+D Protein KO
#
Membrane Trafficking - Trametes versicolor
%
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AExocytosis
B Calcium ion-dependent exocytosis
C Synaptotagmins
C Septins
D TRAVEDRAFT_33124 cell division control/GTP binding protein K16944 SEPT7; septin 7
C DOC-2 proteins
C Acrosomal exocytosis proteins
D TRAVEDRAFT_112871 kinase-like protein K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
D TRAVEDRAFT_131355 kinase-like protein K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
C Phospholipases
D TRAVEDRAFT_136210 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 1 K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
D TRAVEDRAFT_36575 phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D TRAVEDRAFT_75277 phospholipase D/nuclease K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C Kinases and associated proteins
D TRAVEDRAFT_130304 SAICAR synthase-like protein K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D TRAVEDRAFT_74036 kinase-like protein K08796 BRSK; BR serine/threonine kinase [EC:2.7.11.1]
D TRAVEDRAFT_167674 Pkinase-domain-containing protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
D TRAVEDRAFT_112551 Pkinase-domain-containing protein K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D TRAVEDRAFT_144172 Pkinase-domain-containing protein K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D TRAVEDRAFT_158819 Pkinase-domain-containing protein K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D TRAVEDRAFT_28124 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TRAVEDRAFT_155455 Pkinase-domain-containing protein K19852 KIN1_2; serine/threonine protein kinase KIN1/2 [EC:2.7.11.1]
C Others
D TRAVEDRAFT_115374 EF-hand K19932 NCS1; neuronal calcium sensor
B Small GTPases and associated proteins
C Rab GTPases
D TRAVEDRAFT_33861 rab-type small GTP-binding protein K07901 RAB8A; Ras-related protein Rab-8A
C Rab associated proteins
D TRAVEDRAFT_66035 calmodulin K02183 CALM; calmodulin
D TRAVEDRAFT_30695 myosin regulatory light chain cdc4 K02183 CALM; calmodulin
D TRAVEDRAFT_30970 uncharacterized protein K19940 SEC2; Rab guanine nucleotide exchange factor SEC2
D TRAVEDRAFT_168108 Sec1-like protein K15292 STXBP1; syntaxin-binding protein 1
D TRAVEDRAFT_138398 uncharacterized protein K08518 STXBP5; syntaxin-binding protein 5
D TRAVEDRAFT_74629 DNase I-like protein K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D TRAVEDRAFT_28985 TBC-domain-containing protein K19951 TBC1D8_9; TBC1 domain family member 8/9
D TRAVEDRAFT_26644 TPR-like protein K13342 PEX5; peroxin-5
D TRAVEDRAFT_26782 TPR-like protein K13342 PEX5; peroxin-5
D TRAVEDRAFT_57336 FAD/NAD-P-binding domain-containing protein K23460 CHM; Rab proteins geranylgeranyltransferase component A
D TRAVEDRAFT_36183 rab-protein geranylgeranyltransferase K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D TRAVEDRAFT_28035 rab geranylgeranyltransferase K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
D TRAVEDRAFT_138552 WD repeat-containing protein K24155 DMXL; rabconnectin-3a
C Rho GTPases
D TRAVEDRAFT_117769 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
D TRAVEDRAFT_146571 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
C Other small GTPases and associated proteins
B Tethering complex
C Exocyst complex
D TRAVEDRAFT_158355 uncharacterized protein K19983 EXOC1; exocyst complex component 1
D TRAVEDRAFT_73389 uncharacterized protein K17637 EXOC2; exocyst complex component 2
D TRAVEDRAFT_44309 exocyst complex protein K19984 EXOC5; exocyst complex component 5
D TRAVEDRAFT_115883 rsec15 K19985 EXOC6; exocyst complex component 6
D TRAVEDRAFT_157114 uncharacterized protein K07195 EXOC7; exocyst complex component 7
D TRAVEDRAFT_157459 exocyst subunit EXO84 K19986 EXOC8; exocyst complex component 8
C Exocyst complex assembly proteins
D TRAVEDRAFT_72490 proteasome regulatory particle lid subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
D TRAVEDRAFT_37525 uncharacterized protein K17945 TPM1_2; tropomyosin, fungi type
B Others
C Exomer complex
D TRAVEDRAFT_153802 uncharacterized protein K19877 CHS5; chitin biosynthesis protein CHS5
D TRAVEDRAFT_171293 chaps-domain-containing protein K19881 BUD7; Chs5-Arf1p-binding protein BUD7/BCH1
C Others
D TRAVEDRAFT_120239 uncharacterized protein K12481 RBSN; rabenosyn-5
D TRAVEDRAFT_75531 scamp-domain-containing protein K19995 SCAMP; secretory carrier-associated membrane protein
D TRAVEDRAFT_148594 CRAL/TRIO domain-containing protein K19996 SFH5; phosphatidylinositol transfer protein SFH5
#
ASNARE
B Syntaxin (Qa)
C Stx-PM
D TRAVEDRAFT_45271 t-SNARE K08486 STX1B_2_3; syntaxin 1B/2/3
D TRAVEDRAFT_145085 t-SNARE K08486 STX1B_2_3; syntaxin 1B/2/3
C Stx-Endo
C Stx-TGN / EE
D TRAVEDRAFT_56258 t-SNARE K08489 STX16; syntaxin 16
C Stx-cisGolgi
D TRAVEDRAFT_25487 t-SNARE K08490 STX5; syntaxin 5
C Stx-sER
C Stx-rER
D TRAVEDRAFT_18037 uncharacterized protein K08492 STX18; syntaxin 18
B SNAP-25[N] (Qb)
C Vti1
D TRAVEDRAFT_128003 vesicle transport v-snare protein vti1 K08493 VTI1; vesicle transport through interaction with t-SNAREs 1
C NPSN
C Gos1 (Gos28)
D TRAVEDRAFT_138352 V-snare-domain-containing protein K08495 GOSR1; golgi SNAP receptor complex member 1
C Bos1 / Membrin
D TRAVEDRAFT_68910 golgi SNAP receptor complex member bos1 K08496 GOSR2; golgi SNAP receptor complex member 2
C Sec20
D TRAVEDRAFT_74116 Sec20-domain-containing protein K08497 SEC20; protein transport protein SEC20
B SNAP-25[C] (Qc)
C STX6
C STX8
D TRAVEDRAFT_171625 uncharacterized protein K08501 STX8; syntaxin 8
D TRAVEDRAFT_16714 syntaxin K08502 VAM7; regulator of vacuolar morphogenesis
C STX10
C Bet1
D TRAVEDRAFT_55704 uncharacterized protein K08504 BET1; blocked early in transport 1
C Sft1
C Syp7
C Use1
B SNAP-25 (Qb,c)
C SNAP-23
C SNAP-25
D TRAVEDRAFT_159275 uncharacterized protein K19950 SEC9; protein transport protein SEC9
C SNAP-29
C SNAP-47
B VAMP, Ykt6, Sec22 (R)
C VAMP
D TRAVEDRAFT_152249 synaptobrevin-like protein K08513 VAMP4; vesicle-associated membrane protein 4
D TRAVEDRAFT_73532 VAMP/synaptobrevin-like protein K08515 VAMP7; vesicle-associated membrane protein 7
C Ykt6
D TRAVEDRAFT_171987 snare protein YKT6 K08516 YKT6; synaptobrevin homolog YKT6
C Sec22
D TRAVEDRAFT_57065 protein transporter SEC22 K08517 SEC22; vesicle transport protein SEC22
C Tomosyn
D TRAVEDRAFT_138398 uncharacterized protein K08518 STXBP5; syntaxin-binding protein 5
C Putative SNAREs
B SNARE associated proteins
C Syntaxin-binding proteins
D TRAVEDRAFT_168108 Sec1-like protein K15292 STXBP1; syntaxin-binding protein 1
D TRAVEDRAFT_158232 Sec1-like protein K19998 SCFD1; sec1 family domain-containing protein 1
C Palmitoyltransferases
D TRAVEDRAFT_146991 zf-DHHC-domain-containing protein K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20 [EC:2.3.1.225]
C Others
D TRAVEDRAFT_115541 AAA-domain-containing protein K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6]
D TRAVEDRAFT_159041 vesicular-fusion protein SEC17 K15296 NAPA; alpha-soluble NSF attachment protein
D TRAVEDRAFT_138784 lipid binding protein K17919 SNX4; sorting nexin-4
D TRAVEDRAFT_168450 uncharacterized protein K21996 SNX41_42; sorting nexin-41/42
D TRAVEDRAFT_157296 GPP34-domain-containing protein K15620 GOLPH3; golgi phosphoprotein 3
D TRAVEDRAFT_71710 valosin-containing protein K13525 VCP; transitional endoplasmic reticulum ATPase
D TRAVEDRAFT_31967 SEP-domain-containing protein K14012 NSFL1C; UBX domain-containing protein 1
#
AEndocytosis
B Clathrin-mediated endocytosis
C Clathrin
D TRAVEDRAFT_168399 clathrin heavy chain K04646 CLTC; clathrin heavy chain
C Dynamin
D TRAVEDRAFT_71799 dynamin-related GTPase DNM1 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
C AP-2 complex
D TRAVEDRAFT_159181 Adaptor protein complex AP-2 alpha subunit K11824 AP2A; AP-2 complex subunit alpha
D TRAVEDRAFT_145845 Adaptor protein complex beta subunit K11825 AP2B1; AP-2 complex subunit beta-1
D TRAVEDRAFT_45456 clathrin adaptor mu subunit K11826 AP2M1; AP-2 complex subunit mu-1
D TRAVEDRAFT_61298 clathrin coat assembly protein ap17 K11827 AP2S1; AP-2 complex subunit sigma-1
C Other core components
D TRAVEDRAFT_155750 ENTH-domain-containing protein K12471 EPN; epsin
D TRAVEDRAFT_67768 ENTH-domain-containing protein K12471 EPN; epsin
D TRAVEDRAFT_146182 EF-hand K12472 EPS15; epidermal growth factor receptor substrate 15
D TRAVEDRAFT_146188 uncharacterized protein K12472 EPS15; epidermal growth factor receptor substrate 15
D TRAVEDRAFT_72034 ANTH-domain-containing protein K20044 PICALM; phosphatidylinositol-binding clathrin assembly protein
D TRAVEDRAFT_33852 BAR-domain-containing protein K12562 AMPH; amphiphysin
D TRAVEDRAFT_60269 PX-domain-containing protein K17923 SNX9_18_33; sorting nexin-9/18/33
D TRAVEDRAFT_27029 uncharacterized protein K20046 SLA1; actin cytoskeleton-regulatory complex protein SLA1
D TRAVEDRAFT_146732 uncharacterized protein K20047 PAN1; actin cytoskeleton-regulatory complex protein PAN1
D TRAVEDRAFT_27783 heat shock protein HSS1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TRAVEDRAFT_119097 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TRAVEDRAFT_140838 actin-like ATPase domain-containing protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Low-density lipoprotein receptor (LDLR) family proteins
C LDLR adaptor proteins
D TRAVEDRAFT_130304 SAICAR synthase-like protein K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
C GPCR adaptor proteins
D TRAVEDRAFT_60678 uncharacterized protein K20061 ALY1_2; arrestin-related trafficking adapter 3/6
D TRAVEDRAFT_161403 uncharacterized protein K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7
C Receptor tyrosine kinase (RTK) adaptor proteins
C Inositol 5-phosphatases
D TRAVEDRAFT_74629 DNase I-like protein K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D TRAVEDRAFT_56584 DNase I-like protein K20279 SYNJ; synaptojanin [EC:3.1.3.36]
C Kinases
D TRAVEDRAFT_41876 uncharacterized protein K08853 AAK; AP2-associated kinase [EC:2.7.11.1]
D TRAVEDRAFT_70727 kinase-like protein K17541 SCYL2; SCY1-like protein 2
C Ubiquitin E3 ligases
D TRAVEDRAFT_146382 HECT-domain-containing protein K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
C Others
D TRAVEDRAFT_55210 cytoskeleton assembly control protein K20040 HIP1R; huntingtin-interacting protein 1-related protein
D TRAVEDRAFT_110458 Calreticulin-domain-containing protein K08054 CANX; calnexin
D TRAVEDRAFT_145372 adaptin ear-binding coat-associated protein 1 NECAP-1 K20069 NECAP1_2; adaptin ear-binding coat-associated protein 1/2
D TRAVEDRAFT_61875 palmitoyltransferase PFA4 K20031 ZDHHC6; palmitoyltransferase ZDHHC6 [EC:2.3.1.225]
B Lipid raft mediated endocytosis
C Caveolin-mediated endocytosis
D TRAVEDRAFT_71799 dynamin-related GTPase DNM1 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D TRAVEDRAFT_147078 protein kinase C K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13]
C Flotillin-dependent endocytosis
C GRAF1-dependent endocytosis
D TRAVEDRAFT_117769 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
D TRAVEDRAFT_146571 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
D TRAVEDRAFT_116906 ARF/SAR K07937 ARF1_2; ADP-ribosylation factor 1/2
C Arf6-dependent endocytosis
D TRAVEDRAFT_160850 ARF/SAR K07941 ARF6; ADP-ribosylation factor 6
C RhoA-dependent endocytosis
D TRAVEDRAFT_82135 uncharacterized protein K04513 RHOA; Ras homolog gene family, member A
D TRAVEDRAFT_53697 small GTPase-binding protein K04513 RHOA; Ras homolog gene family, member A
D TRAVEDRAFT_53698 small GTPase-binding protein K04513 RHOA; Ras homolog gene family, member A
D TRAVEDRAFT_32537 small GTPase-binding protein K04513 RHOA; Ras homolog gene family, member A
D TRAVEDRAFT_71799 dynamin-related GTPase DNM1 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
B Phagocytosis
C Fc receptors
C Integrins (complement receptors)
C Opsonins
C Toll-like receptors
C C-lectin receptors
C Scavenger receptors
C Coronins
C Others
D TRAVEDRAFT_108538 myosin class I heavy chain K10356 MYO1; myosin I
B Macropinocytosis
C Ras GTPases
D TRAVEDRAFT_140206 ras protein K07827 KRAS; GTPase KRas
D TRAVEDRAFT_29729 ras protein K07827 KRAS; GTPase KRas
D TRAVEDRAFT_117769 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
D TRAVEDRAFT_146571 CC42_CANAL CELL division control protein 42 K04393 CDC42; cell division control protein 42
C Kinases
D TRAVEDRAFT_48802 atypical/PIKK/PI3K protein kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D TRAVEDRAFT_61043 uncharacterized protein K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D TRAVEDRAFT_55100 uncharacterized protein K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D TRAVEDRAFT_167674 Pkinase-domain-containing protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
C Phospholipase C
D TRAVEDRAFT_136210 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 1 K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
C Sorting nexins
D TRAVEDRAFT_149230 Vps5-domain-containing protein K17917 SNX1_2; sorting nexin-1/2
D TRAVEDRAFT_60269 PX-domain-containing protein K17923 SNX9_18_33; sorting nexin-9/18/33
C Others
B Bin/Amphiphysin/Rvs (BAR) family proteins
C N-BAR proteins
D TRAVEDRAFT_33852 BAR-domain-containing protein K12562 AMPH; amphiphysin
D TRAVEDRAFT_161675 BAR-domain-containing protein K20120 BIN3; bridging integrator 3
C F-BAR proteins
D TRAVEDRAFT_122627 uncharacterized protein K20121 FNBP1; formin-binding protein 1
D TRAVEDRAFT_148584 GTPase activating protein K20643 RGD1; Rho GTPase-activating protein RGD1
C I-BAR proteins
B Rab GTPases and associated proteins
C Rab GTPases
D TRAVEDRAFT_139953 GTP-binding protein ypt5 K07889 RAB5C; Ras-related protein Rab-5C
D TRAVEDRAFT_41455 GTP-binding protein RAB5 K07889 RAB5C; Ras-related protein Rab-5C
C Rab associated proteins
D TRAVEDRAFT_58773 guanine nucleotide exchange factor VPS9 K20131 RABGEF1; Rab5 GDP/GTP exchange factor
D TRAVEDRAFT_120239 uncharacterized protein K12481 RBSN; rabenosyn-5
D TRAVEDRAFT_74629 DNase I-like protein K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D TRAVEDRAFT_48802 atypical/PIKK/PI3K protein kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D TRAVEDRAFT_60924 ubiquitin-binding serine/threonine protein kinase VPS15 K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D TRAVEDRAFT_166729 vacuolar protein sorting-associated protein 45 K12479 VPS45; vacuolar protein sorting-associated protein 45
B Arf GTPases and associated proteins
C Arf GTPases
D TRAVEDRAFT_116906 ARF/SAR K07937 ARF1_2; ADP-ribosylation factor 1/2
D TRAVEDRAFT_160850 ARF/SAR K07941 ARF6; ADP-ribosylation factor 6
C Arf associated proteins
D TRAVEDRAFT_159995 ArfGap-domain-containing protein K12486 SMAP; stromal membrane-associated protein
B Others
C Fucosyltransferase
C EFR3-PI4KIII alpha complex and associated proteins
D TRAVEDRAFT_145526 atypical/PIKK/PI4K protein kinase K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67]
D TRAVEDRAFT_117575 uncharacterized protein K21842 EFR3; protein EFR3
C Insulin-like growth factor-binding proteins
C Others
#
AEndosome - Lysosome transport
B Rab GTPases and associated proteins
C Rab GTPases
D TRAVEDRAFT_139953 GTP-binding protein ypt5 K07889 RAB5C; Ras-related protein Rab-5C
D TRAVEDRAFT_41455 GTP-binding protein RAB5 K07889 RAB5C; Ras-related protein Rab-5C
D TRAVEDRAFT_159540 Rab family GTPase YPT7 K07897 RAB7A; Ras-related protein Rab-7A
D TRAVEDRAFT_160237 ras-domain-containing protein K07897 RAB7A; Ras-related protein Rab-7A
C Retromer subcomplex
D TRAVEDRAFT_160026 vacuolar protein sorting-associated protein 35 K18468 VPS35; vacuolar protein sorting-associated protein 35
D TRAVEDRAFT_171110 Metallo-dependent phosphatase K18467 VPS29; vacuolar protein sorting-associated protein 29
D TRAVEDRAFT_31604 vacuolar protein sorting-associated protein 26 K18466 VPS26A_B; vacuolar protein sorting-associated protein 26A/B
C FTS/Hook/FHIP (FHF) complex
D TRAVEDRAFT_36289 HOOK-domain-containing protein K16536 HOOK3; protein HOOK3
C Rab associated proteins
D TRAVEDRAFT_55066 uncharacterized protein K11982 RNF115_126; E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
D TRAVEDRAFT_48802 atypical/PIKK/PI3K protein kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D TRAVEDRAFT_27866 N-terminal nucleophile aminohydrolase K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1]
D TRAVEDRAFT_165846 uncharacterized protein K18469 TBC1D5; TBC1 domain family member 5
D TRAVEDRAFT_40846 RabGAP/TBC K20168 TBC1D15; TBC1 domain family member 15
D TRAVEDRAFT_57336 FAD/NAD-P-binding domain-containing protein K23460 CHM; Rab proteins geranylgeranyltransferase component A
D TRAVEDRAFT_36183 rab-protein geranylgeranyltransferase K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D TRAVEDRAFT_28035 rab geranylgeranyltransferase K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
D TRAVEDRAFT_169987 TBC-domain-containing protein K20176 SGSM3; small G protein signaling modulator 3
D TRAVEDRAFT_157296 GPP34-domain-containing protein K15620 GOLPH3; golgi phosphoprotein 3
B Arf GTPases and associated proteins
C Arf GTPases
D TRAVEDRAFT_166523 P-loop containing nucleoside triphosphate hydrolase protein K07955 ARL8; ADP-ribosylation factor-like protein 8
C BLOC-one-related complex (BORC)
C N-acetyl transferase complex C (NatC)
D TRAVEDRAFT_151271 acyl-CoA N-acyltransferase K00670 NAA30; N-alpha-acetyltransferase 30 [EC:2.3.1.256]
D TRAVEDRAFT_166112 Mak10-domain-containing protein K20823 NAA35; N-alpha-acetyltransferase 35, NatC auxiliary subunit
D TRAVEDRAFT_26096 uncharacterized protein K20824 NAA38; N-alpha-acetyltransferase 38, NatC auxiliary subunit
C Other Arf associated proteins
B Endosomal sorting complexes required for transport (ESCRT)
C ESCRT-0 complex
D TRAVEDRAFT_110325 ubiquitin binding protein K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate
D TRAVEDRAFT_58676 uncharacterized protein K04705 STAM; signal transducing adaptor molecule
C ESCRT-I complex
D TRAVEDRAFT_145866 UEV-domain-containing protein K12183 TSG101; ESCRT-I complex subunit TSG101
D TRAVEDRAFT_148055 vacuolar protein sorting-associated protein 28 K12184 VPS28; ESCRT-I complex subunit VPS28
D TRAVEDRAFT_167218 uncharacterized protein K12185 VPS37; ESCRT-I complex subunit VPS37
C ESCRT-II complex
D TRAVEDRAFT_30807 winged helix DNA-binding domain-containing protein K12188 SNF8; ESCRT-II complex subunit VPS22
D TRAVEDRAFT_28788 ESCRT-II complex vps25 subunit K12189 VPS25; ESCRT-II complex subunit VPS25
D TRAVEDRAFT_128544 ESCRT-II subunit protein VPS36 K12190 VPS36; ESCRT-II complex subunit VPS36
C ESCRT-III complex
D TRAVEDRAFT_163153 vacuolar assembly protein DID2 K12197 CHMP1; charged multivesicular body protein 1
D TRAVEDRAFT_144215 vacuolar sorting protein Vps24 K12193 VPS24; charged multivesicular body protein 3
D TRAVEDRAFT_44269 ESCRT-III subunit protein SNF7 K12194 CHMP4A_B; charged multivesicular body protein 4A/B
D TRAVEDRAFT_115570 HSPC177 K12198 CHMP5; charged multivesicular body protein 5
D TRAVEDRAFT_145680 uncharacterized protein K15053 CHMP7; charged multivesicular body protein 7
D TRAVEDRAFT_26086 AAA-domain-containing protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
C ESCRT associated proteins
D TRAVEDRAFT_158515 DUF605-domain-containing protein K12199 VTA1; vacuolar protein sorting-associated protein VTA1
D TRAVEDRAFT_59218 BRO1-domain-containing protein K12200 PDCD6IP; programmed cell death 6-interacting protein
B Tethering complex
C CORVET complex
D TRAVEDRAFT_153082 uncharacterized protein K20177 VPS3; vacuolar protein sorting-associated protein 3
D TRAVEDRAFT_131331 uncharacterized protein K20177 VPS3; vacuolar protein sorting-associated protein 3
D TRAVEDRAFT_113186 CORVET complex membrane-binding subunit VPS8 K20178 VPS8; vacuolar protein sorting-associated protein 8
D TRAVEDRAFT_24905 uncharacterized protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D TRAVEDRAFT_24919 uncharacterized protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D TRAVEDRAFT_153353 vacuolar protein sorting-associated protein 16 K20180 VPS16; vacuolar protein sorting-associated protein 16
D TRAVEDRAFT_158728 tethering complex subunit PEP3 K20181 VPS18; vacuolar protein sorting-associated protein 18
D TRAVEDRAFT_158094 Sec1-like protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
C Hops complex
D TRAVEDRAFT_24905 uncharacterized protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D TRAVEDRAFT_24919 uncharacterized protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D TRAVEDRAFT_153353 vacuolar protein sorting-associated protein 16 K20180 VPS16; vacuolar protein sorting-associated protein 16
D TRAVEDRAFT_158728 tethering complex subunit PEP3 K20181 VPS18; vacuolar protein sorting-associated protein 18
D TRAVEDRAFT_158094 Sec1-like protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
D TRAVEDRAFT_169036 uncharacterized protein K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
D TRAVEDRAFT_61483 vacuolar protein sorting-associated protein 41 K20184 VPS41; vacuolar protein sorting-associated protein 41
B Acidification regulators
C Rabconnectin-3 complex
D TRAVEDRAFT_138552 WD repeat-containing protein K24155 DMXL; rabconnectin-3a
D TRAVEDRAFT_75386 WD40 repeat-like protein K24738 WDR7; rabconnectin-3b
C RAVE complex
D TRAVEDRAFT_138552 WD repeat-containing protein K24155 DMXL; rabconnectin-3a
D TRAVEDRAFT_118908 S-phase kinase-associated protein 1A-like protein K03094 SKP1; S-phase kinase-associated protein 1
B Others
C AP-3 complex
D TRAVEDRAFT_41901 Ap3d1 protein K12396 AP3D; AP-3 complex subunit delta
D TRAVEDRAFT_169778 uncharacterized protein K12397 AP3B; AP-3 complex subunit beta
D TRAVEDRAFT_63581 clathrin adaptor mu subunit K12398 AP3M; AP-3 complex subunit mu
D TRAVEDRAFT_33320 Adaptor protein complex sigma subunit K12399 AP3S; AP-3 complex subunit sigma
C BLOC-1 complex
C BLOC-1 complex (yeast)
C BLOC-2 complex
C BLOC-3 complex
C Ferlins
C Others
D TRAVEDRAFT_123464 cysteine proteinase K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
D TRAVEDRAFT_133681 Mov34-domain-containing protein K11866 STAMBP; STAM-binding protein [EC:3.4.19.12]
D TRAVEDRAFT_165834 dynamin-like GTPase VPS1 K23481 VPS1; vacuolar protein sorting-associated protein 1
D TRAVEDRAFT_134767 uncharacterized protein K23481 VPS1; vacuolar protein sorting-associated protein 1
#
AProtein recycling
B Rab GTPases and associated proteins
C Rab GTPases
D TRAVEDRAFT_159077 ras-domain-containing protein K07880 RAB4B; Ras-related protein Rab-4B
D TRAVEDRAFT_36458 GTPase K07904 RAB11A; Ras-related protein Rab-11A
C Rab4 associated proteins
D TRAVEDRAFT_120239 uncharacterized protein K12481 RBSN; rabenosyn-5
D TRAVEDRAFT_138784 lipid binding protein K17919 SNX4; sorting nexin-4
D TRAVEDRAFT_163020 DLIC-domain-containing protein K10416 DYNC1LI; dynein cytoplasmic 1 light intermediate chain
C Rab11 associated proteins
D TRAVEDRAFT_40529 vesicle budding-like protein K14004 SEC13; protein transport protein SEC13
D TRAVEDRAFT_115883 rsec15 K19985 EXOC6; exocyst complex component 6
D TRAVEDRAFT_34148 RabGAP/TBC K20242 EVI5; ecotropic viral integration site 5 protein
D TRAVEDRAFT_157778 RabGAP/TBC K20167 TBC1D14; TBC1 domain family member 14
D TRAVEDRAFT_157296 GPP34-domain-containing protein K15620 GOLPH3; golgi phosphoprotein 3
C Other Rab GTPase associated proteins
D TRAVEDRAFT_74629 DNase I-like protein K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D TRAVEDRAFT_58773 guanine nucleotide exchange factor VPS9 K20131 RABGEF1; Rab5 GDP/GTP exchange factor
B Others
C Glutamate receptor-interacting proteins (GRIPs)
C GRIP associated proteins
C EARP complex
D TRAVEDRAFT_65273 uncharacterized protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D TRAVEDRAFT_118012 Vps52-domain-containing protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D TRAVEDRAFT_160554 uncharacterized protein K20299 VPS53; vacuolar protein sorting-associated protein 53
C WASH complex
D TRAVEDRAFT_121593 F-actin capping protein alpha subunit K10364 CAPZA; F-actin-capping protein subunit alpha
D TRAVEDRAFT_126825 F-actin capping protein beta subunit K10365 CAPZB; F-actin-capping protein subunit beta
C Retriever complex
D TRAVEDRAFT_171110 Metallo-dependent phosphatase K18467 VPS29; vacuolar protein sorting-associated protein 29
C Others
#
AEndosome - Golgi transport
B Rab GTPases and associated proteins
C Rab GTPases
D TRAVEDRAFT_57563 ras-domain-containing protein K07893 RAB6A; Ras-related protein Rab-6A
C Rab associated proteins
D TRAVEDRAFT_157296 GPP34-domain-containing protein K15620 GOLPH3; golgi phosphoprotein 3
D TRAVEDRAFT_62320 kinesin-domain-containing protein K10402 KIF20; kinesin family member 20
D TRAVEDRAFT_28985 TBC-domain-containing protein K19951 TBC1D8_9; TBC1 domain family member 8/9
D TRAVEDRAFT_151302 galactose oxidase K20285 RABEPK; Rab9 effector protein with kelch motifs
D TRAVEDRAFT_59789 uncharacterized protein K10419 DYNLRB; dynein light chain roadblock-type
D TRAVEDRAFT_67806 dynactin K04648 DCTN1; dynactin 1
D TRAVEDRAFT_74629 DNase I-like protein K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D TRAVEDRAFT_159169 vacuolar protein sorting-associated protein 13 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C
B Arf GTPases and associated proteins
C Arf GTPases
D TRAVEDRAFT_116906 ARF/SAR K07937 ARF1_2; ADP-ribosylation factor 1/2
D TRAVEDRAFT_163462 ARF/SAR K07942 ARL1; ADP-ribosylation factor-like protein 1
D TRAVEDRAFT_56040 P-loop containing nucleoside triphosphate hydrolase protein K07952 ARFRP1; ADP-ribosylation factor related protein 1
C Arf GTPase associated proteins
D TRAVEDRAFT_163103 ArfGap-domain-containing protein K12492 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1
D TRAVEDRAFT_156449 ArfGap-domain-containing protein K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3
D TRAVEDRAFT_159995 ArfGap-domain-containing protein K12486 SMAP; stromal membrane-associated protein
D TRAVEDRAFT_63207 Arf family guanine nucleotide exchange factor SEC7 K18442 ARFGEF; brefeldin A-inhibited guanine nucleotide-exchange protein
D TRAVEDRAFT_145396 Sec7-domain-containing protein K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
B Tethering complex
C Conserved oligomeric Golgi (COG) complex
D TRAVEDRAFT_68134 uncharacterized protein K20288 COG1; conserved oligomeric Golgi complex subunit 1
D TRAVEDRAFT_160610 COG complex component K20289 COG2; conserved oligomeric Golgi complex subunit 2
D TRAVEDRAFT_141228 Sec34-domain-containing protein K20290 COG3; conserved oligomeric Golgi complex subunit 3
D TRAVEDRAFT_165742 COG4-domain-containing protein K20291 COG4; conserved oligomeric Golgi complex subunit 4
D TRAVEDRAFT_43511 uncharacterized protein K20292 COG5; conserved oligomeric Golgi complex subunit 5
D TRAVEDRAFT_119794 oligomeric complex COG6 K20293 COG6; conserved oligomeric Golgi complex subunit 6
D TRAVEDRAFT_68194 uncharacterized protein K20293 COG6; conserved oligomeric Golgi complex subunit 6
D TRAVEDRAFT_30567 uncharacterized protein K20294 COG7; conserved oligomeric Golgi complex subunit 7
D TRAVEDRAFT_61684 Dor1-domain-containing protein K20295 COG8; conserved oligomeric Golgi complex subunit 8
C GARP complex
D TRAVEDRAFT_65273 uncharacterized protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D TRAVEDRAFT_118012 Vps52-domain-containing protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D TRAVEDRAFT_160554 uncharacterized protein K20299 VPS53; vacuolar protein sorting-associated protein 53
D TRAVEDRAFT_156908 Vps54-domain-containing protein K17600 VPS54; vacuolar protein sorting-associated protein 54
C TRAPP complex II
D TRAVEDRAFT_142285 snare-like protein K20300 TRAPPC1; trafficking protein particle complex subunit 1
D TRAVEDRAFT_162584 Sedlin K20301 TRAPPC2; trafficking protein particle complex subunit 2
D TRAVEDRAFT_144446 Sedlin K20301 TRAPPC2; trafficking protein particle complex subunit 2
D TRAVEDRAFT_165161 transport protein particle complex subunit K20302 TRAPPC3; trafficking protein particle complex subunit 3
D TRAVEDRAFT_35971 Sybindin-like protein K20303 TRAPPC4; trafficking protein particle complex subunit 4
D TRAVEDRAFT_26019 transporter particle subunit trs31 K20280 TRAPPC5; trafficking protein particle complex subunit 5
D TRAVEDRAFT_110181 transport protein particle component K20304 TRAPPC6; trafficking protein particle complex subunit 6
D TRAVEDRAFT_158546 uncharacterized protein K20305 TRAPPC8; trafficking protein particle complex subunit 8
D TRAVEDRAFT_119731 uncharacterized protein K20306 TRAPPC9; trafficking protein particle complex subunit 9
D TRAVEDRAFT_164477 uncharacterized protein K20307 TRAPPC10; trafficking protein particle complex subunit 10
D TRAVEDRAFT_132236 uncharacterized protein K20308 TRAPPC11; trafficking protein particle complex subunit 11
D TRAVEDRAFT_124146 uncharacterized protein K20309 TRAPPC12; trafficking protein particle complex subunit 12
D TRAVEDRAFT_36264 DUF974-domain-containing protein K20310 TRAPPC13; trafficking protein particle complex subunit 13
B Others
C AP-1 complex
D TRAVEDRAFT_168213 Adaptor protein complex AP-1 gamma subunit K12391 AP1G1; AP-1 complex subunit gamma-1
D TRAVEDRAFT_30209 Adaptor protein complex beta subunit K12392 AP1B1; AP-1 complex subunit beta-1
D TRAVEDRAFT_134202 clathrin adaptor mu subunit K12393 AP1M; AP-1 complex subunit mu
D TRAVEDRAFT_163660 Adaptor protein complex sigma subunit K12394 AP1S1_2; AP-1 complex subunit sigma 1/2
C AP-3 complex
D TRAVEDRAFT_41901 Ap3d1 protein K12396 AP3D; AP-3 complex subunit delta
D TRAVEDRAFT_169778 uncharacterized protein K12397 AP3B; AP-3 complex subunit beta
D TRAVEDRAFT_63581 clathrin adaptor mu subunit K12398 AP3M; AP-3 complex subunit mu
D TRAVEDRAFT_33320 Adaptor protein complex sigma subunit K12399 AP3S; AP-3 complex subunit sigma
C AP-4 complex
C GGA
D TRAVEDRAFT_152121 VHS-domain-containing protein K12404 GGA; ADP-ribosylation factor-binding protein GGA
C Aftiphilin/p200/gamma-synergin complex
D TRAVEDRAFT_151204 ARM repeat-containing protein K24814 HEATR5; HEAT repeat-containing protein 5
C Others
D TRAVEDRAFT_36575 phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D TRAVEDRAFT_75277 phospholipase D/nuclease K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D TRAVEDRAFT_145526 atypical/PIKK/PI4K protein kinase K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67]
D TRAVEDRAFT_130304 SAICAR synthase-like protein K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D TRAVEDRAFT_61043 uncharacterized protein K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D TRAVEDRAFT_55100 uncharacterized protein K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D TRAVEDRAFT_121613 uncharacterized protein K20316 SCOC; short coiled-coil protein
D TRAVEDRAFT_122124 uncharacterized protein K20318 SYS1; protein SYS1
D TRAVEDRAFT_160275 UPF0016-domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TRAVEDRAFT_168740 uncharacterized protein K23544 SERINC1; serine incorporator 1
D TRAVEDRAFT_69583 PX-domain-containing protein K17918 SNX3_12; sorting nexin-3/12
D TRAVEDRAFT_168545 uncharacterized protein K17922 SNX8; sorting nexin-8
D TRAVEDRAFT_135274 uncharacterized protein K26678 MON2; protein MON2
D TRAVEDRAFT_32869 uncharacterized protein K26680 DOP1; protein dopey
D TRAVEDRAFT_62208 DUF846-domain-containing protein K26752 TVP23; golgi apparatus membrane protein TVP23
D TRAVEDRAFT_150737 uncharacterized protein K26753 TVP38; golgi apparatus membrane protein TVP38
D TRAVEDRAFT_115459 Golgi apparatus membrane protein TVP38 K26753 TVP38; golgi apparatus membrane protein TVP38
D TRAVEDRAFT_165834 dynamin-like GTPase VPS1 K23481 VPS1; vacuolar protein sorting-associated protein 1
D TRAVEDRAFT_134767 uncharacterized protein K23481 VPS1; vacuolar protein sorting-associated protein 1
#
AEndoplasmic reticulum (ER) - Golgi transport
B Forward pathways
C Coat protein complex II (COP-II)
D TRAVEDRAFT_145251 ARF/SAR K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-]
D TRAVEDRAFT_40529 vesicle budding-like protein K14004 SEC13; protein transport protein SEC13
D TRAVEDRAFT_176166 uncharacterized protein K14005 SEC31; protein transport protein SEC31
D TRAVEDRAFT_153111 copii coat protein K14006 SEC23; protein transport protein SEC23
D TRAVEDRAFT_153406 protein transporter SEC24 K14007 SEC24; protein transport protein SEC24
D TRAVEDRAFT_22995 sec24-like protein K14007 SEC24; protein transport protein SEC24
D TRAVEDRAFT_143853 WD40 repeat-like protein K14003 PREB; prolactin regulatory element-binding protein
D TRAVEDRAFT_45241 uncharacterized protein K20353 SEC16; COPII coat assembly protein SEC16
C TRAPP complex I
D TRAVEDRAFT_142285 snare-like protein K20300 TRAPPC1; trafficking protein particle complex subunit 1
D TRAVEDRAFT_162584 Sedlin K20301 TRAPPC2; trafficking protein particle complex subunit 2
D TRAVEDRAFT_144446 Sedlin K20301 TRAPPC2; trafficking protein particle complex subunit 2
D TRAVEDRAFT_165161 transport protein particle complex subunit K20302 TRAPPC3; trafficking protein particle complex subunit 3
D TRAVEDRAFT_35971 Sybindin-like protein K20303 TRAPPC4; trafficking protein particle complex subunit 4
D TRAVEDRAFT_26019 transporter particle subunit trs31 K20280 TRAPPC5; trafficking protein particle complex subunit 5
D TRAVEDRAFT_110181 transport protein particle component K20304 TRAPPC6; trafficking protein particle complex subunit 6
C p24 family proteins
D TRAVEDRAFT_72170 uncharacterized protein K20346 TMED4_9_11; p24 family protein alpha
D TRAVEDRAFT_27352 supernatant protein factor C-terminal domain-containing protein K20347 TMED2; p24 family protein beta-1
D TRAVEDRAFT_172544 uncharacterized protein K20352 TMED10; p24 family protein delta-1
C PDI family proteins
D TRAVEDRAFT_144227 protein disulfide isomerase K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
D TRAVEDRAFT_58442 uncharacterized protein K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1]
D TRAVEDRAFT_152993 protein disulfide isomerase K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1]
D TRAVEDRAFT_35642 thioredoxin-domain-containing protein K13984 TXNDC5; thioredoxin domain-containing protein 5 [EC:5.3.4.1]
C Rab GTPases
D TRAVEDRAFT_119241 GTP-binding protein ypt1 K07874 RAB1A; Ras-related protein Rab-1A
D TRAVEDRAFT_119425 GTP-binding protein ypt1 K07874 RAB1A; Ras-related protein Rab-1A
D TRAVEDRAFT_165202 ras-domain-containing protein K07877 RAB2A; Ras-related protein Rab-2A
C Rab associated proteins
D TRAVEDRAFT_26645 prenylated rab acceptor PRA1 K20359 RABAC1; PRA1 family protein 1
D TRAVEDRAFT_130444 GTPase-activating protein GYP8 K20372 TBC1D20; TBC1 domain family member 20
D TRAVEDRAFT_142568 RabGAP/TBC K20360 TBC1D22; TBC1 domain family member 2
D TRAVEDRAFT_172023 YIF1-domain-containing protein K20362 YIF1; protein transport protein YIF1
D TRAVEDRAFT_173529 uncharacterized protein K20361 USO1; intracellular protein transport protein USO1
C ER-Golgi intermediate compartment (ERGIC) proteins
D TRAVEDRAFT_173564 legume-like lectin K10082 LMAN2; lectin, mannose-binding 2
D TRAVEDRAFT_54985 glycoside hydrolase K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209]
D TRAVEDRAFT_123722 seven-hairpin glycosidase K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209]
D TRAVEDRAFT_29867 DUF1692-domain-containing protein K20366 ERGIC2; endoplasmic reticulum-Golgi intermediate compartment protein 2
D TRAVEDRAFT_147339 endoplasmic reticulum-derived transport vesicle ERV46 K20367 ERGIC3; endoplasmic reticulum-Golgi intermediate compartment protein 3
D TRAVEDRAFT_154426 cornichon K20368 CNIH; protein cornichon
D TRAVEDRAFT_59839 SURF4-domain-containing protein K20369 ERV29; ER-derived vesicles protein
D TRAVEDRAFT_170635 heat shock protein 70 K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]
D TRAVEDRAFT_61815 uncharacterized protein K20371 NUCB; nucleobindin
B Retrieval pathways
C Coat protein complex I (COP-I)
D TRAVEDRAFT_172870 coatomer subunit alpha-2 K05236 COPA; coatomer subunit alpha
D TRAVEDRAFT_31022 coatomer subunit alpha-2 K05236 COPA; coatomer subunit alpha
D TRAVEDRAFT_138513 coatomer protein K17301 COPB1; coatomer subunit beta
D TRAVEDRAFT_44357 coatomer beta' subunit K17302 COPB2; coatomer subunit beta'
D TRAVEDRAFT_55151 coatomer subunit gamma K17267 COPG; coatomer subunit gamma
D TRAVEDRAFT_158750 coatomer subunit delta K20471 COPD; coatomer subunit delta
D TRAVEDRAFT_28929 coatomer complex protein K17268 COPE; coatomer subunit epsilon
D TRAVEDRAFT_154229 coatomer protein K20472 COPZ; coatomer subunit zeta
C NRZ (DSL1) complex
D TRAVEDRAFT_54997 Sec39-domain-containing protein K20473 NBAS; neuroblastoma-amplified sequence
D TRAVEDRAFT_33285 uncharacterized protein K20474 RINT1; RAD50-interacting protein 1
D TRAVEDRAFT_148707 uncharacterized protein K11578 ZW10; protein transport protein DSL1/ZW10
C Golgi to ER traffic proteins (GET)
D TRAVEDRAFT_141987 uncharacterized protein K22384 GET1; tail-anchored protein insertion receptor
D TRAVEDRAFT_26057 uncharacterized protein K22386 GET2; GET complex subunit GET2
D TRAVEDRAFT_33838 anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D TRAVEDRAFT_29572 uncharacterized protein K23387 GET4; golgi to ER traffic protein 4
D TRAVEDRAFT_130603 ubiquitin-domain-containing protein K23388 UBL4; ubiquitin-like protein 4
C Rab GTPases
D TRAVEDRAFT_57563 ras-domain-containing protein K07893 RAB6A; Ras-related protein Rab-6A
C Rab associated proteins
D TRAVEDRAFT_139514 RIC1-domain-containing protein K20476 RIC1; RAB6A-GEF complex partner protein 1
D TRAVEDRAFT_42475 Rgp1-domain-containing protein K20477 RGP1; RAB6A-GEF complex partner protein 2
D TRAVEDRAFT_154239 ER lumen protein retaining receptor K10949 KDELR; ER lumen protein retaining receptor
D TRAVEDRAFT_120239 uncharacterized protein K12481 RBSN; rabenosyn-5
D TRAVEDRAFT_142568 RabGAP/TBC K20360 TBC1D22; TBC1 domain family member 2
B Others
C Oxysterol-binding proteins
D TRAVEDRAFT_111458 uncharacterized protein K20456 OSBP; oxysterol-binding protein 1
D TRAVEDRAFT_25882 oxysterol-binding protein related protein OSH3 K20463 OSBPL3_6_7; oxysterol-binding protein-related protein 3/6/7
D TRAVEDRAFT_109425 Oxysterol-binding protein K22285 OSBPL8; oxysterol-binding protein-related protein 8
D TRAVEDRAFT_151915 uncharacterized protein K20465 OSBPL9_10_11; oxysterol-binding protein-related protein 9/10/11
D TRAVEDRAFT_59645 Oxysterol-binding protein K20465 OSBPL9_10_11; oxysterol-binding protein-related protein 9/10/11
C FXYD proteins
C YIPF proteins
D TRAVEDRAFT_117507 Yip1-domain-containing protein K22940 YIPF1_2; protein YIPF1/2
D TRAVEDRAFT_141435 Yip1-domain-containing protein K20363 YIPF5_7; protein YIPF5/7
D TRAVEDRAFT_126600 Yip1-domain-containing protein K22943 YIPF6; protein YIPF6
C ER membrane protein complex
D TRAVEDRAFT_126934 DUF1620-domain-containing protein K23562 EMC1; ER membrane protein complex subunit 1
D TRAVEDRAFT_60884 TPR-like protein K23563 EMC2; ER membrane protein complex subunit 2
D TRAVEDRAFT_18020 uncharacterized protein K23564 EMC3; ER membrane protein complex subunit 3
D TRAVEDRAFT_36456 DUF1077-domain-containing protein K23565 EMC4; ER membrane protein complex subunit 4
D TRAVEDRAFT_47436 uncharacterized protein K23566 MMGT1; membrane magnesium transporter 1
D TRAVEDRAFT_33498 uncharacterized protein K23568 EMC7; ER membrane protein complex subunit 7
D TRAVEDRAFT_57074 uncharacterized protein K23570 EMC10; ER membrane protein complex subunit 10
C SEC61 complex
D TRAVEDRAFT_175632 SecY protein K10956 SEC61A; protein transport protein SEC61 subunit alpha
D TRAVEDRAFT_30464 Pre protein translocase Sec Sec61-beta subunit K09481 SEC61B; protein transport protein SEC61 subunit beta
C TRAP complex
C Multi-pass translocon (MPT) complex
D TRAVEDRAFT_44770 DUF1682-domain-containing protein K24962 CCDC47; PAT complex subunit CCDC47
C Post-GPI attachment to proteins factors (PGAP)
D TRAVEDRAFT_44379 GPI-inositol-deacylase K05294 PGAP1; GPI inositol-deacylase [EC:3.-.-.-]
D TRAVEDRAFT_19455 Per1-like protein K23553 PGAP3; post-GPI attachment to proteins factor 3
D TRAVEDRAFT_69187 uncharacterized protein K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-]
D TRAVEDRAFT_114625 uncharacterized protein K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-]
C Others
D TRAVEDRAFT_158232 Sec1-like protein K19998 SCFD1; sec1 family domain-containing protein 1
D TRAVEDRAFT_159649 nucleoporin POM33 K20724 TMEM33; transmembrane protein 33
D TRAVEDRAFT_109071 uncharacterized protein K23554 GRAMD4; GRAM domain-containing protein 4
D TRAVEDRAFT_122609 VAMP-associated protein K06096 VAPA; vesicle-associated membrane protein-associated protein A
D TRAVEDRAFT_126449 Arv1-domain-containing protein K21848 ARV1; lipid intermediate transporter
D TRAVEDRAFT_152425 beta-glucan synthesis-associated K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_137261 glycoside hydrolase family 16 protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_143729 glycoside hydrolase family 16 protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_39385 glycoside hydrolase family 16 protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_139375 glycoside hydrolase family 16 protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_139596 glycoside hydrolase family 16 protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_68291 uncharacterized protein K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D TRAVEDRAFT_157296 GPP34-domain-containing protein K15620 GOLPH3; golgi phosphoprotein 3
D TRAVEDRAFT_60246 uncharacterized protein K23292 LNPK; endoplasmic reticulum junction formation protein lunapark
D TRAVEDRAFT_141459 Got1-domain-containing protein K26683 GOLT1; vesicle transport protein GOT1
D TRAVEDRAFT_141956 root hair defective 3 GTP-binding protein K22698 SEY1; protein SEY1 [EC:3.6.5.-]
#
AAutophagy
B Autophagosome formation proteins
C ULK complex
D TRAVEDRAFT_25211 DUF1649-domain-containing protein K19730 ATG101; autophagy-related protein 101
C Atg1 complex
D TRAVEDRAFT_40115 Pkinase-domain-containing protein K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
D TRAVEDRAFT_169021 uncharacterized protein K08329 ATG17; autophagy-related protein 17
C PI3K complex
D TRAVEDRAFT_48802 atypical/PIKK/PI3K protein kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D TRAVEDRAFT_60924 ubiquitin-binding serine/threonine protein kinase VPS15 K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D TRAVEDRAFT_69100 APG6-domain-containing protein K08334 BECN; beclin
C ATG9 transmembrane protein
D TRAVEDRAFT_27887 APG9-domain-containing protein K17907 ATG9; autophagy-related protein 9
C Atg18-Atg2 complex
D TRAVEDRAFT_40964 WD40 repeat-like protein K17908 WIPI1_2; autophagy-related protein 18
D TRAVEDRAFT_63914 uncharacterized protein K17906 ATG2; autophagy-related protein 2
C Atg12 conjugation proteins
D TRAVEDRAFT_30501 APG12-domain-containing protein K08336 ATG12; ubiquitin-like protein ATG12
D TRAVEDRAFT_24665 E1-like protein-activating K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D TRAVEDRAFT_163229 uncharacterized protein K17888 ATG10L; ubiquitin-like-conjugating enzyme ATG10
D TRAVEDRAFT_26718 uncharacterized protein K08339 ATG5; autophagy-related protein 5
C Atg8 conjugation proteins
D TRAVEDRAFT_146085 symbiosis-like protein K08341 GABARAP; GABA(A) receptor-associated protein
D TRAVEDRAFT_33890 cysteine protease ATG4 K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-]
D TRAVEDRAFT_24665 E1-like protein-activating K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D TRAVEDRAFT_26292 uncharacterized protein K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
B Cytoplasm to vacuolar targeting (CVT) pathway
C Selective cargos
D TRAVEDRAFT_30268 glycoside hydrolase family 38 protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D TRAVEDRAFT_26923 aspartyl aminopeptidase K01267 DNPEP; aspartyl aminopeptidase [EC:3.4.11.21]
C Cargo receptors
C Scaffold protein
D TRAVEDRAFT_172756 uncharacterized protein K08330 ATG11; autophagy-related protein 11
C Other Cvt associated proteins
D TRAVEDRAFT_168450 uncharacterized protein K21996 SNX41_42; sorting nexin-41/42
D TRAVEDRAFT_138784 lipid binding protein K17919 SNX4; sorting nexin-4
D TRAVEDRAFT_70614 alpha/beta-hydrolase K17900 ATG15; lipase ATG15 [EC:3.1.1.3]
D TRAVEDRAFT_29676 alpha/beta-hydrolase K17900 ATG15; lipase ATG15 [EC:3.1.1.3]
D TRAVEDRAFT_146754 alpha/beta-hydrolase K17900 ATG15; lipase ATG15 [EC:3.1.1.3]
D TRAVEDRAFT_26827 uncharacterized protein K21141 ATG27; autophagy-related protein 27
D TRAVEDRAFT_140401 vacuolar protein 8 K08332 VAC8; vacuolar protein 8
B Mitophagy
C Cargo receptors
C Scaffold proteins
D TRAVEDRAFT_172756 uncharacterized protein K08330 ATG11; autophagy-related protein 11
C PINK1-Parkin associated proteins
D TRAVEDRAFT_75357 mitofusin K06030 MFN2; mitofusin 2 [EC:3.6.5.-]
D TRAVEDRAFT_61794 uncharacterized protein K17987 NBR1; next to BRCA1 gene 1 protein
C Other mitophagy associated proteins
D TRAVEDRAFT_116044 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D TRAVEDRAFT_156755 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D TRAVEDRAFT_49650 uncharacterized protein K22255 ATPIF1; ATPase inhibitor, mitochondrial
D TRAVEDRAFT_44476 Tom7-domain-containing protein K17771 TOM7; mitochondrial import receptor subunit TOM7
B Pexophagy
C Selective cargos
D TRAVEDRAFT_175684 uncharacterized protein K13336 PEX3; peroxin-3
D TRAVEDRAFT_55339 uncharacterized protein K13343 PEX14; peroxin-14
C Cargo receptors
C Other pexophagy associated proteins
D TRAVEDRAFT_61794 uncharacterized protein K17987 NBR1; next to BRCA1 gene 1 protein
D TRAVEDRAFT_61131 AAA-domain-containing protein K13338 PEX1; peroxin-1
D TRAVEDRAFT_165737 AAA-domain-containing protein K13339 PEX6; peroxin-6
B Aggrephagy
C Cargo receptors
D TRAVEDRAFT_61794 uncharacterized protein K17987 NBR1; next to BRCA1 gene 1 protein
C Scaffold proteins
C Other aggrephagy associated proteins
D TRAVEDRAFT_71710 valosin-containing protein K13525 VCP; transitional endoplasmic reticulum ATPase
B Xenophagy
C Cargo receptors
D TRAVEDRAFT_61794 uncharacterized protein K17987 NBR1; next to BRCA1 gene 1 protein
C Other xenophagy associated proteins
B Chaperone mediated autophagy (CMA)
C Selective cargos
D TRAVEDRAFT_145091 aspartate aminotransferase K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1]
D TRAVEDRAFT_30062 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TRAVEDRAFT_110904 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TRAVEDRAFT_67745 uncharacterized protein K04523 UBQLN; ubiquilin
C Cargo receptors
C Chaperones
D TRAVEDRAFT_27783 heat shock protein HSS1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TRAVEDRAFT_119097 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TRAVEDRAFT_140838 actin-like ATPase domain-containing protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TRAVEDRAFT_136662 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C Co-chaperones
C Other CMA associated proteins
D TRAVEDRAFT_110730 translation elongation factor K03231 EEF1A; elongation factor 1-alpha
D TRAVEDRAFT_60064 carboxypeptidase C K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
D TRAVEDRAFT_66190 serine carboxypeptidase K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
B Other autophagy associated proteins
C RNautophagy/DNautophagy
C Micronucleophagy
D TRAVEDRAFT_140401 vacuolar protein 8 K08332 VAC8; vacuolar protein 8
C Midbophagy
D TRAVEDRAFT_61794 uncharacterized protein K17987 NBR1; next to BRCA1 gene 1 protein
C Glycophagy
C TRIM-directed selective autophagy
C ER-mitochondria tethering complex
D TRAVEDRAFT_75357 mitofusin K06030 MFN2; mitofusin 2 [EC:3.6.5.-]
C mTORC1 complex
D TRAVEDRAFT_167610 FAT-domain-containing protein K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D TRAVEDRAFT_61398 atypical/PIKK/FRAP protein kinase K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D TRAVEDRAFT_45316 WD40 repeat-like protein K08266 MLST8; target of rapamycin complex subunit LST8
D TRAVEDRAFT_54965 ubiquitin-binding TORC1 subunit KOG1 K07204 RAPTOR; regulatory associated protein of mTOR
C mTORC2 complex
D TRAVEDRAFT_167610 FAT-domain-containing protein K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D TRAVEDRAFT_61398 atypical/PIKK/FRAP protein kinase K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D TRAVEDRAFT_45316 WD40 repeat-like protein K08266 MLST8; target of rapamycin complex subunit LST8
D TRAVEDRAFT_30586 SIN1-domain-containing protein K20410 MAPKAP1; target of rapamycin complex 2 subunit MAPKAP1/AVO1
D TRAVEDRAFT_20006 TORC2 complex subunit TSC11 K08267 RICTOR; rapamycin-insensitive companion of mTOR
C SEACIT/GATOR1 complex
D TRAVEDRAFT_61484 GTPase-activating protein IML1 K20404 DEPDC5; SEA/GATOR complex protein SEA1/DEPDC5
D TRAVEDRAFT_59017 uncharacterized protein K20406 NPRL3; nitrogen permease regulator 3
C SEACAT/GATOR2 complex
D TRAVEDRAFT_65085 uncharacterized protein K20408 WDR24; SEA/GATOR complex protein SEA2/WDR24
D TRAVEDRAFT_50605 uncharacterized protein K20409 WDR59; SEA/GATOR complex protein SEA3/WDR59
D TRAVEDRAFT_43879 uncharacterized protein K20407 MIOS; SEA/GATOR complex protein SEA4/MIOS
D TRAVEDRAFT_32061 WD40 repeat-like protein K14299 SEH1; nucleoporin SEH1
D TRAVEDRAFT_40529 vesicle budding-like protein K14004 SEC13; protein transport protein SEC13
C KICSTOR complex
C Rab GTPases
D TRAVEDRAFT_119241 GTP-binding protein ypt1 K07874 RAB1A; Ras-related protein Rab-1A
D TRAVEDRAFT_119425 GTP-binding protein ypt1 K07874 RAB1A; Ras-related protein Rab-1A
D TRAVEDRAFT_33861 rab-type small GTP-binding protein K07901 RAB8A; Ras-related protein Rab-8A
C Rab associated proteins
C Others
D TRAVEDRAFT_168876 serine threonine protein phosphatase 2A K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
D TRAVEDRAFT_57564 serine/threonine protein phosphatase PP2A-associated protein K17606 IGBP1; immunoglobulin-binding protein 1
D TRAVEDRAFT_68688 uncharacterized protein K21249 UVRAG; UV radiation resistance-associated gene protein
D TRAVEDRAFT_61067 autophagy-type protein 22 K06902 UMF1; MFS transporter, UMF1 family
D TRAVEDRAFT_125459 uncharacterized protein K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter)
D TRAVEDRAFT_142829 uncharacterized protein K22991 WDR45; WD repeat-containing protein 45
D TRAVEDRAFT_26918 uncharacterized protein K23952 VMA21; vacuolar ATPase assembly integral membrane protein VMA21
D TRAVEDRAFT_57141 UPF0183-domain-containing protein K27411 PHAF1; phagosome assembly factor 1
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AOthers
B NADPH oxidases (Nox) and associated proteins
C NADPH oxidases
D TRAVEDRAFT_68345 NADPH oxidase isoform 1 K08008 NOX1; NADPH oxidase 1
D TRAVEDRAFT_154726 NADPH oxidase isoform 2 K21421 NOX2; NADPH oxidase 2 [EC:1.-.-.-]
C Nox associated proteins
B Actin-binding proteins
C Myosins
D TRAVEDRAFT_108538 myosin class I heavy chain K10356 MYO1; myosin I
D TRAVEDRAFT_71028 uncharacterized protein K10357 MYO5; myosin V
C Arp2/3 complex
D TRAVEDRAFT_27913 actin-like protein ARPC3 K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B
D TRAVEDRAFT_169800 actin-like protein ARPC2 K05758 ARPC2; actin related protein 2/3 complex, subunit 2
D TRAVEDRAFT_35159 actin-like protein ARPC3 K05756 ARPC3; actin related protein 2/3 complex, subunit 3
D TRAVEDRAFT_34212 actin-like protein ARPC3 K05755 ARPC4; actin related protein 2/3 complex, subunit 4
D TRAVEDRAFT_151515 arp2/3 complex subunit K05754 ARPC5; actin related protein 2/3 complex, subunit 5
D TRAVEDRAFT_167567 actin binding protein K17260 ACTR2; actin-related protein 2
D TRAVEDRAFT_169020 actin-like protein Arp3 K18584 ACTR3; actin-related protein 3
C Nucleation-promoting factors (NPFs)
D TRAVEDRAFT_134119 uncharacterized protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
D TRAVEDRAFT_84358 WH1-domain-containing protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
D TRAVEDRAFT_44622 uncharacterized protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
D TRAVEDRAFT_47250 uncharacterized protein K20520 DBNL; drebrin-like protein
D TRAVEDRAFT_146732 uncharacterized protein K20047 PAN1; actin cytoskeleton-regulatory complex protein PAN1
D TRAVEDRAFT_33852 BAR-domain-containing protein K12562 AMPH; amphiphysin
D TRAVEDRAFT_27029 uncharacterized protein K20046 SLA1; actin cytoskeleton-regulatory complex protein SLA1
D TRAVEDRAFT_71403 uncharacterized protein K20521 BBC1; myosin tail region-interacting protein MTI1
D TRAVEDRAFT_29757 SH3-domain-containing protein K20522 LSB1_2; LAS seventeen-binding protein 1/2
D TRAVEDRAFT_166737 DUF500-domain-containing protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D TRAVEDRAFT_171341 DUF500-domain-containing protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D TRAVEDRAFT_55185 uncharacterized protein K20524 LSB5; LAS seventeen-binding protein 5
D TRAVEDRAFT_43796 1-phosphatidylinositol 4-kinase LSB6 K13711 PI4K2; phosphatidylinositol 4-kinase type 2 [EC:2.7.1.67]
C Others
D TRAVEDRAFT_50307 profilin K05759 PFN; profilin
D TRAVEDRAFT_28597 recombinant Actophorin K05765 CFL; cofilin
D TRAVEDRAFT_165892 adenylate cyclase-binding protein K17261 CAP1_2; adenylyl cyclase-associated protein
D TRAVEDRAFT_27730 kinesin heavy chain K10396 KIF5; kinesin family member 5
B Mucins
C Membrane bound mucins
C Secretory mucins
B Rab GTPases of specific organelles
C Melanosome
C Auto phagosome
C Lipid droplets
D TRAVEDRAFT_61200 ras-domain-containing protein K07910 RAB18; Ras-related protein Rab-18
C Mitochondrion
B Rho GTPase associated proteins
C Rho GTPase-activating proteins
D TRAVEDRAFT_147239 Rho GTPase activation protein K18470 ARHGAP1; Rho GTPase-activating protein 1
D TRAVEDRAFT_43456 uncharacterized protein K20649 ARHGAP39; Rho GTPase-activating protein 39
D TRAVEDRAFT_148584 GTPase activating protein K20643 RGD1; Rho GTPase-activating protein RGD1
D TRAVEDRAFT_29197 uncharacterized protein K08773 RALBP1; RalA-binding protein 1
C Rho guanine nucleotide exchange factors (GEFs)
D TRAVEDRAFT_69252 cytoplasmic protein K05727 DOCK3; dedicator of cytokinesis protein 3
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024