+F Repair protein KO
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DNA Repair and Recombination Proteins - Triticum urartu (red wild einkorn wheat)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 125518963 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 125552504 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 125522519 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 125528846 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 125514766 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 125523042 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 125542659 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 125524680 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 125510158 DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 125550847 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 125543177 protein IWS1 homolog A K03504 POLD3; DNA polymerase delta subunit 3
F 125525288 uncharacterized protein LOC125525288 K03505 POLD4; DNA polymerase delta subunit 4
F 125510085 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
F 125534172 uncharacterized protein LOC125534172 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 125554015 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 125527414 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 125527246 histone H1.4-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 125553355 DNA polymerase epsilon subunit 3-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 125548520 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 125538975 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 125526792 flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 125553019 flap endonuclease 1-B-like K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 125508223 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 125522568 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 125536808 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 125552066 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125552070 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125544662 polynucleotide 3'-phosphatase ZDP-like isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 125544668 polynucleotide 3'-phosphatase ZDP-like isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 125518710 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 125529145 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 125544134 poly [ADP-ribose] polymerase 1-like isoform X1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 125516999 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 125522784 poly [ADP-ribose] polymerase 2-A-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 125522859 poly [ADP-ribose] polymerase 2-A-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 125524049 protein ADP-ribosyltransferase PARP3 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 125518997 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 125509302 probable ubiquitin receptor RAD23 isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 125516560 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 125519750 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 125514298 E3 ubiquitin-protein ligase RBX1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125542236 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125510864 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 125532193 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 125544047 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 125542498 DNA damage-binding protein 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 125522425 uncharacterized protein LOC125522425 K15082 RAD7; DNA repair protein RAD7
F 125537262 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 125511225 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 125528834 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 125540470 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 125524854 DNA-directed RNA polymerase II subunit RPB1-like isoform X1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 125510512 DNA-directed RNA polymerase II subunit RPB2 isoform X1 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 125517965 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 125520014 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 125508855 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 125512480 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125513270 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125530653 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125515683 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125515873 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125516073 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125528727 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125545086 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125551036 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125538793 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125508680 DNA-directed RNA polymerases IV and V subunit 5B-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125536299 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 125517198 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 125535690 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 125524627 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 125511585 DNA-directed RNA polymerases II, IV and V subunit 9B-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 125536303 DNA-directed RNA polymerases II, IV and V subunit 9A-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 125508143 DNA-directed RNA polymerases II, IV and V subunit 9B K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 125545140 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 125508404 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 125509783 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125509784 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125509791 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125531037 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125551904 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125515152 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 125538146 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 125538304 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 125514298 E3 ubiquitin-protein ligase RBX1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125542236 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125510864 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 125532193 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 125544047 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 125545340 WD repeat-containing protein ATCSA-1-like isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 125542734 DNA excision repair protein CSB isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 125545931 UV-stimulated scaffold protein A homolog isoform X1 K23720 UVSSA; UV-stimulated scaffold protein A
F 125545948 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 125530585 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 125532638 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 125518378 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 125524301 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 125544505 general transcription and DNA repair factor IIH helicase subunit XPB1-like isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 125548863 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 125545674 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 125517946 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 125538978 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 125512159 general transcription and DNA repair factor IIH subunit TFB4-like K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 125516075 general transcription and DNA repair factor IIH subunit TFB4-like isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 125540334 general transcription and DNA repair factor IIH subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 125540621 general transcription and DNA repair factor IIH subunit TFB5-like K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 125516626 cyclin-dependent kinase D-1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 125550545 cyclin-H1-1 K06634 CCNH; cyclin H
E 125537408 uncharacterized protein LOC125537408 K06634 CCNH; cyclin H
E 125523551 uncharacterized protein LOC125523551 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 125548103 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125543632 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125514886 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125552476 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 125506173 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125526597 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125513772 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 125550542 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125515619 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125543193 uncharacterized protein LOC125543193 isoform X1 K10739 RFA2; replication factor A2
E 125548270 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125541459 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125543582 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 125510000 DNA excision repair protein ERCC-1 isoform X1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 125511628 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 125552576 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 125508223 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 125525852 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 125528742 cullin-3A-like K03869 CUL3; cullin 3
E 125540124 cullin-3A-like K03869 CUL3; cullin 3
E 125531052 elongin-C-like K03872 ELOC; elongin-C
E 125551646 elongin-C-like K03872 ELOC; elongin-C
E 125544467 transcription elongation factor B polypeptide 3 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 125552003 DNA mismatch repair protein MSH2 isoform X1 K08735 MSH2; DNA mismatch repair protein MSH2
E 125537332 DNA mismatch repair protein MSH3-like K08736 MSH3; DNA mismatch repair protein MSH3
E 125538873 DNA mismatch repair protein MSH3-like isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 125509281 DNA mismatch repair protein MSH6-like K08737 MSH6; DNA mismatch repair protein MSH6
E 125509282 DNA mismatch repair protein MSH6-like K08737 MSH6; DNA mismatch repair protein MSH6
E 125542999 DNA mismatch repair protein MSH7 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 125546168 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 125521567 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 125513523 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 125510366 DNA mismatch repair protein MLH3-like K08739 MLH3; DNA mismatch repair protein MLH3
E 125510748 DNA mismatch repair protein MLH3-like K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 125550847 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 125543177 protein IWS1 homolog A K03504 POLD3; DNA polymerase delta subunit 3
E 125525288 uncharacterized protein LOC125525288 K03505 POLD4; DNA polymerase delta subunit 4
E 125510085 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E 125534172 uncharacterized protein LOC125534172 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 125548103 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125543632 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125514886 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125552476 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 125506173 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125526597 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125513772 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 125550542 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125515619 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125543193 uncharacterized protein LOC125543193 isoform X1 K10739 RFA2; replication factor A2
E 125548270 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125541459 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125543582 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 125524482 LOW QUALITY PROTEIN: replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 125539320 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E 125508525 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 125506574 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 125510903 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E 125510910 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E 125511144 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 125514761 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 125533962 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 125548520 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 125538975 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 125544941 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 125522409 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 125508223 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 125550189 DNA damage-binding protein cmr1-like isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 125531676 DNA damage-binding protein cmr1-like K24755 WDR76; WD repeat-containing protein 76
E 125539416 DNA damage-binding protein cmr1-like K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 125519051 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125540161 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125508059 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 125508842 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 125527934 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 125530898 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 125521885 uncharacterized protein LOC125521885 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 125524224 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 125524234 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 125530181 BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 125527101 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 125510367 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 125550853 DNA topoisomerase 2-binding protein 1-A K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 125535525 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 125539208 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 125519051 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125540161 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125508059 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 125508842 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 125542836 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 125547844 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 125547844 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 125545530 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 125536645 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 125520840 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 125545398 LOW QUALITY PROTEIN: DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 125513402 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 125548903 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 125509991 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E 125553205 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 125528145 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125514746 DNA repair and recombination protein RAD54 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125536382 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125554869 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125544179 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125544268 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 125551292 ATP-dependent DNA helicase Q-like 2 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 125551335 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 125551690 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 125550150 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 125514952 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125538310 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125538785 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 125514952 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125538310 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125509898 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125552735 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125553067 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125537719 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 125550271 uncharacterized protein LOC125550271 K15365 RMI2; RecQ-mediated genome instability protein 2
E 125550272 uncharacterized protein LOC125550272 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 125548103 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125543632 replication protein A 70 kDa DNA-binding subunit C-like K07466 RFA1; replication factor A1
E 125514886 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125552476 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 125506173 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125526597 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125513772 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 125550542 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 125515619 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 125543193 uncharacterized protein LOC125543193 isoform X1 K10739 RFA2; replication factor A2
E 125548270 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125541459 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
E 125543582 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 125508975 serine/threonine-protein phosphatase PP-X isozyme 2 isoform X1 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 125519660 serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 125519665 serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 125530365 serine/threonine-protein phosphatase 4 regulatory subunit 3B K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 125550883 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 125515647 uncharacterized protein LOC125515647 K19022 AP5B1; AP-5 complex subunit beta-1
E 125508276 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
D SMC5-SMC6 complex
E 125532274 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 125543047 structural maintenance of chromosomes protein 6B-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 125508651 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 125538963 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 125517638 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 125517963 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 125540083 crossover junction endonuclease EME1-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 125540084 crossover junction endonuclease EME1-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 125528140 crossover junction endonuclease MUS81-like isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125547007 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125547009 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125520863 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125543670 crossover junction endonuclease MUS81-like isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125529089 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 125530519 uncharacterized protein LOC125530519 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125514291 uncharacterized protein LOC125514291 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125551033 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125551040 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125521106 single-strand DNA endonuclease 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 125542985 uncharacterized protein LOC125542985 isoform X1 K19026 SPG11; spatacsin
E 125544087 uncharacterized protein LOC125544087 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 125535224 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 125526775 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125551408 uncharacterized protein LOC125551408 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125542215 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125542275 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125508577 ATPase family AAA domain-containing protein FIGL1 isoform X1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 125529606 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 125536398 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 125554882 uncharacterized protein LOC125554882 K27803 HROB; homologous recombination OB-fold protein
E 125521018 probable DNA helicase MCM8 isoform X1 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 125523460 probable DNA helicase MCM9 isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 125523511 probable DNA helicase MCM9 isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 125522192 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 125522003 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 125515859 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 125507852 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 125553252 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 125519051 double-strand break repair protein MRE11-like isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125540161 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 125508059 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 125509437 putative DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 125539555 putative DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 125528397 DNA repair protein XRCC4 isoform X1 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 125518710 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 125552066 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125552070 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125516126 uncharacterized protein LOC125516126 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 125516149 uncharacterized protein LOC125516149 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 125538085 tyrosyl-DNA phosphodiesterase 2-like K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 125540219 uncharacterized protein LOC125540219 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 125519756 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 125550758 DEAD-box ATP-dependent RNA helicase FANCM K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 125541631 protein MHF1 homolog K11511 APITD1; centromere protein S
E 125533645 protein MHF2 homolog K15360 STRA13; centromere protein X
E 125545955 uncharacterized protein LOC125545955 isoform X1 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 125514952 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125538310 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125509898 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125552735 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125553067 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125537719 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 125550271 uncharacterized protein LOC125550271 K15365 RMI2; RecQ-mediated genome instability protein 2
E 125550272 uncharacterized protein LOC125550272 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 125536035 uncharacterized protein LOC125536035 K10891 FANCD2; fanconi anemia group D2 protein
E 125536933 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 125551584 Fanconi anemia group I protein-like K10895 FANCI; fanconi anemia group I protein
E 125551716 Fanconi anemia group I protein-like K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 125542836 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 125510367 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 125523549 fanconi-associated nuclease 1 homolog K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 125547844 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 125536645 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 125512706 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
E 125508348 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 125527641 phytochrome-associated serine/threonine-protein phosphatase-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 125544502 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 125527920 phytochrome-associated serine/threonine-protein phosphatase-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 125544050 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 125550571 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 125532838 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 125550189 DNA damage-binding protein cmr1-like isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 125531676 DNA damage-binding protein cmr1-like K24755 WDR76; WD repeat-containing protein 76
E 125539416 DNA damage-binding protein cmr1-like K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 125544783 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 125536078 DNA repair protein REV1-like K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
D 125520251 DNA repair protein REV1-like K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 125531127 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 125528783 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125510899 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125537313 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125542947 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125514494 DNA repair protein RAD5A K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 125536020 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 125507874 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 125508985 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 125528820 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 125531141 ubiquitin-conjugating enzyme E2 36-like isoform X1 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 125548520 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 125538975 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 125551739 cell cycle checkpoint control protein RAD9B K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 125529905 uncharacterized protein LOC125529905 K10903 HUS1; HUS1 checkpoint protein
D 125531055 uncharacterized protein LOC125531055 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D 125520897 uncharacterized protein LOC125520897 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 125552305 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 125539320 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 125508525 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 125506574 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 125510903 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 125510910 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 125511144 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 125514761 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 125533962 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 125531055 uncharacterized protein LOC125531055 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D 125520897 uncharacterized protein LOC125520897 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 125529807 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 125529893 uncharacterized protein LOC125529893 isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 125554193 uncharacterized protein LOC125554193 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 125512706 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
D 125511311 uncharacterized protein LOC125511311 isoform X1 K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D 125542858 protein GET4 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 125520943 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 125529747 serine/threonine-protein kinase ATM-like K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 125529531 14-3-3-like protein GF14-B K06630 YWHAE; 14-3-3 protein epsilon
D 125532201 putative 14-3-3-like protein GF14-H isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 125550388 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 125554743 14-3-3-like protein GF14 omicron K06630 YWHAE; 14-3-3 protein epsilon
D 125520486 14-3-3-like protein GF14-A isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 125542505 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 125526795 14-3-3-like protein GF14-B K06630 YWHAE; 14-3-3 protein epsilon
D 125551407 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 125528555 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 125507881 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125545427 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125513332 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125513703 serine/threonine-protein kinase Nek3-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125551993 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125519830 serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125507332 uncharacterized protein LOC125507332 K22422 DONSON; protein downstream neighbor of Son
D 125544986 uncharacterized protein LOC125544986 K22422 DONSON; protein downstream neighbor of Son
D 125542493 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 125544542 replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 125528056 protein DECREASED SIZE EXCLUSION LIMIT 1-like K24770 DSE1; protein decreased size exclusion limit 1
D 125531581 protein DECREASED SIZE EXCLUSION LIMIT 1-like K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 125523335 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 125513033 myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 125535578 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 125509349 uncharacterized protein LOC125509349 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125545600 5' exonuclease Apollo-like K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125530753 5' exonuclease Apollo-like isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125515415 5' exonuclease Apollo-like isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125537963 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125522660 5' exonuclease Apollo-like K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125522692 5' exonuclease Apollo-like K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125548099 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 125536363 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 125512910 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125530632 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125534304 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125515256 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125515257 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125539998 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125540154 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125542446 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125542447 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 125536528 switch 2 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 125528067 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 125511396 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 125510088 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 125511010 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 125543633 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 125543981 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 125543540 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 125531240 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125548820 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125552981 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125554845 uncharacterized protein LOC125554845 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125555446 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125520406 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 125520349 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
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AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 125522519 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 125528846 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 125529521 alkylbase DNA glycosidase-like protein mag2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 125530611 alkylbase DNA glycosidase-like protein mag2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 125514766 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 125523042 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 125509446 uncharacterized protein LOC125509446 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125545043 uncharacterized protein LOC125545043 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125545217 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125538876 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125524367 uncharacterized protein LOC125524367 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125530990 formamidopyrimidine-DNA glycosylase-like K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 125535063 formamidopyrimidine-DNA glycosylase-like K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 125521947 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 125524680 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 125528128 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E 125545053 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 125518356 DNA polymerase I A, chloroplastic-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 125518356 DNA polymerase I A, chloroplastic-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 16792889 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 125506864 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 125526509 DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 125531062 DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 16792965 rpoC1; RNA polymerase beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 16792885 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 16792957 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 125544232 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
E 125544234 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 125545486 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 125510516 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 125545486 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 125510516 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 125518715 DNA repair protein RadA isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 125514321 ATP-dependent DNA helicase homolog RECG, chloroplastic K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 125511115 probable DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 125532379 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 125535631 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 125545486 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 125510516 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 125544232 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
D 125544234 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 125531240 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125548820 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125552981 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125554845 uncharacterized protein LOC125554845 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125555446 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024