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Transcription Machinery - Thermothielavioides terrestris
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E THITE_2121340 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E THITE_2110960 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E THITE_2124530 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E THITE_2108460 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E THITE_2150040 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E THITE_2112268 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E THITE_2118310 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E THITE_2170468 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E THITE_2119818 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E THITE_2128764 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E THITE_2114571 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E THITE_2121415 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E THITE_2121465 hypothetical protein K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E THITE_2084589 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E THITE_2170357 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E THITE_2170336 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E THITE_2046631 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E THITE_2110255 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E THITE_2122093 TAF1-like protein K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
E THITE_161557 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E THITE_35130 hypothetical protein K14650 TAF3; transcription initiation factor TFIID subunit 3
E THITE_2108140 TAF5-like protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E THITE_2107763 TAF6-like protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E THITE_2113496 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7
E THITE_2113597 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E THITE_2122945 TAF10-like protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E THITE_2106139 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11
E THITE_2117214 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E THITE_2123226 hypothetical protein K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E THITE_2106895 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E THITE_2169599 hypothetical protein K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E THITE_2115577 hypothetical protein K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E THITE_2112481 hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E THITE_2124126 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E THITE_2123698 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E THITE_2123949 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E THITE_2110518 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E THITE_2156915 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E THITE_2119890 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E THITE_2124189 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E THITE_2108493 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E THITE_2018475 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E THITE_2107950 hypothetical protein K06634 CCNH; cyclin H
C Mediator complex
D Head
E THITE_2108345 hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E THITE_2121199 hypothetical protein K15130 MED8; mediator of RNA polymerase II transcription subunit 8, fungi type
E THITE_2112931 hypothetical protein K15134 SRB4; mediator of RNA polymerase II transcription subunit 17, fungi type
D Middle
E THITE_2106983 hypothetical protein K15147 MED5; mediator of RNA polymerase II transcription subunit 5
E THITE_2109482 hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E THITE_2118971 hypothetical protein K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E THITE_2048755 hypothetical protein K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E THITE_2112784 hypothetical protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E THITE_2121580 hypothetical protein K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E THITE_2143523 hypothetical protein K15160 SIN4; mediator of RNA polymerase II transcription subunit 16, fungi type
D CDK-module
E THITE_2109238 hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E THITE_2123506 hypothetical protein K15161 CCNC; cyclin-C
E THITE_2112055 hypothetical protein K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type
E THITE_135495 hypothetical protein K15165 SSN2; mediator of RNA polymerase II transcription subunit 13, fungi type
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
E THITE_115243 histone acetyltransferase GCN5-like protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E THITE_112373 histone acetyltransferase GCN5-like protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E THITE_2107280 TRA1-like protein K08874 TRRAP; transformation/transcription domain-associated protein
E THITE_2115026 SPT3-like protein K11313 SUPT3H; transcription initiation protein SPT3
E THITE_76578 hypothetical protein K11359 SPT7; transcriptional activator SPT7
E THITE_2112646 SPT8-like protein K11360 SPT8; transcriptional activator SPT8
E THITE_2123086 hypothetical protein K11361 SPT20; transcription factor SPT20
E THITE_2108997 hypothetical protein K11362 HFI1; transcriptional coactivator HFI1/ADA1
E THITE_67036 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E THITE_122992 hypothetical protein K11315 TADA3; transcriptional adapter 3
E THITE_161557 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E THITE_2108140 TAF5-like protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E THITE_2107763 TAF6-like protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E THITE_2113496 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7
E THITE_2113597 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E THITE_2122945 TAF10-like protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E THITE_2117214 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E THITE_2109235 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E THITE_130189 hypothetical protein K11365 SGF73; SAGA-associated factor 73
E THITE_2113412 CHD1-like protein K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E THITE_2116631 ubiquitin carboxyl-terminal hydrolase-like protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E THITE_2119532 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E THITE_2118718 SNF5-like protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E THITE_128544 SWI/SNF complex protein-like protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E THITE_74967 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
D SWI/SNF complex
E THITE_2067650 hypothetical protein K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1
E THITE_43808 SNF21-like protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
E THITE_2118718 SNF5-like protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E THITE_2122726 hypothetical protein K11768 ARP9; actin-related protein 9
D RSC complex
E THITE_77005 hypothetical protein K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
E THITE_2114820 hypothetical protein K11761 NPL6; chromatin structure-remodeling complex protein RSC7
E THITE_135489 hypothetical protein K11763 RSC9; chromatin structure-remodeling complex subunit RSC9
E THITE_2122726 hypothetical protein K11768 ARP9; actin-related protein 9
E THITE_54110 hypothetical protein K11770 SFH1; chromatin structure-remodeling complex subunit SFH1
E THITE_43808 SNF21-like protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
D Others
C Other transcription-related factors
D Transcription elongation factors
E THITE_2113636 hypothetical protein K03145 TFIIS; transcription elongation factor S-II
E THITE_2108277 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E THITE_2145375 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E THITE_2106254 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E THITE_2124427 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E THITE_2121311 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E THITE_2123200 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E THITE_2057738 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E THITE_2113956 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E THITE_2119799 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E THITE_2121120 hypothetical protein K06100 SYMPK; symplekin
E THITE_2113524 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E THITE_58765 hypothetical protein K14845 RAI1; RAT1-interacting protein
E THITE_2108289 hypothetical protein K15559 RTT103; regulator of Ty1 transposition protein 103
E THITE_2124460 hypothetical protein K15560 NRD1; protein NRD1
E THITE_2111680 hypothetical protein K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E THITE_163057 hypothetical protein K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E THITE_2119942 hypothetical protein K15174 PAF1; RNA polymerase II-associated factor 1
E THITE_2115330 hypothetical protein K15175 CDC73; parafibromin
E THITE_2118878 hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9
E THITE_2121623 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1
E THITE_2110787 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
D Super elongation complex (SEC)
E THITE_2121434 hypothetical protein K15183 ELL; RNA polymerase II elongation factor ELL
D Little elongation complex (LEC)
E THITE_2121434 hypothetical protein K15183 ELL; RNA polymerase II elongation factor ELL
D Brd4/P-TEFb complex
D BUR kinase complex
E THITE_2107486 hypothetical protein K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
E THITE_2081909 hypothetical protein K15563 BUR2; protein BUR2
D CTDK-I complex
E THITE_2107586 hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E THITE_2043540 hypothetical protein K15564 CTK2; CTD kinase subunit beta
E THITE_2080526 hypothetical protein K15565 CTK3; CTD kinase subunit gamma
D 7SK RNP complex
D DBIRD complex
D Others
E THITE_2118518 hypothetical protein K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E THITE_2045304 hypothetical protein K21751 DR1; down-regulator of transcription 1
E THITE_2118919 hypothetical protein K21752 DRAP1; Dr1-associated corepressor
E THITE_2116513 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E THITE_2121050 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E THITE_2112678 hypothetical protein K17498 SPN1; transcription factor SPN1
E THITE_2117366 hypothetical protein K20826 RPAP1; RNA polymerase II-associated protein 1
E THITE_134942 hypothetical protein K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E THITE_2120070 hypothetical protein K06666 TUP1; general transcriptional corepressor TUP1
E THITE_2123973 hypothetical protein K06665 SSN6; general transcriptional corepressor CYC8
E THITE_2064683 hypothetical protein K12412 MCM1; pheromone receptor transcription factor
E THITE_2114946 hypothetical protein K24104 GPN; GPN-loop GTPase
E THITE_2114569 hypothetical protein K24104 GPN; GPN-loop GTPase
E THITE_2112271 hypothetical protein K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E THITE_2110899 hypothetical protein K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E THITE_2123824 hypothetical protein K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E THITE_2114056 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E THITE_2118800 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E THITE_2123067 hypothetical protein K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E THITE_2106710 hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E THITE_2122199 hypothetical protein K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E THITE_2116185 hypothetical protein K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E THITE_2112289 hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E THITE_2060065 hypothetical protein K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E THITE_2112787 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E THITE_2170468 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E THITE_2119818 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E THITE_2128764 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E THITE_2114571 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E THITE_2121415 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E THITE_2119820 hypothetical protein K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E THITE_2046631 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E THITE_2110255 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E THITE_2114603 hypothetical protein K15196 BRF1; transcription factor IIIB 90 kDa subunit
E THITE_2118641 hypothetical protein K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E THITE_71589 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E THITE_2108406 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
D TFIIIC, fungi type
E THITE_2108406 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E THITE_71589 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E THITE_2115956 hypothetical protein K15205 TFC6; transcription factor C subunit 6
E THITE_2119598 hypothetical protein K15206 TFC7; transcription factor C subunit 7
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
E THITE_2106227 hypothetical protein K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E THITE_2121926 hypothetical protein K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E THITE_2114056 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E THITE_2118800 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E THITE_2119848 hypothetical protein K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E THITE_2109250 hypothetical protein K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E THITE_2017867 hypothetical protein K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E THITE_2170468 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E THITE_2119818 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E THITE_2128764 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E THITE_2114571 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E THITE_2121415 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E THITE_2046631 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E THITE_2110255 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
E THITE_2147230 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E THITE_2016442 hypothetical protein K15217 RRN5; RNA polymerase I-specific transcription initiation factor RRN5
E THITE_2123642 hypothetical protein K15218 RRN6; RNA polymerase I-specific transcription initiation factor RRN6
E THITE_2115709 hypothetical protein K15219 RRN7; RNA polymerase I-specific transcription initiation factor RRN7
E THITE_151473 hypothetical protein K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11
E THITE_2117056 hypothetical protein K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E THITE_2108277 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E THITE_2145375 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E THITE_2110765 chromatin-remodeling complex ATPase-like protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
E THITE_2107586 hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E THITE_2043540 hypothetical protein K15564 CTK2; CTD kinase subunit beta
E THITE_2080526 hypothetical protein K15565 CTK3; CTD kinase subunit gamma
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E THITE_2170336 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E THITE_2106895 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024