+E Transcription factors KO #

  Transcription Factors - Trichinella spiralis

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun D Tsp_05339 transcription factor AP-1 K04448 JUN; transcription factor AP-1 D Tsp_05337 transcription factor AP-1 K04448 JUN; transcription factor AP-1 C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only D Tsp_05967 basic region leucine zipper family protein K09062 GT; protein giant B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors D Tsp_11731 putative helix-loop-helix DNA-binding domain protein K15603 TCF4_12; transcription factor 4/12 C Myogenic transcription factors D Tsp_09507 cuticle collagen 1 K18484 MYF5; myogenic factor 5 C Achaete-Scute D Tsp_11718 achaete-scute protein K09067 ASCL; achaete-scute complex protein D Tsp_12187 helix-loop-helix protein 4 K09067 ASCL; achaete-scute complex protein D Tsp_05704 helix-loop-helix protein 6 K09067 ASCL; achaete-scute complex protein C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors D Tsp_05097 heart- and neural crest derivatives-expressed protein 1 K18486 HAND2; heart-and neural crest derivatives-expressed protein 2 D Tsp_00668 pancreas transcription factor 1 subunit alpha K09073 PTF1A; pancreas-specific transcription factor 1a C Tal/Twist/Atonal/Hen, HEN D Tsp_00809 helix-loop-helix protein K09075 NHLH; nescient helix-loop-helix protein C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal D Tsp_03932 protein lin-32 K09083 ATOH1_7; atonal protein 1/7 D Tsp_05869 protein atonal protein K09084 ATOH8; atonal protein 8 D Tsp_02491 oligodendrocyte transcription factor 2 K09085 BHLHB1_6_7; class B basic helix-loop-helix protein 1/6/7 C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) D Tsp_06034 putative helix-loop-helix DNA-binding domain protein K06054 HES1; hairy and enhancer of split 1 D Tsp_08580 transcription factor HES-2 K09090 HESN; hairy and enhancer of split, invertebrate C Hairy, Fungal regulators C Factors with PAS domain D Tsp_10414 muscle cell intermediate filament protein OV71 K09097 ARNT; aryl hydrocarbon receptor nuclear translocator D Tsp_01272 putative helix-loop-helix DNA-binding domain protein K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 C Yabby C INO C HLH domain only D Tsp_00399 DNA-binding protein inhibitor ID-1 K17696 EMC; DNA-binding protein inhibitor ID, other D Tsp_09969 putative transcription factor COE1 K09103 EBF; early B-cell factor B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors D Tsp_10832 putative helix-loop-helix DNA-binding domain protein K09105 TFE3; transcription factor E3 C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max D Tsp_01750 protein WBSCR14-like protein K09113 MLX; MAX-like protein X C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X D Tsp_07936 putative transcription factor RFX3 K09173 RFX1_2_3; regulatory factor X 1/2/3 C AP-2 (bHSH) D Tsp_09566 transcription factor AP-2 superfamily K09176 TFAP2A_B; transcription factor AP-2 alpha/beta D Tsp_11744 transcription factor AP-2 alpha K09176 TFAP2A_B; transcription factor AP-2 alpha/beta B Zinc finger C Cys4 thyroid hormone receptor-like D Tsp_09475 putative ligand-binding domain of nuclear hormone receptor K08362 THRB; thyroid hormone receptor beta D Tsp_09528 nuclear hormone receptor family member nhr-23 K14033 NR1F4; nuclear receptor subfamily 1 group F member 4 D Tsp_00867 ecdysone receptor K14034 NR1H1; ecdysone receptor C Cys4 hepatocyte nuclear factor 4-like D Tsp_10110 putative ligand-binding domain of nuclear hormone receptor K07292 NR2A1; hepatocyte nuclear factor 4-alpha D Tsp_06907 protein tailless K08545 NR2E1; nuclear receptor subfamily 2 group E member 1 D Tsp_06560 photoreceptor-specific nuclear receptor K08546 NR2E3; nuclear receptor subfamily 2 group E member 3 D Tsp_10103 COUP transcription factor 1 K08547 NR2F1; COUP transcription factor 1 C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like D Tsp_06402 nuclear receptor subfamily 4 group A member 1 K04465 NR4A1; nuclear receptor subfamily 4 group A member 1 C Cys4 Fushi tarazu-F1-like D Tsp_04383 putative ligand-binding domain of nuclear hormone receptor K08705 NR5A3; nuclear receptor subfamily 5 group A member 3 C Cys4 germ cell nuclear factor D Tsp_04327 nuclear hormone receptor family member nhr-91 K09185 NR6AN; nuclear receptor subfamily 6 group A C Cys4 Knirps/DAX1-like C Cys4 GATA-factors D Tsp_09534 putative ELM2 domain protein K05628 RERE; arginine-glutamic acid dipeptide repeats protein D Tsp_09343 putative ELM2 domain protein K11660 MTA; metastasis-associated protein MTA D Tsp_09280 putative PWWP domain protein K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37] D Tsp_00477a putative immunoglobulin domain protein K10779 ATRX; transcriptional regulator ATRX C Cys2His2 SP/KLF family and related proteins D Tsp_09494 zinc finger protein K09195 SP5; transcription factor Sp5 D Tsp_05506 zinc finger protein K09200 SP-N; transcription factor Sp, invertebrate D Tsp_05538 zinc finger protein K17846 KLF4; krueppel-like factor 4 D Tsp_08261 zinc finger protein K09206 KLF5; krueppel-like factor 5 D Tsp_12288 zinc finger protein K09206 KLF5; krueppel-like factor 5 C Cys2His2 GLI-like D Tsp_04779 zinc finger protein K16799 CI; transcriptional activator cubitus interruptus C Cys2His2 Snail D Tsp_11614 protein escargot K05706 SNAI2; snail 2 D Tsp_09509 transcriptional repressor scratch 2 K09219 SCRT; scratch D Tsp_07599 insulinoma-associated protein 2 K25795 INSM; insulinoma-associated protein C Cys2His2 BTB-ZF factors D Tsp_04005 zinc finger protein K10500 ZBTB17; zinc finger and BTB domain-containing protein 17 C Cys2His2 BED C Cys2His2 PRDM D Tsp_11641 putative protein kinase domain protein K24501 PRDM1; PR domain zinc finger protein 1 [EC:2.1.1.-] C Cys2His2 metabolic regulators in fungi C Cys2His2 others D Tsp_12917 zinc finger protein K09215 OSR; odd-skipped D Tsp_03973 protein bowel K09215 OSR; odd-skipped D Tsp_05962 zinc finger protein K09223 GFI1; growth factor independent 1 D Tsp_03908 zinc finger protein K17452 AEBP2; zinc finger protein AEBP2 D Tsp_06840 zinc finger protein K22045 BCL11A; B-cell lymphoma/leukemia 11A D Tsp_08847 zinc finger protein K23195 CTCF; transcriptional repressor CTCF D Tsp_05655 zinc finger protein K24146 BNC; zinc finger protein basonuclin D Tsp_07124 replication protein ADNA-binding subunit K07466 RFA1; replication factor A1 D Tsp_08212 zinc finger protein K23480 ZNF362_384; zinc finger protein 362/384 D Tsp_08822 zinc finger protein 423-like protein K22870 ZNF423; zinc finger protein 423 D Tsp_02771 zinc finger protein K09228 KRAB; KRAB domain-containing zinc finger protein D Tsp_05786 Fez family zinc finger protein 2 K24502 FEZF; Fez family zinc finger protein D Tsp_12536a Fez family zinc finger protein 1 K24502 FEZF; Fez family zinc finger protein D Tsp_10052 zinc finger protein K25794 HINFP; histone H4 transcription factor D Tsp_03694 zinc finger protein K09213 HB; hunchback C Cys2HisCys zinc factors D Tsp_05668 zinc finger protein K23192 MYT1; myelin transcription factor 1 D Tsp_12324 putative histone acetyltransferase MYST1 K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48] D Tsp_06212 putative histone acetyltransferase MYST1 K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48] D Tsp_08056 putative histone acetyltransferase MYST1 K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48] D Tsp_05023 histone acetyltransferase HTATIP K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] D Tsp_02224 cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D Tsp_02372 putative CpG-binding protein K14960 CXXC1; COMPASS component SPP1 C Cys6 metabolic regulators in fungi C Other zinc fingers D Tsp_05458 putative hepatocellular carcinoma-associated antigen 127 K24369 ZC4H2; zinc finger C4H2 domain-contaning protein D Tsp_03430 interferon regulatory factor 2-binding protein 2-B K22383 IRF2BP; interferon regulatory factor 2-binding protein B Helix-turn-helix C Homeo domain ANTP: HOXL D Tsp_00887 homeotic protein labial K09301 HOX_1; homeobox protein HoxA/B/D1 D Tsp_06377 homeobox protein Hox-A4 K09305 HOX_5; homeobox protein HoxA/B/C5 D Tsp_06373 homeobox protein Hox-A7 K09307 HOX_7; homeobox protein HoxA/B7 D Tsp_00888 homeobox protein CDX-1 K09312 CDX1_4; homeobox protein CDX1/4 D Tsp_01337 homeobox even-skipped protein 1 K09320 EVX; homeobox even-skipped homolog protein D Tsp_01432 homeobox even-skipped protein 1 K09320 EVX; homeobox even-skipped homolog protein C Homeo domain ANTP: NKL D Tsp_02063 homeobox protein SAX-1 K09309 NKX1; homeobox protein Nkx-1 D Tsp_02071 homeobox protein SAX-1 K09309 NKX1; homeobox protein Nkx-1 D Tsp_02798 homeobox protein Nkx-2.4 K09342 NKX2-1; homeobox protein Nkx-2.1 D Tsp_06096a homeobox protein Nkx-2.2a K08029 NKX2-2; homeobox protein Nkx-2.2 D Tsp_00358 homeobox protein HMX1 K09349 NKX5; homeobox protein Nkx-5 D Tsp_06645 homeobox protein Nkx-6.2 K08030 NKX6-1; homeobox protein Nkx-6.1 D Tsp_13445 homeobox protein Nkx-6.3 K08030 NKX6-1; homeobox protein Nkx-6.1 D Tsp_05079 T-cell leukemia homeobox protein 3 K15607 TLX3; T-cell leukemia homeobox protein 3 D Tsp_08676 putative homeobox domain protein K09317 EMX; homeobox protein EMX D Tsp_01901 homeobox protein engrailed-1 K09319 EN; homeobox protein engrailed D Tsp_06767 homeobox protein ceh-30 K09360 BARHL; BarH-like D Tsp_06769 putative homeobox domain protein K09360 BARHL; BarH-like C Homeo domain Paired-related D Tsp_07961 homeobox protein goosecoid K09324 GSC; homeobox protein goosecoid D Tsp_07781 homeobox protein OTX2 K18490 OTX2; homeobox protein OTX2 D Tsp_05344 ALX homeobox protein 1 K09328 UNC4; homeobox protein Unc-4 D Tsp_05175 homeobox protein SMOX-3 K09330 PHOX2; paired mesoderm homeobox protein 2 D Tsp_05694 retinal homeobox protein Rax K09332 RAX; retina and anterior neural fold homeobox protein D Tsp_01482 homeobox protein ceh-10 K09336 VSX2; visual system homeobox protein 2 D Tsp_05813 pituitary homeobox 1 K09356 PITX1; paired-like homeodomain transcription factor 1 D Tsp_08869 paired box protein Pax-9 K09382 PAX1_9; paired box protein 1/9 D Tsp_03504 putative paired box protein Pax-2 K15608 PAX2; paired box protein 2 D Tsp_01075 paired box protein Pax-6 K08031 PAX6; paired box protein 6 C Homeo domain LIM D Tsp_12493 LIM homeobox transcription factor 1 alpha K09371 LMX1; LIM homeobox transcription factor 1 D Tsp_08446 LIM/homeobox protein Lhx3 K09371 LMX1; LIM homeobox transcription factor 1 D Tsp_11811 LIM/homeobox protein Lhx1 K09372 LHX1; LIM homeobox protein 1 D Tsp_06736 LIM/homeobox protein Lhx9 K09373 LHX2_9; LIM homeobox protein 2/9 D Tsp_03564 LIM/homeobox protein Lhx3 K09374 LHX3_4; LIM homeobox protein 3/4 D Tsp_01053 cysteine and glycine-rich protein 1 K09377 CSRP; cysteine and glycine-rich protein C Homeo domain POU D Tsp_01181 POU domain, class 4, transcription factor 1 K09366 POU4F; POU domain transcription factor, class 4 D Tsp_07763 putative homeobox domain protein K24885 HMBOX1; homeobox-containing protein 1 C Homeo domain SINE D Tsp_07669 homeobox protein SIX2 K19472 SIX2; homeobox protein SIX2 D Tsp_11472 homeobox protein SIX4 K15615 SIX4; homeobox protein SIX4 C Homeo domain ZF D Tsp_05285 putative homeobox domain protein K09378 ZFHX3; zinc finger homeobox protein 3 D Tsp_07819 zinc finger protein K23560 ZEB2; zinc finger homeobox protein 2 C Homeo domain CUT D Tsp_02003 putative CUT domain protein K09313 CUTL; homeobox protein cut-like D Tsp_02017 putative CUT domain protein K09313 CUTL; homeobox protein cut-like D Tsp_04360 putative CUT domain protein K08026 ONECUT1; one cut domain, family member 1 (hepatocyte nuclear factor 6) C Homeo domain PROS D Tsp_11459 hypothetical protein K20211 PROX1; prospero homeobox 1 C Homeo domain TALE D Tsp_00508 Pre-B-cell leukemia transcription factor 1 K09355 PBX1; pre-B-cell leukemia transcription factor 1 D Tsp_11406 putative iroquois-class homeodomain protein IRX-6 K24889 IRX; iroquois-class homeodomain protein IRX C Homeo domain other C Fork head/winged helix developmental regulators D Tsp_03204 forkhead box protein G1 K09385 FOXG; forkhead box protein G D Tsp_03011 forkhead box protein N4 K09407 FOXN; forkhead box protein N C Fork head/winged helix tissue-specific regulators D Tsp_07495 forkhead box protein J1 K09402 FOXJ1; forkhead box protein J1 C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP D Tsp_02025 transcription factor Dp-1 K04683 TFDP1; transcription factor Dp-1 C Fork head/winged helix other regulators D Tsp_07791 forkhead box protein E1 K09395 FOXB; forkhead box protein B D Tsp_08854 forkhead box protein D3 K09397 FOXD; forkhead box protein D D Tsp_09395 forkhead box protein F1 K09399 FOXF; forkhead box protein F D Tsp_05194 putative fork head domain protein K09404 FOXK; forkhead box protein K D Tsp_10373 putative fork head domain protein K09408 FOXO3; forkhead box protein O3 D Tsp_03068 forkhead box protein P1 K23582 FOXP1; forkhead box protein P1 C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type D Tsp_09093 ETS factor K17102 EHF; ETS homologous factor D Tsp_02690 ETS domain-containing protein Elk-1 K09430 ELK3; ETS domain-containing protein Elk-3 (SRF accessory protein 2) D Tsp_13077 protein C-ets-2-B K02678 ETS1; C-ets-1 D Tsp_02297 protein C-ets-1-B K21932 ETS2; C-ets-2 D Tsp_11097 Ets-domain protein K09435 ERG; transcriptional regulator ERG D Tsp_08802 friend leukemia integration 1 transcription factor K09436 FLI1; friend leukemia integration 1 transcription factor C Tryptophan clusters interferon-regulating factors C TEA domain D Tsp_09605 transcriptional enhancer factor TEF-5 K09448 TEAD; transcriptional enhancer factor C ARID D Tsp_09548 cuticle collagen rol-6 K11653 ARID1; AT-rich interactive domain-containing protein 1 D Tsp_05684 protein dead ringer K25856 ARID3; AT-rich interactive domain-containing protein 3 B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only D Tsp_03741 putative tetratricopeptide repeat-containing domain protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2 C RHR (Rel homology region) NF-AT C STAT D Tsp_04456 signal transducer and activator of transcription 1 K11224 STAT5B; signal transducer and activator of transcription 5B C p53 D Tsp_05266 putative cellular tumor antigen p53 K04451 TP53; tumor protein p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals D Tsp_03174 serum response factor K04378 SRF; serum response factor C SAND domain-containing proteins C TATA-binding proteins D Tsp_05781 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Tsp_11535 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C HMG SOX D Tsp_04170 SOX-1 protein K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B) D Tsp_06143 transcription factor SOX-3 K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B) D Tsp_00998 putative HMG box K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D) D Tsp_03002 hypothetical protein K20225 CIC; capicua transcriptional repressor C HMG TCF-1 D Tsp_02818 protein pangolin, isoforms A/H/I K04491 TCF7L2; transcription factor 7-like 2 C HMG2-related D Tsp_07406 FACT complex subunit Ssrp1 K09272 SSRP1; FACT complex subunit SSRP1/POB3 C UBF C Other HMG box factors C Heteromeric CCAAT factors D Tsp_11549 putative nuclear transcription factor Y subunit alpha K08064 NFYA; nuclear transcription factor Y, alpha D Tsp_06063 nuclear transcription factor Y subunit B K08065 NFYB; nuclear transcription Y subunit beta D Tsp_00857 nuclear transcription factor Y subunit gamma K08066 NFYC; nuclear transcription factor Y, gamma C Grainyhead D Tsp_10077 protein grainyhead K09275 TFCP2; transcription factor CP2 and related proteins C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF D Tsp_02078 NDT80 / PhoG like DNA-binding family protein K24768 MYRF; myelin regulatory factor [EC:3.4.-.-] B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP D Tsp_00559 putative bromodomain protein K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48] C T-box D Tsp_02154 T-box protein H15 K10175 TBX1; T-box protein 1 D Tsp_07342 T-box transcription factor TBX2 K10176 TBX2; T-box protein 2 D Tsp_08082 T-box transcription factor TBX20 K10185 TBX20; T-box protein 20 C DMRT D Tsp_10473 putative DM DNA binding domain protein K19491 DMRT4_5; doublesex- and mab-3-related transcription factor 4/5 C LRRFIP D Tsp_11882 leucine-rich repeat flightless-interacting protein 2 K26434 LRRFIP; leucine-rich repeat flightless-interacting protein C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others D Tsp_02744 suppressor of hairless protein K06053 RBPSUH; recombining binding protein suppressor of hairless D Tsp_09335 PurA ssDNA and RNA-binding protein K21772 PURA; transcriptional activator protein Pur-alpha # AProkaryotic type B Helix-turn-helix C AraC family C LysR family C DeoR family C LacI family C GntR family C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family C MerR family C Fur family C IclR family C CRP/FNR family C Rrf2 family C ArsR family C XRE family C PadR family C Other families B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0