+F Repair protein KO
#
DNA Repair and Recombination Proteins - Uncinocarpus reesii
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UREG_06154 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E UREG_05676 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UREG_03494 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E UREG_01863 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E UREG_00309 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E UREG_01084 DNA-(apurinic or apyrimidinic site) lyase 1 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E UREG_00453 similar to DNA lyase K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F UREG_04844 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F UREG_07714 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F UREG_04860 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
F UREG_04635 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F UREG_06843 DNA polymerase epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F UREG_05675 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F UREG_03406 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E UREG_06643 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E UREG_00539 DNA-repair protein rad2 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E UREG_00758 DNA ligase (Polydeoxyribonucleotide synthase [ATP]) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E UREG_02235 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E UREG_04789 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E UREG_01920 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E UREG_04297 similar to poly(ADP)-ribose polymerase K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F UREG_01297 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F UREG_02401 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F UREG_04179 UV excision repair protein Rad23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F UREG_04145 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UREG_05000 hypothetical protein K10609 CUL4; cullin 4
F UREG_00164 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F UREG_07796 hypothetical protein K15082 RAD7; DNA repair protein RAD7
F UREG_07797 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F UREG_07095 DNA-directed RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F UREG_02143 DNA-directed RNA polymerase II 138 kDa polypeptide K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F UREG_02142 DNA-directed RNA polymerase II 138 kDa polypeptide K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F UREG_06452 DNA-directed RNA polymerase II 45 kDa polypeptide K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F UREG_01395 DNA-directed RNA polymerase II 16 kDa polypeptide K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F UREG_07175 DNA-directed RNA polymerases II 24 kDa polypeptide K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F UREG_01562 DNA-directed RNA polymerase II 19 kDa polypeptide K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F UREG_00664 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F UREG_00801 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F UREG_07793 DNA-directed RNA polymerase II 13.3 kDa polypeptide K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F UREG_04145 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UREG_05000 hypothetical protein K10609 CUL4; cullin 4
F UREG_00164 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F UREG_02229 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F UREG_02202 similar to DNA repair and recombination protein Rhp26p K10841 ERCC6; DNA excision repair protein ERCC-6
F UREG_04050 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E UREG_03902 DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E UREG_07205 DNA repair helicase RAD3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E UREG_05319 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E UREG_04075 suppressor of stem-loop protein 1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E UREG_05209 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E UREG_02632 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E UREG_07896 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E UREG_07806 serine/threonine-protein kinase crk1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E UREG_04292 hypothetical protein K06634 CCNH; cyclin H
E UREG_02497 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E UREG_05682 hypothetical protein K07466 RFA1; replication factor A1
E UREG_00315 hypothetical protein K10739 RFA2; replication factor A2
D Other NER factors
E UREG_04020 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E UREG_05612 mating-type switching protein swi10 K10849 ERCC1; DNA excision repair protein ERCC-1
E UREG_04521 MUS38 protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E UREG_02325 similar to xeroderma pigmentosum group G complementing factor K10846 ERCC5; DNA excision repair protein ERCC-5
E UREG_00758 DNA ligase (Polydeoxyribonucleotide synthase [ATP]) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E UREG_01569 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E UREG_01074 hypothetical protein K03869 CUL3; cullin 3
E UREG_04641 hypothetical protein K03872 ELOC; elongin-C
E UREG_00842 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E UREG_06875 DNA mismatch repair protein msh-2 K08735 MSH2; DNA mismatch repair protein MSH2
E UREG_07739 similar to Msh3 protein K08736 MSH3; DNA mismatch repair protein MSH3
E UREG_02739 DNA mismatch repair protein msh6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E UREG_05222 similar to DNA mismatch repair protein mutL K08734 MLH1; DNA mismatch repair protein MLH1
E UREG_06800 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E UREG_04844 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E UREG_07714 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E UREG_04860 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E UREG_04635 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E UREG_05682 hypothetical protein K07466 RFA1; replication factor A1
E UREG_00315 hypothetical protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E UREG_06392 similar to replication factor C protein K10754 RFC1; replication factor C subunit 1
E UREG_03127 activator 1 40 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
E UREG_07656 activator 1 37 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
E UREG_06394 activator 1 38 kDa subunit K10756 RFC3_5; replication factor C subunit 3/5
E UREG_04010 activator 1 subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E UREG_06643 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E UREG_06195 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E UREG_00758 DNA ligase (Polydeoxyribonucleotide synthase [ATP]) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E UREG_05464 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E UREG_04719 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E UREG_00600 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E UREG_04719 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E UREG_00600 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E UREG_03415 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E UREG_03415 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E UREG_03615 hypothetical protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E UREG_05569 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E UREG_05436 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E UREG_07082 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E UREG_01007 similar to ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E UREG_01007 similar to ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E UREG_05495 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D RPA (replication factor A)
E UREG_05682 hypothetical protein K07466 RFA1; replication factor A1
E UREG_00315 hypothetical protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E UREG_04235 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E UREG_05966 similar to structural maintenance of chromosome protein K22803 SMC5; structural maintenance of chromosomes protein 5
E UREG_06981 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E UREG_02542 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E UREG_01204 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E UREG_03696 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E UREG_07258 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E UREG_03419 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E UREG_04388 hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E UREG_07101 hypothetical protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E UREG_03884 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E UREG_07292 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E UREG_05126 similar to keratinolytic protein K11339 MORF4L1; mortality factor 4-like protein 1
E UREG_05443 spastin K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E UREG_06769 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E UREG_06747 hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E UREG_04244 MUS51 protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E UREG_05499 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E UREG_04719 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E UREG_00600 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E UREG_05063 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E UREG_03965 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E UREG_00778 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E UREG_04789 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E UREG_07727 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E UREG_01007 similar to ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E UREG_05495 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E UREG_01871 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E UREG_03415 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E UREG_01837 hypothetical protein K11137 TELO2; telomere length regulation protein
E UREG_05237 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E UREG_04607 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E UREG_05464 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D UREG_03745 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D UREG_05092 hypothetical protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D UREG_02389 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D UREG_01028 MUS42 protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D UREG_00451 similar to polymerase zeta subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D UREG_04859 DNA repair protein rad18 K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D UREG_04997 similar to dna repair protein rad8 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D UREG_05360 ubiquitin-conjugating enzyme variant MMS2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D UREG_04482 ubiquitin-conjugating enzyme E2 N K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D UREG_06643 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D UREG_05456 30 kDa heat shock protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D UREG_03555 NUV101 protein K10903 HUS1; HUS1 checkpoint protein
D UREG_00601 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D UREG_01442 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D UREG_03127 activator 1 40 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
D UREG_07656 activator 1 37 kDa subunit K10755 RFC2_4; replication factor C subunit 2/4
D UREG_06394 activator 1 38 kDa subunit K10756 RFC3_5; replication factor C subunit 3/5
D UREG_04010 activator 1 subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D UREG_00601 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D UREG_02629 similar to drug resistance protein MdrA K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D UREG_02580 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D UREG_06136 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D UREG_01837 hypothetical protein K11137 TELO2; telomere length regulation protein
D UREG_00761 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D UREG_04022 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D UREG_03132 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D UREG_02578 similar to UVSB PI-3 kinase K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D UREG_04998 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D UREG_05390 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D UREG_07803 similar to calcium/calmodulin-dependent protein kinase II alpha K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D UREG_01076 M-phase inducer phosphatase K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D UREG_01748 DNA damage checkpoint protein rad24 K06630 YWHAE; 14-3-3 protein epsilon
D UREG_07864 14-3-3 protein epsilon K06630 YWHAE; 14-3-3 protein epsilon
D UREG_00889 similar to protein kinase K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D UREG_07540 forkhead box protein C2 K24664 FKH; forkhead protein FKH
D UREG_06837 similar to vacuolar sorting protein 4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D UREG_05413 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D UREG_01078 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D UREG_01330 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D UREG_07216 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
D UREG_01700 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D UREG_04957 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D UREG_00734 pre-mRNA splicing factor cef-1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D UREG_01980 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D UREG_03391 pre-mRNA splicing factor prp46 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D UREG_06723 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UREG_06803 ribonucleoside-diphosphate reductase large chain 1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D UREG_04965 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UREG_06154 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E UREG_05676 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UREG_05551 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E UREG_05347 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E UREG_00309 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D UREG_06723 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024