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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Umezawaea sp. Da 62-37</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
E        RM788_27710 DEAD/DEAH box helicase	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        RM788_22080 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        RM788_22300 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        RM788_22295 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        RM788_39490 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
D      Sigma factors
E        RM788_36900 RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor 
E        RM788_03770 sigma-70 family RNA polymerase sigma factor	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor 
E        RM788_36660 sigma-70 family RNA polymerase sigma factor	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor 
E        RM788_03075 sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_08940 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_09135 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_09515 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_09690 RNA polymerase subunit sigma-70	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_10450 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_10620 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_10885 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_12055 sigJ; RNA polymerase sigma factor SigJ	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_12150 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_12255 sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_12650 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_13960 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_15490 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_15980 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_15990 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_17000 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_20470 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_20505 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_21860 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_23035 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_25035 sigM; RNA polymerase sigma factor SigM	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_30005 sigE; RNA polymerase sigma factor SigE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_31250 sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_34635 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_35155 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_39535 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_40115 shbA; RNA polymerase sigma factor ShbA	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_40620 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_40955 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_41495 DUF6596 domain-containing protein	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_46660 DUF6596 domain-containing protein	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_47370 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_48270 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_48280 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_48885 RNA polymerase sigma-70 factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_49280 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_51090 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_51915 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        RM788_13870 SigB/SigF/SigG family RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor 
E        RM788_14050 SigB/SigF/SigG family RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor 
E        RM788_16735 FliA/WhiG family RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        RM788_16265 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        RM788_39435 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB 
E        RM788_22385 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG 
E        RM788_02795 anti-sigma regulatory factor	K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] 
E        RM788_02790 STAS domain-containing protein	K17762 rsbS; rsbT antagonist protein RsbS 
E        RM788_02785 STAS domain-containing protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        RM788_08345 GAF domain-containing protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        RM788_50895 SpoIIE family protein phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        RM788_50900 alpha/beta hydrolase	K19707 rsbQ; sigma-B regulation protein RsbQ 
E        RM788_02990 STAS domain-containing protein	K04749 rsbV; anti-sigma B factor antagonist 
E        RM788_08235 STAS domain-containing protein	K04749 rsbV; anti-sigma B factor antagonist 
E        RM788_13855 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist 
E        RM788_48755 STAS domain-containing protein	K04749 rsbV; anti-sigma B factor antagonist 
E        RM788_13865 anti-sigma factor	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
E        RM788_14045 ATP-binding protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
D      Transcription elongation factors
E        RM788_29485 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
E        RM788_44835 GreA/GreB family elongation factor	K03624 greA; transcription elongation factor GreA 
D      Transcription termination factor
E        RM788_18285 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024