+D GENES KO #

  KEGG Orthology (KO) - Uruburuella suis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:usu00010] D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ78_00820 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02805 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LVJ78_11205 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LVJ78_02425 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LVJ78_00235 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_07525 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_11155 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LVJ78_00365 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LVJ78_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ78_06620 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LVJ78_05150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LVJ78_05155 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_00290 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_08360 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_10015 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:usu00020] D LVJ78_09500 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LVJ78_10420 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D LVJ78_10695 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LVJ78_06465 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LVJ78_09495 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D LVJ78_09490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09460 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LVJ78_09465 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LVJ78_09515 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LVJ78_09510 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LVJ78_09525 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ78_09520 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ78_10030 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D LVJ78_06200 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_10200 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D LVJ78_05150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LVJ78_05155 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:usu00030] D LVJ78_00820 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02805 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02785 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ78_02790 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D LVJ78_00735 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D LVJ78_00220 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LVJ78_06380 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LVJ78_03865 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D LVJ78_10635 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D LVJ78_07495 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LVJ78_05925 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_05195 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LVJ78_02780 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D LVJ78_02775 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D LVJ78_00950 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D LVJ78_10495 PQQ-dependent sugar dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D LVJ78_10710 gluconokinase, GntK/IdnK-type K00851 idnK; gluconokinase [EC:2.7.1.12] D LVJ78_11205 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:usu00040] D LVJ78_11805 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LVJ78_02740 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ78_06380 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LVJ78_09200 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D LVJ78_09205 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] C 00051 Fructose and mannose metabolism [PATH:usu00051] D LVJ78_02515 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LVJ78_09205 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D LVJ78_11205 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LVJ78_02425 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LVJ78_10065 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:usu00052] D LVJ78_10015 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LVJ78_11820 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LVJ78_02740 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism [PATH:usu00053] D LVJ78_11805 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:usu00500] D LVJ78_04455 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D LVJ78_02740 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ78_04575 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D LVJ78_04580 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D LVJ78_04565 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D LVJ78_04585 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D LVJ78_04570 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D LVJ78_10010 glycoside hydrolase family 65 protein K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D LVJ78_10005 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D LVJ78_00840 alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ78_00820 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02805 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02515 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:usu00520] D LVJ78_07475 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LVJ78_02515 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LVJ78_12295 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LVJ78_08205 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D LVJ78_12300 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LVJ78_02835 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D LVJ78_07535 HAD family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D LVJ78_00780 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D LVJ78_00765 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D LVJ78_00030 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LVJ78_03945 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ78_01885 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D LVJ78_05080 acetyltransferase K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203] D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_02740 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ78_11805 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LVJ78_11820 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LVJ78_10065 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ78_00820 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02805 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_05005 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LVJ78_04575 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:usu00620] D LVJ78_05150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LVJ78_05155 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06800 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_03645 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_08360 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D LVJ78_06585 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10250 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10255 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_09670 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D LVJ78_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ78_08685 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LVJ78_10585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ78_10590 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ78_08030 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_06610 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D LVJ78_00290 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LVJ78_01485 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D LVJ78_08580 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D LVJ78_01940 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D LVJ78_05875 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D LVJ78_03720 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D LVJ78_05700 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D LVJ78_08550 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_10200 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D LVJ78_10030 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D LVJ78_06200 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LVJ78_10980 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LVJ78_06620 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LVJ78_03890 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_02770 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:usu00630] D LVJ78_10510 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D LVJ78_03890 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_09500 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LVJ78_10420 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D LVJ78_10695 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_03870 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D LVJ78_03880 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D LVJ78_03885 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D LVJ78_02045 catalase K03781 katE; catalase [EC:1.11.1.6] D LVJ78_00215 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D LVJ78_01510 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D LVJ78_10405 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_06430 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LVJ78_04250 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LVJ78_04290 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_04285 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D LVJ78_08380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LVJ78_01485 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D LVJ78_02775 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D LVJ78_03930 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LVJ78_03925 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:usu00640] D LVJ78_06585 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10250 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10255 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_09670 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06800 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D LVJ78_05840 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D LVJ78_08685 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LVJ78_10585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ78_10590 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ78_08030 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LVJ78_04395 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LVJ78_09465 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LVJ78_09460 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LVJ78_10420 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D LVJ78_10425 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D LVJ78_10245 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D LVJ78_10695 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LVJ78_10415 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D LVJ78_00290 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LVJ78_11095 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:usu00650] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_00075 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_03645 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D LVJ78_09515 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LVJ78_09510 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LVJ78_09525 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ78_09520 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ78_04395 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LVJ78_04400 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LVJ78_06270 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D LVJ78_06800 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D LVJ78_09005 zinc-dependent alcohol dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D LVJ78_02850 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LVJ78_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ78_10150 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:usu00660] D LVJ78_02850 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LVJ78_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ78_09465 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LVJ78_09460 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LVJ78_06525 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LVJ78_06545 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LVJ78_04960 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:usu00562] D LVJ78_01985 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ78_06845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ78_02425 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:usu00190] D LVJ78_12160 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D LVJ78_12155 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D LVJ78_12145 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D LVJ78_12140 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D LVJ78_12135 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D LVJ78_04940 SLBB domain-containing protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D LVJ78_12130 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D LVJ78_12120 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D LVJ78_12115 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D LVJ78_12110 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D LVJ78_12105 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D LVJ78_12100 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D LVJ78_12095 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D LVJ78_12080 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D LVJ78_12075 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D LVJ78_02625 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D LVJ78_09515 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LVJ78_09510 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LVJ78_09525 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ78_09520 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ78_10890 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LVJ78_10885 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LVJ78_10880 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LVJ78_03385 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D LVJ78_03390 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D LVJ78_03395 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D LVJ78_07095 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LVJ78_07090 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LVJ78_07085 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D LVJ78_01065 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LVJ78_01075 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LVJ78_01070 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LVJ78_01060 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LVJ78_01080 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LVJ78_01045 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LVJ78_01055 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LVJ78_01050 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LVJ78_05900 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D LVJ78_10090 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LVJ78_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ78_03910 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:usu00710] D LVJ78_11155 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LVJ78_00235 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_07525 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_11205 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LVJ78_03865 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D LVJ78_07495 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LVJ78_02425 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LVJ78_06380 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LVJ78_10635 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D LVJ78_10980 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LVJ78_08550 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:usu00720] D LVJ78_06620 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LVJ78_10980 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_10030 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D LVJ78_06200 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LVJ78_09515 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LVJ78_09510 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LVJ78_09525 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LVJ78_09520 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LVJ78_09460 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LVJ78_09465 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_06465 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LVJ78_10695 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LVJ78_08685 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LVJ78_10585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ78_10590 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ78_08030 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LVJ78_07740 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LVJ78_01710 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LVJ78_10295 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D LVJ78_09670 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D LVJ78_06585 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10250 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10255 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:usu00680] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_06790 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D LVJ78_03930 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LVJ78_03925 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D LVJ78_06430 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LVJ78_00215 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LVJ78_10980 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_11205 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LVJ78_06585 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10250 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10255 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_09670 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D LVJ78_06620 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LVJ78_00365 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ78_02550 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LVJ78_04440 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:usu00910] D LVJ78_07455 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LVJ78_07460 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LVJ78_07285 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07290 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07300 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_08865 nirK; copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D LVJ78_08870 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D LVJ78_10355 nosZ; TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D LVJ78_04450 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LVJ78_06175 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LVJ78_00995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LVJ78_07570 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_05655 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LVJ78_05660 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D LVJ78_00295 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D LVJ78_01790 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D LVJ78_11085 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D LVJ78_05165 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:usu00920] D LVJ78_06340 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_00395 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_06315 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D LVJ78_06310 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D LVJ78_06305 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D LVJ78_04040 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LVJ78_04030 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D LVJ78_04035 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LVJ78_04045 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D LVJ78_05830 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LVJ78_05850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LVJ78_05855 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D LVJ78_08250 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D LVJ78_04195 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D LVJ78_03195 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LVJ78_09550 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D LVJ78_06905 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LVJ78_02590 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D LVJ78_07025 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D LVJ78_10485 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:usu00061] D LVJ78_08685 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LVJ78_10585 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LVJ78_10590 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LVJ78_08030 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LVJ78_04845 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D LVJ78_04850 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10050 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10525 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_03830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ78_02125 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ78_03805 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ78_04915 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_10530 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_04930 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_10045 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_00725 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_03835 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_04925 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_01465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LVJ78_02310 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LVJ78_05110 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_05130 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:usu00071] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LVJ78_00075 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LVJ78_00085 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D LVJ78_05110 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_05130 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:usu00074] D LVJ78_09730 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LVJ78_04845 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D LVJ78_04850 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10050 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10525 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_03830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:usu00561] D LVJ78_08380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_08360 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D LVJ78_11095 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D LVJ78_06965 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D LVJ78_03800 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LVJ78_05715 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LVJ78_03080 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_05765 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_10190 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_06095 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LVJ78_06100 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:usu00564] D LVJ78_10675 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D LVJ78_05715 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LVJ78_03080 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_05765 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_10190 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_06095 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LVJ78_06100 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LVJ78_09225 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D LVJ78_11150 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LVJ78_01435 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LVJ78_08130 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LVJ78_02895 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LVJ78_07880 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LVJ78_07775 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D LVJ78_03320 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D LVJ78_08040 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LVJ78_08595 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LVJ78_06595 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:usu00565] D LVJ78_09225 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D LVJ78_09225 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D LVJ78_09225 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:usu00592] D LVJ78_09225 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids D LVJ78_08440 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:usu00230] D LVJ78_05870 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_05195 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LVJ78_07030 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LVJ78_00100 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D LVJ78_06870 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LVJ78_04990 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D LVJ78_03600 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D LVJ78_07305 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LVJ78_05740 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D LVJ78_07745 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D LVJ78_00935 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LVJ78_02345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ78_09605 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LVJ78_05950 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ78_08175 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D LVJ78_08990 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D LVJ78_10060 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LVJ78_07760 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LVJ78_06735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LVJ78_04005 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LVJ78_04145 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LVJ78_04240 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D LVJ78_09610 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LVJ78_06690 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LVJ78_06685 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LVJ78_11035 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LVJ78_06255 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D LVJ78_09620 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LVJ78_06360 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LVJ78_09020 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D LVJ78_11190 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D LVJ78_06560 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LVJ78_07415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LVJ78_06180 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D LVJ78_05830 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LVJ78_05850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LVJ78_01170 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LVJ78_01180 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:usu00240] D LVJ78_01635 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LVJ78_01610 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LVJ78_11850 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LVJ78_11855 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D LVJ78_07225 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D LVJ78_03140 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D LVJ78_01500 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D LVJ78_10815 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D LVJ78_03705 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LVJ78_01420 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LVJ78_06735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LVJ78_03210 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D LVJ78_06365 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LVJ78_06755 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LVJ78_00370 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D LVJ78_05950 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ78_08175 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D LVJ78_06890 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LVJ78_11035 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LVJ78_08050 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D LVJ78_06690 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LVJ78_06685 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LVJ78_07605 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LVJ78_05920 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LVJ78_07565 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LVJ78_03065 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:usu00250] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_08190 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LVJ78_03410 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LVJ78_07180 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LVJ78_06560 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LVJ78_00935 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LVJ78_11850 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LVJ78_11855 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D LVJ78_04395 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LVJ78_04400 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LVJ78_06270 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D LVJ78_05655 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LVJ78_05660 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D LVJ78_00995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LVJ78_07570 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D LVJ78_05440 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_01635 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LVJ78_01610 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LVJ78_12295 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LVJ78_07030 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:usu00260] D LVJ78_10395 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LVJ78_11610 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ78_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LVJ78_02380 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D LVJ78_08530 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D LVJ78_00265 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D LVJ78_06430 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LVJ78_00215 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D LVJ78_08380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LVJ78_00365 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ78_02550 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LVJ78_04440 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D LVJ78_03065 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D LVJ78_04250 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LVJ78_04290 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_04285 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D LVJ78_02895 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LVJ78_04325 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D LVJ78_04335 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D LVJ78_10230 aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D LVJ78_01820 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LVJ78_06600 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LVJ78_04280 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ78_12380 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D LVJ78_08035 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D LVJ78_04510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D LVJ78_10365 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:usu00270] D LVJ78_03195 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LVJ78_09550 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D LVJ78_00930 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LVJ78_10725 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LVJ78_07265 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ78_08265 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LVJ78_08990 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D LVJ78_06850 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LVJ78_00585 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_10470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_00805 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LVJ78_10395 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LVJ78_11610 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ78_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LVJ78_06905 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LVJ78_02590 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D LVJ78_02575 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D LVJ78_07025 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D LVJ78_07580 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LVJ78_06575 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LVJ78_06090 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_00290 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LVJ78_04280 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ78_12380 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D LVJ78_09530 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LVJ78_01820 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LVJ78_03990 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D LVJ78_02550 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:usu00280] D LVJ78_07580 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:usu00290] D LVJ78_06600 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LVJ78_06525 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LVJ78_06545 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LVJ78_04960 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D LVJ78_02850 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LVJ78_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ78_02865 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D LVJ78_06920 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LVJ78_07580 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LVJ78_02770 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:usu00300] D LVJ78_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LVJ78_10395 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LVJ78_11610 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ78_04020 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LVJ78_10755 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LVJ78_10735 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D LVJ78_08375 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LVJ78_07245 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D LVJ78_07910 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LVJ78_09565 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LVJ78_01115 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LVJ78_11725 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LVJ78_11720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:usu00310] D LVJ78_09490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_04280 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ78_12380 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D LVJ78_10235 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D LVJ78_04400 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:usu00220] D LVJ78_07905 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D LVJ78_03410 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LVJ78_07180 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LVJ78_01170 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LVJ78_01180 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_01635 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LVJ78_01610 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LVJ78_00995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LVJ78_07570 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_10825 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D LVJ78_01320 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D LVJ78_05070 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D LVJ78_02650 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D LVJ78_08375 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LVJ78_11950 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:usu00330] D LVJ78_01765 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D LVJ78_08195 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D LVJ78_02440 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D LVJ78_05675 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D LVJ78_05025 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D LVJ78_07265 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D LVJ78_10235 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_09845 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LVJ78_03965 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D LVJ78_12260 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LVJ78_05440 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LVJ78_12065 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LVJ78_03290 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D LVJ78_04190 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:usu00340] D LVJ78_03850 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D LVJ78_06565 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D LVJ78_09830 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D LVJ78_09840 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D LVJ78_09870 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D LVJ78_09875 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D LVJ78_09860 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D LVJ78_09915 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_03840 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:usu00350] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_01785 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D LVJ78_02450 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D LVJ78_04400 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LVJ78_07330 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00360 Phenylalanine metabolism [PATH:usu00360] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LVJ78_07330 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D LVJ78_07920 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LVJ78_09845 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:usu00380] D LVJ78_03675 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LVJ78_09490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_09845 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LVJ78_02045 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:usu00400] D LVJ78_00455 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LVJ78_02985 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D LVJ78_08255 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D LVJ78_10765 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D LVJ78_02990 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D LVJ78_06760 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D LVJ78_09595 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D LVJ78_06515 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LVJ78_09060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D LVJ78_09055 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D LVJ78_04505 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D LVJ78_01275 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D LVJ78_08035 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D LVJ78_04510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D LVJ78_10365 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D LVJ78_08830 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D LVJ78_02705 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:usu00410] D LVJ78_11050 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D LVJ78_04395 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_06085 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:usu00430] D LVJ78_00225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LVJ78_04045 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D LVJ78_00995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LVJ78_09670 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D LVJ78_06585 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10250 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LVJ78_10255 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D LVJ78_07645 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:usu00450] D LVJ78_02590 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D LVJ78_00930 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LVJ78_08970 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LVJ78_05830 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LVJ78_05850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LVJ78_00830 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:usu00460] D LVJ78_00225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LVJ78_08190 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LVJ78_06430 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:usu00470] D LVJ78_07915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LVJ78_11685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ78_04280 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D LVJ78_12380 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D LVJ78_04375 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LVJ78_11705 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ78_09565 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LVJ78_01115 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LVJ78_07920 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:usu00480] D LVJ78_00225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LVJ78_07830 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D LVJ78_07820 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D LVJ78_07825 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D LVJ78_06575 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LVJ78_06090 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LVJ78_04350 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LVJ78_02035 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LVJ78_04435 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LVJ78_06465 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LVJ78_00220 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LVJ78_02785 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ78_02480 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D LVJ78_06140 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D LVJ78_05025 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D LVJ78_07265 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:usu00540] D LVJ78_01470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LVJ78_00230 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LVJ78_01460 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D LVJ78_05470 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LVJ78_01490 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D LVJ78_07435 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LVJ78_10630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LVJ78_11815 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LVJ78_10625 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LVJ78_07425 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D LVJ78_00695 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D LVJ78_02115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ78_10720 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ78_09675 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D LVJ78_10130 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LVJ78_03710 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LVJ78_03085 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D LVJ78_01730 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LVJ78_03715 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D LVJ78_00250 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LVJ78_07595 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D LVJ78_01580 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:usu00541] D LVJ78_02740 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LVJ78_11820 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LVJ78_11805 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LVJ78_03100 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LVJ78_03105 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ78_03095 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LVJ78_03480 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D LVJ78_05005 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LVJ78_12300 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LVJ78_01840 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D LVJ78_01885 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:usu00550] D LVJ78_00030 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LVJ78_03945 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ78_11690 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LVJ78_11705 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ78_11725 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LVJ78_11685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ78_11720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LVJ78_01430 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LVJ78_03450 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LVJ78_11715 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LVJ78_11695 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LVJ78_10760 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LVJ78_03020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LVJ78_09395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D LVJ78_11730 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LVJ78_06605 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LVJ78_00615 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:usu00552] D LVJ78_03450 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LVJ78_01840 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:usu00543] D LVJ78_01695 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D LVJ78_03195 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:usu00730] D LVJ78_11520 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D LVJ78_05825 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LVJ78_08605 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LVJ78_11970 FAD-binding oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D LVJ78_01815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LVJ78_11955 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D LVJ78_03200 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LVJ78_02145 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D LVJ78_03315 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D LVJ78_12355 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LVJ78_07415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:usu00740] D LVJ78_04545 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LVJ78_07715 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LVJ78_01890 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LVJ78_11025 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D LVJ78_06345 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D LVJ78_04685 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LVJ78_01785 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D LVJ78_06440 nitroreductase family protein K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D LVJ78_03200 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LVJ78_05870 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LVJ78_09085 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:usu00750] D LVJ78_05820 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D LVJ78_02550 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LVJ78_00945 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D LVJ78_09735 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D LVJ78_08530 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:usu00760] D LVJ78_04410 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LVJ78_05950 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LVJ78_01795 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LVJ78_06210 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D LVJ78_12410 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D LVJ78_00245 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D LVJ78_09665 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D LVJ78_11625 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D LVJ78_08370 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D LVJ78_05995 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D LVJ78_08575 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D LVJ78_08570 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D LVJ78_04400 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LVJ78_06270 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:usu00770] D LVJ78_02850 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LVJ78_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LVJ78_02865 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D LVJ78_06920 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LVJ78_06075 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D LVJ78_06085 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D LVJ78_01735 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33] D LVJ78_09165 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LVJ78_10845 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LVJ78_11650 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LVJ78_09730 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LVJ78_07155 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D LVJ78_07580 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LVJ78_11050 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:usu00780] D LVJ78_00620 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D LVJ78_07470 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D LVJ78_04915 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_10530 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_04930 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_10045 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_00725 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_03835 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_04925 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_01465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LVJ78_02310 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LVJ78_00625 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D LVJ78_07465 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D LVJ78_05865 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D LVJ78_03335 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D LVJ78_10795 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D LVJ78_01735 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33] C 00785 Lipoic acid metabolism [PATH:usu00785] D LVJ78_06410 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D LVJ78_06405 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_05150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LVJ78_05155 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LVJ78_09495 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D LVJ78_09490 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LVJ78_04250 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LVJ78_04290 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ78_04285 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:usu00790] D LVJ78_02585 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D LVJ78_05770 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D LVJ78_05720 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D LVJ78_06065 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D LVJ78_08210 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D LVJ78_03430 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LVJ78_07045 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LVJ78_04545 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LVJ78_07715 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LVJ78_02745 bifunctional anthranilate synthase component I family protein/aminotransferase class IV K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D LVJ78_09930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LVJ78_09925 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LVJ78_09940 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LVJ78_01925 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D LVJ78_00790 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LVJ78_01680 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LVJ78_05235 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LVJ78_06855 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D LVJ78_05245 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D LVJ78_05240 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:usu00670] D LVJ78_03430 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LVJ78_07740 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LVJ78_01710 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LVJ78_06430 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LVJ78_06870 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LVJ78_02345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ78_11495 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LVJ78_04290 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LVJ78_07565 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LVJ78_10295 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D LVJ78_01400 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:usu00860] D LVJ78_12340 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ78_05815 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D LVJ78_11200 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D LVJ78_08665 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LVJ78_02675 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D LVJ78_02680 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D LVJ78_09785 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D LVJ78_08415 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D LVJ78_03295 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D LVJ78_11185 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D LVJ78_02825 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D LVJ78_02685 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D LVJ78_05485 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D LVJ78_08585 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D LVJ78_08950 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D LVJ78_08955 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:usu00130] D LVJ78_04090 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D LVJ78_04095 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D LVJ78_04630 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D LVJ78_09085 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LVJ78_08800 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D LVJ78_11935 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D LVJ78_08780 FAD-dependent oxidoreductase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D LVJ78_06235 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LVJ78_05895 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D LVJ78_05915 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D LVJ78_10835 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D LVJ78_02055 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:usu00900] D LVJ78_01815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LVJ78_01440 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D LVJ78_07505 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D LVJ78_05180 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D LVJ78_07500 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D LVJ78_06715 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D LVJ78_04730 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_09085 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LVJ78_00055 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D LVJ78_02245 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D LVJ78_01430 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LVJ78_12350 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:usu00906] D LVJ78_05400 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:usu00907] D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D LVJ78_03865 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:usu00523] D LVJ78_03100 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LVJ78_03105 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ78_03095 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LVJ78_03480 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LVJ78_03105 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:usu00332] D LVJ78_12065 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LVJ78_03290 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:usu00261] D LVJ78_05830 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LVJ78_05850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LVJ78_10395 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LVJ78_11610 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LVJ78_04020 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LVJ78_10755 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:usu00521] D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D LVJ78_09040 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LVJ78_01985 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ78_06845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LVJ78_03100 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LVJ78_03105 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LVJ78_03095 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LVJ78_03480 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D LVJ78_02795 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:usu00525] D LVJ78_03100 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LVJ78_03105 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:usu00401] D LVJ78_02705 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D LVJ78_06515 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LVJ78_09060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D LVJ78_03830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ78_00725 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_03835 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_04925 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_02310 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D LVJ78_04845 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D LVJ78_04850 acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10050 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LVJ78_10525 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:usu00999] D LVJ78_10725 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LVJ78_10765 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:usu00362] D LVJ78_07350 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D LVJ78_07355 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D LVJ78_07360 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D LVJ78_07365 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D LVJ78_07345 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D LVJ78_07335 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D LVJ78_07340 catC; muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D LVJ78_07390 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D LVJ78_07375 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D LVJ78_07380 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LVJ78_07385 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D LVJ78_03615 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D LVJ78_03620 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D LVJ78_03625 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D LVJ78_03630 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D LVJ78_03635 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D LVJ78_03640 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D LVJ78_03670 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D LVJ78_03680 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D LVJ78_03650 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D LVJ78_03645 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D LVJ78_03675 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LVJ78_03660 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LVJ78_03655 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LVJ78_05390 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D LVJ78_00075 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:usu00627] D LVJ78_09845 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LVJ78_07325 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LVJ78_09085 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:usu00364] D LVJ78_07350 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D LVJ78_07355 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D LVJ78_07360 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D LVJ78_07365 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D LVJ78_07345 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D LVJ78_07335 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:usu00625] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LVJ78_02870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LVJ78_05270 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:usu00361] D LVJ78_03615 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D LVJ78_03620 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D LVJ78_03625 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D LVJ78_03630 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D LVJ78_03635 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D LVJ78_03640 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D LVJ78_07345 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D LVJ78_07335 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D LVJ78_03670 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00623 Toluene degradation [PATH:usu00623] D LVJ78_03615 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D LVJ78_03620 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D LVJ78_03625 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D LVJ78_03630 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D LVJ78_03635 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D LVJ78_03640 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D LVJ78_07330 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D LVJ78_07325 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LVJ78_07345 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D LVJ78_07335 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:usu00622] D LVJ78_07330 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D LVJ78_07325 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LVJ78_07350 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D LVJ78_07355 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D LVJ78_07360 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D LVJ78_07365 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D LVJ78_03670 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D LVJ78_03675 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LVJ78_03660 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LVJ78_03655 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LVJ78_03680 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D LVJ78_03650 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D LVJ78_03645 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D LVJ78_00070 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:usu00643] D LVJ78_09845 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LVJ78_03670 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00791 Atrazine degradation D LVJ78_01170 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LVJ78_01180 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:usu00621] D LVJ78_03660 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LVJ78_03655 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LVJ78_03680 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D LVJ78_03650 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D LVJ78_03645 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:usu00626] D LVJ78_07135 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LVJ78_07115 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LVJ78_02475 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation D LVJ78_01245 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:usu03020] D LVJ78_11400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LVJ78_11395 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LVJ78_11230 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LVJ78_09615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:usu03010] D LVJ78_06750 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LVJ78_01410 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LVJ78_11330 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LVJ78_11235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LVJ78_11275 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LVJ78_05780 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LVJ78_11385 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LVJ78_11290 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LVJ78_10650 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LVJ78_11370 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LVJ78_11240 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LVJ78_11390 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LVJ78_11245 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LVJ78_11295 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LVJ78_02490 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LVJ78_02975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LVJ78_11315 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LVJ78_05790 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LVJ78_11340 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LVJ78_09230 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LVJ78_09625 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LVJ78_11415 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LVJ78_11345 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LVJ78_11360 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LVJ78_11355 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LVJ78_11300 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LVJ78_11285 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LVJ78_11405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LVJ78_05795 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LVJ78_11410 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LVJ78_11420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LVJ78_10655 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LVJ78_11310 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LVJ78_11265 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LVJ78_11325 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LVJ78_11225 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LVJ78_11280 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LVJ78_02960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LVJ78_04800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LVJ78_02255 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LVJ78_11335 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LVJ78_11350 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LVJ78_11305 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LVJ78_05200 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D LVJ78_02260 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LVJ78_02225 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LVJ78_11320 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LVJ78_11270 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LVJ78_04060 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ78_11580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ78_03790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LVJ78_02230 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LVJ78_02165 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LVJ78_04795 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LVJ78_04055 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LVJ78_11250 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LVJ78_02405 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:usu00970] D LVJ78_02395 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_08650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_11125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_12235 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_11760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_03270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_06260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_01720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_08365 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ78_10540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ78_03155 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LVJ78_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LVJ78_07795 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LVJ78_05185 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ78_05190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ78_03265 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_04445 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_06265 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_07780 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_07785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_07790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_11450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_01725 tRNA-His K14226 tRNA-His; tRNA His D LVJ78_02390 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_08655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_11130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_12240 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_05730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_05735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_07800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_04535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_00275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ78_00675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ78_12210 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ78_09655 tRNA-Ile K14230 tRNA-Met; tRNA Met D LVJ78_11755 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ78_11630 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ78_03770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_04830 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_01715 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_06285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_06400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_06390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_11445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ78_07270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ78_11435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LVJ78_11455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LVJ78_04780 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_03150 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_04550 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_12340 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ78_09370 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LVJ78_09340 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LVJ78_09375 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LVJ78_06245 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LVJ78_06940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LVJ78_09215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LVJ78_03175 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LVJ78_03185 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LVJ78_04785 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LVJ78_05505 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LVJ78_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LVJ78_00830 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LVJ78_11495 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LVJ78_01260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ78_10085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LVJ78_04690 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LVJ78_00160 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LVJ78_07805 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ78_11080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ78_06710 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LVJ78_04805 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LVJ78_04815 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LVJ78_10260 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ78_07250 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:usu03060] D LVJ78_11260 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LVJ78_11430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LVJ78_02430 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LVJ78_09435 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ78_09440 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ78_09430 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ78_02150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D LVJ78_02955 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LVJ78_11535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ78_11145 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LVJ78_00860 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LVJ78_09820 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LVJ78_09815 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D LVJ78_09810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D LVJ78_06130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LVJ78_04725 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:usu04122] D LVJ78_08605 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LVJ78_07215 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LVJ78_05135 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LVJ78_05235 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LVJ78_00790 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LVJ78_05230 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D LVJ78_01675 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D LVJ78_01680 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LVJ78_06855 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D LVJ78_11965 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:usu03018] D LVJ78_05940 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LVJ78_01530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LVJ78_02455 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D LVJ78_07235 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LVJ78_05725 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LVJ78_00340 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LVJ78_06250 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D LVJ78_02015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LVJ78_10905 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LVJ78_06695 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ78_10090 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LVJ78_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ78_03910 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ78_05760 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:usu03030] D LVJ78_03275 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_07510 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_09145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_00705 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LVJ78_05805 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LVJ78_07610 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ78_09330 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ78_04360 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LVJ78_02175 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LVJ78_05545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LVJ78_09645 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_09455 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LVJ78_01495 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:usu03410] D LVJ78_07485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LVJ78_08065 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_09010 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D LVJ78_06195 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LVJ78_04275 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LVJ78_10865 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_12285 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_02070 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ78_10810 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_00610 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:usu03420] D LVJ78_05685 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LVJ78_08160 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D LVJ78_04210 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LVJ78_07770 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D LVJ78_12405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:usu03430] D LVJ78_00020 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LVJ78_08105 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D LVJ78_12405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LVJ78_07440 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LVJ78_00050 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LVJ78_00610 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_00705 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LVJ78_02175 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LVJ78_05805 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LVJ78_09330 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ78_07610 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ78_03275 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_07510 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_09145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_04360 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:usu03440] D LVJ78_00610 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_09740 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LVJ78_06785 recR; recombination mediator RecR K06187 recR; recombination protein RecR D LVJ78_06170 recA; recombinase RecA K03553 recA; recombination protein RecA D LVJ78_07195 recA; recombinase RecA K03553 recA; recombination protein RecA D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_00645 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LVJ78_09070 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LVJ78_00815 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LVJ78_04670 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LVJ78_06015 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D LVJ78_02715 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D LVJ78_05445 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LVJ78_00705 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LVJ78_02175 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LVJ78_05805 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LVJ78_09330 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ78_07610 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ78_03275 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_07510 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_09145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_04360 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LVJ78_11585 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LVJ78_05785 priB; primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:usu02010] D LVJ78_06340 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_00395 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_06315 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D LVJ78_06310 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D LVJ78_06305 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D LVJ78_04040 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LVJ78_04030 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D LVJ78_04035 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LVJ78_05075 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LVJ78_05085 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D LVJ78_05090 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D LVJ78_03230 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LVJ78_03225 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LVJ78_03220 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LVJ78_12315 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D LVJ78_12390 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D LVJ78_12385 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D LVJ78_05945 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_06945 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_09235 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_03970 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D LVJ78_03975 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D LVJ78_03980 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D LVJ78_00415 ATP-binding cassette domain-containing protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D LVJ78_00505 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ78_06675 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ78_00510 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LVJ78_00515 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LVJ78_00500 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D LVJ78_00520 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LVJ78_06320 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D LVJ78_06325 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D LVJ78_06330 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D LVJ78_06335 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D LVJ78_09985 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D LVJ78_09980 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D LVJ78_09975 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D LVJ78_09970 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LVJ78_09905 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LVJ78_09895 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D LVJ78_09900 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LVJ78_09890 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LVJ78_08080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ78_08075 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D LVJ78_08070 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LVJ78_03375 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LVJ78_03370 ABC transporter permease K02072 metI; D-methionine transport system permease protein D LVJ78_03365 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LVJ78_01205 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D LVJ78_01200 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D LVJ78_01195 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D LVJ78_01190 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D LVJ78_01185 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D LVJ78_07555 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ78_01575 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D LVJ78_01570 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D LVJ78_01565 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D LVJ78_01560 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ78_02300 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LVJ78_02295 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D LVJ78_02290 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D LVJ78_02285 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D LVJ78_02280 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D LVJ78_02315 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D LVJ78_07015 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D LVJ78_07005 ABC transporter permease K13895 yejE; microcin C transport system permease protein D LVJ78_07000 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D LVJ78_09130 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D LVJ78_09135 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D LVJ78_11775 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D LVJ78_11770 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D LVJ78_11765 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D LVJ78_07130 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D LVJ78_07125 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LVJ78_04345 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LVJ78_04340 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LVJ78_10610 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D LVJ78_10340 ABC transporter permease K19341 nosY; Cu-processing system permease protein D LVJ78_10345 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D LVJ78_00045 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ78_00040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D LVJ78_08525 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D LVJ78_00650 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D LVJ78_05210 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D LVJ78_07100 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LVJ78_07105 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LVJ78_09750 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D LVJ78_09110 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D LVJ78_08705 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D LVJ78_09240 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:usu02060] D LVJ78_10075 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LVJ78_10070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D LVJ78_10065 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ78_04100 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:usu03070] D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_09435 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ78_09440 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ78_11430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LVJ78_02430 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LVJ78_11260 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LVJ78_09430 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ78_02150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D LVJ78_02955 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LVJ78_00860 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LVJ78_11535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ78_11145 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LVJ78_09820 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LVJ78_09815 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D LVJ78_09810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:usu02020] D LVJ78_12055 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LVJ78_12060 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D LVJ78_09985 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D LVJ78_07480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D LVJ78_09685 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D LVJ78_09680 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D LVJ78_10925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D LVJ78_10920 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D LVJ78_10915 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D LVJ78_02170 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LVJ78_10940 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D LVJ78_02595 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D LVJ78_02600 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D LVJ78_02605 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D LVJ78_02610 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D LVJ78_02615 citX; citrate lyase holo-[acyl-carrier protein] synthase K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52] D LVJ78_05700 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D LVJ78_07175 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D LVJ78_12215 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D LVJ78_05225 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D LVJ78_05220 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D LVJ78_07285 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07290 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07300 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07295 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D LVJ78_10400 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D LVJ78_05520 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D LVJ78_01370 glnK; P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D LVJ78_04995 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_11510 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ78_11515 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_01540 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D LVJ78_01545 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D LVJ78_10605 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D LVJ78_00975 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ78_09890 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LVJ78_09895 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D LVJ78_09900 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LVJ78_09905 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LVJ78_10890 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LVJ78_10885 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LVJ78_10880 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LVJ78_03385 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D LVJ78_03390 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D LVJ78_03395 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D LVJ78_07095 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LVJ78_07090 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LVJ78_07085 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_01835 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ78_11780 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ78_01830 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LVJ78_10995 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LVJ78_01825 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:usu04148] D LVJ78_05025 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D LVJ78_10890 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:usu02024] D LVJ78_00805 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LVJ78_06695 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ78_06515 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LVJ78_09060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D LVJ78_00455 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LVJ78_09685 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D LVJ78_09680 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D LVJ78_04390 IclR family transcriptional regulator K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D LVJ78_05110 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_05130 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_07895 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D LVJ78_04545 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LVJ78_01890 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LVJ78_02220 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D LVJ78_07555 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ78_01575 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D LVJ78_01570 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D LVJ78_01565 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D LVJ78_01560 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ78_02150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D LVJ78_11430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LVJ78_02430 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LVJ78_11260 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LVJ78_09430 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ78_02955 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LVJ78_00860 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LVJ78_11535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ78_11145 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:usu02030] D LVJ78_06320 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D LVJ78_02300 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein C 02040 Flagellar assembly [PATH:usu02040] D LVJ78_08080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ78_09650 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LVJ78_10605 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:usu01501] D LVJ78_02755 porB; trimeric porin PorB K18133 K18133; major outer membrane protein P.IB D LVJ78_02265 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LVJ78_07475 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LVJ78_07555 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ78_01575 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D LVJ78_01570 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D LVJ78_01565 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D LVJ78_01560 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ78_02210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ78_02215 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D LVJ78_02220 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_03020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LVJ78_09395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D LVJ78_11730 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:usu01502] D LVJ78_11685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ78_07915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LVJ78_11720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LVJ78_11715 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LVJ78_11695 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:usu01503] D LVJ78_09675 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D LVJ78_04365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LVJ78_07480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D LVJ78_09695 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LVJ78_02210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ78_02215 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_01470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:usu01000] C 01001 Protein kinases [BR:usu01001] D LVJ78_01825 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D LVJ78_12055 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LVJ78_09685 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D LVJ78_03895 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ78_09790 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ78_05225 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D LVJ78_07175 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D LVJ78_11510 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ78_01540 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:usu01009] D LVJ78_04440 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:usu01002] D LVJ78_04725 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D LVJ78_11645 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LVJ78_04145 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LVJ78_07030 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LVJ78_05655 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LVJ78_12295 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LVJ78_03720 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D LVJ78_01475 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D LVJ78_02035 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LVJ78_00670 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D LVJ78_00850 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D LVJ78_00855 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D LVJ78_04350 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LVJ78_07910 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LVJ78_07445 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D LVJ78_01270 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LVJ78_07735 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LVJ78_12350 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D LVJ78_03285 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LVJ78_01445 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D LVJ78_07480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D LVJ78_10055 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D LVJ78_06605 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LVJ78_09780 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LVJ78_00615 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D LVJ78_06825 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LVJ78_06420 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D LVJ78_06130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LVJ78_04190 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LVJ78_05045 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D LVJ78_01505 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D LVJ78_09445 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D LVJ78_00225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LVJ78_07845 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D LVJ78_01345 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D LVJ78_01550 tldD; metalloprotease TldD K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:usu01003] D LVJ78_04580 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D LVJ78_10760 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LVJ78_03020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LVJ78_01695 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:usu01005] D LVJ78_01470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LVJ78_01490 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D LVJ78_00230 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LVJ78_01460 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D LVJ78_05470 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LVJ78_07435 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LVJ78_02115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ78_10720 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LVJ78_00695 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D LVJ78_09675 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D LVJ78_11815 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LVJ78_07425 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D LVJ78_10625 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LVJ78_10630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LVJ78_03710 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LVJ78_01730 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LVJ78_00250 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LVJ78_04140 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D LVJ78_07595 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D LVJ78_01580 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D LVJ78_10130 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LVJ78_03085 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D LVJ78_03715 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:usu01011] D LVJ78_00030 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LVJ78_03945 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LVJ78_11690 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LVJ78_11705 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LVJ78_11725 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LVJ78_11685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LVJ78_07915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LVJ78_04375 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LVJ78_09445 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D LVJ78_11715 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LVJ78_11695 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LVJ78_03450 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LVJ78_00785 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LVJ78_03020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LVJ78_09395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D LVJ78_11730 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LVJ78_06605 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LVJ78_00615 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D LVJ78_09780 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LVJ78_10760 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LVJ78_07445 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D LVJ78_09960 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D LVJ78_00025 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D LVJ78_05800 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D LVJ78_07710 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D LVJ78_07600 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D LVJ78_00640 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D LVJ78_04365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LVJ78_02725 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:usu01004] D LVJ78_03830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LVJ78_02125 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ78_03805 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LVJ78_04915 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_10530 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D LVJ78_04930 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_10045 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LVJ78_00725 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_03835 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_04925 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LVJ78_01465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LVJ78_02310 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LVJ78_08440 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D LVJ78_00485 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D LVJ78_05110 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_05130 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_03800 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LVJ78_05715 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LVJ78_03080 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_05765 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LVJ78_10190 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:usu01006] D LVJ78_00055 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D LVJ78_02245 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D LVJ78_01430 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LVJ78_05400 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D LVJ78_05625 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LVJ78_10835 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D LVJ78_04095 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:usu01007] D LVJ78_12340 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ78_06245 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LVJ78_10850 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LVJ78_10260 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ78_07250 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LVJ78_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LVJ78_07805 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ78_00830 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LVJ78_04690 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LVJ78_01260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ78_10085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LVJ78_00160 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LVJ78_09215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LVJ78_06710 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LVJ78_03175 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LVJ78_03185 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LVJ78_05505 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LVJ78_11080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ78_04785 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LVJ78_06940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LVJ78_04805 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LVJ78_04815 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LVJ78_06665 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D LVJ78_08495 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LVJ78_07245 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D LVJ78_09920 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LVJ78_07465 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D LVJ78_08375 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LVJ78_04395 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LVJ78_10235 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D LVJ78_05865 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D LVJ78_11200 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D LVJ78_07580 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LVJ78_02745 bifunctional anthranilate synthase component I family protein/aminotransferase class IV K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D LVJ78_02550 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:usu00194] D LVJ78_01080 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LVJ78_01075 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LVJ78_01070 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LVJ78_01065 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LVJ78_01060 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LVJ78_01055 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LVJ78_01050 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LVJ78_01045 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LVJ78_01040 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:usu03000] D LVJ78_00585 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_10470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_00535 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D LVJ78_00865 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D LVJ78_12020 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D LVJ78_06860 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D LVJ78_03305 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D LVJ78_07320 LysR substrate-binding domain-containing protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D LVJ78_08510 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D LVJ78_04650 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LVJ78_02205 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D LVJ78_04295 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ78_07925 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ78_02355 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D LVJ78_07200 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D LVJ78_10745 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LVJ78_07895 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D LVJ78_04390 IclR family transcriptional regulator K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D LVJ78_03300 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LVJ78_08600 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D LVJ78_02670 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D LVJ78_09285 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LVJ78_02800 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D LVJ78_02340 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ78_05295 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LVJ78_01025 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D LVJ78_08390 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D LVJ78_07280 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D LVJ78_05350 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator D LVJ78_05440 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LVJ78_10360 NosR/NirI family protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D LVJ78_07110 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D LVJ78_04480 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LVJ78_01035 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LVJ78_08005 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D LVJ78_05055 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D LVJ78_12250 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LVJ78_01900 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D LVJ78_11745 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:usu03021] D LVJ78_11230 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LVJ78_11400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LVJ78_11395 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LVJ78_09615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LVJ78_09650 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LVJ78_08675 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D LVJ78_02555 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D LVJ78_10605 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D LVJ78_02535 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LVJ78_11030 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D LVJ78_11425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LVJ78_10875 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D LVJ78_10870 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D LVJ78_08670 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D LVJ78_12250 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LVJ78_08235 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LVJ78_04050 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D LVJ78_06250 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:usu03019] D LVJ78_01530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ78_03205 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LVJ78_06045 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ78_05725 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LVJ78_00825 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LVJ78_07235 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LVJ78_00340 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LVJ78_02455 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D LVJ78_06250 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D LVJ78_02015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LVJ78_10905 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LVJ78_06695 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ78_10090 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LVJ78_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ78_03910 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LVJ78_05760 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D LVJ78_05940 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LVJ78_03725 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D LVJ78_04110 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D LVJ78_12200 DUF3418 domain-containing protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:usu03011] D LVJ78_06750 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LVJ78_01410 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LVJ78_11330 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LVJ78_11235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LVJ78_11275 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LVJ78_05780 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LVJ78_11385 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LVJ78_11290 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LVJ78_10650 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LVJ78_11370 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LVJ78_11240 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LVJ78_11390 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LVJ78_11245 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LVJ78_11295 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LVJ78_02490 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LVJ78_02975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LVJ78_11315 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LVJ78_05790 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LVJ78_11340 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LVJ78_09230 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LVJ78_09625 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LVJ78_11415 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LVJ78_11345 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LVJ78_11360 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LVJ78_11355 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LVJ78_11300 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LVJ78_11285 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LVJ78_05795 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LVJ78_11410 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LVJ78_11420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LVJ78_11405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LVJ78_10655 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LVJ78_11310 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LVJ78_11265 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LVJ78_11325 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LVJ78_11225 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LVJ78_11280 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LVJ78_02960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LVJ78_04800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LVJ78_02255 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LVJ78_11335 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LVJ78_11350 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LVJ78_11305 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LVJ78_02260 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LVJ78_02225 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LVJ78_11320 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LVJ78_11270 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LVJ78_04060 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ78_11580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LVJ78_03790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LVJ78_02230 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LVJ78_02165 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LVJ78_04795 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LVJ78_04055 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LVJ78_11250 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LVJ78_05200 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D LVJ78_02405 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:usu03009] D LVJ78_06045 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ78_00825 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LVJ78_06050 era; GTPase Era K03595 era; GTPase D LVJ78_11565 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D LVJ78_12250 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LVJ78_02535 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LVJ78_11030 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D LVJ78_11425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LVJ78_07520 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D LVJ78_03250 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LVJ78_06880 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LVJ78_11500 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LVJ78_11465 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LVJ78_01990 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D LVJ78_11885 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LVJ78_11740 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LVJ78_03775 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LVJ78_10140 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LVJ78_01770 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D LVJ78_08920 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LVJ78_08220 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D LVJ78_01805 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LVJ78_06970 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D LVJ78_08400 class I SAM-dependent methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D LVJ78_09190 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D LVJ78_06730 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D LVJ78_00405 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D LVJ78_04130 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LVJ78_01525 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D LVJ78_08995 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LVJ78_06450 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D LVJ78_09185 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D LVJ78_10860 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LVJ78_02970 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D LVJ78_10595 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LVJ78_09410 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D LVJ78_01530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D LVJ78_03205 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LVJ78_05060 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LVJ78_12355 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LVJ78_06700 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D LVJ78_04115 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D LVJ78_07875 hflX; GTPase HflX K03665 hflX; GTPase D LVJ78_12360 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LVJ78_09620 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LVJ78_02510 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D LVJ78_02540 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D LVJ78_00425 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D LVJ78_01800 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D LVJ78_10320 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D LVJ78_08225 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D LVJ78_01355 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D LVJ78_10600 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D LVJ78_10280 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D LVJ78_03785 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:usu03016] D LVJ78_06205 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LVJ78_12340 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ78_11080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LVJ78_04690 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LVJ78_10085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LVJ78_00830 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LVJ78_06245 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LVJ78_07805 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ78_00160 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LVJ78_09215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LVJ78_06940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LVJ78_04785 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LVJ78_05505 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LVJ78_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LVJ78_01260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LVJ78_06710 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LVJ78_04805 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LVJ78_04815 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LVJ78_10260 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ78_07250 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LVJ78_01330 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LVJ78_09825 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LVJ78_06470 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LVJ78_00240 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D LVJ78_04500 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LVJ78_02495 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LVJ78_08605 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LVJ78_12360 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LVJ78_05625 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LVJ78_12430 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LVJ78_00060 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LVJ78_02160 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LVJ78_10390 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D LVJ78_00715 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1] D LVJ78_07410 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D LVJ78_03175 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LVJ78_03185 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LVJ78_10850 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LVJ78_08775 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D LVJ78_02330 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LVJ78_03515 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D LVJ78_11215 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D LVJ78_06840 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D LVJ78_06770 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D LVJ78_02965 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LVJ78_00635 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LVJ78_05880 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D LVJ78_12345 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D LVJ78_00405 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D LVJ78_05135 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LVJ78_07185 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D LVJ78_07215 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LVJ78_08625 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D LVJ78_08455 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D LVJ78_10580 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D LVJ78_09940 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LVJ78_09930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LVJ78_09925 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LVJ78_01925 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D LVJ78_08805 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D LVJ78_04775 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D LVJ78_08680 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LVJ78_10855 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LVJ78_09945 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LVJ78_04370 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LVJ78_04425 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D LVJ78_05725 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LVJ78_02455 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:usu03012] D LVJ78_02530 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LVJ78_04790 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LVJ78_08945 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LVJ78_01415 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D LVJ78_11375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_11440 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_11380 fusA; elongation factor G K02355 fusA; elongation factor G D LVJ78_07150 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LVJ78_01425 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D LVJ78_11525 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LVJ78_09260 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LVJ78_11255 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LVJ78_05495 efp; elongation factor P K02356 efp; elongation factor P D LVJ78_00960 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D LVJ78_09415 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:usu03110] D LVJ78_04185 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D LVJ78_08975 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D LVJ78_09775 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D LVJ78_02015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LVJ78_05395 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D LVJ78_10905 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LVJ78_11840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D LVJ78_08180 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D LVJ78_08630 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D LVJ78_02270 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D LVJ78_02010 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D LVJ78_08690 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D LVJ78_10910 groES; co-chaperone GroES K04078 groES; chaperonin GroES D LVJ78_07480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D LVJ78_01045 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LVJ78_11535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ78_00095 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D LVJ78_06115 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D LVJ78_06985 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LVJ78_09080 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LVJ78_06120 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D LVJ78_05020 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D LVJ78_00205 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D LVJ78_06820 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D LVJ78_00770 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D LVJ78_06995 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D LVJ78_09015 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2 D LVJ78_11540 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D LVJ78_06885 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D LVJ78_09695 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LVJ78_01335 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D LVJ78_02695 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D LVJ78_04385 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:usu04131] D LVJ78_06735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LVJ78_00410 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D LVJ78_00235 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_07525 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_00365 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ78_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:usu03032] D LVJ78_09455 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LVJ78_00585 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_10470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_06425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ78_04820 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ78_06745 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ78_02170 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LVJ78_05545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LVJ78_09645 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_00705 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LVJ78_02175 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LVJ78_04360 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LVJ78_09330 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ78_07610 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ78_03275 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_07510 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_09145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_05805 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LVJ78_01495 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LVJ78_11065 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D LVJ78_07170 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LVJ78_02180 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LVJ78_01535 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LVJ78_05935 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVJ78_11470 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:usu03036] D LVJ78_00585 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_10470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_06045 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LVJ78_06425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ78_04820 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ78_06745 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ78_08180 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D LVJ78_08185 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM D LVJ78_02170 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LVJ78_02340 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ78_06695 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D LVJ78_06860 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D LVJ78_04295 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ78_07925 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LVJ78_03415 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D LVJ78_04420 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D LVJ78_04125 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D LVJ78_11675 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D LVJ78_07750 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D LVJ78_00040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D LVJ78_11730 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LVJ78_02830 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LVJ78_06640 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LVJ78_11735 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D LVJ78_11680 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D LVJ78_11700 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D LVJ78_00045 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ78_11670 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LVJ78_10665 cell division protein ZapA K09888 zapA; cell division protein ZapA D LVJ78_11655 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D LVJ78_06740 AFG1 family ATPase K06916 zapE; cell division protein ZapE D LVJ78_04365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LVJ78_02210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ78_12005 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D LVJ78_12010 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LVJ78_12015 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LVJ78_09380 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ78_09385 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D LVJ78_09390 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D LVJ78_09400 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D LVJ78_11890 AAA family ATPase K03496 parA; chromosome partitioning protein D LVJ78_01035 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LVJ78_01535 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LVJ78_05935 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVJ78_00060 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LVJ78_11885 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LVJ78_02185 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC D LVJ78_08445 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D LVJ78_00285 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D LVJ78_05355 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D LVJ78_01950 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:usu03400] D LVJ78_08435 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LVJ78_11985 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D LVJ78_08065 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_09010 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D LVJ78_07485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LVJ78_09725 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LVJ78_05920 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LVJ78_00535 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D LVJ78_10865 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_12285 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LVJ78_04275 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LVJ78_06195 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LVJ78_02070 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ78_10810 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LVJ78_00610 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LVJ78_02735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LVJ78_00325 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LVJ78_08160 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D LVJ78_04210 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LVJ78_07770 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D LVJ78_12405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LVJ78_11400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LVJ78_11395 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LVJ78_11230 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LVJ78_09615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LVJ78_05685 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LVJ78_00020 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LVJ78_08105 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D LVJ78_07440 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LVJ78_00050 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LVJ78_00705 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LVJ78_02175 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LVJ78_04360 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LVJ78_09330 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LVJ78_07610 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LVJ78_03275 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_07510 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_09145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LVJ78_05805 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_00575 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D LVJ78_06015 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D LVJ78_02715 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D LVJ78_05445 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LVJ78_06170 recA; recombinase RecA K03553 recA; recombination protein RecA D LVJ78_07195 recA; recombinase RecA K03553 recA; recombination protein RecA D LVJ78_00645 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LVJ78_09070 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LVJ78_00815 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LVJ78_11585 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LVJ78_05785 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D LVJ78_06295 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D LVJ78_04670 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LVJ78_09740 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LVJ78_06785 recR; recombination mediator RecR K06187 recR; recombination protein RecR D LVJ78_05990 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LVJ78_08055 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D LVJ78_03540 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D LVJ78_08880 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1 D LVJ78_03445 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D LVJ78_07170 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LVJ78_02180 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LVJ78_11470 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D LVJ78_06425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LVJ78_02340 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LVJ78_04820 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LVJ78_06745 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LVJ78_00340 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LVJ78_05100 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D LVJ78_10410 recX; recombination regulator RecX K03565 recX; regulatory protein D LVJ78_08980 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D LVJ78_12290 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D LVJ78_06690 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LVJ78_06685 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:usu03029] D LVJ78_10885 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LVJ78_02530 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LVJ78_04790 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LVJ78_01415 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D LVJ78_11375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_11440 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_11380 fusA; elongation factor G K02355 fusA; elongation factor G D LVJ78_06050 era; GTPase Era K03595 era; GTPase D LVJ78_10260 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LVJ78_10085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LVJ78_09215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LVJ78_07805 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LVJ78_09370 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LVJ78_09340 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LVJ78_09375 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LVJ78_08240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LVJ78_01450 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D LVJ78_02015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LVJ78_02010 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D LVJ78_10905 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LVJ78_10910 groES; co-chaperone GroES K04078 groES; chaperonin GroES D LVJ78_11840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D LVJ78_08605 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LVJ78_08630 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D LVJ78_06885 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D LVJ78_00285 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D LVJ78_02150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D LVJ78_03855 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:usu02000] D LVJ78_08525 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D LVJ78_00650 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D LVJ78_05210 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D LVJ78_07100 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LVJ78_07105 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LVJ78_09750 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D LVJ78_09110 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D LVJ78_08705 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D LVJ78_09240 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D LVJ78_07075 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D LVJ78_06340 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_00395 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LVJ78_06315 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D LVJ78_06310 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D LVJ78_06305 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D LVJ78_05075 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LVJ78_05085 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D LVJ78_05090 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D LVJ78_04040 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LVJ78_04030 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D LVJ78_04035 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LVJ78_03230 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LVJ78_03225 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LVJ78_03220 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LVJ78_12315 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D LVJ78_12390 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D LVJ78_12385 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D LVJ78_05945 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_06945 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_09235 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D LVJ78_03970 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D LVJ78_03975 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D LVJ78_03980 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D LVJ78_00415 ATP-binding cassette domain-containing protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D LVJ78_00310 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LVJ78_00315 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LVJ78_00305 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LVJ78_06320 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D LVJ78_06325 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D LVJ78_06330 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D LVJ78_04720 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D LVJ78_04715 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D LVJ78_00510 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LVJ78_00515 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LVJ78_00520 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LVJ78_00505 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ78_06675 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D LVJ78_00500 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D LVJ78_09985 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D LVJ78_09980 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D LVJ78_09975 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D LVJ78_09970 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LVJ78_09905 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LVJ78_09895 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D LVJ78_09900 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LVJ78_09890 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LVJ78_08080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ78_08075 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D LVJ78_08070 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LVJ78_03375 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LVJ78_03370 ABC transporter permease K02072 metI; D-methionine transport system permease protein D LVJ78_03365 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LVJ78_01205 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D LVJ78_01200 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D LVJ78_01195 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D LVJ78_01190 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D LVJ78_01185 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D LVJ78_02920 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LVJ78_03240 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LVJ78_02925 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D LVJ78_02930 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D LVJ78_05680 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ78_06240 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ78_06660 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LVJ78_04680 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LVJ78_07555 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D LVJ78_01575 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D LVJ78_01570 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D LVJ78_01565 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D LVJ78_01560 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D LVJ78_02300 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LVJ78_02295 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D LVJ78_02290 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D LVJ78_02285 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D LVJ78_02280 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D LVJ78_02315 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D LVJ78_07015 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D LVJ78_07005 ABC transporter permease K13895 yejE; microcin C transport system permease protein D LVJ78_07000 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D LVJ78_09130 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D LVJ78_09135 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D LVJ78_10960 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D LVJ78_10970 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D LVJ78_10965 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein D LVJ78_10975 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D LVJ78_03360 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LVJ78_03355 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D LVJ78_03350 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D LVJ78_11770 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D LVJ78_11775 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D LVJ78_11765 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D LVJ78_04345 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LVJ78_04340 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LVJ78_10610 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D LVJ78_10340 ABC transporter permease K19341 nosY; Cu-processing system permease protein D LVJ78_10345 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D LVJ78_10515 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D LVJ78_07130 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D LVJ78_07125 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LVJ78_00045 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D LVJ78_00040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D LVJ78_05610 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D LVJ78_10520 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D LVJ78_12330 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D LVJ78_12325 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LVJ78_06300 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D LVJ78_03950 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D LVJ78_02520 sugar porter family MFS transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D LVJ78_02810 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D LVJ78_07315 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D LVJ78_10685 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D LVJ78_10400 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D LVJ78_07455 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LVJ78_07460 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LVJ78_02265 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LVJ78_08825 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D LVJ78_10170 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LVJ78_07630 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LVJ78_02375 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LVJ78_04265 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D LVJ78_07690 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D LVJ78_01655 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D LVJ78_10075 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LVJ78_10070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D LVJ78_10065 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LVJ78_04100 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D LVJ78_04200 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D LVJ78_01365 ammonium transporter K03320 amt; ammonium transporter, Amt family D LVJ78_04435 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LVJ78_10875 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D LVJ78_10440 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D LVJ78_10840 Bax inhibitor-1 family protein K19416 yccA; modulator of FtsH protease D LVJ78_06625 formate/nitrite transporter family protein K21993 fdhC; formate transporter D LVJ78_02305 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D LVJ78_07810 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D LVJ78_11530 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D LVJ78_10180 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D LVJ78_10175 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D LVJ78_06355 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D LVJ78_06630 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D LVJ78_09295 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LVJ78_02755 porB; trimeric porin PorB K18133 K18133; major outer membrane protein P.IB D LVJ78_00080 OmpP1/FadL family transporter K06076 fadL; long-chain fatty acid transport protein D LVJ78_08850 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D LVJ78_10940 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D LVJ78_01280 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D LVJ78_00710 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D LVJ78_08590 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D LVJ78_08700 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ78_09120 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ78_09245 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ78_10490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_05205 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D LVJ78_02220 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D LVJ78_01835 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ78_11780 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D LVJ78_01450 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D LVJ78_04015 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D LVJ78_09000 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D LVJ78_10750 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D LVJ78_00685 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D LVJ78_00690 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D LVJ78_10615 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D LVJ78_10620 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D LVJ78_00775 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D LVJ78_09335 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D LVJ78_10325 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D LVJ78_06030 CidA/LrgA family protein K06518 cidA; holin-like protein D LVJ78_10110 CidA/LrgA family protein K06518 cidA; holin-like protein D LVJ78_10020 SLC45 family MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D LVJ78_12415 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D LVJ78_11920 amino acid permease K11733 lysP; lysine-specific permease D LVJ78_07540 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D LVJ78_09045 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D LVJ78_02215 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D LVJ78_06225 SMR family transporter K03297 emrE; small multidrug resistance pump D LVJ78_02635 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D LVJ78_07720 GRP family sugar transporter K05340 glcU; glucose uptake protein D LVJ78_04740 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D LVJ78_12280 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D LVJ78_03490 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D LVJ78_01090 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter D LVJ78_08385 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LVJ78_10715 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LVJ78_04635 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D LVJ78_06930 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D LVJ78_04645 L-lactate permease K03303 lutP; lactate permease D LVJ78_04320 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D LVJ78_00190 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter D LVJ78_06550 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D LVJ78_07060 cation acetate symporter K14393 actP; cation/acetate symporter D LVJ78_09155 cation acetate symporter K14393 actP; cation/acetate symporter D LVJ78_00680 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D LVJ78_10775 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D LVJ78_02815 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D LVJ78_02570 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D LVJ78_06555 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D LVJ78_01220 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D LVJ78_03145 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D LVJ78_09965 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D LVJ78_09995 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D LVJ78_06765 uracil-xanthine permease family protein K02824 uraA; uracil permease D LVJ78_04025 purine permease K16346 xanQ; xanthine permease XanQ D LVJ78_11210 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D LVJ78_11590 aromatic amino acid transporter K03835 mtr; tryptophan-specific transport protein D LVJ78_07370 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D LVJ78_12170 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D LVJ78_01325 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LVJ78_08155 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family D LVJ78_04765 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter D LVJ78_09275 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D LVJ78_00785 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LVJ78_01915 AEC family transporter K13936 mdcF; malonate transporter and related proteins D LVJ78_06215 AEC family transporter K13936 mdcF; malonate transporter and related proteins D LVJ78_05695 AEC family transporter K24180 mleP; malate permease and related proteins D LVJ78_02655 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D LVJ78_06865 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D LVJ78_01645 LysE family transporter K05835 rhtC; threonine efflux protein D LVJ78_01615 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein D LVJ78_04000 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D LVJ78_03995 AzlD family protein K26606 azlD; branched chain amino acid efflux pump D LVJ78_10925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D LVJ78_10920 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D LVJ78_10915 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D LVJ78_01920 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D LVJ78_08060 MarC family protein K05595 marC; multiple antibiotic resistance protein D LVJ78_11700 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D LVJ78_00410 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D LVJ78_00175 FTR1 family iron permease K07243 FTR; high-affinity iron transporter D LVJ78_00180 efeO; iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO D LVJ78_00185 efeB; iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D LVJ78_07285 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07290 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_07300 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LVJ78_02370 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D LVJ78_05215 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D LVJ78_02210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ78_09755 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D LVJ78_01825 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D LVJ78_04980 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D LVJ78_04985 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D LVJ78_04975 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B D LVJ78_06535 entericidin A/B family lipoprotein K16347 ecnA; entericidin A D LVJ78_06530 entericidin A/B family lipoprotein K16348 ecnB; entericidin B C 02044 Secretion system [BR:usu02044] D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein D LVJ78_05210 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D LVJ78_05215 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D LVJ78_05205 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D LVJ78_11645 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LVJ78_00975 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ78_11635 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D LVJ78_11640 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D LVJ78_05570 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D LVJ78_09765 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D LVJ78_06725 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D LVJ78_03015 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D LVJ78_03010 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D LVJ78_03005 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D LVJ78_03000 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D LVJ78_02995 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D LVJ78_12270 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D LVJ78_08270 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D LVJ78_12275 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D LVJ78_05555 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D LVJ78_05560 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D LVJ78_05565 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D LVJ78_07615 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D LVJ78_05550 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D LVJ78_12255 YggT family protein K02221 yggT; YggT family protein D LVJ78_02410 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D LVJ78_08635 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D LVJ78_12220 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D LVJ78_08915 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D LVJ78_02695 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D LVJ78_08850 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D LVJ78_02955 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LVJ78_11535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D LVJ78_09435 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LVJ78_11430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LVJ78_09440 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LVJ78_02430 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LVJ78_11260 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LVJ78_11145 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LVJ78_00860 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LVJ78_09430 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LVJ78_02150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D LVJ78_09820 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LVJ78_09815 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D LVJ78_09810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:usu02042] D LVJ78_09295 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LVJ78_03765 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:usu02022] D LVJ78_12055 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LVJ78_12060 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D LVJ78_09685 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D LVJ78_09680 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D LVJ78_03895 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ78_09790 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LVJ78_03900 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D LVJ78_09795 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D LVJ78_05225 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D LVJ78_05220 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D LVJ78_07175 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D LVJ78_12215 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D LVJ78_11510 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LVJ78_11515 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D LVJ78_01540 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D LVJ78_01545 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR C 02035 Bacterial motility proteins [BR:usu02035] D LVJ78_08080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LVJ78_01545 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D LVJ78_01540 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D LVJ78_12270 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D LVJ78_08270 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D LVJ78_12275 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D LVJ78_00975 pilin K02650 pilA; type IV pilus assembly protein PilA D LVJ78_11635 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D LVJ78_11640 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D LVJ78_11645 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LVJ78_06725 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D LVJ78_02995 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D LVJ78_03000 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D LVJ78_03005 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D LVJ78_03010 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D LVJ78_03015 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D LVJ78_07615 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D LVJ78_05555 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D LVJ78_05560 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D LVJ78_05565 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D LVJ78_05570 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D LVJ78_09765 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:usu04812] D LVJ78_09380 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ78_11670 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LVJ78_11675 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D LVJ78_12005 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D LVJ78_12010 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LVJ78_12015 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LVJ78_11890 AAA family ATPase K03496 parA; chromosome partitioning protein D LVJ78_01035 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:usu04147] D LVJ78_07755 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LVJ78_00235 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_07525 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LVJ78_11155 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LVJ78_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LVJ78_10905 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LVJ78_02015 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LVJ78_00820 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_02805 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LVJ78_07760 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LVJ78_11375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_11440 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LVJ78_09825 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LVJ78_00290 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LVJ78_05110 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_05130 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LVJ78_06520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LVJ78_07415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LVJ78_09605 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LVJ78_07180 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LVJ78_03410 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LVJ78_06980 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LVJ78_04565 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D LVJ78_06965 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D LVJ78_10770 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LVJ78_08665 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LVJ78_02345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LVJ78_12350 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D LVJ78_05160 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_06135 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_09480 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LVJ78_00260 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D LVJ78_02785 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LVJ78_02425 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LVJ78_00365 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LVJ78_03190 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:usu02048] D LVJ78_03540 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D LVJ78_08880 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1 D LVJ78_03535 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ78_03545 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ78_08875 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ78_09170 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D LVJ78_08910 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D LVJ78_08890 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D LVJ78_08900 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D LVJ78_08895 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D LVJ78_08905 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d D LVJ78_03575 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1 D LVJ78_03570 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2 D LVJ78_03565 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3 D LVJ78_03560 hypothetical protein K19139 csm4; CRISPR-associated protein Csm4 D LVJ78_03555 RAMP superfamily CRISPR-associated protein K19140 csm5; CRISPR-associated protein Csm5 D LVJ78_03530 csx16; CRISPR-associated protein Csx16 K19145 csx16; CRISPR-associated protein Csx16 D LVJ78_04075 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LVJ78_08315 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LVJ78_04070 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LVJ78_08330 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LVJ78_04065 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LVJ78_08335 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LVJ78_00015 restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D LVJ78_00585 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_10470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LVJ78_09025 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D LVJ78_09030 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD D LVJ78_05300 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D LVJ78_07960 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVJ78_08100 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVJ78_05295 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LVJ78_07955 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVJ78_08095 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVJ78_05340 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] D LVJ78_11670 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LVJ78_09380 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVJ78_01535 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LVJ78_05935 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVJ78_12340 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LVJ78_09505 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D LVJ78_08605 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:usu01504] D LVJ78_02210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D LVJ78_02215 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D LVJ78_02220 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D LVJ78_07200 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D LVJ78_08750 TolC family protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:usu00536] D LVJ78_07665 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:usu00537] D LVJ78_00840 alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:usu03100] D LVJ78_02395 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_08650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_11125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_12235 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_11760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LVJ78_03270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_06260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_01720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LVJ78_08365 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ78_10540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LVJ78_03155 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LVJ78_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LVJ78_07795 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LVJ78_05185 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ78_05190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LVJ78_03265 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_04445 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_06265 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LVJ78_07780 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_07785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_07790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_11450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LVJ78_01725 tRNA-His K14226 tRNA-His; tRNA His D LVJ78_02390 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_08655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_11130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_12240 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LVJ78_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_05730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_05735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_07800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_04535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LVJ78_00275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ78_00675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LVJ78_12210 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ78_09655 tRNA-Ile K14230 tRNA-Met; tRNA Met D LVJ78_11755 tRNA-Met K14230 tRNA-Met; tRNA Met D LVJ78_11630 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LVJ78_03770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_04830 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_01715 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LVJ78_06285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_06400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_06390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LVJ78_11445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ78_07270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LVJ78_11435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LVJ78_11455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LVJ78_04780 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_03150 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_04550 tRNA-Val K14237 tRNA-Val; tRNA Val D LVJ78_02405 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LVJ78_05140 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D LVJ78_07635 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D LVJ78_01015 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D LVJ78_01010 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D LVJ78_00590 alpha-hydroxy-acid oxidizing protein K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D LVJ78_09360 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D LVJ78_01250 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D LVJ78_10375 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D LVJ78_03435 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D LVJ78_01590 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D LVJ78_06005 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LVJ78_02720 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LVJ78_10680 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D LVJ78_00740 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D LVJ78_08425 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LVJ78_05670 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LVJ78_07640 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D LVJ78_08465 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D LVJ78_01215 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LVJ78_01935 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LVJ78_01285 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D LVJ78_08020 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LVJ78_08520 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LVJ78_09280 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D LVJ78_11175 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D LVJ78_11040 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D LVJ78_06795 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D LVJ78_02420 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D LVJ78_05955 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D LVJ78_04270 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D LVJ78_08540 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LVJ78_02580 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D LVJ78_02560 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D LVJ78_10205 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D LVJ78_10740 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D LVJ78_01670 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D LVJ78_06925 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D LVJ78_10330 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D LVJ78_06615 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D LVJ78_01585 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D LVJ78_02325 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D LVJ78_02005 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D LVJ78_04105 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D LVJ78_10950 prolyl oligopeptidase family serine peptidase K23722 pfeE; iron(III)-enterobactin esterase [EC:3.1.1.108] D LVJ78_04885 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D LVJ78_10380 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D LVJ78_00440 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D LVJ78_04085 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D LVJ78_07620 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LVJ78_08470 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LVJ78_11490 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LVJ78_01600 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D LVJ78_03780 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D LVJ78_01660 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D LVJ78_05845 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D LVJ78_11110 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D LVJ78_11365 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D LVJ78_04590 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D LVJ78_12185 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D LVJ78_03920 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D LVJ78_06680 yfaE; class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin D LVJ78_08610 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D LVJ78_00255 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D LVJ78_03135 DegV family EDD domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D LVJ78_03440 VOC family protein K08234 yaeR; glyoxylase I family protein D LVJ78_12265 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D LVJ78_08785 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D LVJ78_03690 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A D LVJ78_03695 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D LVJ78_02690 heme biosynthesis protein HemY K02498 hemY; HemY protein D LVJ78_10095 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein D LVJ78_10290 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism D LVJ78_01240 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D LVJ78_10160 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D LVJ78_04175 cold-shock protein K03704 cspA; cold shock protein D LVJ78_10475 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D LVJ78_05605 ATP-binding cassette domain-containing protein K13926 rbbA; ribosome-dependent ATPase C 99975 Protein processing D LVJ78_04180 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D LVJ78_06830 tig; trigger factor K03545 tig; trigger factor D LVJ78_03915 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D LVJ78_01160 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D LVJ78_01155 urease accessory protein UreF K03188 ureF; urease accessory protein D LVJ78_01140 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D LVJ78_01135 urease accessory protein UreD K03190 ureD; urease accessory protein D LVJ78_01150 HupE/UreJ family protein K03192 ureJ; urease accessory protein D LVJ78_04160 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D LVJ78_09710 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D LVJ78_00460 peptidase K07395 K07395; putative proteasome-type protease D LVJ78_03730 OsmC family protein K07397 yhfA; putative redox protein D LVJ78_01960 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D LVJ78_05860 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D LVJ78_01910 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D LVJ78_10135 YraN family protein K07460 yraN; putative endonuclease D LVJ78_00065 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D LVJ78_09935 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D LVJ78_11480 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D LVJ78_08545 replication-associated recombination protein A K07478 ycaJ; putative ATPase D LVJ78_05305 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase D LVJ78_05310 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase D LVJ78_07970 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase D LVJ78_07975 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase D LVJ78_02700 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D LVJ78_00750 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_01110 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_02000 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_02090 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_03165 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_06105 helix-turn-helix domain-containing protein K07483 K07483; transposase D LVJ78_04080 ISL3 family transposase K07485 K07485; transposase D LVJ78_00155 IS110 family transposase K07486 K07486; transposase D LVJ78_04610 transposase K07486 K07486; transposase D LVJ78_07670 transposase K07486 K07486; transposase D LVJ78_10985 transposase K07486 K07486; transposase D LVJ78_00990 transposase K07491 rayT; REP-associated tyrosine transposase D LVJ78_01630 transposase K07491 rayT; REP-associated tyrosine transposase D LVJ78_02760 transposase K07491 rayT; REP-associated tyrosine transposase D LVJ78_06160 IS630 family transposase K07494 K07494; putative transposase D LVJ78_05965 IS630 family transposase K07494 K07494; putative transposase D LVJ78_02885 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase D LVJ78_07650 IS630 family transposase K07494 K07494; putative transposase D LVJ78_00655 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase D LVJ78_05970 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase D LVJ78_06165 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase D LVJ78_07655 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase D LVJ78_10700 winged helix-turn-helix domain-containing protein K07494 K07494; putative transposase C 99979 Viral proteins C 99998 Others D LVJ78_04465 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D LVJ78_05810 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LVJ78_08810 multidrug efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D LVJ78_00870 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D LVJ78_02140 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D LVJ78_04735 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D LVJ78_06510 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D LVJ78_09660 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D LVJ78_00700 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D LVJ78_03330 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D LVJ78_11005 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D LVJ78_08985 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LVJ78_05535 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D LVJ78_08420 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D LVJ78_02620 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D LVJ78_04935 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D LVJ78_12395 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D LVJ78_04490 septation protein A K06190 ispZ; intracellular septation protein D LVJ78_07450 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D LVJ78_05050 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D LVJ78_08480 carbon starvation protein A K06200 cstA; carbon starvation protein D LVJ78_08960 typA; translational GTPase TypA K06207 typA; GTP-binding protein D LVJ78_04520 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D LVJ78_10300 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D LVJ78_00165 PhoH family protein K07175 phoH2; PhoH-like ATPase D LVJ78_09140 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D LVJ78_07550 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D LVJ78_05175 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D LVJ78_00495 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D LVJ78_01455 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D LVJ78_05960 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D LVJ78_01385 peptidoglycan DD-metalloendopeptidase family protein K12943 ygeR; lipoprotein YgeR D LVJ78_11830 capsule biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D LVJ78_11825 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D LVJ78_02890 surface lipoprotein assembly modifier K07280 K07280; outer membrane protein D LVJ78_04495 LysM peptidoglycan-binding domain-containing protein K07288 tspA; uncharacterized membrane protein D LVJ78_05585 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D LVJ78_12040 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB D LVJ78_06720 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D LVJ78_09990 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D LVJ78_05490 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D LVJ78_11055 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D LVJ78_03325 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D LVJ78_01125 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D LVJ78_10350 nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein D LVJ78_02660 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D LVJ78_10335 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D LVJ78_07035 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D LVJ78_09100 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B D LVJ78_06935 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D LVJ78_00965 patatin-like phospholipase family protein K07001 K07001; NTE family protein D LVJ78_05710 patatin-like phospholipase family protein K07001 K07001; NTE family protein D LVJ78_01850 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D LVJ78_03040 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D LVJ78_02060 YihY family inner membrane protein K07058 K07058; membrane protein D LVJ78_05260 heme-binding protein K11477 glcG; glc operon protein GlcG D LVJ78_03485 LemA family protein K03744 lemA; LemA protein D LVJ78_08090 LemA family protein K03744 lemA; LemA protein D LVJ78_01095 SlyX family protein K03745 slyX; SlyX protein D LVJ78_11475 DUF494 domain-containing protein K03747 smg; Smg protein D LVJ78_05105 YdcF family protein K03748 sanA; SanA protein D LVJ78_11070 DedA family protein K03975 dedA; membrane-associated protein D LVJ78_09095 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D LVJ78_10305 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D LVJ78_10450 DUF1440 domain-containing protein K08996 yagU; putative membrane protein D LVJ78_10730 YchJ family protein K09858 K09858; SEC-C motif domain protein D LVJ78_10215 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein D LVJ78_00200 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D LVJ78_03495 TPM domain-containing protein K06872 K06872; uncharacterized protein D LVJ78_08305 alpha/beta hydrolase K06889 K06889; uncharacterized protein D LVJ78_11045 ATP-binding protein K06923 K06923; uncharacterized protein D LVJ78_04380 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D LVJ78_10555 ATP/GTP-binding protein K06945 K06945; uncharacterized protein D LVJ78_05405 hpnE; hydroxysqualene dehydroxylase HpnE K06954 K06954; uncharacterized protein D LVJ78_01225 N-acetyltransferase K06975 K06975; uncharacterized protein D LVJ78_01230 N-acetyltransferase K06975 K06975; uncharacterized protein D LVJ78_05930 N-acetyltransferase K06975 K06975; uncharacterized protein D LVJ78_07255 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D LVJ78_01295 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein D LVJ78_05885 YecA family protein K07039 K07039; uncharacterized protein D LVJ78_08695 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D LVJ78_10165 nitroreductase family protein K07078 K07078; uncharacterized protein D LVJ78_02900 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D LVJ78_07205 TSUP family transporter K07090 K07090; uncharacterized protein D LVJ78_09850 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D LVJ78_10900 PhoX family phosphatase K07093 K07093; uncharacterized protein D LVJ78_07080 metallophosphoesterase K07098 K07098; uncharacterized protein D LVJ78_03795 phosphoribosyltransferase K07101 K07101; uncharacterized protein D LVJ78_07860 hypothetical protein K07112 K07112; uncharacterized protein D LVJ78_07865 YeeE/YedE family protein K07112 K07112; uncharacterized protein D LVJ78_00600 NAD(P)H-binding protein K07118 K07118; uncharacterized protein D LVJ78_10930 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D LVJ78_11835 sel1 repeat family protein K07126 K07126; uncharacterized protein D LVJ78_10545 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein D LVJ78_02940 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D LVJ78_02155 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D LVJ78_09640 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D LVJ78_04525 PFL family protein K09157 K09157; uncharacterized protein D LVJ78_06415 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D LVJ78_04485 YciI family protein K09780 K09780; uncharacterized protein D LVJ78_02565 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D LVJ78_04305 YbaN family protein K09790 K09790; uncharacterized protein D LVJ78_07430 Trm112 family protein K09791 K09791; uncharacterized protein D LVJ78_02910 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D LVJ78_07190 DUF456 family protein K09793 K09793; uncharacterized protein D LVJ78_06445 YdcH family protein K09794 K09794; uncharacterized protein D LVJ78_07840 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D LVJ78_09265 RnfH family protein K09801 K09801; uncharacterized protein D LVJ78_09105 ABC-type transport auxiliary lipoprotein family protein K09857 K09857; uncharacterized protein D LVJ78_06395 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D LVJ78_11660 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D LVJ78_06040 YihD family protein K09896 K09896; uncharacterized protein D LVJ78_10220 DUF1043 family protein K09908 K09908; uncharacterized protein D LVJ78_09560 DUF484 family protein K09921 K09921; uncharacterized protein D LVJ78_08555 FixH family protein K09926 K09926; uncharacterized protein D LVJ78_08290 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D LVJ78_04300 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D LVJ78_12035 hypothetical protein K09943 K09943; uncharacterized protein D LVJ78_07885 YegP family protein K09946 K09946; uncharacterized protein D LVJ78_07850 TraB/GumN family protein K09973 K09973; uncharacterized protein D LVJ78_06835 DUF1853 family protein K09977 K09977; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024