00620 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JO41_10115 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO41_10110 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO41_01350 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_11480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_09465 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO41_09470 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO41_09450 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO41_09455 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:trm02040]
D JO41_01340 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JO41_01345 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO41_01350 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_11480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_01355 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO41_01360 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO41_01365 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JO41_09460 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO41_01930 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JO41_09465 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO41_09470 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO41_09475 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D JO41_09480 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO41_09485 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO41_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO41_09495 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JO41_01330 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JO41_01335 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JO41_09435 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JO41_09440 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JO41_08875 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D JO41_08880 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JO41_08885 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D JO41_02735 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JO41_02740 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JO41_07000 flagellin K02406 fliC; flagellin
D JO41_03550 flagellin K02406 fliC; flagellin
D JO41_03555 flagellin K02406 fliC; flagellin
D JO41_03560 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D JO41_09100 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D JO41_09450 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO41_09455 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO41_04035 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JO41_10680 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO41_03685 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO41_05145 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D JO41_07130 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:trm01501]
D JO41_03490 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_03915 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_10580 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JO41_01965 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO41_01960 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D JO41_01955 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JO41_01945 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO41_04780 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D JO41_12165 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO41_10715 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO41_07225 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:trm01502]
D JO41_03225 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO41_09655 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JO41_01165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JO41_10480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO41_11745 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:trm01503]
D JO41_00575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JO41_06300 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO41_03435 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JO41_04780 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:trm01000]
C 01001 Protein kinases [BR:trm01001]
D JO41_06290 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JO41_00630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:trm01009]
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:trm01002]
D JO41_07530 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JO41_01310 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D JO41_08845 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D JO41_10510 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JO41_11065 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D JO41_10185 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D JO41_11350 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JO41_06195 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JO41_09395 CAAX protease K07052 K07052; CAAX protease family protein
D JO41_09760 abortive infection protein K07052 K07052; CAAX protease family protein
D JO41_02975 CAAX protease K07052 K07052; CAAX protease family protein
D JO41_05650 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO41_11485 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-]
D JO41_04220 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO41_11495 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JO41_07930 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JO41_03900 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JO41_05260 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JO41_10500 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JO41_11835 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JO41_11225 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JO41_06300 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO41_05500 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO41_05520 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D JO41_08720 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JO41_08420 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JO41_03030 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JO41_07640 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_08745 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_07230 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JO41_04295 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JO41_01940 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D JO41_07770 peptidase S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D JO41_01320 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JO41_01015 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JO41_01975 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JO41_06030 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JO41_00725 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D JO41_11505 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D JO41_10880 membane protease HflC K04087 hflC; modulator of FtsH protease HflC
D JO41_10875 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:trm01003]
D JO41_05225 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JO41_02795 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO41_00505 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JO41_12245 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_00770 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_12165 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO41_04305 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:trm01005]
D JO41_03080 UDP-N-acetylglucosamine 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:trm01011]
D JO41_03575 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JO41_10135 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JO41_08040 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JO41_08515 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JO41_08435 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JO41_03225 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JO41_09655 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JO41_04915 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JO41_10480 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JO41_11745 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JO41_04520 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JO41_03635 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JO41_12165 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JO41_12245 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_00770 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JO41_10715 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JO41_07225 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO41_05500 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JO41_05520 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO41_10600 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D JO41_10670 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JO41_04565 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JO41_00575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:trm01004]
D JO41_03845 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JO41_03850 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JO41_03835 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JO41_03840 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JO41_12005 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_03830 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JO41_06730 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JO41_05245 4-hydroxybenzoyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D JO41_09800 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_11060 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10010 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07660 lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:trm01006]
D JO41_11210 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JO41_12205 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 01007 Amino acid related enzymes [BR:trm01007]
D JO41_03365 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JO41_05060 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO41_03590 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO41_07180 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JO41_10145 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO41_08475 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO41_10335 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO41_01275 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO41_09575 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO41_00250 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO41_02560 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO41_08525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JO41_02680 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO41_05065 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO41_02650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO41_11180 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO41_10065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO41_09765 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO41_03630 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO41_04500 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO41_12625 aromatic amino acid aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D JO41_05795 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JO41_04705 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JO41_03145 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:trm03000]
D JO41_02065 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JO41_07605 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D JO41_00700 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JO41_07540 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JO41_09925 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JO41_06540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_11125 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JO41_05005 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JO41_05975 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D JO41_02385 Fur family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JO41_11885 transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D JO41_12145 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JO41_02690 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D JO41_00325 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D JO41_09750 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator
D JO41_03020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JO41_03770 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JO41_01845 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D JO41_05965 phage-shock protein K03973 pspC; phage shock protein C
D JO41_06340 hypothetical protein K11531 lsrR; lsr operon transcriptional repressor
D JO41_10180 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO41_10840 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D JO41_01150 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:trm03021]
D JO41_08870 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JO41_04355 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO41_01790 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO41_01785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO41_00170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JO41_10680 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO41_03685 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D JO41_10150 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JO41_05145 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D JO41_07130 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO41_09035 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JO41_04540 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JO41_01815 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO41_11360 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO41_11840 siderophore-interacting protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D JO41_11845 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D JO41_12580 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D JO41_10180 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO41_00530 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:trm03019]
D JO41_01395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JO41_03005 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JO41_07925 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D JO41_06370 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO41_09780 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO41_09065 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO41_00530 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JO41_05700 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JO41_07970 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO41_03530 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO41_00655 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JO41_02750 carbon storage regulator K03563 csrA; carbon storage regulator
D JO41_03580 DEAD/DEAH box helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:trm03011]
D JO41_02685 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JO41_11195 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JO41_04440 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JO41_01210 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JO41_04390 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JO41_11790 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JO41_01775 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JO41_04405 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JO41_06825 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JO41_04475 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JO41_04360 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JO41_01780 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JO41_04365 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JO41_09060 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JO41_00195 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JO41_04425 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JO41_11780 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JO41_04450 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JO41_00555 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JO41_05595 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JO41_01805 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JO41_04455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JO41_04470 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JO41_04465 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JO41_04410 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JO41_04400 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JO41_11775 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JO41_01800 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JO41_01810 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JO41_01795 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JO41_06830 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JO41_04420 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JO41_04380 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JO41_04435 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JO41_04350 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JO41_04395 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JO41_00215 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JO41_03875 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JO41_08985 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JO41_04445 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JO41_04460 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JO41_04415 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JO41_08995 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JO41_01875 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JO41_04430 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JO41_04385 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JO41_00525 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JO41_01830 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JO41_03460 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JO41_03870 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JO41_04370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JO41_09825 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JO41_05935 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO41_10100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO41_05920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO41_05930 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:trm03009]
D JO41_01395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JO41_02775 SAM-dependent methlyltransferase K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
D JO41_06765 GTP-binding protein Era K03595 era; GTPase
D JO41_09000 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JO41_10180 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JO41_09035 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JO41_04540 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JO41_01815 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO41_11360 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D JO41_09150 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JO41_10905 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JO41_01370 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JO41_04300 RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JO41_12140 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JO41_01155 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JO41_04040 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JO41_10285 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JO41_12495 50S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D JO41_00320 rRNA (guanine-N2)-methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D JO41_04330 SAM-dependent methlyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D JO41_08770 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JO41_05010 tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JO41_01135 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D JO41_02770 ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO41_04200 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO41_01855 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO41_10915 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JO41_10290 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D JO41_00205 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JO41_00475 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D JO41_06370 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JO41_04920 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JO41_07115 GTP-binding protein Der K03977 engA; GTPase
D JO41_09615 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JO41_11295 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JO41_09045 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D JO41_09030 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JO41_09020 iojap family protein K09710 ybeB; ribosome-associated protein
D JO41_09965 heat-shock protein K07042 ybeY; probable rRNA maturation factor
D JO41_05040 hypothetical protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:trm03016]
D JO41_00105 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JO41_08020 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JO41_05060 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO41_11180 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JO41_01275 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JO41_00250 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO41_10335 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JO41_08475 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO41_02560 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO41_09765 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JO41_08525 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JO41_05065 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO41_10065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JO41_02650 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JO41_10145 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JO41_09575 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JO41_02680 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JO41_03630 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JO41_04500 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JO41_03590 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO41_07180 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JO41_11530 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JO41_09805 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JO41_12640 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JO41_09050 tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JO41_11820 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO41_09615 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JO41_10735 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JO41_06000 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JO41_02900 water kinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO41_05210 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JO41_03455 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JO41_12915 bacterial RNase P K01978 rnpB; M1 RNA
D JO41_09530 hypothetical protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D JO41_03365 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JO41_00500 cysteinyl-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D JO41_04285 prolyl-tRNA synthetase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D JO41_01425 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JO41_05505 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JO41_07620 threonylcarbamoyladenosine tRNA methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D JO41_00210 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JO41_10290 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D JO41_04025 RNA methyltransferase TrmH K03437 spoU; RNA methyltransferase, TrmH family
D JO41_11030 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JO41_06245 arginosuccinate synthase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D JO41_05200 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JO41_01850 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JO41_01545 recombinase K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D JO41_00305 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JO41_01700 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JO41_09830 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JO41_02760 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JO41_11570 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JO41_02765 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JO41_10475 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D JO41_09065 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JO41_10490 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO41_07805 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:trm03012]
D JO41_09040 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JO41_03865 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JO41_01550 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JO41_11200 elongation factor Ts K02357 tsf; elongation factor Ts
D JO41_04480 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO41_12490 GTP-binding protein K02355 fusA; elongation factor G
D JO41_02665 fusA; elongation factor G K02355 fusA; elongation factor G
D JO41_06065 fusA; elongation factor G K02355 fusA; elongation factor G
D JO41_01445 translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D JO41_11305 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JO41_11205 ribosome recycling factor K02838 frr; ribosome recycling factor
D JO41_11300 protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JO41_11535 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JO41_10175 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JO41_05440 elongation factor P K02356 efp; elongation factor P
D JO41_02565 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D JO41_12535 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:trm03110]
D JO41_04185 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JO41_11930 Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JO41_08425 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JO41_01325 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D JO41_07970 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO41_03530 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO41_07975 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO41_01385 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D JO41_07965 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D JO41_04740 molecular chaperone Hsp20 K13993 HSP20; HSP20 family protein
D JO41_03680 molecular chaperone GroES K04078 groES; chaperonin GroES
D JO41_06300 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JO41_11835 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JO41_08460 glycosyl hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D JO41_03435 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JO41_05450 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D JO41_08980 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D JO41_08630 thioredoxin K03671 TXN; thioredoxin
D JO41_00645 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:trm04131]
D JO41_03400 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JO41_01705 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_03280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO41_11330 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JO41_03185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:trm03051]
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:trm03032]
D JO41_01515 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JO41_02065 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JO41_00550 integration host factor K05788 ihfB; integration host factor subunit beta
D JO41_04675 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO41_11770 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JO41_02050 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D JO41_08325 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D JO41_12735 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D JO41_10675 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_09550 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO41_05415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO41_03370 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO41_12150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO41_11755 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_10515 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_11100 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JO41_08580 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JO41_01240 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JO41_01235 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JO41_07935 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO41_11490 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JO41_09625 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JO41_02280 hypothetical protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:trm03036]
D JO41_02065 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JO41_01395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_00550 integration host factor K05788 ihfB; integration host factor subunit beta
D JO41_04675 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D JO41_12215 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JO41_01115 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A
D JO41_01120 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D JO41_01180 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JO41_02590 hypothetical protein K13052 divIC; cell division protein DivIC
D JO41_07225 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JO41_04525 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JO41_01160 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D JO41_01175 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D JO41_01170 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JO41_01185 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO41_00575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JO41_04780 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D JO41_10700 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO41_10705 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JO41_10710 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JO41_10720 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D JO41_03025 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JO41_02000 hypothetical protein K03496 parA; chromosome partitioning protein
D JO41_03020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JO41_07935 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO41_11490 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JO41_06000 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JO41_12140 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JO41_09620 recombinase XerC K03733 xerC; integrase/recombinase XerC
D JO41_01190 recombinase XerD K04763 xerD; integrase/recombinase XerD
D JO41_04145 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO41_05670 cell division protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JO41_10250 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:trm03400]
D JO41_07985 6-O-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JO41_08025 endonuclease III K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JO41_08060 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JO41_08870 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JO41_07505 CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JO41_09070 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JO41_00355 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JO41_12055 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JO41_06270 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JO41_01750 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JO41_11000 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JO41_11335 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JO41_02895 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JO41_01675 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JO41_09290 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_03720 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JO41_01790 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JO41_01785 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JO41_04355 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JO41_00170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JO41_06545 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JO41_02320 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JO41_06995 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D JO41_06975 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JO41_08700 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JO41_06970 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JO41_09550 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JO41_05415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JO41_03370 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JO41_12150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JO41_11755 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_10515 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08580 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JO41_11540 recombinase RecA K03553 recA; recombination protein RecA
D JO41_11730 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JO41_06010 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JO41_10485 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JO41_00350 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JO41_07555 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JO41_04775 DeoR faimly transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_01985 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_05770 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JO41_10535 recombinase RecR K06187 recR; recombination protein RecR
D JO41_11140 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JO41_06980 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D JO41_01240 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JO41_01235 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JO41_09625 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JO41_00550 integration host factor K05788 ihfB; integration host factor subunit beta
D JO41_09780 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JO41_06125 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JO41_06820 recombination regulator RecX K03565 recX; regulatory protein
D JO41_07655 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JO41_08000 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JO41_00165 response regulator SirA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JO41_04830 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JO41_01865 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:trm03029]
D JO41_09040 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JO41_03865 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JO41_11200 elongation factor Ts K02357 tsf; elongation factor Ts
D JO41_04480 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO41_12490 GTP-binding protein K02355 fusA; elongation factor G
D JO41_02665 fusA; elongation factor G K02355 fusA; elongation factor G
D JO41_06065 fusA; elongation factor G K02355 fusA; elongation factor G
D JO41_06765 GTP-binding protein Era K03595 era; GTPase
D JO41_03590 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JO41_00250 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JO41_02560 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JO41_05065 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JO41_08475 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JO41_00130 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JO41_00125 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO41_04265 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JO41_00135 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JO41_02775 SAM-dependent methlyltransferase K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
D JO41_11785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_06445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_08375 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JO41_02330 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D JO41_07970 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO41_07965 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D JO41_03530 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO41_03680 molecular chaperone GroES K04078 groES; chaperonin GroES
D JO41_07975 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JO41_11820 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JO41_03450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:trm02000]
D JO41_02540 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_04940 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_09330 multidrug ABC transporter permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_10380 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_10775 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_11715 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JO41_02555 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_04945 ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_09335 multidrug ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_10410 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_10765 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_11720 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JO41_04970 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JO41_04840 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO41_04910 ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO41_11625 thiamine ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JO41_11690 hypothetical protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JO41_04680 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO41_07885 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D JO41_04690 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO41_07880 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JO41_04685 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_04695 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_02485 polyamine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_07875 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JO41_00865 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JO41_00860 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D JO41_00850 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D JO41_04180 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JO41_05720 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JO41_05715 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JO41_05710 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JO41_00895 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JO41_00905 hypothetical protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JO41_10975 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO41_09255 ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JO41_09270 ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO41_09275 arabinogalactan ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JO41_00385 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_00440 sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_01505 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JO41_00390 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JO41_01500 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JO41_00395 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JO41_01495 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JO41_00790 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JO41_00795 protein lplB K17319 lplB; putative aldouronate transport system permease protein
D JO41_00800 ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D JO41_09570 sugar-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D JO41_09560 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D JO41_09565 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D JO41_03270 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D JO41_02945 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D JO41_02955 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO41_03260 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JO41_03255 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO41_02960 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JO41_02950 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO41_03265 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JO41_04105 basic membrane protein K23510 rfuA; riboflavin transport system substrate-binding protein
D JO41_04115 branched-chain amino acid ABC transporter permease K23511 rfuC; riboflavin transport system permease protein
D JO41_04120 ABC transporter permease K23512 rfuD; riboflavin transport system permease protein
D JO41_04110 sugar ABC transporter ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein
D JO41_06320 lipoprotein K10555 lsrB; AI-2 transport system substrate-binding protein
D JO41_06330 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein
D JO41_06325 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein
D JO41_06335 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D JO41_06355 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JO41_00300 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JO41_06360 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JO41_06365 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JO41_09135 ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D JO41_09140 ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D JO41_09130 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JO41_09180 phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D JO41_09165 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO41_09170 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D JO41_09175 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D JO41_01595 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JO41_06310 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JO41_11405 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JO41_06305 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JO41_11400 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JO41_01755 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JO41_01760 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JO41_01965 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JO41_01960 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D JO41_01955 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JO41_01945 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JO41_00405 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO41_12595 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JO41_12605 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JO41_12600 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JO41_12615 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JO41_12610 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JO41_08895 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JO41_05760 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JO41_12110 metal ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JO41_08905 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D JO41_05755 HmuU protein K02015 ABC.FEV.P; iron complex transport system permease protein
D JO41_11675 hypothetical protein K02015 ABC.FEV.P; iron complex transport system permease protein
D JO41_05750 hemin ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JO41_08900 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JO41_12115 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JO41_03655 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JO41_06770 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JO41_04065 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JO41_11890 iron-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D JO41_11905 membrane protein K11605 sitC; manganese/iron transport system permease protein
D JO41_11915 membrane protein K11606 sitD; manganese/iron transport system permease protein
D JO41_11895 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein
D JO41_12555 biotin permease K03523 bioY; biotin transport system substrate-specific component
D JO41_12545 hypothetical protein K16783 bioN; biotin transport system permease protein
D JO41_12550 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JO41_04960 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_03320 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_10420 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_01895 integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_11635 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_10350 bacitracin ABC transporter permease K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_10375 membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D JO41_04955 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10425 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10365 membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_01900 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_11640 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10345 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D JO41_10370 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_04950 cobalt ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_01905 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_10340 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_11645 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_10430 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JO41_09075 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D JO41_09080 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D JO41_12070 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JO41_03960 membrane spanning protein K25151 gldF; gliding motility-associated transport system permease protein
D JO41_03955 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D JO41_03965 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D JO41_12505 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D JO41_12515 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JO41_12510 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JO41_10245 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JO41_10740 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO41_11345 3-dehydroquinate dehydratase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JO41_04790 macrolide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_04795 macrolide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_09675 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_09680 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_09695 ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_11460 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JO41_04785 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO41_09685 GTPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO41_11470 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO41_11550 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JO41_08655 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JO41_09520 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO41_11800 multidrug transporter MATE K26937 dinF; MATE family, multidrug efflux pump
D JO41_00435 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO41_02460 multidrug transporter MATE K26937 dinF; MATE family, multidrug efflux pump
D JO41_00965 multidrug transporter K26937 dinF; MATE family, multidrug efflux pump
D JO41_01435 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO41_04835 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D JO41_01765 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D JO41_07050 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JO41_03375 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JO41_05905 PTS sucrose transporter subunit IIABC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JO41_05170 aerotolerance regulator BatA K07114 yfbK; Ca-activated chloride channel homolog
D JO41_05175 BatB protein K07114 yfbK; Ca-activated chloride channel homolog
D JO41_03295 magnesium transporter K06213 mgtE; magnesium transporter
D JO41_09450 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO41_09455 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO41_09090 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO41_04160 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO41_03070 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D JO41_02330 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D JO41_12075 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D JO41_09970 hemolysin K06189 corC; hemolysin (HlyC) family protein
D JO41_04720 MFS transporter K16210 togT; oligogalacturonide transporter
D JO41_04210 membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D JO41_00410 lactate permease K03303 lutP; lactate permease
D JO41_08825 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D JO41_01205 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D JO41_09865 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D JO41_09900 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D JO41_03650 na+/H+ antiporter nhac K03315 nhaC; Na+:H+ antiporter, NhaC family
D JO41_05295 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D JO41_06230 potassium transporter Trk K11105 cvrA; potassium/hydrogen antiporter
D JO41_09645 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D JO41_00910 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D JO41_07950 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D JO41_00885 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D JO41_07955 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D JO41_10235 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D JO41_01195 uracil permease K02824 uraA; uracil permease
D JO41_03310 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JO41_02860 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D JO41_10615 chromate transporter K07240 chrA; chromate transporter
D JO41_10620 chromate transporter K07240 chrA; chromate transporter
D JO41_10015 phosphate:sodium symporter K03324 yjbB; phosphate:Na+ symporter
D JO41_03635 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JO41_11370 malonate transporter K24180 mleP; malate permease and related proteins
D JO41_07020 permease K24180 mleP; malate permease and related proteins
D JO41_05805 transporter K09125 yhhQ; queuosine precursor transporter
D JO41_01170 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JO41_09660 iron transporter K07243 FTR; high-affinity iron transporter
D JO41_09665 membrane protein K07230 p19; periplasmic iron binding protein
D JO41_08780 cell envelope biogenesis protein OmpA K03640 pal; peptidoglycan-associated lipoprotein
D JO41_07175 potassium transporter K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D JO41_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JO41_03910 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JO41_09875 glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JO41_09870 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D JO41_09895 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D JO41_00705 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D JO41_04780 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D JO41_12035 hypothetical protein K04758 feoA; ferrous iron transport protein A
C 02044 Secretion system [BR:trm02044]
D JO41_07255 hypothetical protein K02453 gspD; general secretion pathway protein D
D JO41_00625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D JO41_09605 hypothetical protein K08086 fimV; pilus assembly protein FimV
D JO41_02425 hypothetical protein K02221 yggT; YggT family protein
D JO41_12170 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JO41_10725 hypothetical protein K02241 comFB; competence protein ComFB
D JO41_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO41_09495 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JO41_00225 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D JO41_01345 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO41_01355 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO41_01360 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO41_09470 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO41_09475 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D JO41_09480 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO41_09485 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO41_02250 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D JO41_02235 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D JO41_02225 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D JO41_02210 hypothetical protein K20531 trbF; type IV secretion system protein TrbF
D JO41_02205 hypothetical protein K20532 trbG; type IV secretion system protein TrbG
D JO41_02215 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D JO41_06845 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JO41_03425 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JO41_01820 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JO41_03420 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JO41_02655 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JO41_04375 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JO41_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JO41_12525 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JO41_03430 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JO41_03450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:trm02042]
D JO41_03195 tetanolysin O K11031 slo; thiol-activated cytolysin
D JO41_09090 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO41_04160 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JO41_00520 membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:trm02022]
D JO41_06290 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JO41_06285 response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JO41_00630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO41_00615 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO41_10115 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:trm02035]
D JO41_00630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JO41_11155 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JO41_00620 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JO41_10110 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JO41_10115 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JO41_00615 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JO41_02705 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_02710 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05250 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_05830 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06015 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_08755 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09085 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09105 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_09855 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_00295 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01390 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_03765 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06190 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_06210 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_07675 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11055 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_11365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_12485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JO41_01355 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JO41_01360 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JO41_01365 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JO41_09475 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D JO41_09480 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D JO41_09485 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JO41_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JO41_09495 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JO41_01350 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_11480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JO41_09465 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JO41_09470 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JO41_01345 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JO41_09460 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JO41_01930 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JO41_01340 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JO41_01330 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JO41_01335 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JO41_09435 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JO41_08875 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D JO41_08880 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JO41_08885 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D JO41_09440 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JO41_02735 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JO41_02740 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JO41_07000 flagellin K02406 fliC; flagellin
D JO41_03550 flagellin K02406 fliC; flagellin
D JO41_03555 flagellin K02406 fliC; flagellin
D JO41_03560 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D JO41_09100 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D JO41_07130 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D JO41_09450 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D JO41_09455 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JO41_02745 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D JO41_04035 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JO41_10885 flagellar protein FlbB K02383 flbB; flagellar protein FlbB
D JO41_09445 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D JO41_09505 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D JO41_09510 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D JO41_10860 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D JO41_00625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:trm04812]
D JO41_10700 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO41_01185 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO41_01180 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JO41_03025 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JO41_02000 hypothetical protein K03496 parA; chromosome partitioning protein
D JO41_03020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:trm04147]
D JO41_05035 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D JO41_01620 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D JO41_08960 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JO41_03280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JO41_10075 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JO41_03185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JO41_03435 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JO41_04215 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D JO41_03530 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JO41_07970 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JO41_10255 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JO41_05695 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JO41_04480 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JO41_09805 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JO41_06430 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JO41_09800 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_11060 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_07940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10010 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JO41_10320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JO41_10730 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JO41_08520 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JO41_11660 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JO41_04155 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_00835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JO41_08615 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JO41_08805 electron transfer protein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D JO41_11385 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JO41_11330 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:trm02048]
D JO41_12540 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JO41_06805 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JO41_06175 type I R-M system S protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JO41_06795 type-1 restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JO41_05485 type I restriction-modification protein subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JO41_06185 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JO41_06785 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JO41_08570 restriction endonuclease DpnII K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D JO41_08580 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JO41_10390 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JO41_08565 DNA methylase N-4 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D JO41_05315 modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D JO41_02065 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JO41_06100 mRNA interferase MazF2 K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JO41_02580 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JO41_06865 regulator K19156 prlF; antitoxin PrlF
D JO41_05050 toxin RelE K06218 relE; mRNA interferase RelE/StbE
D JO41_07095 pirin K06218 relE; mRNA interferase RelE/StbE
D JO41_02170 RelE K06218 relE; mRNA interferase RelE/StbE
D JO41_06145 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JO41_04850 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D JO41_05360 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JO41_04845 addiction module protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D JO41_05965 phage-shock protein K03973 pspC; phage shock protein C
D JO41_05100 RelE/StbE family addiction module toxin K19092 parE1_3_4; toxin ParE1/3/4
D JO41_06900 RelE/StbE family addiction module toxin K19092 parE1_3_4; toxin ParE1/3/4
D JO41_07610 death-on-curing protein K07341 doc; death on curing protein
D JO41_01080 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D JO41_04235 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D JO41_04230 DNA-binding protein K21498 higA-1; antitoxin HigA-1
D JO41_01075 pirin K21498 higA-1; antitoxin HigA-1
D JO41_10490 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO41_07805 VapC nucleic acid-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D JO41_01185 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JO41_10700 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JO41_07935 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JO41_11490 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JO41_05060 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JO41_11820 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:trm01504]
D JO41_05295 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D JO41_12570 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JO41_04780 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:trm03100]
D JO41_05910 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_07515 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_05925 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_10090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JO41_00720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06840 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_08045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_08950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06465 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_06470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JO41_07945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JO41_05130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JO41_04195 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JO41_07040 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO41_09820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JO41_07045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO41_05950 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JO41_05430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_08410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_09110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JO41_08945 tRNA-His K14226 tRNA-His; tRNA His
D JO41_01415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_01935 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_04560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_06375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_08405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JO41_08400 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO41_05240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JO41_00180 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_00775 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_03465 tRNA-Met K14230 tRNA-Met; tRNA Met
D JO41_02810 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JO41_11560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_05135 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_00490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JO41_06455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_06460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_06480 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JO41_02820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_01835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_07570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JO41_01825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JO41_02815 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JO41_08660 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_00100 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_06810 tRNA-Val K14237 tRNA-Val; tRNA Val
D JO41_05920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JO41_10095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO41_05930 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JO41_05935 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO41_10100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JO41_12915 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JO41_09860 lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D JO41_10565 iron-sulfur cluster-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D JO41_07790 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JO41_09845 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D JO41_00690 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D JO41_09950 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D JO41_04080 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JO41_00635 glycine/sarcosine/betaine reductase complex protein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO41_00640 glycine/sarcosine/betaine reductase complex component A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO41_06515 beta-aspartyl peptidase K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D JO41_06525 glycine reductase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO41_06520 beta-aspartate methyltransferase K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D JO41_03210 glycine reductase K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO41_03205 glycine reductase K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D JO41_02630 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO41_00185 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO41_00270 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JO41_05120 rRNA (guanine-N2)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JO41_05325 GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D JO41_00545 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JO41_04855 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D JO41_10850 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JO41_01610 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JO41_03300 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D JO41_12660 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JO41_02455 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D JO41_03380 aldolase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D JO41_11935 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D JO41_03825 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D JO41_09365 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D JO41_06005 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D JO41_10645 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D JO41_06530 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JO41_09960 metal-dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D JO41_04555 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO41_01585 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO41_04190 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JO41_08940 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JO41_08965 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D JO41_04615 magnesium chelatase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JO41_11280 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JO41_05110 dehydrogenase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JO41_09910 2-hydroxyglutaryl-CoA dehydratase K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167]
D JO41_09915 2-hydroxyglutaryl-CoA dehydratase K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167]
D JO41_10265 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D JO41_09905 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D JO41_04005 hypothetical protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D JO41_06740 NADH-quinone reductase K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D JO41_06735 NADH-quinone reductase K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D JO41_06760 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D JO41_04995 zinc ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JO41_06745 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D JO41_06750 NADH-quinone reductase K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D JO41_06755 electron transporter RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D JO41_06020 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D JO41_08790 flavodoxin K03839 fldA; flavodoxin I
D JO41_04755 flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JO41_01405 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D JO41_00430 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JO41_05045 Tex-like protein K06959 tex; protein Tex
C 99974 Translation
D JO41_10280 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D JO41_11940 UVR domain protein K19411 mcsA; protein arginine kinase activator
D JO41_08415 trigger factor K03545 tig; trigger factor
D JO41_07645 SsrA-binding protein K03664 smpB; SsrA-binding protein
D JO41_12240 magnesium chelatase K07391 comM; magnesium chelatase family protein
D JO41_04050 molybdenum hydroxylase K07402 xdhC; xanthine dehydrogenase accessory factor
D JO41_09545 XdhC protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D JO41_09980 hypothetical protein K03630 radC; DNA repair protein RadC
D JO41_00235 hypothetical protein K07460 yraN; putative endonuclease
D JO41_09630 DNA-binding protein K04096 smf; DNA processing protein
D JO41_12770 PBSX family phage terminase, large subunit K06909 xtmB; phage terminase large subunit
D JO41_08275 PBSX family phage terminase, large subunit K06909 xtmB; phage terminase large subunit
D JO41_03975 recombinase RarA K07478 ycaJ; putative ATPase
D JO41_02475 transposase K07483 K07483; transposase
D JO41_02470 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JO41_10530 DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JO41_00145 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D JO41_04710 carnitine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JO41_03010 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D JO41_04095 sodium-dependent tryptophan transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JO41_03350 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JO41_12195 sodium-dependent tryptophan transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JO41_03905 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JO41_05825 branched-chain amino acid ABC transporter substrate-binding protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D JO41_09345 aspartate:alanine antiporter K07085 K07085; putative transport protein
C 99978 Cell growth
D JO41_03445 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D JO41_09815 regulatory protein SpoVG K06412 spoVG; stage V sporulation protein G
D JO41_00605 hypothetical protein K06298 gerM; germination protein M
C 99993 Cell motility
C 99995 Signaling proteins
D JO41_09955 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D JO41_00695 peptidase M23 K12943 ygeR; lipoprotein YgeR
C 99994 Others
D JO41_00980 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D JO41_09245 hemerythrin K07216 hr; hemerythrin
D JO41_03585 hemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JO41_11750 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D JO41_10000 methionyl-tRNA synthetase K06878 K06878; tRNA-binding protein
D JO41_11160 patatin family protein K07001 K07001; NTE family protein
D JO41_03790 phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D JO41_05605 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JO41_08650 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JO41_08645 ABC transporter permease K09015 sufD; Fe-S cluster assembly protein SufD
D JO41_11700 LemA family protein K03744 lemA; LemA protein
D JO41_05080 hypothetical protein K03748 sanA; SanA protein
D JO41_05280 integral membrane protein K08974 K08974; putative membrane protein
D JO41_01605 hypothetical protein K08986 ycgQ; putative membrane protein
D JO41_11695 hypothetical protein K08988 K08988; putative membrane protein
C 99997 Function unknown
D JO41_11310 ankryin K06867 K06867; uncharacterized protein
D JO41_06815 methanol dehydrogenase K06872 K06872; uncharacterized protein
D JO41_12135 hypothetical protein K06872 K06872; uncharacterized protein
D JO41_07915 hypothetical protein K06872 K06872; uncharacterized protein
D JO41_06115 hydrolase K06889 K06889; uncharacterized protein
D JO41_09380 hydrolase K06889 K06889; uncharacterized protein
D JO41_01665 peptidase S15 K06889 K06889; uncharacterized protein
D JO41_07195 hypothetical protein K06890 K06890; uncharacterized protein
D JO41_06930 polyketide cyclase K06893 K06893; uncharacterized protein
D JO41_08535 polyketide cyclase K06893 K06893; uncharacterized protein
D JO41_10655 Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D JO41_07680 hypothetical protein K06940 K06940; uncharacterized protein
D JO41_00200 RNA-binding protein K06960 K06960; uncharacterized protein
D JO41_00680 GNAT family acetyltransferase K06975 K06975; uncharacterized protein
D JO41_11245 membrane protein K07003 K07003; uncharacterized protein
D JO41_03670 antibiotic transporter K07003 K07003; uncharacterized protein
D JO41_11110 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D JO41_05740 PTS sugar transporter subunit IID K07035 K07035; uncharacterized protein
D JO41_03940 membrane protein K07035 K07035; uncharacterized protein
D JO41_05365 hypothetical protein K07063 K07063; uncharacterized protein
D JO41_11440 hypothetical protein K07075 K07075; uncharacterized protein
D JO41_00285 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D JO41_05125 permease K07089 K07089; uncharacterized protein
D JO41_01685 membrane protein K07090 K07090; uncharacterized protein
D JO41_05730 phosphodiesterase K07095 K07095; uncharacterized protein
D JO41_11090 phosphoribosyl transferase K07101 K07101; uncharacterized protein
D JO41_05195 membrane protein K07112 K07112; uncharacterized protein
D JO41_04665 ATPase AAA K07133 K07133; uncharacterized protein
D JO41_09315 ATPase K07133 K07133; uncharacterized protein
D JO41_12250 ATPase K07133 K07133; uncharacterized protein
D JO41_03140 ATPase K07133 K07133; uncharacterized protein
D JO41_10685 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein
D JO41_10120 hypothetical protein K09005 K09005; uncharacterized protein
D JO41_09775 diguanylate cyclase K09155 K09155; uncharacterized protein
D JO41_10325 (Fe-S)-binding protein K09706 K09706; uncharacterized protein
D JO41_07135 polymerase K09749 K09749; uncharacterized protein
D JO41_12645 membrane protein K09766 K09766; uncharacterized protein
D JO41_03890 hypothetical protein K09768 K09768; uncharacterized protein
D JO41_04020 phosphatidic acid phosphatase K09775 K09775; uncharacterized protein
D JO41_12065 membrane protein K09790 K09790; uncharacterized protein
D JO41_10895 hypothetical protein K09795 K09795; uncharacterized protein
D JO41_11565 polysaccharide deacetylase K09798 K09798; uncharacterized protein
D JO41_06170 hypothetical protein K09803 K09803; uncharacterized protein
D JO41_08860 hypothetical protein K09803 K09803; uncharacterized protein
D JO41_01145 lipoprotein K09973 K09973; uncharacterized protein
D JO41_08990 hypothetical protein K07584 ysxB; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024