+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Uncinocarpus reesii
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
D UREG_07680 hypothetical protein K06636 SMC1; structural maintenance of chromosome 1
D UREG_06355 chromosome segregation protein sudA K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
D UREG_00954 hypothetical protein K06670 SCC1; cohesin complex subunit SCC1
D UREG_00394 hypothetical protein K06671 STAG1_2; cohesin complex subunit SA-1/2
C Adherin complex
D UREG_04876 bimD protein K11267 PDS5; sister chromatid cohesion protein PDS5
D UREG_00533 hypothetical protein K11268 ESCO; N-acetyltransferase [EC:2.3.1.-]
C CTF18-RFC complex
D UREG_06367 hypothetical protein K11269 CTF18; chromosome transmission fidelity protein 18
D UREG_05129 hypothetical protein K11270 CTF8; chromosome transmission fidelity protein 8
D UREG_00379 hypothetical protein K11271 DSCC1; sister chromatid cohesion protein DCC1
D UREG_03127 activator 1 40 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
D UREG_07656 activator 1 37 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
D UREG_04010 activator 1 subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D UREG_06394 activator 1 38 kDa subunit K10756 RFC3_5; replication factor C subunit 3/5
C Fork protection complex
D UREG_02629 similar to drug resistance protein MdrA K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D UREG_02580 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D UREG_06136 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Other sister chromatid cohesion factors
D UREG_06967 similar to helicase K11273 DDX11; chromosome transmission fidelity protein 1 [EC:5.6.2.7]
D UREG_03229 sepB protein K11274 WDHD1; chromosome transmission fidelity protein 4
D UREG_05792 hypothetical protein K20791 NAA10_11; N-alpha-acetyltransferase 10/11 [EC:2.3.1.255]
D UREG_05345 hypothetical protein K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit
D UREG_04507 hypothetical protein K20793 NAA50; N-alpha-acetyltransferase 50 [EC:2.3.1.258 2.3.1.309]
B Meiosis-specific proteins
C Cohesin complex and associated proteins
D UREG_07680 hypothetical protein K06636 SMC1; structural maintenance of chromosome 1
D UREG_06355 chromosome segregation protein sudA K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
C Synaptonemal complex
C DSB formation-related proteins
D UREG_04998 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D UREG_03792 hypothetical protein K10878 SPO11; meiotic recombination protein SPO11
D UREG_05402 hypothetical protein K12778 HORMAD; meiosis-specific protein
C Others
D UREG_02111 meiotic recombination protein DMC1 K10872 DMC1; meiotic recombination protein DMC1
D UREG_05397 hypothetical protein K15271 HFM1; ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
D UREG_06039 similar to DNA mismatch repair protein MutS K08740 MSH4; DNA mismatch repair protein MSH4
D UREG_05893 hypothetical protein K08741 MSH5; DNA mismatch repair protein MSH5
B Nucleosome assembly factors
C Histones
D UREG_00541 hypothetical protein K11275 H1_5; histone H1/5
D UREG_04002 histone H2A variant K11251 H2A; histone H2A
D UREG_06993 histone H2A K11251 H2A; histone H2A
D UREG_06992 histone H2B K11252 H2B; histone H2B
D UREG_07214 histone H3.3 K11253 H3; histone H3
D UREG_06332 histone H4.2 K11254 H4; histone H4
D UREG_07213 histone H4.1 K11254 H4; histone H4
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
E UREG_04040 hypothetical protein K11279 NAP1L1; nucleosome assembly protein 1-like 1
D CAF-1
E UREG_03857 hypothetical protein K10750 CHAF1A; chromatin assembly factor 1 subunit A
E UREG_02333 hypothetical protein K10751 CHAF1B; chromatin assembly factor 1 subunit B
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
D FACT complex
E UREG_01855 hypothetical protein K09272 SSRP1; FACT complex subunit SSRP1/POB3
E UREG_03177 similar to transcription elongation complex subunit K25639 SUPT16H; FACT complex subunit SPT16
E UREG_07427 nonhistone chromosomal protein 6A K27246 NHP6; non-histone chromosomal protein 6
D Other Histone chaperones and regulators
E UREG_07491 histone chaperone cia1 K10753 ASF1; histone chaperone ASF1
E UREG_00565 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
E UREG_03461 similar to membrane associated protein SLP-2 K11293 HIRA; protein HIRA/HIR1
E UREG_01417 hypothetical protein K11294 NCL; nucleolin
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
D UREG_06312 hypothetical protein K11303 HAT1; histone acetyltransferase 1 [EC:2.3.1.48]
D UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
D UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
D UREG_01025 hypothetical protein K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
D UREG_00733 histone acetyltransferase ESA1 K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48]
D UREG_03835 hypothetical protein K11309 RTT109; regulator of Ty1 transposition protein 109
D UREG_02746 hypothetical protein K20794 NAA40; N-alpha-acetyltransferase 40 [EC:2.3.1.257]
C HAT complexes
D PCAF complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_07191 protein spt3 K11313 SUPT3H; transcription initiation protein SPT3
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_06750 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E UREG_03864 similar to transcription initiation factor tfiid 60 kd subu nit K03131 TAF6; transcription initiation factor TFIID subunit 6
E UREG_07138 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E UREG_05199 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E UREG_00525 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
D STAGA complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_07191 protein spt3 K11313 SUPT3H; transcription initiation protein SPT3
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_06750 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E UREG_03864 similar to transcription initiation factor tfiid 60 kd subu nit K03131 TAF6; transcription initiation factor TFIID subunit 6
E UREG_07138 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E UREG_05199 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E UREG_00525 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E UREG_03498 pre-mRNA splicing factor rse1 K12830 SF3B3; splicing factor 3B subunit 3
D TFTC complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_07191 protein spt3 K11313 SUPT3H; transcription initiation protein SPT3
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_01548 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E UREG_06750 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E UREG_03864 similar to transcription initiation factor tfiid 60 kd subu nit K03131 TAF6; transcription initiation factor TFIID subunit 6
E UREG_01369 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7
E UREG_07138 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E UREG_05199 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E UREG_00525 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E UREG_03498 pre-mRNA splicing factor rse1 K12830 SF3B3; splicing factor 3B subunit 3
D TIP60 complex
E UREG_00733 histone acetyltransferase ESA1 K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_03063 hypothetical protein K11322 EPC; enhancer of polycomb-like protein
E UREG_01912 hypothetical protein K11324 DMAP1; DNA methyltransferase 1-associated protein 1
E UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
E UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
E UREG_05126 similar to keratinolytic protein K11339 MORF4L1; mortality factor 4-like protein 1
E UREG_03272 hypothetical protein K11341 YEATS4; YEATS domain-containing protein 4
E UREG_03640 hypothetical protein K11343 MRGBP; MRG-binding protein
E UREG_07688 hypothetical protein K11344 MEAF6; chromatin modification-related protein EAF6
D HBO1 complex
E UREG_07688 hypothetical protein K11344 MEAF6; chromatin modification-related protein EAF6
D MOZ/MORF complex
E UREG_07688 hypothetical protein K11344 MEAF6; chromatin modification-related protein EAF6
D SAGA complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_07191 protein spt3 K11313 SUPT3H; transcription initiation protein SPT3
E UREG_07487 hypothetical protein K11359 SPT7; transcriptional activator SPT7
E UREG_03751 hypothetical protein K11360 SPT8; transcriptional activator SPT8
E UREG_02921 hypothetical protein K11361 SPT20; transcription factor SPT20
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_04455 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E UREG_06750 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E UREG_03864 similar to transcription initiation factor tfiid 60 kd subu nit K03131 TAF6; transcription initiation factor TFIID subunit 6
E UREG_07138 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E UREG_05199 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E UREG_00525 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E UREG_05419 hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E UREG_03425 CHD1 protein K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
D SLIK complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_07191 protein spt3 K11313 SUPT3H; transcription initiation protein SPT3
E UREG_07487 hypothetical protein K11359 SPT7; transcriptional activator SPT7
E UREG_02921 hypothetical protein K11361 SPT20; transcription factor SPT20
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_04455 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E UREG_06750 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E UREG_03864 similar to transcription initiation factor tfiid 60 kd subu nit K03131 TAF6; transcription initiation factor TFIID subunit 6
E UREG_07138 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E UREG_05199 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E UREG_00525 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E UREG_05419 hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E UREG_03425 CHD1 protein K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E UREG_01060 hypothetical protein K11369 RTG2; retrograde regulation protein 2
D ADA-HAT complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_04455 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E UREG_05783 hypothetical protein K11370 AHC1; ADA HAT complex component 1
D HAT-A2 complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
D ATAC complex
E UREG_00602 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_03319 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E UREG_02219 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E UREG_06610 hypothetical protein K11315 TADA3; transcriptional adapter 3
E UREG_04455 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E UREG_02536 similar to repressor protein K21751 DR1; down-regulator of transcription 1
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
D HATB complex
E UREG_06312 hypothetical protein K11303 HAT1; histone acetyltransferase 1 [EC:2.3.1.48]
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
E UREG_05677 hypothetical protein K11372 HIF1; HAT1-interacting factor 1
D NSL complex
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
D MSL complex
D NuA3 complex
E UREG_05258 protein mst2 K11378 SAS3; histone acetyltransferase SAS3 [EC:2.3.1.48]
E UREG_05051 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit
E UREG_01873 hypothetical protein K11380 NTO1; NuA3 HAT complex component NTO1
D NuA4 complex
E UREG_00733 histone acetyltransferase ESA1 K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48]
E UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E UREG_01692 hypothetical protein K11396 YNG2; chromatin modification-related protein YNG2
E UREG_03272 hypothetical protein K11341 YEATS4; YEATS domain-containing protein 4
E UREG_04771 hypothetical protein K11397 EAF1; chromatin modification-related protein VID21
E UREG_01912 hypothetical protein K11324 DMAP1; DNA methyltransferase 1-associated protein 1
E UREG_05126 similar to keratinolytic protein K11339 MORF4L1; mortality factor 4-like protein 1
E UREG_07688 hypothetical protein K11344 MEAF6; chromatin modification-related protein EAF6
E UREG_03063 hypothetical protein K11322 EPC; enhancer of polycomb-like protein
E UREG_00923 hypothetical protein K11400 ARP4; actin-related protein 4
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
E UREG_01693 histone deacetylase phd1 K11483 HOS2; histone deacetylase HOS2 [EC:3.5.1.98]
E UREG_02642 hypothetical protein K11484 HOS3; histone deacetylase HOS3 [EC:3.5.1.98]
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
E UREG_01890 similar to silencing information regulator K11414 SIRT4; NAD-dependent protein deacetylase/lipoamidase sirtuin 4 [EC:2.3.1.286 2.3.1.313]
E UREG_01140 hypothetical protein K11415 SIRT5; NAD-dependent protein deacetylase sirtuin 5 [EC:2.3.1.286]
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
E UREG_02697 hypothetical protein K11644 SIN3A; paired amphipathic helix protein Sin3a
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
E UREG_02956 hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18
D BRAF-HDAC complex
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D REST complex
E UREG_02697 hypothetical protein K11644 SIN3A; paired amphipathic helix protein Sin3a
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D SHIP complex
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D MiDAC complex
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D SMART complex
D Other HDAC associated proteins
E UREG_04872 hypothetical protein K26244 PHF12; transcriptional regulatory protein PHF12/RCO1
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
E UREG_00487 hypothetical protein K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354]
E UREG_05056 hypothetical protein K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360]
E UREG_07821 similar to SET1 protein K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
E UREG_03062 hypothetical protein K05302 SETD6; N-lysine methyltransferase SETD6 [EC:2.1.1.-]
E UREG_04172 hypothetical protein K23700 SET2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359]
E UREG_05902 hypothetical protein K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355]
E UREG_00803 hypothetical protein K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362]
D PRMTs (protein arginine metyltransferases)
E UREG_07327 HNRNP arginine N-methyltransferase K11434 PRMT1; type I protein arginine methyltransferase [EC:2.1.1.319]
E UREG_07241 similar to protein methyltransferase K11436 PRMT3; type I protein arginine methyltransferase [EC:2.1.1.319]
E UREG_05212 similar to protein methyltransferase K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
E UREG_00965 hypothetical protein K18477 RMT2; type IV protein arginine methyltransferase [EC:2.1.1.322]
C HMT complexes
D COMPASS/SET1 complex
E UREG_07821 similar to SET1 protein K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
E UREG_07544 hypothetical protein K14960 CXXC1; COMPASS component SPP1
E UREG_07096 hypothetical protein K14961 RBBP5; COMPASS component SWD1
E UREG_04969 similar to WD repeat protein K14962 WDR82; COMPASS component SWD2
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
D COMPASS/SET1 complex (yeast)
E UREG_07821 similar to SET1 protein K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
E UREG_07544 hypothetical protein K14960 CXXC1; COMPASS component SPP1
E UREG_07096 hypothetical protein K14961 RBBP5; COMPASS component SWD1
E UREG_04969 similar to WD repeat protein K14962 WDR82; COMPASS component SWD2
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
E UREG_02533 hypothetical protein K14967 BRE2; COMPASS component BRE2
D MLL-HCF complex
E UREG_07096 hypothetical protein K14961 RBBP5; COMPASS component SWD1
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
D MLL3/MLL4 complex
E UREG_07096 hypothetical protein K14961 RBBP5; COMPASS component SWD1
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
D Dot1-containing complex
E UREG_05056 hypothetical protein K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360]
C Histone demethylases
D UREG_00939 hypothetical protein K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
D UREG_03885 hypothetical protein K11446 KDM5; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
E UREG_00939 hypothetical protein K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
E UREG_04186 S-phase kinase-associated protein 1A K03094 SKP1; S-phase kinase-associated protein 1
D Noncanonical PRC1 (PRC1.3/1.5)
E UREG_03450 casein kinase II beta subunit K03115 CSNK2B; casein kinase II subunit beta
E UREG_05633 casein kinase II beta 1 subunit K03115 CSNK2B; casein kinase II subunit beta
E UREG_02780 hypothetical protein K11805 DCAF7; DDB1- and CUL4-associated factor 7
D Noncanonical PRC1 (PRC1.6)
E UREG_01056 WD-repeat protein 5 K14963 WDR5; COMPASS component SWD3
E UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D PRC2.1
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
D PRC2.2
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
D UREG_00949 similar to NAD-dependent deacetylase SIRT2 K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
D UREG_03407 hst4p protein K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
D UREG_05367 similar to HST1 protein K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
C Other histone modification proteins
D UREG_06134 hypothetical protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
D UREG_05458 EPD1 K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-]
D UREG_04717 similar to beta glucanosyltransferase Gel2p K22834 GAS3; 1,3-beta-glucanosyltransferase GAS3 [EC:2.4.1.-]
D UREG_00286 glycolipid-anchored surface protein 5 K22836 GAS5; 1,3-beta-glucanosyltransferase GAS5 [EC:2.4.1.-]
B Chromosome condensation proteins
C Condensin I
D UREG_02266 structural maintenance of chromosome 2 K06674 SMC2; structural maintenance of chromosome 2
D UREG_06204 similar to Smc4l1 protein K06675 SMC4; structural maintenance of chromosome 4
D UREG_07789 hypothetical protein K06676 BRRN1; condensin complex subunit 2
D UREG_06974 hypothetical protein K06677 YCS4; condensin complex subunit 1
D UREG_03979 hypothetical protein K06678 YCG1; condensin complex subunit 3
C Condensin II
D UREG_02266 structural maintenance of chromosome 2 K06674 SMC2; structural maintenance of chromosome 2
D UREG_06204 similar to Smc4l1 protein K06675 SMC4; structural maintenance of chromosome 4
C Other regulators of chromosome condensation
D UREG_02997 DNA topoisomerase 2 K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
D UREG_02581 hypothetical protein K11493 RCC1; regulator of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
E UREG_03502 histone H3 K11495 CENPA; histone H3-like centromeric protein A
E UREG_03195 hypothetical protein K11497 CENPC; centromere protein C
E UREG_07813 similar to kinesin K11498 CENPE; centromeric protein E
E UREG_03525 hypothetical protein K11501 CENPI; centromere protein I
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
F UREG_07350 hypothetical protein K11547 NDC80; kinetochore protein NDC80
F UREG_05183 hypothetical protein K11548 NUF2; kinetochore protein Nuf2
D Mis6 complex
E UREG_03525 hypothetical protein K11501 CENPI; centromere protein I
E UREG_03195 hypothetical protein K11497 CENPC; centromere protein C
E UREG_05604 hypothetical protein K11551 MIS15; central kinetochore subunit Mis15/CHL4
E UREG_00398 hypothetical protein K11552 MAL2; central kinetochore subunit Mal2/MCM21
E UREG_00339 hypothetical protein K11553 DAD1; DASH complex subunit DAD1
E UREG_05127 hypothetical protein K11696 CNL2; centromere-localized protein 2
E UREG_06399 hypothetical protein K11697 FTA7; kinetochore protein Fta7
D COMA complex
E UREG_00398 hypothetical protein K11552 MAL2; central kinetochore subunit Mal2/MCM21
D NMS complex
E NDC80 complex
F UREG_07350 hypothetical protein K11547 NDC80; kinetochore protein NDC80
F UREG_05183 hypothetical protein K11548 NUF2; kinetochore protein Nuf2
F UREG_06492 hypothetical protein K11557 SPC24; kinetochore protein Spc24, fungi type
F UREG_05712 hypothetical protein K11558 SPC25; kinetochore protein Spc25, fungi type
E MIND kinetochore complex
F UREG_02918 hypothetical protein K11559 mis12; kinetochore protein Mis12/MTW1
F UREG_00177 hypothetical protein K11560 mis13; kinetochore protein Mis13/DSN1
F UREG_06882 hypothetical protein K11561 mis14; kinetochor protein Mis14/NSL1
F UREG_01895 hypothetical protein K11562 NNF1; kinetochore protein NNF1
E UREG_02327 hypothetical protein K11563 SPC7; kinetochore protein Spc7/SPC105
D MIS16-MIS18 complex
E UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
D DASH complex
E UREG_03627 hypothetical protein K11566 ASK1; DASH complex subunit ASK1
E UREG_00339 hypothetical protein K11553 DAD1; DASH complex subunit DAD1
E UREG_05699 hypothetical protein K11567 DAD2; DASH complex subunit DAD2
E UREG_05535 hypothetical protein K11572 SPC19; DASH complex subunit SPC19
D CBF3 complex
E UREG_04186 S-phase kinase-associated protein 1A K03094 SKP1; S-phase kinase-associated protein 1
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
E UREG_07228 hypothetical protein K06679 MAD1; mitotic spindle assembly checkpoint protein MAD1
E UREG_06115 mitotic spindle checkpoint component mad2 K02537 MAD2; mitotic spindle assembly checkpoint protein MAD2
E UREG_00376 hypothetical protein K13728 MAD2L2; mitotic spindle assembly checkpoint protein MAD2B
E UREG_01083 similar to spindle assembly checkpoint protein SLDA K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1]
D Motor proteins
E UREG_07813 similar to kinesin K11498 CENPE; centromeric protein E
E RZZ complex
F UREG_04765 hypothetical protein K11578 ZW10; protein transport protein DSL1/ZW10
E Dynein complex
F UREG_05232 dynein heavy chain K10413 DYNC1H; dynein cytoplasmic 1 heavy chain
F UREG_01514 similar to cytoplasmic dynein intermediate chain K10415 DYNC1I; dynein cytoplasmic 1 intermediate chain
F UREG_03684 hypothetical protein K10416 DYNC1LI; dynein cytoplasmic 1 light intermediate chain
D Protein kinases
E UREG_07696 hypothetical protein K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]
E UREG_05430 mitogen-activated protein kinase K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
E UREG_05976 G2-specific protein kinase nimA K20872 NEK2; serine/threonine-protein kinase Nek2 [EC:2.7.11.1]
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
E UREG_04602 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E UREG_02031 protein phosphatase PP2A regulatory subunit A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E UREG_02693 protein phosphatase PP2A regulatory subunit B K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E UREG_03954 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
D UREG_01217 hypothetical protein K11585 CBX1; chromobox protein 1
D UREG_04117 hypothetical protein K11587 CBX5; chromobox protein 5
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D UREG_03572 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UREG_05465 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D UREG_02697 hypothetical protein K11644 SIN3A; paired amphipathic helix protein Sin3a
D UREG_00572 hypothetical protein K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
D UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
D UREG_05902 hypothetical protein K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355]
D UREG_05464 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B Gene silencing
C RISC (RNA-induced silencing complex)
D UREG_05231 hypothetical protein K11592 DICER1; endoribonuclease Dicer [EC:3.1.26.-]
D UREG_02898 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
D UREG_07489 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
D UREG_00407 similar to RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D UREG_04759 ATP-dependent RNA helicase ded1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
C piRNA pathway
D UREG_03913 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D UREG_06980 similar to ATP-dependent RNA helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
E UREG_04116 hypothetical protein K11595 CHP1; chromo domain-containing protein 1
E UREG_02898 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E UREG_07489 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
D RDRC (RNA-directed RNA polymerase complex)
E UREG_00448 hypothetical protein K11699 RDR; RNA-dependent RNA polymerase [EC:2.7.7.48]
E UREG_03752 hypothetical protein K11701 HRR1; helicase required for RNAi-mediated heterochromatin assembly 1 [EC:5.6.2.5]
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E UREG_04060 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
E UREG_05231 hypothetical protein K11592 DICER1; endoribonuclease Dicer [EC:3.1.26.-]
E UREG_02898 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E UREG_07489 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
D Other miRNA pathway proteins
E UREG_07598 hypothetical protein K14289 XPO5; exportin-5
E UREG_06146 hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
D UREG_04297 similar to poly(ADP)-ribose polymerase K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30]
D UREG_07221 hypothetical protein K16489 SFI1; protein SFI1
D UREG_02997 DNA topoisomerase 2 K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C Pericentriolar materials (PCM)
D Centriolar satellite
E UREG_03207 hypothetical protein K16536 HOOK3; protein HOOK3
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D UREG_03279 hypothetical protein K16315 GSG2; serine/threonine-protein kinase haspin [EC:2.7.11.1]
D UREG_03139 protein kinase gsk3 K03083 GSK3B; glycogen synthase kinase 3 beta [EC:2.7.11.26]
D UREG_03689 vacuolar ATP synthase 16 kDa proteolipid subunit 2 K04345 PKA; protein kinase A [EC:2.7.11.11]
D UREG_06328 cAMP-dependent protein kinase type 2 K04345 PKA; protein kinase A [EC:2.7.11.11]
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
E UREG_04467 tubulin gamma chain K10389 TUBG; tubulin gamma
E UREG_02437 hypothetical protein K16569 TUBGCP2; gamma-tubulin complex component 2
E UREG_07458 hypothetical protein K16570 TUBGCP3; gamma-tubulin complex component 3
E UREG_03947 hypothetical protein K16572 TUBGCP5; gamma-tubulin complex component 5
D Other tubulins
E UREG_01340 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E UREG_04085 tubulin alpha chain K07374 TUBA; tubulin alpha
E UREG_05920 tubulin beta chain K07375 TUBB; tubulin beta
D Dynactin complex
E UREG_06531 hypothetical protein K04648 DCTN1; dynactin 1
E UREG_07527 hypothetical protein K10426 DCTN4; dynactin 4
E UREG_00169 similar to dynactin Arp1 p25 subunit RO12 K10427 DCTN5; dynactin 5
E UREG_00576 actin-1 K16575 ACTR1; centractin
D BRISC complex
D Microtubule-associated proteins
E UREG_03631 hypothetical protein K16578 CLASP1_2; CLIP-associating protein 1/2
E UREG_07534 hypothetical protein K10436 MAPRE; microtubule-associated protein, RP/EB family
E UREG_02025 developmentally regulated GTP-binding protein 1 K06944 DRG1; developmentally-regulated GTP-binding protein 1 [EC:3.6.5.-]
E UREG_04375 GTP-binding protein 1 K27705 DRG2; developmentally-regulated GTP-binding protein 2 [EC:3.6.5.-]
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
E UREG_03296 calmodulin K02183 CALM; calmodulin
D Regulators of centriole replication
E UREG_03460 GTP-binding protein YchF K19788 OLA1; obg-like ATPase 1
E UREG_05266 hypothetical protein K03362 FBXW1_11; F-box and WD-40 domain protein 1/11
E UREG_07532 hypothetical protein K03362 FBXW1_11; F-box and WD-40 domain protein 1/11
E UREG_03487 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran
E UREG_05694 exportin-1 K14290 XPO1; exportin-1
D Other centrosome duplication proteins
E UREG_03429 pre-mRNA splicing factor CLF1 K12869 CRN; crooked neck
E UREG_03958 DNA replication licensing factor mcm5 K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
E UREG_03390 hypothetical protein K02603 ORC1; origin recognition complex subunit 1
E UREG_04193 hypothetical protein K02604 ORC2; origin recognition complex subunit 2
E UREG_01485 hypothetical protein K02605 ORC3; origin recognition complex subunit 3
E UREG_04806 hypothetical protein K16732 PRC1; Ase1/PRC1/MAP65 family protein
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Gypsy chromatin insulator complex
C Other centrosome associated proteins
D UREG_06649 hypothetical protein K16743 ASPM; abnormal spindle-like microcephaly-associated protein
D UREG_00754 cell division control protein 42 K04393 CDC42; cell division control protein 42
D UREG_06305 hypothetical protein K07195 EXOC7; exocyst complex component 7
D UREG_00839 hypothetical protein K07192 FLOT; flotillin
D UREG_00173 DNA replication licensing factor mcm2 K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D UREG_06543 DNA replication licensing factor mcm3 K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D UREG_02573 GTP-binding protein SAS1 K07901 RAB8A; Ras-related protein Rab-8A
D UREG_02902 hypothetical protein K25164 WRAP73; WD repeat-containing protein WRAP73
D UREG_05443 spastin K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
D UREG_00503 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
C Spindle formation proteins
D UREG_03511 HRC135 protein K18423 CSE1; exportin-2 (importin alpha re-exporter)
D UREG_02375 similar to kinesin K10398 KIF11; kinesin family member 11
D UREG_06214 KLPA protein K10405 KIFC1; kinesin family member C1 (minus-end-directed kinesin ATPase) [EC:5.6.1.4]
D UREG_07873 importin alpha subunit K15042 KPNA5_6; importin subunit alpha-6/7
D UREG_02844 hypothetical protein K14293 KPNB1; importin subunit beta-1
D UREG_05079 hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
D UREG_05924 hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107
D UREG_05688 hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133
D UREG_03417 hypothetical protein K14303 NUP160; nuclear pore complex protein Nup160
D UREG_04999 hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205
D UREG_06388 hypothetical protein K20724 TMEM33; transmembrane protein 33
D UREG_04612 nuclear migration protein nudF K16794 PAFAH1B1; platelet-activating factor acetylhydrolase IB subunit alpha
D UREG_07677 nuclear migration protein nudF K16794 PAFAH1B1; platelet-activating factor acetylhydrolase IB subunit alpha
D UREG_05729 Poly(A)+ RNA export protein K14298 RAE1; mRNA export factor
D UREG_03487 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran
D UREG_01569 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
D UREG_01471 protein FAM96B K26403 CIAO2; cytosolic iron-sulfur assembly component 2
D UREG_07205 DNA repair helicase RAD3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D UREG_02025 developmentally regulated GTP-binding protein 1 K06944 DRG1; developmentally-regulated GTP-binding protein 1 [EC:3.6.5.-]
D UREG_05406 hypothetical protein K24394 STU2; protein STU2
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
D UREG_01885 hypothetical protein K02365 ESP1; separase [EC:3.4.22.49]
C APC/C complex
D UREG_00544 hypothetical protein K03348 APC1; anaphase-promoting complex subunit 1
D UREG_00991 hypothetical protein K03349 APC2; anaphase-promoting complex subunit 2
D UREG_00794 protein bimA K03350 APC3; anaphase-promoting complex subunit 3
D UREG_02843 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4
D UREG_00460 hypothetical protein K03352 APC5; anaphase-promoting complex subunit 5
D UREG_03951 hypothetical protein K03353 APC6; anaphase-promoting complex subunit 6
D UREG_03964 hypothetical protein K03355 APC8; anaphase-promoting complex subunit 8
D UREG_02850 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10
D UREG_07105 WD-repeat containing protein slp1 K03363 CDC20; cell division cycle 20, cofactor of APC complex
C Aurora kinases
D UREG_00906 serine/threonine-protein kinase Eg2 K08850 AURKX; aurora kinase, other [EC:2.7.11.1]
D Regulators of Aurora kinases
E UREG_03861 hypothetical protein K16833 PPP1R2; protein phosphatase inhibitor 2
E UREG_01166 serine/threonine-protein kinase PAK 3 K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
D UREG_04869 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D UREG_06366 hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
D UREG_07312 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
C PBAF complex
D UREG_04869 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D UREG_06366 hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
D UREG_07312 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
C GBAF(ncBAF) complex
D UREG_06366 hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
D UREG_07312 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
C CHRAC complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D UREG_03406 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
C RSF complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
C WICH complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
C B-WICH complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D UREG_02202 similar to DNA repair and recombination protein Rhp26p K10841 ERCC6; DNA excision repair protein ERCC-6
D UREG_02713 myosin-5 K10356 MYO1; myosin I
D UREG_01078 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D UREG_01851 U2 snRNP component prp10 K12828 SF3B1; splicing factor 3B subunit 1
C NORC complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
C BRF complex
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
C NuRD complex
D UREG_01737 histone deacetylase RPD3 K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
D UREG_00572 hypothetical protein K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
D UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
C NuRF complex
D UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
C NuRF complex (fruit fly)
D UREG_00559 chromatin remodelling complex ATPase chain ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D UREG_03911 chromatin assembly factor 1 subunit C K10752 RBBP4; histone-binding protein RBBP4
C CERF complex
C SRCAP complex
D UREG_02092 helicase SWR1 K11661 SRCAP; helicase SRCAP/SWR1 [EC:5.6.2.-]
D UREG_02626 hypothetical protein K11662 ACTR6; actin-related protein 6
D UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
D UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
D UREG_01912 hypothetical protein K11324 DMAP1; DNA methyltransferase 1-associated protein 1
D UREG_03272 hypothetical protein K11341 YEATS4; YEATS domain-containing protein 4
D UREG_01004 hypothetical protein K11663 ZNHIT1; zinc finger HIT domain-containing protein 1
D UREG_00742 hypothetical protein K11664 VPS72; vacuolar protein sorting-associated protein 72
C INO80 complex
D UREG_04322 potential DNA-dependent ATPase Ino80p K11665 INO80; chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
D UREG_02802 hypothetical protein K11667 INO80C; INO80 complex subunit C
D UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
D UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
D UREG_02801 hypothetical protein K11672 ACTR5; actin-related protein 5
D UREG_01588 hypothetical protein K11673 ACTR8; actin-related protein 8
C INO80 complex (yeast)
D UREG_04322 potential DNA-dependent ATPase Ino80p K11665 INO80; chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
D UREG_04753 hypothetical protein K11675 IES1; Ino eighty subunit 1
D UREG_06439 hypothetical protein K11676 IES2; Ino eighty subunit 2
D UREG_02802 hypothetical protein K11667 INO80C; INO80 complex subunit C
D UREG_05051 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit
D UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
D UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
D UREG_00923 hypothetical protein K11400 ARP4; actin-related protein 4
D UREG_02801 hypothetical protein K11672 ACTR5; actin-related protein 5
D UREG_01588 hypothetical protein K11673 ACTR8; actin-related protein 8
C RSC complex
D UREG_06971 hypothetical protein K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
D UREG_07335 similar to nuclear localization protein K11761 NPL6; chromatin structure-remodeling complex protein RSC7
D UREG_01193 hypothetical protein K11763 RSC9; chromatin structure-remodeling complex subunit RSC9
D UREG_02535 hypothetical protein K11768 ARP9; actin-related protein 9
D UREG_05639 hypothetical protein K11770 SFH1; chromatin structure-remodeling complex subunit SFH1
D UREG_04333 SNF2-family ATP dependent chromatin remodeling factor snf21 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
C SWI/SNF complex
D UREG_07450 hypothetical protein K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1
D UREG_04333 SNF2-family ATP dependent chromatin remodeling factor snf21 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
D UREG_04869 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D UREG_02535 hypothetical protein K11768 ARP9; actin-related protein 9
D UREG_05051 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit
C SWR1 complex
D UREG_02092 helicase SWR1 K11661 SRCAP; helicase SRCAP/SWR1 [EC:5.6.2.-]
D UREG_00923 hypothetical protein K11400 ARP4; actin-related protein 4
D UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
D UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
D UREG_02626 hypothetical protein K11662 ACTR6; actin-related protein 6
D UREG_03272 hypothetical protein K11341 YEATS4; YEATS domain-containing protein 4
D UREG_01004 hypothetical protein K11663 ZNHIT1; zinc finger HIT domain-containing protein 1
D UREG_00742 hypothetical protein K11664 VPS72; vacuolar protein sorting-associated protein 72
D UREG_01912 hypothetical protein K11324 DMAP1; DNA methyltransferase 1-associated protein 1
D UREG_05135 hypothetical protein K11684 BDF1; bromodomain-containing factor 1
C ASTRA complex
D UREG_03953 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
D UREG_05120 similar to Ruvbl1 protein K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4]
D UREG_04138 similar to chromatin remodeling complex component Rvb2p K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3]
D UREG_01837 hypothetical protein K11137 TELO2; telomere length regulation protein
D UREG_00761 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C Other chromatin remodeling factors
D UREG_07649 hypothetical protein K14439 SMARCAD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
D UREG_04426 similar to lymphoid specific helicase variant3 K19001 HELLS; ATP-dependent DNA helicase
#
AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
C IHF (integration host factor)
C Other nucleoid associated proteins
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
C Divisome proteins
C Inhibitors of FtsZ assembly
C Other chromosome partitioning proteins
D UREG_03085 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D UREG_01306 ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UREG_05404 hypothetical protein K03978 engB; GTP-binding protein
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2025