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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Urbifossiella limnaea</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
E        ETAA1_01010 Type III restriction enzyme, res subunit	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        ETAA1_21410 rpoA_1; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        ETAA1_30320 rpoA_2; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        ETAA1_22710 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        ETAA1_22720 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        ETAA1_23460 hypothetical protein	K03048 rpoE; DNA-directed RNA polymerase subunit delta 
E        ETAA1_43910 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
D      Sigma factors
E        ETAA1_00940 sigA_1; RNA polymerase sigma factor SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_10710 rpoD; RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_11060 sigA_2; RNA polymerase sigma factor SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_45410 sigA_3; RNA polymerase sigma factor SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_51880 sigA_4; RNA polymerase sigma factor SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_53980 sigA_5; RNA polymerase sigma factor SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        ETAA1_15420 sigW_1; ECF RNA polymerase sigma factor SigW	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_14600 cnrH_1; RNA polymerase sigma factor CnrH	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_16910 cnrH_2; RNA polymerase sigma factor CnrH	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_17110 carQ_1; RNA polymerase sigma factor CarQ	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_25520 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_31010 rpoE_3; ECF RNA polymerase sigma-E factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_32510 rpoE_4; ECF RNA polymerase sigma-E factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_32570 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_32740 sigR_1; ECF RNA polymerase sigma factor SigR	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_36070 fecI; putative RNA polymerase sigma factor FecI	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_37330 sigD; ECF RNA polymerase sigma factor SigD	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_39320 sigR_2; ECF RNA polymerase sigma factor SigR	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_45520 cnrH_3; RNA polymerase sigma factor CnrH	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_46260 sigE_16; ECF RNA polymerase sigma factor SigE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_48370 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_48530 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_54760 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_56780 sigW_8; ECF RNA polymerase sigma factor SigW	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_57220 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_57600 hypothetical protein	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_58610 cnrH_4; RNA polymerase sigma factor CnrH	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_60350 sigE_24; ECF RNA polymerase sigma factor SigE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_61880 sigE_26; ECF RNA polymerase sigma factor SigE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_62170 sigE_27; ECF RNA polymerase sigma factor SigE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_27560 sigW_4; ECF RNA polymerase sigma factor SigW	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        ETAA1_25750 rpoN1; RNA polymerase sigma-54 factor 1	K03092 rpoN; RNA polymerase sigma-54 factor 
E        ETAA1_45800 fliA; RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        ETAA1_04420 rapA_2; RNA polymerase-associated protein RapA	K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] 
E        ETAA1_47780 hypothetical protein	K02600 nusA; transcription termination/antitermination protein NusA 
E        ETAA1_36050 hypothetical protein	K03625 nusB; transcription antitermination protein NusB 
E        ETAA1_22660 hypothetical protein	K02601 nusG; transcription termination/antitermination protein NusG 
E        ETAA1_19400 rsbU_1; Phosphoserine phosphatase RsbU	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        ETAA1_31830 rsbU_2; Phosphoserine phosphatase RsbU	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        ETAA1_40990 rsbP; Phosphoserine phosphatase RsbP	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        ETAA1_44010 rsbU_3; Phosphoserine phosphatase RsbU	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        ETAA1_62720 rsbU_4; Phosphoserine phosphatase RsbU	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        ETAA1_00120 hypothetical protein	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_11450 hypothetical protein	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_20360 hypothetical protein	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_23810 STAS domain protein	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_24030 spoIIAA; Anti-sigma F factor antagonist	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_58090 btrV; Putative anti-sigma factor antagonist BtrV	K04749 rsbV; anti-sigma B factor antagonist 
E        ETAA1_24040 rsbW; Serine-protein kinase RsbW	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
D      Transcription elongation factors
E        ETAA1_06160 RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor 
E        ETAA1_22940 yocK_2; General stress protein 16O	K06204 dksA; RNA polymerase-binding transcription factor 
E        ETAA1_54000 greA; Transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
D      Transcription termination factor
E        ETAA1_04960 hypothetical protein	K03628 rho; transcription termination factor Rho 
E        ETAA1_09430 hypothetical protein	K03628 rho; transcription termination factor Rho 
E        ETAA1_34760 hypothetical protein	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024