+D GENES KO
#
KEGG Orthology (KO) - Thermotoga sp. RQ2
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:trq00010]
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D TRQ2_1444 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0648 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TRQ2_0675 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TRQ2_0239 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TRQ2_0241 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TRQ2_0240 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TRQ2_1050 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TRQ2_0740 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TRQ2_0676 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_1651 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0049 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_1066 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0529 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1650 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1065 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_0952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D TRQ2_0655 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TRQ2_1538 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:trq00020]
D TRQ2_0647 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D TRQ2_1668 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_1651 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0049 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_1066 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0529 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1650 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1065 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_0528 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D TRQ2_1064 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D TRQ2_1067 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D TRQ2_0048 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D TRQ2_0397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TRQ2_0396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:trq00030]
D TRQ2_1444 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TRQ2_1661 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TRQ2_1662 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D TRQ2_0497 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TRQ2_1116 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TRQ2_1062 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TRQ2_0636 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D TRQ2_1737 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TRQ2_1222 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D TRQ2_0781 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D TRQ2_1292 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TRQ2_0881 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D TRQ2_0492 carbohydrate kinase FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D TRQ2_0880 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D TRQ2_1248 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D TRQ2_0675 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0648 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:trq00040]
D TRQ2_0501 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D TRQ2_0511 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D TRQ2_0883 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D TRQ2_0878 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D TRQ2_0879 Mannitol dehydrogenase domain K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D TRQ2_0495 conserved hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D TRQ2_0654 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D TRQ2_1116 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TRQ2_0672 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D TRQ2_0653 carbohydrate kinase FGGY K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D TRQ2_0831 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D TRQ2_1162 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D TRQ2_1744 carbohydrate kinase FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TRQ2_1745 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D TRQ2_0624 L-fucose isomerase 1 domain protein K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:trq00051]
D TRQ2_1591 Carbohydrate binding module 27 K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D TRQ2_0635 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TRQ2_0191 mannose-6-phosphate isomerase type I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TRQ2_0157 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TRQ2_1775 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TRQ2_0624 L-fucose isomerase 1 domain protein K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D TRQ2_1744 carbohydrate kinase FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TRQ2_1745 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0648 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TRQ2_0099 PfkB domain protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D TRQ2_0641 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D TRQ2_1162 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D TRQ2_0675 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TRQ2_0239 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TRQ2_1737 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TRQ2_0639 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:trq00052]
D TRQ2_0655 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TRQ2_1628 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TRQ2_1627 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TRQ2_0031 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TRQ2_0428 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D TRQ2_1625 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TRQ2_1623 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D TRQ2_0621 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D TRQ2_1626 alpha-galactosidase-like protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0648 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TRQ2_1307 Beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
D TRQ2_0654 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:trq00500]
D TRQ2_1307 Beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D TRQ2_0920 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0502 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0969 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TRQ2_1760 peptidase M42 family protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1074 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1073 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1187 glycoside hydrolase family 12 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_0968 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D TRQ2_1538 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D TRQ2_0708 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TRQ2_0709 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TRQ2_0032 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D TRQ2_1330 glycoside hydrolase family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TRQ2_1647 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TRQ2_0978 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D TRQ2_0983 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D TRQ2_0987 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D TRQ2_1179 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D TRQ2_0568 alpha amylase catalytic region K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D TRQ2_0542 glycosyl transferase group 1 K13057 treT; trehalose synthase [EC:2.4.1.245]
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D TRQ2_1444 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TRQ2_0635 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:trq00520]
D TRQ2_0117 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TRQ2_0112 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D TRQ2_0635 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TRQ2_0800 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_0113 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_0764 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D TRQ2_1293 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TRQ2_0839 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TRQ2_1120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TRQ2_1774 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TRQ2_0353 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D TRQ2_0351 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D TRQ2_0326 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D TRQ2_0656 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D TRQ2_0658 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D TRQ2_1628 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TRQ2_1627 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TRQ2_0031 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TRQ2_0428 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TRQ2_1444 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TRQ2_0191 mannose-6-phosphate isomerase type I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TRQ2_0157 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TRQ2_1775 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TRQ2_0364 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D TRQ2_0708 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TRQ2_0709 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:trq00620]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_1651 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0049 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_1066 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0529 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1650 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1065 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D TRQ2_0674 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TRQ2_1681 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TRQ2_0556 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D TRQ2_0740 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TRQ2_1227 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TRQ2_0952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TRQ2_1524 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TRQ2_0813 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TRQ2_0395 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TRQ2_0819 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D TRQ2_0047 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D TRQ2_0397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TRQ2_0396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TRQ2_0676 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TRQ2_0384 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TRQ2_0385 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:trq00630]
D TRQ2_0647 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D TRQ2_1428 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_0207 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TRQ2_0735 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TRQ2_0734 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TRQ2_0737 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0736 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TRQ2_1248 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D TRQ2_0881 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:trq00640]
D TRQ2_0674 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TRQ2_1681 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TRQ2_0556 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_0952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TRQ2_1634 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D TRQ2_0522 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:trq00650]
D TRQ2_1069 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D TRQ2_1071 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D TRQ2_1070 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D TRQ2_0047 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D TRQ2_0210 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D TRQ2_0211 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_1651 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0049 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_1066 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0529 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1650 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1065 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_0389 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TRQ2_0388 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:trq00660]
D TRQ2_0389 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TRQ2_0388 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TRQ2_0383 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0646 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0382 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0645 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0381 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:trq00562]
D TRQ2_1308 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TRQ2_1313 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D TRQ2_1312 nucleotidyl transferase K07281 ipct; 1L-myo-inositol 1-phosphate cytidylyltransferase [EC:2.7.7.74]
D TRQ2_1311 CDP-alcohol phosphatidyltransferase K07291 dipps; CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.8.34]
D TRQ2_0239 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:trq00190]
D TRQ2_1604 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TRQ2_1603 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TRQ2_1602 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TRQ2_0933 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TRQ2_0721 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TRQ2_0935 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TRQ2_0720 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TRQ2_1605 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TRQ2_1275 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TRQ2_1273 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TRQ2_1274 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TRQ2_1276 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TRQ2_1272 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TRQ2_1279 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TRQ2_1277 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TRQ2_1278 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TRQ2_1102 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D TRQ2_1101 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D TRQ2_1107 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D TRQ2_1100 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D TRQ2_1103 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D TRQ2_1104 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D TRQ2_1106 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D TRQ2_1105 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D TRQ2_0349 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:trq00710]
D TRQ2_0240 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TRQ2_0241 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TRQ2_0675 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TRQ2_1062 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TRQ2_1737 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TRQ2_0239 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TRQ2_1116 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TRQ2_0636 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D TRQ2_0676 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:trq00720]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_0676 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TRQ2_0397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TRQ2_0396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TRQ2_1651 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0049 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_1066 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D TRQ2_0529 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1650 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_1065 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D TRQ2_0528 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D TRQ2_1064 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D TRQ2_1067 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D TRQ2_0048 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D TRQ2_1668 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TRQ2_1058 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D TRQ2_1057 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TRQ2_0538 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D TRQ2_1681 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TRQ2_0556 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D TRQ2_0674 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:trq00680]
D TRQ2_0538 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D TRQ2_0207 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TRQ2_1248 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TRQ2_0675 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0648 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TRQ2_0674 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TRQ2_1681 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D TRQ2_1050 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TRQ2_0606 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TRQ2_1455 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D TRQ2_0129 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:trq00910]
D TRQ2_1643 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D TRQ2_1790 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_1304 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TRQ2_1601 4Fe-4S ferredoxin iron-sulfur binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:trq00920]
D TRQ2_1258 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D TRQ2_0263 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TRQ2_0264 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TRQ2_0046 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:trq00061]
D TRQ2_0773 phosphopantetheine-binding K02078 acpP; acyl carrier protein
D TRQ2_0267 acyl carrier protein K02078 acpP; acyl carrier protein
D TRQ2_0128 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TRQ2_0124 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TRQ2_1646 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_1110 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_0125 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TRQ2_0126 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:trq00071]
D TRQ2_0173 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00530 nroR; rubredoxin---NAD(P)+ reductase [EC:1.18.1.4]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:trq00561]
D TRQ2_1248 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D TRQ2_0522 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D TRQ2_1322 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TRQ2_0799 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TRQ2_1339 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1536 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TRQ2_1131 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D TRQ2_1626 alpha-galactosidase-like protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:trq00564]
D TRQ2_0543 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TRQ2_1324 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TRQ2_1339 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1536 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TRQ2_0301 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D TRQ2_1285 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TRQ2_1432 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TRQ2_0958 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TRQ2_0652 Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:trq00600]
D TRQ2_1625 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TRQ2_1626 alpha-galactosidase-like protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:trq00230]
D TRQ2_1638 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TRQ2_0781 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D TRQ2_1292 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TRQ2_1573 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TRQ2_1570 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TRQ2_1572 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TRQ2_1574 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D TRQ2_1576 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D TRQ2_1575 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TRQ2_1569 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TRQ2_0488 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TRQ2_0489 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TRQ2_1577 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TRQ2_1721 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TRQ2_1571 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TRQ2_1445 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TRQ2_0941 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D TRQ2_1167 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TRQ2_1259 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TRQ2_1088 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TRQ2_0742 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TRQ2_1482 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TRQ2_0789 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TRQ2_1001 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TRQ2_1145 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TRQ2_0829 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TRQ2_0550 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TRQ2_0198 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TRQ2_0753 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TRQ2_1720 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TRQ2_1373 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TRQ2_0909 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D TRQ2_0014 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:trq00240]
D TRQ2_0380 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TRQ2_0379 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TRQ2_1306 aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D TRQ2_0598 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TRQ2_0600 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D TRQ2_0599 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase-like protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D TRQ2_0602 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TRQ2_0601 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TRQ2_1267 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TRQ2_0014 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TRQ2_1219 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TRQ2_0123 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TRQ2_1335 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TRQ2_0176 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D TRQ2_0941 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D TRQ2_1167 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TRQ2_0206 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D TRQ2_1357 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D TRQ2_1176 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D TRQ2_0081 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D TRQ2_0550 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TRQ2_0829 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TRQ2_0530 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TRQ2_1717 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TRQ2_0533 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D TRQ2_0486 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:trq00250]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_0311 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TRQ2_0491 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D TRQ2_1045 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TRQ2_1044 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TRQ2_1720 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TRQ2_1721 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TRQ2_1306 aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D TRQ2_1304 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TRQ2_1601 4Fe-4S ferredoxin iron-sulfur binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TRQ2_1790 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_0380 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TRQ2_0379 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TRQ2_1575 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TRQ2_0800 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_0113 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_1573 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:trq00260]
D TRQ2_1412 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TRQ2_0390 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D TRQ2_1417 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TRQ2_0392 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D TRQ2_0391 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TRQ2_1081 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D TRQ2_0207 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TRQ2_1428 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D TRQ2_1248 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D TRQ2_1050 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TRQ2_0606 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TRQ2_1455 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D TRQ2_1429 aminotransferase class V K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51]
D TRQ2_0735 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TRQ2_0734 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TRQ2_0737 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0736 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TRQ2_0579 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TRQ2_0811 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TRQ2_0810 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TRQ2_0398 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:trq00270]
D TRQ2_0263 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TRQ2_0264 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TRQ2_0680 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TRQ2_1533 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TRQ2_1171 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TRQ2_0274 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TRQ2_0275 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TRQ2_1682 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D TRQ2_1844 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D TRQ2_0016 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TRQ2_0418 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D TRQ2_0776 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TRQ2_1412 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TRQ2_0390 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D TRQ2_1417 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TRQ2_0046 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TRQ2_0045 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D TRQ2_0096 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_0952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TRQ2_0723 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D TRQ2_0606 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:trq00280]
D TRQ2_0096 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:trq00290]
D TRQ2_0579 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TRQ2_0383 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0646 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0382 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0645 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TRQ2_0381 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D TRQ2_0389 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TRQ2_0388 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TRQ2_0387 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TRQ2_0386 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TRQ2_0096 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TRQ2_0384 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TRQ2_0385 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:trq00300]
D TRQ2_1412 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TRQ2_0390 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D TRQ2_1417 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TRQ2_1415 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TRQ2_1414 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TRQ2_1040 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TRQ2_1163 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D TRQ2_1416 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TRQ2_1411 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TRQ2_1413 Tetrahydrodipicolinate succinyltransferase domain protein K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D TRQ2_1410 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D TRQ2_1680 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D TRQ2_0711 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TRQ2_0712 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:trq00220]
D TRQ2_1719 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TRQ2_1045 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TRQ2_1044 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TRQ2_1575 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_0380 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TRQ2_0379 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TRQ2_1790 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1042 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D TRQ2_1041 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TRQ2_1043 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TRQ2_1040 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:trq00330]
D TRQ2_0946 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D TRQ2_0275 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TRQ2_0274 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TRQ2_0828 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TRQ2_0358 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D TRQ2_0643 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TRQ2_0644 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:trq00340]
D TRQ2_1766 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TRQ2_1773 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D TRQ2_1771 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TRQ2_1770 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TRQ2_1772 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TRQ2_1769 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TRQ2_0122 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D TRQ2_1767 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TRQ2_0084 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:trq00350]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:trq00360]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TRQ2_0828 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:trq00380]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0828 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:trq00400]
D TRQ2_0592 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TRQ2_0587 Shikimate kinase., 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D TRQ2_0586 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D TRQ2_0590 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TRQ2_0588 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TRQ2_0806 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TRQ2_0807 anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D TRQ2_0809 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TRQ2_0808 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TRQ2_0811 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TRQ2_0810 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TRQ2_0398 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TRQ2_0794 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D TRQ2_0591 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:trq00410]
D TRQ2_1841 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TRQ2_1740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:trq00430]
D TRQ2_1681 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TRQ2_0556 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D TRQ2_0674 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:trq00450]
D TRQ2_0680 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TRQ2_1533 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TRQ2_1458 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D TRQ2_0058 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TRQ2_0814 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TRQ2_1732 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:trq00460]
D TRQ2_0920 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0502 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0969 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0207 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:trq00470]
D TRQ2_0689 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TRQ2_1575 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TRQ2_0714 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TRQ2_0939 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D TRQ2_0723 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D TRQ2_1416 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TRQ2_1411 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TRQ2_1260 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:trq00480]
D TRQ2_1668 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TRQ2_0497 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TRQ2_1661 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TRQ2_0946 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D TRQ2_0275 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:trq00511]
D TRQ2_1625 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TRQ2_0965 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D TRQ2_1587 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D TRQ2_1288 glycoside hydrolase family 2 sugar binding K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D TRQ2_0625 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:trq00542]
D TRQ2_1212 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:trq00541]
D TRQ2_0428 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TRQ2_0303 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0065 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0305 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TRQ2_0304 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TRQ2_0306 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D TRQ2_0191 mannose-6-phosphate isomerase type I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TRQ2_0157 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TRQ2_1775 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TRQ2_0364 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D TRQ2_1293 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TRQ2_1774 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TRQ2_0353 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D TRQ2_0351 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D TRQ2_0326 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:trq00550]
D TRQ2_0839 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TRQ2_1120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TRQ2_0717 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TRQ2_0714 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TRQ2_0711 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TRQ2_0689 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TRQ2_0712 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TRQ2_1431 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TRQ2_0034 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TRQ2_0713 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TRQ2_0716 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TRQ2_0041 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TRQ2_0345 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TRQ2_0057 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:trq00552]
D TRQ2_0034 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TRQ2_1212 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TRQ2_0108 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TRQ2_0300 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D TRQ2_1131 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:trq00543]
D TRQ2_1212 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TRQ2_0263 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:trq00730]
D TRQ2_0139 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D TRQ2_0137 Phosphomethylpyrimidine kinase type-1 K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D TRQ2_1142 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TRQ2_1140 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TRQ2_1553 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D TRQ2_1054 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TRQ2_0140 thiazole biosynthesis enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D TRQ2_0909 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D TRQ2_1117 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TRQ2_0793 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D TRQ2_0039 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D TRQ2_1373 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:trq00740]
D TRQ2_0995 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TRQ2_0993 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TRQ2_0996 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TRQ2_0994 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TRQ2_0070 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TRQ2_1638 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:trq00750]
D TRQ2_0391 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TRQ2_0462 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D TRQ2_0463 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:trq00760]
D TRQ2_1186 Aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D TRQ2_1185 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D TRQ2_1184 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TRQ2_0461 conserved hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D TRQ2_1259 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TRQ2_1088 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TRQ2_0941 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D TRQ2_1167 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TRQ2_0850 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TRQ2_0014 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TRQ2_0283 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D TRQ2_1567 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TRQ2_0460 isochorismatase hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D TRQ2_0445 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D TRQ2_1092 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:trq00770]
D TRQ2_0389 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TRQ2_0388 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TRQ2_0387 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TRQ2_0386 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TRQ2_1097 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TRQ2_1740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TRQ2_0044 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D TRQ2_1147 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D TRQ2_0014 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TRQ2_0186 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TRQ2_1442 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TRQ2_0236 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TRQ2_0096 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TRQ2_1841 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:trq00780]
D TRQ2_0124 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TRQ2_1646 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_1110 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_0125 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TRQ2_1551 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D TRQ2_0724 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:trq00785]
D TRQ2_0220 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TRQ2_0942 Radical SAM domain protein K09711 lipS1; lipoyl synthase
D TRQ2_0705 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_0735 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TRQ2_0734 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TRQ2_0737 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TRQ2_0736 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:trq00790]
D TRQ2_0906 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D TRQ2_0793 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D TRQ2_0904 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D TRQ2_0905 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TRQ2_1305 dihydrofolate reductase-like protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TRQ2_0782 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TRQ2_0995 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TRQ2_0907 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TRQ2_0136 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TRQ2_1154 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:trq00670]
D TRQ2_1305 dihydrofolate reductase-like protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TRQ2_1058 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D TRQ2_1057 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TRQ2_0207 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TRQ2_1572 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TRQ2_1571 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TRQ2_0084 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D TRQ2_0409 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TRQ2_0737 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TRQ2_0680 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TRQ2_0486 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D TRQ2_1223 Formiminotransferase-cyclodeaminase K01746 E4.3.1.4; formiminotetrahydrofolate cyclodeaminase [EC:4.3.1.4]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:trq00860]
D TRQ2_0944 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TRQ2_1358 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:trq00130]
D TRQ2_0174 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TRQ2_1191 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:trq00900]
D TRQ2_1054 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TRQ2_0038 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TRQ2_1436 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TRQ2_1446 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TRQ2_0281 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TRQ2_0036 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TRQ2_1336 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TRQ2_0787 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TRQ2_1198 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TRQ2_1431 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TRQ2_1062 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:trq00523]
D TRQ2_0303 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0065 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0305 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TRQ2_0304 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TRQ2_0306 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D TRQ2_0305 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:trq00946]
D TRQ2_0920 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0502 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0969 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D TRQ2_0870 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D TRQ2_0504 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:trq00332]
D TRQ2_0643 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TRQ2_0644 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:trq00261]
D TRQ2_1412 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TRQ2_0390 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D TRQ2_1417 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TRQ2_1415 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TRQ2_1414 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:trq00521]
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D TRQ2_1313 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D TRQ2_1308 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TRQ2_0303 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0065 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0305 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TRQ2_0304 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TRQ2_0306 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TRQ2_1363 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:trq00525]
D TRQ2_0303 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0065 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TRQ2_0305 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:trq00401]
D TRQ2_0591 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D TRQ2_0806 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TRQ2_0128 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TRQ2_1646 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_1110 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TRQ2_0773 phosphopantetheine-binding K02078 acpP; acyl carrier protein
D TRQ2_0267 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:trq00999]
D TRQ2_1171 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TRQ2_0920 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0502 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TRQ2_0969 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D TRQ2_1260 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D TRQ2_0047 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D TRQ2_0210 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D TRQ2_0211 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation [PATH:trq00627]
D TRQ2_0828 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TRQ2_1227 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:trq00625]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D TRQ2_1642 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D TRQ2_1642 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:trq00633]
D TRQ2_0538 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D TRQ2_0928 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D TRQ2_0927 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D TRQ2_0930 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D TRQ2_0929 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:trq00643]
D TRQ2_0828 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:trq00626]
D TRQ2_0836 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:trq03020]
D TRQ2_0477 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TRQ2_0476 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TRQ2_1366 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TRQ2_1146 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:trq03010]
D TRQ2_1337 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D TRQ2_0164 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TRQ2_1388 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TRQ2_1367 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D TRQ2_1377 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TRQ2_0333 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TRQ2_1398 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TRQ2_1380 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TRQ2_1345 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TRQ2_1395 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TRQ2_1368 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TRQ2_1399 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TRQ2_1369 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TRQ2_1381 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TRQ2_1485 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TRQ2_1229 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TRQ2_1385 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TRQ2_0331 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TRQ2_1390 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TRQ2_1172 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TRQ2_0480 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TRQ2_1391 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TRQ2_1394 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TRQ2_1393 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TRQ2_1382 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TRQ2_1379 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TRQ2_0478 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TRQ2_0064 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TRQ2_0479 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TRQ2_0481 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TRQ2_1346 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TRQ2_1384 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TRQ2_1375 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TRQ2_1387 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TRQ2_1365 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TRQ2_1378 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TRQ2_1234 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TRQ2_1255 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TRQ2_1350 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TRQ2_1389 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TRQ2_1392 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TRQ2_1383 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TRQ2_1291 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TRQ2_1348 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TRQ2_0693 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TRQ2_1386 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TRQ2_1376 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TRQ2_1150 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TRQ2_0798 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TRQ2_0484 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TRQ2_1356 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TRQ2_1254 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TRQ2_1370 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TRQ2_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TRQ2_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TRQ2_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:trq00970]
D TRQ2_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0051 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TRQ2_R0034 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TRQ2_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TRQ2_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TRQ2_R0017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TRQ2_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TRQ2_R0032 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TRQ2_R0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0023 tRNA-His K14226 tRNA-His; tRNA His
D TRQ2_R0029 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TRQ2_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TRQ2_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TRQ2_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0039 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TRQ2_R0031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0012 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TRQ2_R0013 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TRQ2_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_0944 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TRQ2_1478 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TRQ2_1547 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TRQ2_1546 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TRQ2_0696 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TRQ2_1433 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_1099 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_1333 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TRQ2_0732 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TRQ2_0731 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TRQ2_0187 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TRQ2_1450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TRQ2_0208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TRQ2_1420 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D TRQ2_1732 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TRQ2_0409 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TRQ2_1004 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TRQ2_0780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TRQ2_1468 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TRQ2_1129 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TRQ2_1723 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TRQ2_0423 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TRQ2_1726 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_1765 histidyl-tRNA synthetase-related protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_0105 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TRQ2_0104 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TRQ2_0457 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TRQ2_0443 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:trq03060]
D TRQ2_1374 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TRQ2_0483 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TRQ2_0456 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TRQ2_0067 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TRQ2_0066 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TRQ2_0068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TRQ2_1353 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TRQ2_1241 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TRQ2_1228 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TRQ2_R0052 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D TRQ2_0366 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TRQ2_1235 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TRQ2_0472 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:trq04122]
D TRQ2_1142 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TRQ2_0417 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TRQ2_1140 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:trq03018]
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TRQ2_1484 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TRQ2_0205 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TRQ2_1364 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TRQ2_0962 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TRQ2_0266 hydrolase of the metallo-beta-lactamase superfamily-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0558 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TRQ2_0430 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TRQ2_0411 RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:trq03030]
D TRQ2_0439 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TRQ2_0474 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TRQ2_0360 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TRQ2_0243 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0155 DNA polymerase III gamma/tau subunits-like protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0767 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TRQ2_0686 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TRQ2_1089 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TRQ2_1344 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0012 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:trq03410]
D TRQ2_0566 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TRQ2_0426 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TRQ2_0570 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_1209 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:trq03420]
D TRQ2_1342 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TRQ2_0455 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TRQ2_1063 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TRQ2_0683 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TRQ2_1581 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:trq03430]
D TRQ2_1115 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1828 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1829 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1541 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TRQ2_0923 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TRQ2_1581 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TRQ2_1056 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TRQ2_1055 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TRQ2_1209 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0474 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TRQ2_0360 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TRQ2_0686 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TRQ2_0243 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0155 DNA polymerase III gamma/tau subunits-like protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0767 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TRQ2_0439 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:trq03440]
D TRQ2_1209 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0960 recA protein K03553 recA; recombination protein RecA
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_0783 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TRQ2_1095 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TRQ2_0361 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TRQ2_0743 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TRQ2_0474 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TRQ2_0360 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TRQ2_0686 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TRQ2_0243 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0155 DNA polymerase III gamma/tau subunits-like protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0767 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TRQ2_0439 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TRQ2_0770 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:trq02010]
D TRQ2_1454 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D TRQ2_1451 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein
D TRQ2_1452 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D TRQ2_1453 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D TRQ2_0984 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_1614 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_0985 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein
D TRQ2_1615 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein
D TRQ2_0986 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein
D TRQ2_1616 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein
D TRQ2_1543 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TRQ2_1586 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TRQ2_0512 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D TRQ2_0513 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D TRQ2_0514 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D TRQ2_0970 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D TRQ2_0971 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D TRQ2_0972 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D TRQ2_0116 extracellular solute-binding protein family 1 K17244 chiE; putative chitobiose transport system substrate-binding protein
D TRQ2_0115 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein
D TRQ2_0114 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein
D TRQ2_0845 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D TRQ2_0843 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D TRQ2_0842 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D TRQ2_0844 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D TRQ2_0833 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0973 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0974 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TRQ2_0835 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TRQ2_0832 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TRQ2_0975 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TRQ2_1696 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D TRQ2_1695 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D TRQ2_1694 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D TRQ2_1556 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TRQ2_1557 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D TRQ2_1558 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TRQ2_1559 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TRQ2_0342 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D TRQ2_0343 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D TRQ2_0344 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D TRQ2_1676 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TRQ2_1675 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D TRQ2_1674 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D TRQ2_1673 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TRQ2_1672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TRQ2_1079 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TRQ2_1078 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TRQ2_1077 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TRQ2_1076 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TRQ2_1075 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TRQ2_0824 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D TRQ2_0822 ABC-3 protein K09816 znuB; zinc transport system permease protein
D TRQ2_0823 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TRQ2_0127 BioY protein K03523 bioY; biotin transport system substrate-specific component
D TRQ2_0951 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D TRQ2_1166 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TRQ2_0726 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TRQ2_1754 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TRQ2_1564 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0902 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0650 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0649 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:trq02060]
D TRQ2_0637 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TRQ2_0638 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TRQ2_0639 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D TRQ2_0099 PfkB domain protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D TRQ2_0641 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D TRQ2_0640 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:trq03070]
D TRQ2_0067 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TRQ2_0066 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TRQ2_0483 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TRQ2_0456 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TRQ2_1374 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TRQ2_0068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TRQ2_1353 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TRQ2_1241 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TRQ2_0366 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TRQ2_1228 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:trq02020]
D TRQ2_1175 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TRQ2_0793 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D TRQ2_1556 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TRQ2_0365 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TRQ2_0816 flagellin domain protein K02406 fliC; flagellin
D TRQ2_0168 flagellin domain protein K02406 fliC; flagellin
D TRQ2_0025 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D TRQ2_0253 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TRQ2_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TRQ2_0395 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TRQ2_0697 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_1548 type IV pilin-related protein K02650 pilA; type IV pilus assembly protein PilA
D TRQ2_0471 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TRQ2_1321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0564 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0009 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0515 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0922 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0209 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_0227 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_0226 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TRQ2_0228 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TRQ2_0526 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TRQ2_0611 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D TRQ2_0289 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TRQ2_1774 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TRQ2_0501 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D TRQ2_1760 peptidase M42 family protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1074 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1073 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_1187 glycoside hydrolase family 12 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TRQ2_0862 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TRQ2_0946 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:trq02024]
D TRQ2_0411 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TRQ2_0806 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TRQ2_1676 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TRQ2_1675 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D TRQ2_1674 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D TRQ2_1673 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TRQ2_1672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TRQ2_0511 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D TRQ2_0993 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TRQ2_1079 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TRQ2_1078 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TRQ2_1077 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TRQ2_1076 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TRQ2_1075 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TRQ2_0510 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0876 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0406 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0890 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1666 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1619 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0914 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0622 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0631 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1592 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1595 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0475 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0500 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0509 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0875 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0405 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0886 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1667 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1620 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0915 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0630 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1596 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0432 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0508 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0874 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0404 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0887 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1621 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1663 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0916 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0629 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1597 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0433 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0507 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0873 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0888 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1624 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1664 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0917 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0628 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1598 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0437 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0434 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0889 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0506 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0407 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0435 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0627 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0872 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0918 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1599 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1622 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1665 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1353 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TRQ2_0483 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TRQ2_0456 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TRQ2_1374 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TRQ2_0068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TRQ2_1241 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TRQ2_0366 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TRQ2_1228 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:trq02030]
D TRQ2_1321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0564 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0009 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0515 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0922 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0984 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_1614 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_0833 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0973 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0226 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TRQ2_0209 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_0227 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_0228 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TRQ2_0023 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D TRQ2_1282 CheC domain protein K03409 cheX; chemotaxis protein CheX
D TRQ2_0526 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TRQ2_0024 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TRQ2_0471 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TRQ2_0728 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TRQ2_0250 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TRQ2_0249 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TRQ2_0253 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TRQ2_0252 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:trq02040]
D TRQ2_1463 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TRQ2_0727 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TRQ2_0728 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TRQ2_0730 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TRQ2_0425 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TRQ2_0251 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TRQ2_0250 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TRQ2_0249 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TRQ2_0229 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TRQ2_0230 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TRQ2_0231 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TRQ2_0017 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TRQ2_0019 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TRQ2_0018 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TRQ2_1204 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TRQ2_1465 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TRQ2_1464 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TRQ2_0256 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TRQ2_0255 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D TRQ2_1206 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF
D TRQ2_1205 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TRQ2_1203 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TRQ2_1202 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D TRQ2_0294 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D TRQ2_0864 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TRQ2_0865 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TRQ2_0816 flagellin domain protein K02406 fliC; flagellin
D TRQ2_0168 flagellin domain protein K02406 fliC; flagellin
D TRQ2_1693 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TRQ2_1640 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TRQ2_0253 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TRQ2_0252 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TRQ2_0862 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TRQ2_1343 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D TRQ2_0025 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D TRQ2_0680 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:trq01501]
D TRQ2_0117 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TRQ2_1079 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TRQ2_1078 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TRQ2_1077 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TRQ2_1076 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TRQ2_1075 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TRQ2_0041 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TRQ2_0345 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TRQ2_0057 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:trq01502]
D TRQ2_0689 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TRQ2_0712 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TRQ2_0713 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TRQ2_0716 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D TRQ2_0365 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:trq01000]
C 01001 Protein kinases [BR:trq01001]
D TRQ2_0194 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TRQ2_0284 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D TRQ2_1175 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TRQ2_0074 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_0820 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_1562 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_0226 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:trq01009]
D TRQ2_0776 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:trq01002]
D TRQ2_0472 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TRQ2_1138 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TRQ2_1001 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TRQ2_1573 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TRQ2_0800 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_0113 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TRQ2_0311 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TRQ2_1192 Abortive infection protein K07052 K07052; CAAX protease family protein
D TRQ2_1827 oligoendopeptidase, M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D TRQ2_0818 peptidase dimerisation domain protein K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D TRQ2_1163 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D TRQ2_1410 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D TRQ2_1372 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TRQ2_0903 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TRQ2_0356 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TRQ2_0037 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TRQ2_0365 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TRQ2_0233 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TRQ2_1297 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TRQ2_1735 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TRQ2_1235 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TRQ2_0180 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TRQ2_1730 Rhomboid family protein K07059 K07059; rhomboid family protein
D TRQ2_0416 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TRQ2_0200 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D TRQ2_0201 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D TRQ2_1811 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D TRQ2_0998 HflC protein K04087 hflC; modulator of FtsH protease HflC
D TRQ2_0999 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:trq01003]
D TRQ2_0032 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D TRQ2_0041 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TRQ2_1425 glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D TRQ2_1419 glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D TRQ2_0108 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TRQ2_1212 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TRQ2_1588 glycosyl transferase group 1 K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:trq01005]
D TRQ2_1212 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:trq01011]
D TRQ2_0839 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TRQ2_1120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TRQ2_0717 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TRQ2_0714 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TRQ2_0711 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TRQ2_0689 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TRQ2_0713 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TRQ2_0716 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TRQ2_0034 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TRQ2_0861 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TRQ2_0041 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TRQ2_0345 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TRQ2_0057 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TRQ2_0006 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:trq01004]
D TRQ2_0128 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TRQ2_0124 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TRQ2_1646 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_1110 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TRQ2_0125 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TRQ2_0126 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D TRQ2_0799 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TRQ2_1339 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1536 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TRQ2_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:trq01008]
C 01006 Prenyltransferases [BR:trq01006]
D TRQ2_0787 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TRQ2_1198 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TRQ2_1431 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TRQ2_0412 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TRQ2_1191 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:trq01007]
D TRQ2_0944 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TRQ2_1478 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TRQ2_0457 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TRQ2_0443 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TRQ2_0208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TRQ2_1723 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TRQ2_1732 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TRQ2_1468 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TRQ2_1004 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TRQ2_0780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TRQ2_1129 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TRQ2_1333 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TRQ2_1726 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_1765 histidyl-tRNA synthetase-related protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_0732 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TRQ2_0731 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TRQ2_1450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TRQ2_0423 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TRQ2_0187 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TRQ2_1433 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_1099 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_0105 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TRQ2_0104 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TRQ2_1420 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D TRQ2_1565 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1136 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TRQ2_1768 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TRQ2_1040 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TRQ2_0096 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TRQ2_0364 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:trq00194]
D TRQ2_1272 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TRQ2_1273 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TRQ2_1274 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TRQ2_1275 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TRQ2_1276 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TRQ2_1277 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TRQ2_1278 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TRQ2_1279 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TRQ2_1281 conserved hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:trq03000]
D TRQ2_0642 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D TRQ2_1618 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TRQ2_1600 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TRQ2_0673 regulatory protein GntR HTH K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D TRQ2_1778 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D TRQ2_0825 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TRQ2_1048 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TRQ2_1409 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D TRQ2_1843 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D TRQ2_0334 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D TRQ2_1590 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D TRQ2_0724 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TRQ2_0779 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D TRQ2_1320 Rex DNA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D TRQ2_1328 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator
D TRQ2_1323 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator
D TRQ2_0560 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D TRQ2_0076 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D TRQ2_1660 phage shock protein C, PspC K03973 pspC; phage shock protein C
C 03021 Transcription machinery [BR:trq03021]
D TRQ2_1366 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TRQ2_0477 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TRQ2_0476 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TRQ2_1146 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TRQ2_1343 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D TRQ2_1261 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TRQ2_0403 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D TRQ2_0025 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D TRQ2_1047 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TRQ2_1059 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TRQ2_0482 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TRQ2_0468 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D TRQ2_1334 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D TRQ2_0194 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TRQ2_1473 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D TRQ2_1128 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TRQ2_1364 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:trq03019]
D TRQ2_1269 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D TRQ2_1714 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TRQ2_0266 hydrolase of the metallo-beta-lactamase superfamily-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TRQ2_0962 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TRQ2_0205 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TRQ2_0691 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TRQ2_1484 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TRQ2_1364 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TRQ2_0739 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TRQ2_0558 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TRQ2_0430 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TRQ2_0411 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TRQ2_0697 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TRQ2_1124 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:trq03011]
D TRQ2_1337 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D TRQ2_0164 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TRQ2_1388 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TRQ2_1367 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D TRQ2_1377 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TRQ2_0333 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TRQ2_1398 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TRQ2_1380 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TRQ2_1345 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TRQ2_1395 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TRQ2_1368 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TRQ2_1399 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TRQ2_1369 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TRQ2_1381 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TRQ2_1485 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TRQ2_1229 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TRQ2_1385 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TRQ2_0331 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TRQ2_1390 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TRQ2_1172 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TRQ2_0480 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TRQ2_1391 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TRQ2_1394 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TRQ2_1393 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TRQ2_1382 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TRQ2_1379 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TRQ2_0064 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TRQ2_0479 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TRQ2_0481 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TRQ2_0478 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TRQ2_1346 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TRQ2_1384 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TRQ2_1375 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TRQ2_1387 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TRQ2_1365 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TRQ2_1378 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TRQ2_1234 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TRQ2_1255 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TRQ2_1350 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TRQ2_1389 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TRQ2_1392 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TRQ2_1383 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TRQ2_1348 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TRQ2_0693 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TRQ2_1386 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TRQ2_1376 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TRQ2_1150 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TRQ2_0798 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TRQ2_0484 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TRQ2_1356 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TRQ2_1254 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TRQ2_1370 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TRQ2_1291 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TRQ2_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TRQ2_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TRQ2_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:trq03009]
D TRQ2_1714 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TRQ2_0080 GTP-binding protein Era K03595 era; GTPase
D TRQ2_0849 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TRQ2_1047 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TRQ2_1059 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TRQ2_0482 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TRQ2_0684 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D TRQ2_1329 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TRQ2_1406 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TRQ2_1165 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TRQ2_1441 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TRQ2_1449 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TRQ2_0221 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TRQ2_0055 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TRQ2_0219 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TRQ2_0413 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D TRQ2_1239 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D TRQ2_1084 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TRQ2_0083 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TRQ2_1137 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D TRQ2_0812 Radical SAM domain protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TRQ2_1119 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TRQ2_1722 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TRQ2_1840 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TRQ2_0473 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TRQ2_1201 conserved hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D TRQ2_1231 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D TRQ2_0957 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D TRQ2_1738 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TRQ2_1269 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D TRQ2_1208 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TRQ2_1085 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D TRQ2_1117 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TRQ2_1338 small GTP-binding protein K03977 engA; GTPase
D TRQ2_0158 GTP-binding protein HSR1-related K14540 rbgA; ribosome biogenesis GTPase A
D TRQ2_0410 GTP-binding protein HflX K03665 hflX; GTPase
D TRQ2_0079 GTP-binding protein HSR1-related K06948 yqeH; 30S ribosome assembly GTPase
D TRQ2_0075 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TRQ2_0198 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TRQ2_0072 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TRQ2_1046 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D TRQ2_0801 iojap-like protein K09710 ybeB; ribosome-associated protein
D TRQ2_1403 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D TRQ2_1270 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D TRQ2_1579 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D TRQ2_0797 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:trq03016]
D TRQ2_0063 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D TRQ2_0213 CBS domain containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TRQ2_1472 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D TRQ2_1734 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease
D TRQ2_0944 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TRQ2_0423 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TRQ2_1468 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TRQ2_0780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TRQ2_1732 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TRQ2_1723 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TRQ2_1129 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TRQ2_1333 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TRQ2_1433 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_1099 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TRQ2_0187 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TRQ2_1450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TRQ2_0208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TRQ2_1004 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TRQ2_1726 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_1765 histidyl-tRNA synthetase-related protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TRQ2_0105 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TRQ2_0104 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TRQ2_0457 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TRQ2_0443 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TRQ2_0197 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TRQ2_0179 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D TRQ2_0002 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TRQ2_1237 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TRQ2_0071 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TRQ2_1142 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TRQ2_0075 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TRQ2_0412 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TRQ2_0681 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TRQ2_0685 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TRQ2_1355 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TRQ2_R0005 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D TRQ2_0959 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D TRQ2_0732 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TRQ2_0731 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TRQ2_1420 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D TRQ2_1478 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TRQ2_0851 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TRQ2_0276 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TRQ2_0097 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D TRQ2_0193 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D TRQ2_1232 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TRQ2_0417 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TRQ2_0751 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D TRQ2_0362 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TRQ2_0907 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TRQ2_0136 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TRQ2_0196 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D TRQ2_1224 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TRQ2_1140 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TRQ2_0357 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TRQ2_0053 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TRQ2_0803 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TRQ2_1296 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TRQ2_1407 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D TRQ2_0205 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TRQ2_1484 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:trq03012]
D TRQ2_1332 initiation factor 2B related K03239 EIF2B1; translation initiation factor eIF-2B subunit alpha
D TRQ2_0151 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TRQ2_1253 initiation factor 3 K02520 infC; translation initiation factor IF-3
D TRQ2_1268 translation elongation factor Ts K02357 tsf; elongation factor Ts
D TRQ2_1396 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TRQ2_1397 translation elongation factor G K02355 fusA; elongation factor G
D TRQ2_1178 translation elongation factor G K02355 fusA; elongation factor G
D TRQ2_1466 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TRQ2_1430 ribosome recycling factor K02838 frr; ribosome recycling factor
D TRQ2_0447 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TRQ2_1290 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TRQ2_1371 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TRQ2_1061 translation elongation factor P K02356 efp; elongation factor P
D TRQ2_1242 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:trq03110]
D TRQ2_0750 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TRQ2_1438 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TRQ2_0054 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TRQ2_0802 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TRQ2_0415 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TRQ2_0558 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TRQ2_0430 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TRQ2_0078 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TRQ2_1435 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D TRQ2_0077 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TRQ2_0557 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D TRQ2_0431 chaperonin Cpn10 K04078 groES; chaperonin GroES
D TRQ2_0365 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TRQ2_0356 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TRQ2_1279 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TRQ2_1777 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:trq04131]
D TRQ2_0965 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D TRQ2_1587 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D TRQ2_0241 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TRQ2_0740 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:trq03032]
D TRQ2_0682 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TRQ2_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TRQ2_1089 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TRQ2_1344 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0474 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TRQ2_0360 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TRQ2_0686 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TRQ2_0767 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TRQ2_0439 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TRQ2_0243 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0155 DNA polymerase III gamma/tau subunits-like protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0012 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TRQ2_1733 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TRQ2_0094 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TRQ2_0690 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TRQ2_0775 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:trq03036]
D TRQ2_1714 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TRQ2_0682 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TRQ2_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TRQ2_0411 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TRQ2_1637 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D TRQ2_0442 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D TRQ2_0441 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D TRQ2_0092 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TRQ2_0057 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TRQ2_0715 cell cycle protein K03588 ftsW; cell division protein FtsW
D TRQ2_0091 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TRQ2_1761 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TRQ2_0949 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TRQ2_1207 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0088 cell cycle protein K05837 rodA; rod shape determining protein RodA
D TRQ2_0685 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TRQ2_0221 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TRQ2_0193 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D TRQ2_1823 integrase family protein K04763 xerD; integrase/recombinase XerD
D TRQ2_1256 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TRQ2_1359 small GTP-binding protein K03978 engB; GTP-binding protein
D TRQ2_1126 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:trq03400]
D TRQ2_0040 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TRQ2_0566 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TRQ2_0426 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TRQ2_0570 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D TRQ2_0954 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D TRQ2_1209 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TRQ2_0847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TRQ2_1283 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TRQ2_0455 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TRQ2_1063 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TRQ2_0683 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TRQ2_1581 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TRQ2_0477 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TRQ2_0476 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TRQ2_1366 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TRQ2_1146 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TRQ2_1342 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TRQ2_1115 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1828 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1829 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D TRQ2_1541 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TRQ2_0923 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TRQ2_1056 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TRQ2_1055 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TRQ2_0474 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TRQ2_0360 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TRQ2_0686 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TRQ2_0767 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TRQ2_0439 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TRQ2_0243 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0155 DNA polymerase III gamma/tau subunits-like protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0960 recA protein K03553 recA; recombination protein RecA
D TRQ2_0783 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TRQ2_1095 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TRQ2_0361 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TRQ2_0770 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TRQ2_1300 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D TRQ2_1299 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D TRQ2_0749 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TRQ2_0743 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TRQ2_1023 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TRQ2_1733 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TRQ2_0094 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TRQ2_0690 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TRQ2_0682 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TRQ2_1735 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TRQ2_0961 regulatory protein RecX K03565 recX; regulatory protein
D TRQ2_0829 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TRQ2_1258 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:trq03029]
D TRQ2_0151 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TRQ2_1253 initiation factor 3 K02520 infC; translation initiation factor IF-3
D TRQ2_1268 translation elongation factor Ts K02357 tsf; elongation factor Ts
D TRQ2_1396 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TRQ2_1397 translation elongation factor G K02355 fusA; elongation factor G
D TRQ2_1178 translation elongation factor G K02355 fusA; elongation factor G
D TRQ2_0080 GTP-binding protein Era K03595 era; GTPase
D TRQ2_0457 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TRQ2_0780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TRQ2_1333 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TRQ2_1723 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TRQ2_1547 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TRQ2_1546 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TRQ2_0696 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TRQ2_0332 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TRQ2_0558 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TRQ2_0077 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TRQ2_0430 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TRQ2_0431 chaperonin Cpn10 K04078 groES; chaperonin GroES
D TRQ2_0078 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TRQ2_1142 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TRQ2_1256 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TRQ2_1353 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:trq02000]
D TRQ2_1564 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0902 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0650 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_0649 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TRQ2_1498 ABC transporter related K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D TRQ2_1506 ABC transporter related K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D TRQ2_1454 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D TRQ2_1451 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein
D TRQ2_1452 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D TRQ2_1453 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D TRQ2_0746 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TRQ2_0451 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TRQ2_0745 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D TRQ2_0744 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TRQ2_0452 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TRQ2_0984 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_1614 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D TRQ2_0985 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein
D TRQ2_1615 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein
D TRQ2_0986 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein
D TRQ2_1616 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein
D TRQ2_1543 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TRQ2_1586 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TRQ2_0970 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D TRQ2_0971 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D TRQ2_0972 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D TRQ2_0116 extracellular solute-binding protein family 1 K17244 chiE; putative chitobiose transport system substrate-binding protein
D TRQ2_0115 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein
D TRQ2_0114 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein
D TRQ2_0512 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D TRQ2_0513 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D TRQ2_0514 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D TRQ2_0833 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0973 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TRQ2_0974 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TRQ2_0835 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TRQ2_0832 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TRQ2_0975 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TRQ2_1696 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D TRQ2_1695 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D TRQ2_1694 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D TRQ2_0845 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D TRQ2_0843 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D TRQ2_0842 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D TRQ2_0844 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D TRQ2_0755 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D TRQ2_0754 ABC transporter related K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D TRQ2_1583 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TRQ2_0661 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TRQ2_0340 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TRQ2_0671 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TRQ2_0339 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TRQ2_0660 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TRQ2_0670 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TRQ2_1584 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TRQ2_0338 Monosaccharide-transporting ATPase K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TRQ2_0669 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TRQ2_0659 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TRQ2_1585 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TRQ2_1556 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TRQ2_1557 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D TRQ2_1558 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TRQ2_1559 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TRQ2_0342 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D TRQ2_0343 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D TRQ2_0344 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D TRQ2_1676 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TRQ2_1675 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D TRQ2_1674 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D TRQ2_1673 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TRQ2_1672 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TRQ2_1645 metal dependent phosphohydrolase K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TRQ2_1079 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TRQ2_1078 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TRQ2_1077 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TRQ2_1076 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TRQ2_1075 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TRQ2_0510 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0876 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0406 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0890 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1666 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1619 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0914 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0622 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0631 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1592 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_1595 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0475 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0500 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TRQ2_0509 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0875 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0405 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0886 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1667 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1620 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0915 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0630 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_1596 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0432 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TRQ2_0508 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0874 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0404 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0887 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1621 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1663 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0916 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0629 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_1597 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0433 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TRQ2_0507 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0873 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0888 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1624 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1664 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0917 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0628 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_1598 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0437 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0434 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TRQ2_0889 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0506 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0407 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0435 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0627 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0872 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0918 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1599 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1622 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_1665 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TRQ2_0759 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TRQ2_0758 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D TRQ2_0757 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TRQ2_0867 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D TRQ2_0868 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D TRQ2_0869 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D TRQ2_0824 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D TRQ2_0822 ABC-3 protein K09816 znuB; zinc transport system permease protein
D TRQ2_0823 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TRQ2_0127 BioY protein K03523 bioY; biotin transport system substrate-specific component
D TRQ2_0951 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D TRQ2_1166 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TRQ2_0726 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TRQ2_1754 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TRQ2_1779 ABC transporter, permease protein, putative K25147 berB; beta-exotoxin I transport system permease protein
D TRQ2_1780 ABC transporter related K25148 berA; beta-exotoxin I transport system ATP-binding protein
D TRQ2_1517 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0394 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_1518 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0132 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0552 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0553 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_1426 daunorubicin resistance ABC transporter, inner membrane subunit B K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_1500 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_1716 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0162 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D TRQ2_0161 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_0393 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_0134 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_0554 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_1499 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_1427 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_1519 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_1302 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TRQ2_0584 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TRQ2_0222 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TRQ2_0583 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TRQ2_0223 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TRQ2_1310 ABC transporter related K09013 sufC; Fe-S cluster assembly ATP-binding protein
D TRQ2_1461 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D TRQ2_0111 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D TRQ2_1133 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TRQ2_1797 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D TRQ2_1776 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D TRQ2_1266 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TRQ2_0637 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TRQ2_0638 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TRQ2_0639 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D TRQ2_0640 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TRQ2_1751 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D TRQ2_0532 ammonium transporter K03320 amt; ammonium transporter, Amt family
D TRQ2_1226 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D TRQ2_1654 response regulator receiver protein K06213 mgtE; magnesium transporter
D TRQ2_0253 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TRQ2_0252 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TRQ2_0376 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D TRQ2_0925 CrcB protein K06199 crcB; fluoride exporter
D TRQ2_0082 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TRQ2_0289 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TRQ2_0399 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D TRQ2_1087 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D TRQ2_0203 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D TRQ2_1727 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D TRQ2_1728 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D TRQ2_1729 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D TRQ2_0107 uracil-xanthine permease K02824 uraA; uracil permease
D TRQ2_0341 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D TRQ2_1002 Chromate transporter K07240 chrA; chromate transporter
D TRQ2_1003 Chromate transporter K07240 chrA; chromate transporter
D TRQ2_0611 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D TRQ2_0609 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein
D TRQ2_0610 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D TRQ2_1706 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D TRQ2_1609 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D TRQ2_1712 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TRQ2_1608 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TRQ2_1607 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TRQ2_1711 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TRQ2_1613 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TRQ2_1710 conserved hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TRQ2_1612 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TRQ2_1709 conserved hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TRQ2_1611 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TRQ2_1708 conserved hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TRQ2_0861 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TRQ2_0719 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TRQ2_0520 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TRQ2_1480 protein of unknown function UPF0118 K03548 perM; putative permease
D TRQ2_1347 membrane protein-like protein K23675 fmnP; riboflavin transporter
D TRQ2_0135 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter
D TRQ2_0328 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter
D TRQ2_0715 cell cycle protein K03588 ftsW; cell division protein FtsW
D TRQ2_0774 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D TRQ2_0047 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D TRQ2_0819 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D TRQ2_0212 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D TRQ2_0210 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D TRQ2_0211 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D TRQ2_1670 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D TRQ2_0284 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D TRQ2_0896 FeoA family protein K04758 feoA; ferrous iron transport protein A
D TRQ2_0895 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:trq02044]
D TRQ2_1138 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TRQ2_1548 type IV pilin-related protein K02650 pilA; type IV pilus assembly protein PilA
D TRQ2_0090 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D TRQ2_0853 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D TRQ2_1467 twitching motility protein K02669 pilT; twitching motility protein PilT
D TRQ2_1093 protein of unknown function YGGT K02221 yggT; YggT family protein
D TRQ2_1756 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D TRQ2_0530 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TRQ2_1049 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D TRQ2_1247 phosphoribosyltransferase K02242 comFC; competence protein ComFC
D TRQ2_0019 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TRQ2_0018 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TRQ2_1160 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D TRQ2_0727 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TRQ2_0730 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TRQ2_0249 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TRQ2_0229 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TRQ2_0230 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TRQ2_0231 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TRQ2_0017 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TRQ2_1241 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TRQ2_0067 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TRQ2_0483 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TRQ2_0066 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TRQ2_0456 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TRQ2_1374 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TRQ2_1228 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TRQ2_0366 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TRQ2_0068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TRQ2_1353 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:trq02042]
D TRQ2_0082 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:trq02022]
D TRQ2_1175 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TRQ2_0074 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_0820 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_1562 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TRQ2_1561 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D TRQ2_0226 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TRQ2_0228 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TRQ2_0526 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:trq02035]
D TRQ2_0226 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TRQ2_0209 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_0227 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TRQ2_1282 CheC domain protein K03409 cheX; chemotaxis protein CheX
D TRQ2_0023 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D TRQ2_0024 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TRQ2_0471 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TRQ2_0526 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TRQ2_0228 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TRQ2_1321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0564 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0009 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0515 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0922 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TRQ2_0730 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TRQ2_0425 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TRQ2_0229 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TRQ2_0230 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TRQ2_0231 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TRQ2_0017 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TRQ2_0019 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TRQ2_0018 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TRQ2_0728 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TRQ2_0250 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TRQ2_0249 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TRQ2_0727 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TRQ2_1202 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D TRQ2_1204 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TRQ2_1203 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TRQ2_0251 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TRQ2_1463 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TRQ2_1465 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TRQ2_1464 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TRQ2_0256 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TRQ2_1206 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF
D TRQ2_1205 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TRQ2_0294 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D TRQ2_0255 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D TRQ2_0864 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TRQ2_0865 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TRQ2_0816 flagellin domain protein K02406 fliC; flagellin
D TRQ2_0168 flagellin domain protein K02406 fliC; flagellin
D TRQ2_1693 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TRQ2_1640 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TRQ2_0025 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D TRQ2_0253 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TRQ2_0252 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TRQ2_0866 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW
D TRQ2_0862 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TRQ2_1692 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D TRQ2_0254 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D TRQ2_0020 GTP-binding signal recognition particle SRP54 G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D TRQ2_0021 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TRQ2_1467 twitching motility protein K02669 pilT; twitching motility protein PilT
D TRQ2_1548 type IV pilin-related protein K02650 pilA; type IV pilus assembly protein PilA
D TRQ2_0090 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D TRQ2_0853 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D TRQ2_1138 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:trq04812]
D TRQ2_0860 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D TRQ2_1207 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0091 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TRQ2_0092 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TRQ2_1761 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TRQ2_0949 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
C 04147 Exosome [BR:trq04147]
D TRQ2_0050 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TRQ2_0241 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TRQ2_0240 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TRQ2_0740 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TRQ2_0119 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D TRQ2_0430 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TRQ2_0558 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TRQ2_1444 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TRQ2_1482 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TRQ2_1396 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TRQ2_0952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TRQ2_0776 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TRQ2_1373 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TRQ2_1445 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TRQ2_1044 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TRQ2_1045 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TRQ2_0625 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D TRQ2_1628 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TRQ2_1322 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TRQ2_1837 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TRQ2_0793 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D TRQ2_0606 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TRQ2_1571 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TRQ2_0546 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TRQ2_1194 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D TRQ2_1790 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TRQ2_1661 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TRQ2_0239 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:trq02048]
D TRQ2_1023 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TRQ2_1024 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D TRQ2_1021 CRISPR-associated HD domain protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TRQ2_1022 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TRQ2_1007 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D TRQ2_1018 CRISPR-associated protein, TM1802 family K19114 csh1; CRISPR-associated protein Csh1
D TRQ2_1019 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D TRQ2_1020 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h
D TRQ2_1009 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D TRQ2_1010 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D TRQ2_1011 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D TRQ2_1012 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D TRQ2_1013 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D TRQ2_1025 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D TRQ2_0313 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D TRQ2_1026 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D TRQ2_0314 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2
D TRQ2_1027 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3
D TRQ2_1028 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D TRQ2_0316 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D TRQ2_1029 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D TRQ2_1030 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D TRQ2_0605 DNA methylase N-4/N-6 domain protein K24451 zim; modification methylase
D TRQ2_1660 phage shock protein C, PspC K03973 pspC; phage shock protein C
D TRQ2_0091 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TRQ2_1207 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0348 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TRQ2_0944 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TRQ2_1142 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:trq04090]
C 01504 Antimicrobial resistance genes [BR:trq01504]
D TRQ2_1201 conserved hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:trq00537]
D TRQ2_0793 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:trq03100]
D TRQ2_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TRQ2_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TRQ2_R0051 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TRQ2_R0034 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TRQ2_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TRQ2_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TRQ2_R0017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TRQ2_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TRQ2_R0032 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TRQ2_R0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TRQ2_R0023 tRNA-His K14226 tRNA-His; tRNA His
D TRQ2_R0029 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TRQ2_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TRQ2_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TRQ2_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TRQ2_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0015 tRNA-Met K14230 tRNA-Met; tRNA Met
D TRQ2_R0039 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TRQ2_R0031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TRQ2_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TRQ2_R0018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TRQ2_R0012 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TRQ2_R0013 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TRQ2_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D TRQ2_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TRQ2_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TRQ2_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TRQ2_R0052 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D TRQ2_R0005 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D TRQ2_R0007 ssrA; tmRNA as predicted by Rfam (RF00023), score 179.08 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TRQ2_1796 2,5-didehydrogluconate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D TRQ2_1195 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D TRQ2_0146 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D TRQ2_0551 nitroreductase K24130 K24130; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D TRQ2_0934 ferredoxin-like protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D TRQ2_0747 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D TRQ2_1319 hydrogenase large subunit domain protein K17997 hydA; iron-hydrogenase subunit alpha [EC:1.12.1.4]
D TRQ2_1318 NADH dehydrogenase (quinone) K17998 hydB; iron-hydrogenase subunit beta [EC:1.12.1.4]
D TRQ2_1317 NADH dehydrogenase (ubiquinone) 24 kDa subunit K17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]
D TRQ2_0271 Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D TRQ2_1683 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D TRQ2_1303 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TRQ2_0549 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D TRQ2_1215 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TRQ2_1582 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TRQ2_0838 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TRQ2_0003 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TRQ2_0224 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TRQ2_0363 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TRQ2_1589 glycosyl transferase family 2 K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D TRQ2_1593 glycosidase PH1107-related K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D TRQ2_0964 glycosidase PH1107-related K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D TRQ2_0575 glycosyl transferase group 1 K23395 E2.4.1.361; GDP-mannose:di-myo-inositol-1,3'-phosphate beta-1,2-mannosyltransferase [EC:2.4.1.361]
D TRQ2_1825 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D TRQ2_0790 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TRQ2_1216 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TRQ2_1052 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D TRQ2_0748 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D TRQ2_1784 esterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D TRQ2_0597 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein K24085 estD; esterase [EC:3.1.1.1]
D TRQ2_0378 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D TRQ2_0777 hydrolase, HAD-superfamily, subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D TRQ2_0772 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D TRQ2_1402 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D TRQ2_0762 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D TRQ2_0262 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TRQ2_0885 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D TRQ2_0877 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D TRQ2_1549 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D TRQ2_1617 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D TRQ2_0664 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D TRQ2_0662 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D TRQ2_0891 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D TRQ2_0623 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D TRQ2_1000 DNA-(apurinic or apyrimidinic site) lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D TRQ2_1168 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TRQ2_0834 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TRQ2_0733 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D TRQ2_1679 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TRQ2_0269 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D TRQ2_0005 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TRQ2_1742 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D TRQ2_1824 PP-loop domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D TRQ2_1826 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D TRQ2_0703 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D TRQ2_0704 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D TRQ2_0699 Fe-S cluster domain protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
D TRQ2_0371 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D TRQ2_0035 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D TRQ2_1671 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D TRQ2_1853 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin
D TRQ2_0702 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D TRQ2_0701 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D TRQ2_0700 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D TRQ2_1457 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D TRQ2_1193 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D TRQ2_1196 4Fe-4S ferredoxin iron-sulfur binding domain protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D TRQ2_1362 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TRQ2_1094 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D TRQ2_0465 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D TRQ2_1439 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TRQ2_0945 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D TRQ2_1151 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D TRQ2_0531 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D TRQ2_0562 conserved hypothetical protein K07745 K07745; transcriptional regulator
D TRQ2_1144 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D TRQ2_1149 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D TRQ2_0234 trigger factor domain protein K03545 tig; trigger factor
D TRQ2_0694 SsrA-binding protein K03664 smpB; SsrA-binding protein
D TRQ2_0424 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D TRQ2_0008 OsmC family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D TRQ2_1808 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase
D TRQ2_1523 ribonuclease H K06993 K06993; ribonuclease H-related protein
D TRQ2_1220 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D TRQ2_0547 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D TRQ2_0695 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D TRQ2_0698 DNA protecting protein DprA K04096 smf; DNA processing protein
D TRQ2_0429 Appr-1-p processing domain protein K07478 ycaJ; putative ATPase
D TRQ2_0149 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D TRQ2_0990 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D TRQ2_0574 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D TRQ2_0899 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_0573 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_1764 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_1629 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_0991 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_0133 transposase K07496 K07496; putative transposase
D TRQ2_0150 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TRQ2_1156 transposase, IS605 OrfB family K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TRQ2_0559 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D TRQ2_0687 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TRQ2_0010 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TRQ2_1707 conserved hypothetical protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D TRQ2_1352 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D TRQ2_0756 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D TRQ2_1749 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D TRQ2_0030 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D TRQ2_1401 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TRQ2_0440 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D TRQ2_1755 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
C 99994 Others
D TRQ2_1560 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D TRQ2_1091 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D TRQ2_1752 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TRQ2_0216 Patatin K07001 K07001; NTE family protein
D TRQ2_0287 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D TRQ2_1460 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D TRQ2_1831 LemA family protein K03744 lemA; LemA protein
D TRQ2_0784 protein of unknown function DUF368 K08974 K08974; putative membrane protein
D TRQ2_1199 protein of unknown function DUF981 K08980 K08980; putative membrane protein
D TRQ2_0616 membrane protein-like protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D TRQ2_1520 radical SAM domain protein K06871 K06871; uncharacterized protein
D TRQ2_1501 Radical SAM domain protein K06871 K06871; uncharacterized protein
D TRQ2_1502 Radical SAM domain protein K06871 K06871; uncharacterized protein
D TRQ2_1508 Radical SAM domain protein K06871 K06871; uncharacterized protein
D TRQ2_1830 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D TRQ2_1210 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D TRQ2_1794 ATPase K06921 K06921; uncharacterized protein
D TRQ2_1821 ATPase K06921 K06921; uncharacterized protein
D TRQ2_1807 protein of unknown function DUF499 K06922 K06922; uncharacterized protein
D TRQ2_1327 CoA-binding domain protein K06929 K06929; uncharacterized protein
D TRQ2_1035 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D TRQ2_1230 RNA-binding protein (contains KH domain)-like protein K06960 K06960; uncharacterized protein
D TRQ2_1405 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D TRQ2_1704 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein
D TRQ2_1525 conserved hypothetical protein K07003 K07003; uncharacterized protein
D TRQ2_0109 conserved hypothetical protein K07003 K07003; uncharacterized protein
D TRQ2_1309 SufBD protein K07033 K07033; uncharacterized protein
D TRQ2_0319 PilT protein domain protein K07063 K07063; uncharacterized protein
D TRQ2_0280 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D TRQ2_1636 aldo/keto reductase K07079 K07079; uncharacterized protein
D TRQ2_1802 permease K07089 K07089; uncharacterized protein
D TRQ2_0555 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TRQ2_0718 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D TRQ2_1715 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D TRQ2_1741 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D TRQ2_1265 3H domain protein K07105 K07105; uncharacterized protein
D TRQ2_1555 AAA ATPase K07133 K07133; uncharacterized protein
D TRQ2_0321 AAA ATPase K07133 K07133; uncharacterized protein
D TRQ2_0336 uncharacterized FAD-dependent dehydrogenase-like protein K07137 K07137; uncharacterized protein
D TRQ2_0911 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein
D TRQ2_0422 conserved hypothetical radical SAM protein K07139 K07139; uncharacterized protein
D TRQ2_0722 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D TRQ2_1354 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D TRQ2_0788 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D TRQ2_1161 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D TRQ2_1739 protein of unknown function DUF501 K09009 K09009; uncharacterized protein
D TRQ2_1791 protein of unknown function DUF505 K09010 K09010; uncharacterized protein
D TRQ2_0238 conserved hypothetical protein K09117 K09117; uncharacterized protein
D TRQ2_0147 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D TRQ2_0042 Protein of unknown function DUF1867 K09126 K09126; uncharacterized protein
D TRQ2_0752 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D TRQ2_0454 conserved hypothetical protein K09133 K09133; uncharacterized protein
D TRQ2_0924 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D TRQ2_1214 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D TRQ2_1462 protein of unknown function DUF369 K09143 K09143; uncharacterized protein
D TRQ2_1800 putative PAS/PAC sensor protein K09155 K09155; uncharacterized protein
D TRQ2_0141 conserved hypothetical protein K09700 K09700; uncharacterized protein
D TRQ2_0192 protein of unknown function DUF342 K09749 K09749; uncharacterized protein
D TRQ2_1180 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D TRQ2_0367 conserved hypothetical protein K09766 K09766; uncharacterized protein
D TRQ2_1183 protein of unknown function DUF327 K09770 K09770; uncharacterized protein
D TRQ2_1580 acid phosphatase/vanadium-dependent haloperoxidase related K09775 K09775; uncharacterized protein
D TRQ2_1245 protein of unknown function DUF458 K09776 K09776; uncharacterized protein
D TRQ2_1086 protein of unknown function DUF430 K09785 K09785; uncharacterized protein
D TRQ2_1809 protein of unknown function DUF1175 K09934 K09934; uncharacterized protein
D TRQ2_1331 uncharacterized protein-like protein K09942 K09942; uncharacterized protein
D TRQ2_0668 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D TRQ2_0688 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D TRQ2_0013 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024