+D GENES KO #

  KEGG Orthology (KO) - Ureibacillus thermophilus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:uth00010] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_04800 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DKZ56_04785 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DKZ56_13595 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DKZ56_13605 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DKZ56_11865 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D DKZ56_13600 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DKZ56_13590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DKZ56_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DKZ56_06230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DKZ56_06235 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DKZ56_04270 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_06240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_07425 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DKZ56_07430 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DKZ56_02790 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DKZ56_12345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:uth00020] D DKZ56_11925 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DKZ56_10210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DKZ56_11920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DKZ56_09135 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DKZ56_09140 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_07425 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DKZ56_07430 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DKZ56_06955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DKZ56_06950 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DKZ56_00990 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_03890 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_11635 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DKZ56_11630 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DKZ56_11640 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DKZ56_14860 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DKZ56_01585 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_02700 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D DKZ56_02635 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_06415 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_12345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DKZ56_06230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DKZ56_06235 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DKZ56_04270 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_06240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:uth00030] D DKZ56_06810 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DKZ56_07640 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DKZ56_04790 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DKZ56_04875 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DKZ56_10640 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D DKZ56_08575 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D DKZ56_07985 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DKZ56_01990 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DKZ56_04785 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DKZ56_04800 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:uth00040] D DKZ56_06810 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DKZ56_01215 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:uth00051] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_04800 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DKZ56_04785 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DKZ56_13595 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DKZ56_04875 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:uth00052] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:uth00520] D DKZ56_03620 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DKZ56_03610 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D DKZ56_01995 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DKZ56_04795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_01030 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DKZ56_04895 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D DKZ56_05655 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D DKZ56_05485 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00620 Pyruvate metabolism [PATH:uth00620] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_07425 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DKZ56_07430 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DKZ56_06230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DKZ56_06235 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DKZ56_04270 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_06240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DKZ56_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DKZ56_11950 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DKZ56_09035 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09525 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09030 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_09530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_11955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DKZ56_09180 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D DKZ56_02790 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D DKZ56_00990 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_03890 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_09355 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D DKZ56_14425 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D DKZ56_09270 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DKZ56_08485 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D DKZ56_02635 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_06415 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_02700 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D DKZ56_14860 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DKZ56_01585 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DKZ56_12345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DKZ56_03020 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_10165 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:uth00630] D DKZ56_01745 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_03020 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_11925 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DKZ56_10210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07690 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DKZ56_09665 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DKZ56_09670 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D DKZ56_09645 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_09650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_01630 catalase K03781 katE; catalase [EC:1.11.1.6] D DKZ56_08960 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_04885 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DKZ56_09325 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DKZ56_09330 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DKZ56_09320 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_12825 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D DKZ56_08965 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DKZ56_14100 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DKZ56_09340 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:uth00640] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_09630 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DKZ56_09635 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DKZ56_09640 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_04750 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DKZ56_11440 acryloyl-CoA reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D DKZ56_11950 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DKZ56_09035 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09525 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09030 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_09530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_11955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DKZ56_09670 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D DKZ56_09665 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DKZ56_09645 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_09650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_06950 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DKZ56_06955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DKZ56_03855 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DKZ56_08335 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:uth00650] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_04740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_14515 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_12845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DKZ56_09045 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D DKZ56_04750 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DKZ56_07695 phaC; class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D DKZ56_07690 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DKZ56_11635 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DKZ56_11630 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DKZ56_11640 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DKZ56_00990 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_03890 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DKZ56_07425 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DKZ56_07430 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DKZ56_09040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DKZ56_09005 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D DKZ56_09010 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D DKZ56_10945 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D DKZ56_09200 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D DKZ56_03245 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D DKZ56_10150 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DKZ56_10155 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DKZ56_09955 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:uth00660] D DKZ56_10150 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DKZ56_10155 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DKZ56_06950 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DKZ56_06955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DKZ56_08935 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D DKZ56_10175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DKZ56_10180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DKZ56_10170 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:uth00562] D DKZ56_06310 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DKZ56_03855 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DKZ56_13595 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:uth00190] D DKZ56_03735 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DKZ56_12635 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DKZ56_11635 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DKZ56_11630 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DKZ56_11640 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DKZ56_08300 ubiquinol-cytochrome c reductase iron-sulfur subunit K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8] D DKZ56_08305 cytochrome b6 K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8] D DKZ56_08310 cytochrome C oxidase Cbb3 K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8] D DKZ56_04145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DKZ56_06440 cytochrome B6 K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D DKZ56_06435 cytochrome (ubi)quinol oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D DKZ56_06430 cytochrome ubiquinol oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D DKZ56_08465 b(o/a)3-type cytochrome-c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D DKZ56_06425 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D DKZ56_08470 cytochrome B5 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D DKZ56_06420 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D DKZ56_08740 qoxD; cytochrome aa3 quinol oxidase subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5] D DKZ56_08745 qoxC; cytochrome aa3 quinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5] D DKZ56_08750 qoxB; cytochrome aa3 quinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5] D DKZ56_08755 qoxA; cytochrome aa3 quinol oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D DKZ56_00430 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DKZ56_00425 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DKZ56_04925 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DKZ56_04935 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DKZ56_04930 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DKZ56_04920 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DKZ56_04940 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DKZ56_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DKZ56_04915 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DKZ56_04910 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DKZ56_01065 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D DKZ56_13720 ppaX; pyrophosphatase PpaX K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1] D DKZ56_06120 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:uth00710] D DKZ56_13600 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DKZ56_13605 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DKZ56_11865 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D DKZ56_04785 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DKZ56_04800 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DKZ56_07640 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DKZ56_04875 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DKZ56_13595 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DKZ56_06810 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DKZ56_04790 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DKZ56_12345 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:uth00720] D DKZ56_02635 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_06415 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_14860 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DKZ56_01585 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DKZ56_11635 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DKZ56_11630 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DKZ56_11640 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DKZ56_06955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DKZ56_06950 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07425 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DKZ56_07430 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DKZ56_11920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DKZ56_10210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DKZ56_11950 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DKZ56_09035 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09525 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09030 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_09530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_11955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DKZ56_09665 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DKZ56_09645 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_09650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_08565 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D DKZ56_09560 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:uth00680] D DKZ56_14100 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DKZ56_04885 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_04785 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DKZ56_04800 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_13590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DKZ56_13890 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DKZ56_10040 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DKZ56_13900 HAD family hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3] D DKZ56_12740 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:uth00910] D DKZ56_09340 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D DKZ56_03690 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DKZ56_00035 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D DKZ56_08495 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10980 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DKZ56_10975 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DKZ56_14900 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D DKZ56_09985 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:uth00920] D DKZ56_12705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DKZ56_12700 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DKZ56_12695 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DKZ56_12690 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DKZ56_14705 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D DKZ56_14700 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D DKZ56_03365 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_14695 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_12715 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DKZ56_12720 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DKZ56_11970 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D DKZ56_12710 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D DKZ56_12290 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D DKZ56_12285 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D DKZ56_08805 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D DKZ56_04055 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DKZ56_01890 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DKZ56_14710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DKZ56_10255 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D DKZ56_10130 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:uth00061] D DKZ56_11950 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DKZ56_09035 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09525 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DKZ56_09030 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_09530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DKZ56_11955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DKZ56_06865 acyl carrier protein K02078 acpP; acyl carrier protein D DKZ56_06855 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DKZ56_05895 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DKZ56_14190 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DKZ56_05900 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DKZ56_02120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_06860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_07375 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_04990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DKZ56_08105 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DKZ56_03540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_11685 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:uth00071] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DKZ56_12845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DKZ56_11675 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17] D DKZ56_04750 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DKZ56_12760 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DKZ56_14500 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DKZ56_03540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_11685 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:uth00100] D DKZ56_08505 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:uth00561] D DKZ56_08965 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DKZ56_09545 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DKZ56_06850 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DKZ56_10315 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DKZ56_03805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DKZ56_00435 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DKZ56_10385 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:uth00564] D DKZ56_08195 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D DKZ56_07465 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D DKZ56_10315 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DKZ56_03805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DKZ56_00435 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DKZ56_12330 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D DKZ56_01250 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DKZ56_06480 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DKZ56_07220 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DKZ56_14685 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DKZ56_07395 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DKZ56_00965 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DKZ56_00475 heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-] D DKZ56_13715 acyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:uth00592] D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:uth00230] D DKZ56_07945 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DKZ56_07985 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DKZ56_01990 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DKZ56_00520 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DKZ56_00500 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D DKZ56_00510 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DKZ56_00525 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D DKZ56_00535 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D DKZ56_00530 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DKZ56_00515 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D DKZ56_00550 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D DKZ56_00555 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D DKZ56_00540 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D DKZ56_14420 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D DKZ56_00545 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DKZ56_00505 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DKZ56_11075 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DKZ56_09105 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D DKZ56_02750 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DKZ56_01915 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D DKZ56_02295 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DKZ56_08245 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DKZ56_11605 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D DKZ56_01605 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D DKZ56_09380 xanthine dehydrogenase K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D DKZ56_09385 pucD; xanthine dehydrogenase subunit D K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D DKZ56_09390 (2Fe-2S)-binding protein K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D DKZ56_00590 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DKZ56_09415 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D DKZ56_06755 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D DKZ56_03655 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_09350 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_03665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DKZ56_11070 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DKZ56_06115 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D DKZ56_05965 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D DKZ56_02495 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DKZ56_00490 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D DKZ56_09360 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D DKZ56_07415 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DKZ56_03160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DKZ56_12720 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DKZ56_12715 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DKZ56_09440 NAD(P)/FAD-dependent oxidoreductase K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D DKZ56_09445 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D DKZ56_09450 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D DKZ56_09470 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5] D DKZ56_09465 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00240 Pyrimidine metabolism [PATH:uth00240] D DKZ56_06720 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DKZ56_06715 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DKZ56_06705 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DKZ56_06710 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D DKZ56_06730 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D DKZ56_06725 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D DKZ56_06740 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D DKZ56_06735 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D DKZ56_07205 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D DKZ56_08245 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DKZ56_11310 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D DKZ56_04770 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D DKZ56_08180 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D DKZ56_04890 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D DKZ56_06695 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DKZ56_07415 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DKZ56_07990 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D DKZ56_10585 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D DKZ56_03655 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_09350 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_03665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DKZ56_10720 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DKZ56_04815 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D DKZ56_08985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:uth00250] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_14950 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D DKZ56_14415 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D DKZ56_10990 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DKZ56_12275 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DKZ56_04300 carbon-nitrogen family hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D DKZ56_11995 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DKZ56_08775 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D DKZ56_09875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DKZ56_01720 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_09880 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_02495 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DKZ56_00545 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DKZ56_06705 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DKZ56_10980 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DKZ56_10975 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DKZ56_00035 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D DKZ56_08495 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DKZ56_00040 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_06720 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DKZ56_06715 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DKZ56_00530 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DKZ56_03620 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DKZ56_00520 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:uth00260] D DKZ56_08800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_11650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_07335 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DKZ56_01345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DKZ56_01085 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D DKZ56_01080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DKZ56_04030 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DKZ56_04885 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DKZ56_08965 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DKZ56_13590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DKZ56_13890 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DKZ56_10040 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DKZ56_13900 HAD family hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3] D DKZ56_04260 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D DKZ56_09325 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DKZ56_09330 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DKZ56_09320 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_12825 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D DKZ56_14685 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DKZ56_04435 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DKZ56_08500 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D DKZ56_04385 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DKZ56_04380 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DKZ56_04390 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:uth00270] D DKZ56_04055 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DKZ56_01890 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DKZ56_14710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DKZ56_12555 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DKZ56_00650 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DKZ56_00655 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DKZ56_12340 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DKZ56_10775 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D DKZ56_02750 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DKZ56_04295 pyridoxal phosphate-dependent aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D DKZ56_12060 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D DKZ56_13750 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D DKZ56_08800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_11650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_07335 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DKZ56_01345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DKZ56_10255 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D DKZ56_10130 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D DKZ56_01355 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D DKZ56_04115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_11915 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DKZ56_13890 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DKZ56_10040 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:uth00280] D DKZ56_04115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DKZ56_09620 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D DKZ56_09630 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DKZ56_09635 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DKZ56_09640 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_04750 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DKZ56_12760 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DKZ56_14500 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DKZ56_09670 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D DKZ56_09665 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D DKZ56_09645 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_09650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_06105 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D DKZ56_03855 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DKZ56_09040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DKZ56_09005 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D DKZ56_09010 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D DKZ56_10945 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:uth00290] D DKZ56_04435 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DKZ56_10175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DKZ56_10180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DKZ56_10170 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D DKZ56_10150 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DKZ56_10155 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DKZ56_10160 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DKZ56_10145 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DKZ56_04115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DKZ56_09620 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D DKZ56_10165 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:uth00300] D DKZ56_01345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DKZ56_08800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_11650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_07335 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DKZ56_07340 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DKZ56_15055 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DKZ56_08330 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DKZ56_12135 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DKZ56_12255 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DKZ56_10965 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DKZ56_09245 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DKZ56_10970 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DKZ56_08020 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DKZ56_10220 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D DKZ56_06465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DKZ56_00935 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:uth00310] D DKZ56_09140 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_12250 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:uth00220] D DKZ56_11805 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D DKZ56_09875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DKZ56_01720 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_09880 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_03585 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D DKZ56_00530 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_06720 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DKZ56_06715 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DKZ56_00035 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D DKZ56_08495 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_12145 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D DKZ56_12140 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DKZ56_12150 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DKZ56_12135 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:uth00330] D DKZ56_06280 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19] D DKZ56_04670 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D DKZ56_14850 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D DKZ56_09420 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DKZ56_03585 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D DKZ56_01575 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D DKZ56_09850 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D DKZ56_00625 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D DKZ56_00040 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D DKZ56_09895 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DKZ56_09220 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_12250 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:uth00340] D DKZ56_13705 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D DKZ56_13710 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D DKZ56_13680 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D DKZ56_11005 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D DKZ56_13690 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D DKZ56_13685 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D DKZ56_13695 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DKZ56_12055 hisJ; histidinol-phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D DKZ56_13700 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:uth00350] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DKZ56_04195 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45] D DKZ56_00685 tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism [PATH:uth00360] D DKZ56_04740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_14515 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DKZ56_12250 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DKZ56_09420 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:uth00380] D DKZ56_04195 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45] D DKZ56_09140 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_09420 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DKZ56_01630 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:uth00400] D DKZ56_12180 aroF; 3-deoxy-7-phosphoheptulonate synthase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D DKZ56_08260 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DKZ56_09485 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DKZ56_10755 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DKZ56_09315 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DKZ56_08280 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DKZ56_08255 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DKZ56_10430 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DKZ56_10425 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DKZ56_04405 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DKZ56_04395 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D DKZ56_04400 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D DKZ56_04385 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DKZ56_04380 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DKZ56_04390 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DKZ56_08265 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D DKZ56_11190 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D DKZ56_08275 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DKZ56_11185 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:uth00410] D DKZ56_08365 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D DKZ56_08360 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DKZ56_04750 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D DKZ56_03855 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:uth00430] D DKZ56_09425 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DKZ56_11995 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DKZ56_00035 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:uth00450] D DKZ56_10130 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D DKZ56_12555 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DKZ56_00650 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DKZ56_00655 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DKZ56_12775 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D DKZ56_13670 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DKZ56_12715 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DKZ56_02055 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:uth00460] D DKZ56_09425 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DKZ56_14415 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D DKZ56_04885 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DKZ56_09340 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:uth00470] D DKZ56_00890 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DKZ56_12250 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DKZ56_00940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DKZ56_00530 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DKZ56_11615 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DKZ56_06590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DKZ56_08690 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D DKZ56_14950 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D DKZ56_08500 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D DKZ56_10965 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DKZ56_08020 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DKZ56_02735 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12] C 00480 Glutathione metabolism [PATH:uth00480] D DKZ56_09425 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DKZ56_08605 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D DKZ56_12590 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DKZ56_11920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DKZ56_10420 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D DKZ56_12935 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:uth00540] D DKZ56_04125 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DKZ56_05260 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 00542 O-Antigen repeat unit biosynthesis [PATH:uth00542] D DKZ56_05335 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:uth00541] D DKZ56_01995 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DKZ56_04895 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D DKZ56_05655 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D DKZ56_05460 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K24282 elg3; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-idose 2-epimerase [EC:5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:uth00550] D DKZ56_04795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_01030 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DKZ56_12200 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DKZ56_06590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DKZ56_06465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DKZ56_00940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DKZ56_00935 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DKZ56_10590 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D DKZ56_07215 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DKZ56_01225 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_01095 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_06585 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DKZ56_09120 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DKZ56_08420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DKZ56_12575 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D DKZ56_04665 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D DKZ56_06575 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D DKZ56_06580 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D DKZ56_10455 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A D DKZ56_02290 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_06045 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7] D DKZ56_12120 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B C 00552 Teichoic acid biosynthesis [PATH:uth00552] D DKZ56_01225 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_01095 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_05335 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DKZ56_05670 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D DKZ56_05345 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D DKZ56_09235 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D DKZ56_10385 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:uth00543] D DKZ56_05335 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DKZ56_04055 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:uth00730] D DKZ56_12975 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D DKZ56_10000 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D DKZ56_01445 thiamine biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D DKZ56_11020 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_11775 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12045 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12040 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D DKZ56_09580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DKZ56_01450 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D DKZ56_01460 tenI; thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D DKZ56_09995 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DKZ56_10005 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DKZ56_06805 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DKZ56_06815 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D DKZ56_03160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DKZ56_01465 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:uth00740] D DKZ56_09810 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DKZ56_14775 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DKZ56_09815 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DKZ56_05840 HAD family phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D DKZ56_14770 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D DKZ56_14780 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DKZ56_07285 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D DKZ56_01360 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D DKZ56_04195 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45] D DKZ56_09995 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DKZ56_07945 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:uth00750] D DKZ56_04465 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D DKZ56_05555 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D DKZ56_10040 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DKZ56_01080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DKZ56_04030 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DKZ56_02280 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:uth00760] D DKZ56_11785 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D DKZ56_11780 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D DKZ56_00620 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D DKZ56_09105 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D DKZ56_10745 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D DKZ56_00615 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D DKZ56_10280 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D DKZ56_05970 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:uth00770] D DKZ56_10150 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DKZ56_10155 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DKZ56_10160 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DKZ56_10145 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DKZ56_08355 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D DKZ56_06545 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DKZ56_13570 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DKZ56_08360 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DKZ56_08515 coaW; type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D DKZ56_01905 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D DKZ56_06505 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D DKZ56_11870 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D DKZ56_00900 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D DKZ56_04115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DKZ56_08365 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:uth00780] D DKZ56_05900 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DKZ56_02120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_06860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_07375 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_04990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DKZ56_08105 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DKZ56_12910 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DKZ56_12905 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D DKZ56_12920 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D DKZ56_08350 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:uth00785] D DKZ56_09345 lipoate--protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DKZ56_12665 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DKZ56_04630 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D DKZ56_13575 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DKZ56_06235 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DKZ56_04270 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_06240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DKZ56_09135 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DKZ56_09140 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DKZ56_09630 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DKZ56_09635 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DKZ56_09640 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DKZ56_09325 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DKZ56_09330 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DKZ56_09320 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DKZ56_12825 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:uth00790] D DKZ56_08220 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D DKZ56_01880 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D DKZ56_01875 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D DKZ56_01885 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D DKZ56_09000 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DKZ56_11320 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DKZ56_11325 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DKZ56_09810 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DKZ56_14775 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DKZ56_14115 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DKZ56_14440 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DKZ56_14435 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DKZ56_14445 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DKZ56_14450 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DKZ56_09375 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DKZ56_14085 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DKZ56_14080 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DKZ56_14050 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DKZ56_14070 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D DKZ56_14060 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DKZ56_09370 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D DKZ56_14075 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:uth00670] D DKZ56_09000 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DKZ56_08565 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D DKZ56_09560 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DKZ56_04885 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DKZ56_00510 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DKZ56_00505 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DKZ56_06780 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DKZ56_09320 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DKZ56_00650 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DKZ56_00655 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D DKZ56_08985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D DKZ56_10395 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:uth00860] D DKZ56_11370 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D DKZ56_11345 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DKZ56_14670 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DKZ56_11350 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DKZ56_11360 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D DKZ56_11355 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D DKZ56_13815 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D DKZ56_10680 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D DKZ56_13915 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D DKZ56_00660 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D DKZ56_13805 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D DKZ56_13810 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D DKZ56_04625 heme-dependent peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D DKZ56_09745 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D DKZ56_12305 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D DKZ56_09795 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D DKZ56_12300 sirohydrochlorin chelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4] D DKZ56_04145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DKZ56_06420 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D DKZ56_09700 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D DKZ56_09725 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D DKZ56_09695 cobJ; precorrin-3B C(17)-methyltransferase K21479 cbiH60; cobalt-factor III methyltransferase [EC:2.1.1.272] D DKZ56_09730 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D DKZ56_09735 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D DKZ56_09705 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D DKZ56_09715 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D DKZ56_09720 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D DKZ56_09710 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D DKZ56_09740 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D DKZ56_04725 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DKZ56_09750 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DKZ56_09755 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D DKZ56_07500 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D DKZ56_08650 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D DKZ56_08655 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D DKZ56_03480 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D DKZ56_08660 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D DKZ56_07505 pyridoxal phosphate-dependent class II aminotransferase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D DKZ56_02600 hypothetical protein K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48] D DKZ56_08620 heme oxygenase K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:uth00130] D DKZ56_08235 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DKZ56_12400 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D DKZ56_12395 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D DKZ56_12390 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D DKZ56_01555 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D DKZ56_12380 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D DKZ56_12385 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D DKZ56_01165 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:uth00900] D DKZ56_09580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DKZ56_07225 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D DKZ56_02905 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D DKZ56_02020 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D DKZ56_02910 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D DKZ56_10500 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D DKZ56_08840 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_09575 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DKZ56_08230 heptaprenyl diphosphate synthase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30] D DKZ56_08240 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D DKZ56_07215 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:uth00909] D DKZ56_08505 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis D DKZ56_06040 aldehyde dehydrogenase K25072 crtNc; 4,4'-diapolycopenoate synthase [EC:1.2.99.10] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:uth00907] D DKZ56_09040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D DKZ56_07640 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:uth01054] D DKZ56_14950 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D DKZ56_12400 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D DKZ56_08725 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis D DKZ56_09895 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] C 00261 Monobactam biosynthesis [PATH:uth00261] D DKZ56_12715 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DKZ56_08800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_11650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DKZ56_07335 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DKZ56_07340 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DKZ56_15055 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DKZ56_08330 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:uth00521] D DKZ56_05150 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DKZ56_06310 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:uth00401] D DKZ56_08275 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D DKZ56_10430 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DKZ56_10425 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D DKZ56_06855 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DKZ56_02120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_06860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_07375 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_08105 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D DKZ56_06865 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:uth00999] D DKZ56_12340 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DKZ56_10755 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites D DKZ56_02735 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:uth00362] D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DKZ56_14000 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D DKZ56_04655 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DKZ56_08940 PIG-L family deacetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D DKZ56_08935 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D DKZ56_12845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DKZ56_11675 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17] D DKZ56_04740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_14515 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:uth00627] D DKZ56_09420 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DKZ56_09180 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:uth00625] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation D DKZ56_14000 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:uth00622] D DKZ56_14000 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D DKZ56_04655 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation D DKZ56_03275 cytochrome-c3 hydrogenase K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D DKZ56_03270 hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation D DKZ56_12840 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:uth00643] D DKZ56_09420 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DKZ56_14000 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D DKZ56_04655 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:uth00626] D DKZ56_14430 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:uth03020] D DKZ56_02985 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DKZ56_02990 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DKZ56_03185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DKZ56_06760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DKZ56_04765 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:uth03010] D DKZ56_08185 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DKZ56_07195 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DKZ56_03085 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DKZ56_12065 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DKZ56_03140 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DKZ56_02460 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DKZ56_03005 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DKZ56_03125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DKZ56_03220 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DKZ56_03050 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DKZ56_03180 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DKZ56_03000 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DKZ56_03175 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DKZ56_03120 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DKZ56_07290 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DKZ56_06895 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DKZ56_03100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DKZ56_02470 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DKZ56_03075 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DKZ56_10700 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DKZ56_10635 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DKZ56_02965 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DKZ56_03070 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DKZ56_03055 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DKZ56_03060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DKZ56_03115 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DKZ56_03130 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DKZ56_02975 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DKZ56_02485 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DKZ56_02970 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DKZ56_02960 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DKZ56_03215 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DKZ56_03105 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DKZ56_03150 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DKZ56_03090 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DKZ56_03190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DKZ56_03135 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DKZ56_06915 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DKZ56_11830 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DKZ56_11265 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DKZ56_03080 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DKZ56_03065 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DKZ56_03110 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DKZ56_01985 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D DKZ56_11255 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DKZ56_06825 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DKZ56_03095 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DKZ56_03145 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DKZ56_04810 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DKZ56_06530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DKZ56_02945 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DKZ56_10400 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DKZ56_02365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DKZ56_11835 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DKZ56_03170 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DKZ56_02995 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A C 00970 Aminoacyl-tRNA biosynthesis [PATH:uth00970] D DKZ56_12435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DKZ56_02915 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D DKZ56_00450 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DKZ56_00445 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DKZ56_00455 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DKZ56_10830 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DKZ56_11050 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DKZ56_10565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D DKZ56_11845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DKZ56_02275 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DKZ56_02920 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DKZ56_02055 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DKZ56_06780 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DKZ56_11330 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DKZ56_12310 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DKZ56_06675 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DKZ56_01860 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DKZ56_04685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DKZ56_07235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_10020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_11055 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DKZ56_11755 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DKZ56_11750 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DKZ56_12115 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DKZ56_05905 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:uth03060] D DKZ56_03155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DKZ56_02950 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DKZ56_13525 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DKZ56_11085 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D DKZ56_11105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DKZ56_00975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_02375 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_05310 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_05560 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_06890 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DKZ56_06880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DKZ56_00750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D DKZ56_00745 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D DKZ56_06920 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DKZ56_09790 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DKZ56_06685 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:uth04122] D DKZ56_11020 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_11775 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12045 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_13065 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D DKZ56_11015 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DKZ56_14400 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DKZ56_14050 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DKZ56_09375 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DKZ56_14085 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DKZ56_14045 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D DKZ56_14065 thiamine biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D DKZ56_14080 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DKZ56_14070 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D DKZ56_12040 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D DKZ56_01455 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D DKZ56_01445 thiamine biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:uth03018] D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DKZ56_07295 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DKZ56_13515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DKZ56_00925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DKZ56_08140 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DKZ56_04805 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DKZ56_07410 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D DKZ56_06210 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D DKZ56_07345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_10665 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DKZ56_00730 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DKZ56_07480 RNA chaperone Hfq K03666 hfq; host factor-I protein D DKZ56_06120 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:uth03030] D DKZ56_11965 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DKZ56_07240 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D DKZ56_02185 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DKZ56_02090 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DKZ56_10705 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DKZ56_02355 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DKZ56_02490 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DKZ56_10550 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_08520 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DKZ56_09990 reverse transcriptase-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DKZ56_06935 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DKZ56_11715 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:uth03410] D DKZ56_08400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DKZ56_04470 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DKZ56_14740 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DKZ56_11875 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DKZ56_01025 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DKZ56_08875 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_11080 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:uth03420] D DKZ56_01970 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DKZ56_05710 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D DKZ56_05705 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D DKZ56_11655 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D DKZ56_00470 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:uth03430] D DKZ56_07455 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DKZ56_11695 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D DKZ56_07460 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D DKZ56_00470 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DKZ56_09565 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DKZ56_09570 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DKZ56_11080 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_11965 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DKZ56_07240 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D DKZ56_02355 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DKZ56_02185 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DKZ56_10705 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DKZ56_02090 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DKZ56_03915 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03925 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03935 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:uth03440] D DKZ56_11080 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_02345 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D DKZ56_10575 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DKZ56_02175 recR; recombination protein RecR K06187 recR; recombination protein RecR D DKZ56_07405 recA; recombinase RecA K03553 recA; recombination protein RecA D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_11125 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DKZ56_11120 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DKZ56_06840 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DKZ56_13475 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DKZ56_11000 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DKZ56_11965 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DKZ56_07240 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D DKZ56_02355 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DKZ56_02185 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DKZ56_10705 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DKZ56_02090 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DKZ56_06770 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:uth03450] D DKZ56_00690 Ku protein K10979 ku; DNA end-binding protein Ku D DKZ56_00695 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:uth02010] D DKZ56_12705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DKZ56_12700 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DKZ56_12695 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DKZ56_12690 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DKZ56_14705 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D DKZ56_14700 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D DKZ56_03365 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_14695 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_14035 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DKZ56_14040 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D DKZ56_06165 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D DKZ56_06170 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D DKZ56_06175 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D DKZ56_06180 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D DKZ56_03780 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DKZ56_03775 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D DKZ56_03770 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DKZ56_14030 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DKZ56_09410 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D DKZ56_09400 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D DKZ56_09405 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D DKZ56_09395 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D DKZ56_08595 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D DKZ56_08590 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D DKZ56_08585 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DKZ56_08580 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D DKZ56_10450 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DKZ56_10445 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D DKZ56_10440 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D DKZ56_10435 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DKZ56_13620 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_04320 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein D DKZ56_04695 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein D DKZ56_04700 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein D DKZ56_04705 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein D DKZ56_04710 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_09145 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein D DKZ56_09150 amino acid ABC transporter permease K17073 lysX1; putative lysine transport system substrate-binding protein D DKZ56_09155 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein D DKZ56_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_03555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_02765 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_03545 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_02770 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_03550 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_02775 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_03535 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_02780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_03560 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_01150 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D DKZ56_12800 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D DKZ56_01155 ABC transporter permease K02072 metI; D-methionine transport system permease protein D DKZ56_12805 ABC transporter permease K02072 metI; D-methionine transport system permease protein D DKZ56_01160 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D DKZ56_12810 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D DKZ56_08695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_13020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_08700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_13025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_08705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_13030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_08710 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_13035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_08715 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_13040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_12955 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D DKZ56_12950 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D DKZ56_12945 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D DKZ56_03635 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D DKZ56_12940 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D DKZ56_12375 adhesin K09815 znuA; zinc transport system substrate-binding protein D DKZ56_08895 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D DKZ56_08890 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DKZ56_09680 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein D DKZ56_09675 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D DKZ56_09685 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DKZ56_09690 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DKZ56_09830 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_11155 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_12915 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_03205 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D DKZ56_03195 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D DKZ56_03200 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D DKZ56_03045 ABC transporter permease K11632 bceB; bacitracin transport system permease protein D DKZ56_03040 ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D DKZ56_05870 ABC transporter permease K19341 nosY; Cu-processing system permease protein D DKZ56_05875 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D DKZ56_05730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D DKZ56_05725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DKZ56_01180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_03485 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_01175 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_03490 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_07855 abc-f; ABC-F type ribosomal protection protein K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:uth03070] D DKZ56_07590 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D DKZ56_11085 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D DKZ56_02950 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DKZ56_13525 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DKZ56_03155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DKZ56_11105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DKZ56_00975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_02375 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_05310 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_05560 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_06880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DKZ56_06890 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DKZ56_00750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D DKZ56_00745 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:uth02020] D DKZ56_11900 PAS domain S-box protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DKZ56_11905 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DKZ56_10450 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DKZ56_05435 flagellin K02406 fliC; flagellin D DKZ56_05500 flagellin K02406 fliC; flagellin D DKZ56_05645 flagellin K02406 fliC; flagellin D DKZ56_07180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D DKZ56_14895 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D DKZ56_08075 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D DKZ56_08070 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D DKZ56_06420 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D DKZ56_02510 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DKZ56_02505 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR D DKZ56_02360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DKZ56_03035 HAMP domain-containing histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3] D DKZ56_03030 response regulator transcription factor K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR D DKZ56_03040 ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D DKZ56_03045 ABC transporter permease K11632 bceB; bacitracin transport system permease protein D DKZ56_13765 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D DKZ56_13770 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ D DKZ56_13760 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein D DKZ56_13755 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein D DKZ56_08680 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_09965 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW D DKZ56_04780 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D DKZ56_11200 sporulation protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-] D DKZ56_09605 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D DKZ56_08850 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D DKZ56_08845 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR D DKZ56_08485 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D DKZ56_05430 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D DKZ56_14205 comX; competence pheromone ComX K02253 comX; competence protein ComX D DKZ56_14200 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D DKZ56_14195 response regulator transcription factor K07691 comA; two-component system, NarL family, competent response regulator ComA D DKZ56_05355 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D DKZ56_05360 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU D DKZ56_00635 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D DKZ56_00630 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D DKZ56_00640 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D DKZ56_07650 sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D DKZ56_07645 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR D DKZ56_07665 ABC transporter permease K11619 liaI; lia operon protein LiaI D DKZ56_01485 hypothetical protein K11621 liaG; lia operon protein LiaG D DKZ56_07655 hypothetical protein K11622 liaF; lia operon protein LiaF D DKZ56_07715 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D DKZ56_10955 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_08860 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D DKZ56_03270 hydrogenase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D DKZ56_03275 cytochrome-c3 hydrogenase K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D DKZ56_08250 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DKZ56_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00140 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02270 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02830 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_09095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_10015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_13000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_07160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_09765 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_12985 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_07155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DKZ56_04185 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07105 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07150 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DKZ56_06110 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DKZ56_02240 GHKL domain-containing protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D DKZ56_02245 response regulator K07719 glnL; two-component system, response regulator GlnL D DKZ56_00430 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DKZ56_00425 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DKZ56_03810 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D DKZ56_04895 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D DKZ56_05655 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D DKZ56_05400 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D DKZ56_03585 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:uth02024] D DKZ56_13750 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D DKZ56_07480 RNA chaperone Hfq K03666 hfq; host factor-I protein D DKZ56_10430 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DKZ56_10425 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DKZ56_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_03555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_02765 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_03545 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_02770 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_03550 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_02775 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_03535 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_02780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_03560 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_03540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_11685 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_09810 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DKZ56_09815 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DKZ56_08695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_13020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_08700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_13025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_08705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_13030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_08710 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_13035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_08715 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_13040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_03325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DKZ56_05830 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DKZ56_03330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DKZ56_05820 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DKZ56_03335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DKZ56_05825 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DKZ56_03340 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DKZ56_05810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DKZ56_03345 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DKZ56_05815 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DKZ56_00975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_02375 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_14205 comX; competence pheromone ComX K02253 comX; competence protein ComX D DKZ56_14210 polyprenyl synthetase K02251 comQ; competence protein ComQ D DKZ56_14200 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D DKZ56_14195 response regulator transcription factor K07691 comA; two-component system, NarL family, competent response regulator ComA D DKZ56_05695 hypothetical protein K02250 comK; competence protein ComK D DKZ56_11085 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D DKZ56_02950 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DKZ56_13525 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DKZ56_03155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DKZ56_11105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DKZ56_05310 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_05560 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_06880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DKZ56_06890 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DKZ56_05360 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU D DKZ56_04780 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D DKZ56_11200 sporulation protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-] D DKZ56_09605 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:uth02030] D DKZ56_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00140 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02270 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02830 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_09095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_10015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_13000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_08595 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D DKZ56_07155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DKZ56_07160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_09765 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_12985 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_04185 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07105 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07165 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D DKZ56_07150 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DKZ56_06110 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DKZ56_07170 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DKZ56_08250 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DKZ56_07040 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DKZ56_07095 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DKZ56_07100 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D DKZ56_14895 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D DKZ56_14890 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:uth02040] D DKZ56_07030 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DKZ56_07035 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DKZ56_07040 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DKZ56_07045 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D DKZ56_07050 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DKZ56_07055 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DKZ56_07090 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D DKZ56_07095 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DKZ56_07100 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D DKZ56_07110 flagellar protein K02418 fliO; flagellar protein FliO/FliZ D DKZ56_07115 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DKZ56_07120 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DKZ56_07125 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DKZ56_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DKZ56_07130 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DKZ56_07020 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DKZ56_07025 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DKZ56_07070 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D DKZ56_07080 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D DKZ56_04975 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D DKZ56_04980 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D DKZ56_05410 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DKZ56_05415 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D DKZ56_05435 flagellin K02406 fliC; flagellin D DKZ56_05500 flagellin K02406 fliC; flagellin D DKZ56_05645 flagellin K02406 fliC; flagellin D DKZ56_05505 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D DKZ56_05525 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D DKZ56_14895 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D DKZ56_14890 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DKZ56_05400 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D DKZ56_10545 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DKZ56_07180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:uth04980] D DKZ56_04725 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DKZ56_09655 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D DKZ56_09645 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_09650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D DKZ56_00650 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:uth01501] D DKZ56_08695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_13020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_08700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_13025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_08705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_13030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_08710 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_13035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_08715 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_13040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_08725 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D DKZ56_08420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DKZ56_12120 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B C 01502 Vancomycin resistance [PATH:uth01502] D DKZ56_08680 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DKZ56_00940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DKZ56_00890 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DKZ56_00935 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DKZ56_06585 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DKZ56_09120 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_09965 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:uth01503] D DKZ56_03495 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_10080 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_11060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15125 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:uth01000] C 01001 Protein kinases [BR:uth01001] D DKZ56_06800 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DKZ56_00875 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D DKZ56_00860 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DKZ56_01530 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D DKZ56_11900 PAS domain S-box protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DKZ56_08075 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D DKZ56_02510 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DKZ56_03035 HAMP domain-containing histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3] D DKZ56_13765 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D DKZ56_14200 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D DKZ56_05355 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D DKZ56_00635 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D DKZ56_07650 sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D DKZ56_13945 GAF domain-containing sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DKZ56_08850 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D DKZ56_07155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DKZ56_02240 GHKL domain-containing protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:uth01009] D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_06795 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:uth01002] D DKZ56_06685 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D DKZ56_10695 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D DKZ56_03280 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D DKZ56_06630 hypothetical protein K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D DKZ56_00590 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DKZ56_07615 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D DKZ56_05330 peptidoglycan endopeptidase K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-] D DKZ56_00520 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DKZ56_10980 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DKZ56_03620 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DKZ56_10990 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DKZ56_12275 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DKZ56_00260 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D DKZ56_11585 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D DKZ56_00740 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D DKZ56_06085 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D DKZ56_05925 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_08680 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DKZ56_12590 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DKZ56_12255 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DKZ56_01375 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D DKZ56_09760 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D DKZ56_04490 amidohydrolase K01436 yhaA; amidohydrolase [EC:3.5.1.-] D DKZ56_01400 amidohydrolase K14665 amhX; amidohydrolase [EC:3.5.1.-] D DKZ56_01470 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D DKZ56_14920 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DKZ56_14940 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D DKZ56_15095 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D DKZ56_01635 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DKZ56_01910 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DKZ56_07230 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D DKZ56_08685 amino acid amidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D DKZ56_08160 prsW; intramembrane metalloprotease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-] D DKZ56_08675 S58 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D DKZ56_02290 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DKZ56_13640 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DKZ56_11390 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DKZ56_14240 brxL; protease Lon-related BREX system protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DKZ56_06515 PDZ domain-containing protein K07177 K07177; Lon-like protease D DKZ56_07620 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DKZ56_06920 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DKZ56_09790 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DKZ56_05320 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DKZ56_05745 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DKZ56_09110 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DKZ56_12025 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D DKZ56_09600 peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D DKZ56_08720 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DKZ56_14025 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DKZ56_06980 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D DKZ56_09425 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DKZ56_10790 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DKZ56_10795 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DKZ56_11890 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D DKZ56_11895 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:uth01003] D DKZ56_08420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DKZ56_12120 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B D DKZ56_12575 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D DKZ56_04665 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D DKZ56_05670 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D DKZ56_05335 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:uth01005] D DKZ56_04125 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DKZ56_05260 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DKZ56_06335 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D DKZ56_05335 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:uth01011] D DKZ56_04795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DKZ56_01030 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DKZ56_12200 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DKZ56_06590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DKZ56_06465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DKZ56_06045 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7] D DKZ56_00940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DKZ56_00890 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DKZ56_11615 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DKZ56_08720 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DKZ56_14025 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DKZ56_06585 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DKZ56_09120 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DKZ56_01225 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_01095 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D DKZ56_05290 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D DKZ56_08420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DKZ56_12120 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B D DKZ56_12575 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D DKZ56_04665 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D DKZ56_06575 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D DKZ56_06580 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D DKZ56_10455 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A D DKZ56_02290 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DKZ56_08880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DKZ56_08680 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_05330 peptidoglycan endopeptidase K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-] D DKZ56_01470 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D DKZ56_10805 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D DKZ56_08165 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DKZ56_04955 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D DKZ56_03495 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_10080 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_11060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15125 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:uth01004] D DKZ56_06855 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DKZ56_05895 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DKZ56_14190 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DKZ56_05900 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DKZ56_02120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_06860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_07375 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DKZ56_04990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DKZ56_08105 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DKZ56_00640 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D DKZ56_12030 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_12155 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DKZ56_10945 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D DKZ56_03540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_11685 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_09025 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D DKZ56_10885 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D DKZ56_06850 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DKZ56_10315 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DKZ56_03805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:uth01008] D DKZ56_03750 type III polyketide synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase D DKZ56_03745 isoprenylcysteine carboxyl methyltransferase K16168 bpsB; methyltransferase D DKZ56_14950 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:uth01006] D DKZ56_09575 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DKZ56_08230 heptaprenyl diphosphate synthase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30] D DKZ56_08240 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D DKZ56_07215 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DKZ56_08505 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DKZ56_07475 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DKZ56_01165 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D DKZ56_04145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:uth01007] D DKZ56_02915 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D DKZ56_12115 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DKZ56_05905 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DKZ56_02920 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DKZ56_04685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DKZ56_02055 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DKZ56_06675 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DKZ56_11330 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DKZ56_12310 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DKZ56_01860 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DKZ56_11050 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DKZ56_11055 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DKZ56_10565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D DKZ56_02275 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DKZ56_07235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_10020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_11845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DKZ56_10830 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DKZ56_11755 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DKZ56_11750 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DKZ56_08390 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DKZ56_04295 pyridoxal phosphate-dependent aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D DKZ56_09245 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DKZ56_10970 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DKZ56_03955 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D DKZ56_08270 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DKZ56_04260 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D DKZ56_12555 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DKZ56_01575 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D DKZ56_12135 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DKZ56_12910 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DKZ56_11345 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DKZ56_14670 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DKZ56_12250 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DKZ56_04115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DKZ56_14115 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DKZ56_10040 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DKZ56_09465 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00199 Cytochrome P450 [BR:uth00199] D DKZ56_04605 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4] C 00194 Photosynthesis proteins [BR:uth00194] D DKZ56_04940 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DKZ56_04935 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DKZ56_04930 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DKZ56_04925 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DKZ56_04920 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DKZ56_04915 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DKZ56_04910 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DKZ56_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DKZ56_04900 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:uth03000] D DKZ56_12795 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D DKZ56_04965 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D DKZ56_10560 transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D DKZ56_08570 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DKZ56_12175 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DKZ56_02625 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DKZ56_02285 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DKZ56_11680 TetR/AcrR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D DKZ56_11620 response regulator transcription factor K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D DKZ56_13850 HTH-type transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D DKZ56_06075 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D DKZ56_07520 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D DKZ56_05225 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D DKZ56_07955 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DKZ56_08900 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D DKZ56_14655 perR; peroxide-responsive transcriptional repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D DKZ56_01540 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DKZ56_14690 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DKZ56_09865 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D DKZ56_11025 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D DKZ56_05080 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DKZ56_01270 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D DKZ56_11220 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D DKZ56_00705 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D DKZ56_08110 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DKZ56_01015 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D DKZ56_08350 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DKZ56_02015 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D DKZ56_00045 PAS domain S-box protein K06714 rocR; arginine utilization regulatory protein D DKZ56_00755 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D DKZ56_06990 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D DKZ56_08410 transcriptional regulator K07729 K07729; putative transcriptional regulator D DKZ56_00885 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D DKZ56_04215 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D DKZ56_05240 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D DKZ56_09455 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D DKZ56_02060 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D DKZ56_01965 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D DKZ56_02400 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DKZ56_02410 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DKZ56_09590 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D DKZ56_10675 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DKZ56_01465 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D DKZ56_01460 tenI; thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D DKZ56_02875 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D DKZ56_08225 mtrB; trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D DKZ56_06695 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DKZ56_04635 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator D DKZ56_06540 transcriptional regulator K06314 rsfA; prespore-specific regulator D DKZ56_11860 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DKZ56_05695 hypothetical protein K02250 comK; competence protein ComK D DKZ56_06560 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:uth03021] D DKZ56_03185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DKZ56_02985 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DKZ56_02990 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DKZ56_04765 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D DKZ56_06760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DKZ56_10545 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DKZ56_03590 sigW; RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DKZ56_08080 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DKZ56_08525 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DKZ56_00855 sigB; RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor D DKZ56_06635 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D DKZ56_06640 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D DKZ56_08010 SigB/SigF/SigG family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D DKZ56_10770 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D DKZ56_02940 sigH; RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor D DKZ56_07180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D DKZ56_07250 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D DKZ56_09555 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D DKZ56_02955 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D DKZ56_00875 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D DKZ56_00870 phosphoserine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DKZ56_00865 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DKZ56_00860 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DKZ56_10785 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D DKZ56_04805 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:uth03019] D DKZ56_06870 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DKZ56_06210 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D DKZ56_07345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D DKZ56_07410 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D DKZ56_13515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DKZ56_13875 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D DKZ56_00925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DKZ56_08870 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D DKZ56_08140 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DKZ56_07295 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DKZ56_04805 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DKZ56_11945 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DKZ56_10665 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DKZ56_00730 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DKZ56_07480 RNA chaperone Hfq K03666 hfq; host factor-I protein D DKZ56_06120 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D DKZ56_05430 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D DKZ56_13660 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:uth03011] D DKZ56_08185 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DKZ56_07195 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DKZ56_03085 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DKZ56_12065 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DKZ56_03140 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DKZ56_02460 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DKZ56_03005 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DKZ56_03125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DKZ56_03220 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DKZ56_03050 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DKZ56_03180 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DKZ56_03000 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DKZ56_03175 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DKZ56_03120 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DKZ56_07290 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DKZ56_06895 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DKZ56_03100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DKZ56_02470 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DKZ56_03075 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DKZ56_10700 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DKZ56_10635 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DKZ56_02965 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DKZ56_03070 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DKZ56_03055 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DKZ56_03060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DKZ56_03115 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DKZ56_03130 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DKZ56_02485 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DKZ56_02970 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DKZ56_02960 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DKZ56_02975 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DKZ56_03215 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DKZ56_03105 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DKZ56_03150 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DKZ56_03090 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DKZ56_03190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DKZ56_03135 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DKZ56_06915 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DKZ56_11830 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DKZ56_11265 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DKZ56_03080 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DKZ56_03065 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DKZ56_03110 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DKZ56_11255 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DKZ56_06825 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DKZ56_03095 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DKZ56_03145 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DKZ56_04810 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DKZ56_06530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DKZ56_02945 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DKZ56_10400 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DKZ56_02365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DKZ56_11835 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DKZ56_03170 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DKZ56_01985 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D DKZ56_02995 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A C 03009 Ribosome biogenesis [BR:uth03009] D DKZ56_06870 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DKZ56_10580 GTPase Era K03595 era; GTPase D DKZ56_11195 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D DKZ56_07250 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D DKZ56_09555 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D DKZ56_02955 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D DKZ56_12265 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D DKZ56_02035 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DKZ56_06785 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D DKZ56_02980 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D DKZ56_06500 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D DKZ56_10650 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D DKZ56_02395 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DKZ56_06565 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DKZ56_02065 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DKZ56_09585 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D DKZ56_02930 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D DKZ56_02540 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D DKZ56_06790 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D DKZ56_00415 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D DKZ56_08050 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D DKZ56_05975 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DKZ56_06690 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DKZ56_13960 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DKZ56_00770 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D DKZ56_14905 N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D DKZ56_06905 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D DKZ56_10655 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D DKZ56_10820 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D DKZ56_02925 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D DKZ56_00925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D DKZ56_08870 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D DKZ56_06805 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DKZ56_08190 ribosome biogenesis GTPase Der K03977 engA; GTPase D DKZ56_06925 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D DKZ56_01125 hflX; GTPase HflX K03665 hflX; GTPase D DKZ56_10760 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase D DKZ56_04840 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DKZ56_11070 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DKZ56_07275 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D DKZ56_07245 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D DKZ56_02350 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein D DKZ56_10735 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D DKZ56_10595 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D DKZ56_10750 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D DKZ56_05545 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D DKZ56_02450 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D DKZ56_06525 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:uth03016] D DKZ56_09840 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D DKZ56_08345 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D DKZ56_07235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_10020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DKZ56_06675 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DKZ56_12310 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DKZ56_02055 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DKZ56_04685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DKZ56_01860 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DKZ56_11050 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DKZ56_10830 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DKZ56_10565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D DKZ56_11845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DKZ56_02275 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DKZ56_02920 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DKZ56_11330 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DKZ56_11055 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DKZ56_11755 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DKZ56_11750 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DKZ56_12115 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DKZ56_05905 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DKZ56_11065 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D DKZ56_13835 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DKZ56_12240 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D DKZ56_03210 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DKZ56_07280 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D DKZ56_11020 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_11775 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12045 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_04840 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DKZ56_07475 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DKZ56_02385 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DKZ56_02390 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DKZ56_02370 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D DKZ56_11610 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D DKZ56_01295 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D DKZ56_02915 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D DKZ56_04245 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D DKZ56_02265 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D DKZ56_01870 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DKZ56_07440 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D DKZ56_10645 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D DKZ56_06970 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DKZ56_06910 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D DKZ56_10530 tRNA (adenine-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D DKZ56_14005 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D DKZ56_11770 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D DKZ56_11015 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DKZ56_14400 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DKZ56_14535 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D DKZ56_13065 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D DKZ56_12620 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D DKZ56_11115 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D DKZ56_14445 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DKZ56_14440 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DKZ56_14435 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DKZ56_14450 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DKZ56_14010 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D DKZ56_11110 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DKZ56_12040 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D DKZ56_01920 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DKZ56_00775 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D DKZ56_00765 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D DKZ56_00780 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D DKZ56_11040 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D DKZ56_06520 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D DKZ56_13515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DKZ56_07295 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:uth03012] D DKZ56_07265 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DKZ56_11840 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DKZ56_00760 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D DKZ56_07200 elongation factor Ts K02357 tsf; elongation factor Ts D DKZ56_03015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DKZ56_03010 fusA; elongation factor G K02355 fusA; elongation factor G D DKZ56_04825 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D DKZ56_07210 ribosome recycling factor K02838 frr; ribosome recycling factor D DKZ56_04830 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D DKZ56_01980 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D DKZ56_03165 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D DKZ56_09495 efp; elongation factor P K02356 efp; elongation factor P D DKZ56_05565 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D DKZ56_06050 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:uth03110] D DKZ56_04290 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DKZ56_05885 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DKZ56_02890 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D DKZ56_11395 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DKZ56_06985 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D DKZ56_10665 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DKZ56_00730 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DKZ56_10660 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D DKZ56_01900 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D DKZ56_10670 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D DKZ56_15165 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D DKZ56_00735 co-chaperone GroES K04078 groES; chaperonin GroES D DKZ56_01635 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DKZ56_01910 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DKZ56_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DKZ56_03260 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D DKZ56_03265 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D DKZ56_12570 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D DKZ56_03675 foldase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D DKZ56_13870 foldase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D DKZ56_11660 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:uth04131] D DKZ56_08245 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DKZ56_13605 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DKZ56_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:uth03032] D DKZ56_08520 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DKZ56_09990 reverse transcriptase-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DKZ56_08215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DKZ56_02360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DKZ56_02490 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DKZ56_13195 AAA family ATPase K02315 dnaC; DNA replication protein DnaC D DKZ56_10550 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DKZ56_11855 helicase DnaB K03346 dnaB; replication initiation and membrane attachment protein D DKZ56_11850 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_11965 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DKZ56_07240 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D DKZ56_02355 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DKZ56_10705 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DKZ56_02090 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DKZ56_02185 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DKZ56_06935 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DKZ56_11715 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DKZ56_12875 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-] D DKZ56_03915 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03925 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03935 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_02335 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DKZ56_02340 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DKZ56_10325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DKZ56_10320 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DKZ56_06965 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DKZ56_04235 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D DKZ56_08795 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:uth03036] D DKZ56_06870 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DKZ56_08215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DKZ56_02360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DKZ56_12365 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D DKZ56_07480 RNA chaperone Hfq K03666 hfq; host factor-I protein D DKZ56_06875 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D DKZ56_08035 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D DKZ56_08040 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D DKZ56_06620 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DKZ56_01935 septum formation initiator K13052 divIC; cell division protein DivIC D DKZ56_05725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DKZ56_07350 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DKZ56_12205 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DKZ56_06570 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D DKZ56_06600 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D DKZ56_06410 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DKZ56_06595 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DKZ56_05730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D DKZ56_06625 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DKZ56_11710 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D DKZ56_03495 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_10080 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_11060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15125 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_15140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DKZ56_12050 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator D DKZ56_11285 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DKZ56_11280 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DKZ56_06670 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D DKZ56_06655 cell division protein SepF K09772 sepF; cell division inhibitor SepF D DKZ56_04970 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_11300 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_11295 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D DKZ56_11290 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D DKZ56_00950 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D DKZ56_02405 ParA family protein K03496 parA; chromosome partitioning protein D DKZ56_02400 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DKZ56_02410 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DKZ56_10325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DKZ56_10320 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DKZ56_02390 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DKZ56_02395 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DKZ56_06970 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DKZ56_06975 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D DKZ56_07980 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D DKZ56_01955 nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D DKZ56_03500 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DKZ56_11385 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D DKZ56_13650 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:uth03400] D DKZ56_04470 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DKZ56_14740 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DKZ56_08400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DKZ56_12355 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DKZ56_13665 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DKZ56_09780 methylated-DNA--[protein]-cysteine S-methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DKZ56_11875 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DKZ56_01025 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DKZ56_08875 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DKZ56_11080 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DKZ56_00465 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DKZ56_11880 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DKZ56_05710 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D DKZ56_05705 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D DKZ56_11655 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D DKZ56_00470 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DKZ56_02985 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DKZ56_02990 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DKZ56_03185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DKZ56_04765 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D DKZ56_06760 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DKZ56_01970 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DKZ56_07455 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DKZ56_11695 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D DKZ56_07460 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D DKZ56_09565 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DKZ56_09570 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DKZ56_11965 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DKZ56_07240 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D DKZ56_02355 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DKZ56_10705 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DKZ56_02090 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DKZ56_02185 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_03915 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03925 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03935 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_11000 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DKZ56_07405 recA; recombinase RecA K03553 recA; recombination protein RecA D DKZ56_11125 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DKZ56_11120 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DKZ56_06770 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DKZ56_14930 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D DKZ56_14935 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D DKZ56_02895 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D DKZ56_02345 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D DKZ56_06840 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DKZ56_13475 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DKZ56_10575 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DKZ56_02175 recR; recombination protein RecR K06187 recR; recombination protein RecR D DKZ56_09595 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D DKZ56_08425 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U D DKZ56_05785 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D DKZ56_05780 addB; helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D DKZ56_07925 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D DKZ56_00690 Ku protein K10979 ku; DNA end-binding protein Ku D DKZ56_00695 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D DKZ56_02335 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DKZ56_02340 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DKZ56_06965 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DKZ56_08215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DKZ56_13185 recombinase RecT K07455 recT; recombination protein RecT D DKZ56_08140 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DKZ56_09835 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D DKZ56_04365 UV damage repair protein UvrX K03502 umuC; DNA polymerase V D DKZ56_07620 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DKZ56_14760 recX; recombination regulator RecX K03565 recX; regulatory protein D DKZ56_11700 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X) D DKZ56_02115 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D DKZ56_08380 dinG; ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D DKZ56_03655 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_09350 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DKZ56_03665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DKZ56_11970 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:uth03029] D DKZ56_07265 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DKZ56_11840 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DKZ56_07200 elongation factor Ts K02357 tsf; elongation factor Ts D DKZ56_03015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DKZ56_03010 fusA; elongation factor G K02355 fusA; elongation factor G D DKZ56_10580 GTPase Era K03595 era; GTPase D DKZ56_12115 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DKZ56_12310 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DKZ56_11050 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DKZ56_10565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D DKZ56_04685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DKZ56_00450 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DKZ56_00445 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DKZ56_00455 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DKZ56_02465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_13215 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DKZ56_10665 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DKZ56_10670 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D DKZ56_00730 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DKZ56_00735 co-chaperone GroES K04078 groES; chaperonin GroES D DKZ56_10660 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D DKZ56_11020 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_11775 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12045 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_03500 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DKZ56_04145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DKZ56_06420 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D DKZ56_00975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_02375 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_10125 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:uth02000] D DKZ56_14730 ABC transporter ATP-binding protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-] D DKZ56_01180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_03485 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_01175 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_03490 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D DKZ56_10940 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DKZ56_07855 abc-f; ABC-F type ribosomal protection protein K18231 msr; macrolide transport system ATP-binding/permease protein D DKZ56_08760 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D DKZ56_12705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DKZ56_12700 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DKZ56_12695 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DKZ56_12690 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DKZ56_14035 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DKZ56_14040 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D DKZ56_14705 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D DKZ56_14700 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D DKZ56_03365 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_14695 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DKZ56_06165 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D DKZ56_06170 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D DKZ56_06175 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D DKZ56_06180 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D DKZ56_03780 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DKZ56_03775 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D DKZ56_03770 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DKZ56_03370 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D DKZ56_06330 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D DKZ56_03375 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DKZ56_06390 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DKZ56_06385 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DKZ56_14030 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DKZ56_08595 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D DKZ56_08590 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D DKZ56_08585 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DKZ56_09410 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D DKZ56_09400 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D DKZ56_09405 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D DKZ56_09395 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D DKZ56_10450 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DKZ56_10445 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D DKZ56_10440 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D DKZ56_10435 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DKZ56_13620 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_04320 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein D DKZ56_04695 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein D DKZ56_04700 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein D DKZ56_04705 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein D DKZ56_04710 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_03555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DKZ56_02765 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_03545 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DKZ56_02770 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_03550 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DKZ56_02775 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_03535 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DKZ56_02780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_03560 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DKZ56_01150 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D DKZ56_12800 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D DKZ56_01155 ABC transporter permease K02072 metI; D-methionine transport system permease protein D DKZ56_12805 ABC transporter permease K02072 metI; D-methionine transport system permease protein D DKZ56_01160 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D DKZ56_12810 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D DKZ56_04415 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D DKZ56_04420 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D DKZ56_04425 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D DKZ56_09145 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein D DKZ56_09150 amino acid ABC transporter permease K17073 lysX1; putative lysine transport system substrate-binding protein D DKZ56_09155 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein D DKZ56_04050 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DKZ56_11555 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DKZ56_13630 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DKZ56_04035 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D DKZ56_04040 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D DKZ56_11560 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D DKZ56_13625 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D DKZ56_04045 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_11565 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DKZ56_08695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_13020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DKZ56_08700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_13025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D DKZ56_08705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_13030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D DKZ56_08710 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_13035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DKZ56_08715 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_13040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D DKZ56_03325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DKZ56_05830 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DKZ56_03330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DKZ56_05820 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DKZ56_03335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DKZ56_05825 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DKZ56_03340 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DKZ56_05810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DKZ56_03345 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DKZ56_05815 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DKZ56_12955 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D DKZ56_12950 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D DKZ56_12945 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D DKZ56_03635 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D DKZ56_12940 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D DKZ56_01100 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D DKZ56_01110 iron ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein D DKZ56_01115 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D DKZ56_01105 ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D DKZ56_03380 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D DKZ56_09785 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D DKZ56_03645 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D DKZ56_07970 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D DKZ56_08905 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D DKZ56_03640 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D DKZ56_04715 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D DKZ56_04720 ATP-binding cassette domain-containing protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D DKZ56_12375 adhesin K09815 znuA; zinc transport system substrate-binding protein D DKZ56_08895 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D DKZ56_08890 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DKZ56_09680 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein D DKZ56_09685 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D DKZ56_09675 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D DKZ56_09690 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DKZ56_09830 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_11155 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_12915 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D DKZ56_03205 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D DKZ56_03195 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D DKZ56_03200 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D DKZ56_05870 ABC transporter permease K19341 nosY; Cu-processing system permease protein D DKZ56_05875 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D DKZ56_03045 ABC transporter permease K11632 bceB; bacitracin transport system permease protein D DKZ56_03040 ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D DKZ56_13755 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein D DKZ56_13760 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein D DKZ56_05730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D DKZ56_05725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DKZ56_13825 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein D DKZ56_13830 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D DKZ56_00155 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D DKZ56_02215 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D DKZ56_07305 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D DKZ56_00160 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DKZ56_00390 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DKZ56_02220 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DKZ56_07310 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DKZ56_12785 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D DKZ56_14790 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D DKZ56_01620 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D DKZ56_06155 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D DKZ56_01560 MFS transporter K19578 bmr; MFS transporter, DHA1 family, multidrug resistance protein D DKZ56_03720 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D DKZ56_03715 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D DKZ56_01075 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D DKZ56_07720 ammonium transporter K03320 amt; ammonium transporter, Amt family D DKZ56_10950 ammonium transporter K03320 amt; ammonium transporter, Amt family D DKZ56_04520 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D DKZ56_02425 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D DKZ56_05980 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D DKZ56_14895 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D DKZ56_14890 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DKZ56_04555 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D DKZ56_14470 CrcB family protein K06199 crcB; fluoride exporter D DKZ56_14475 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D DKZ56_13930 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D DKZ56_06260 CidA/LrgA family protein K06518 cidA; holin-like protein D DKZ56_06270 CidA/LrgA family protein K06518 cidA; holin-like protein D DKZ56_01615 amino acid permease K11733 lysP; lysine-specific permease D DKZ56_07775 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D DKZ56_08640 spore gernimation protein K06311 yndE; spore germination protein D DKZ56_00175 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D DKZ56_00700 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D DKZ56_01090 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D DKZ56_01305 multidrug efflux SMR transporter K18924 ykkC; paired small multidrug resistance pump D DKZ56_01300 multidrug efflux SMR transporter K18925 ykkD; paired small multidrug resistance pump D DKZ56_01335 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family D DKZ56_10085 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D DKZ56_02630 L-lactate permease K03303 lutP; lactate permease D DKZ56_01130 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D DKZ56_04445 cation acetate symporter K14393 actP; cation/acetate symporter D DKZ56_10350 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter D DKZ56_02250 gltP; glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein D DKZ56_08860 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D DKZ56_15075 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D DKZ56_10010 cation:proton antiporter K26730 napA; Na+:H+ antiporter D DKZ56_06065 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D DKZ56_06200 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D DKZ56_06700 uracil permease K02824 uraA; uracil permease D DKZ56_01600 purine permease K16169 pbuX; xanthine permease D DKZ56_00585 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D DKZ56_07710 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D DKZ56_13050 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D DKZ56_03865 chromate transporter K07240 chrA; chromate transporter D DKZ56_03870 chromate transporter K07240 chrA; chromate transporter D DKZ56_05165 chrA; chromate efflux transporter K07240 chrA; chromate transporter D DKZ56_09430 chromate transporter K07240 chrA; chromate transporter D DKZ56_09435 chromate transporter K07240 chrA; chromate transporter D DKZ56_07995 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D DKZ56_08815 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D DKZ56_00105 arsenic transporter K03893 arsB; arsenical pump membrane protein D DKZ56_15060 arsenic transporter K03893 arsB; arsenical pump membrane protein D DKZ56_05070 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D DKZ56_01695 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D DKZ56_01690 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D DKZ56_01685 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D DKZ56_01680 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DKZ56_01675 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D DKZ56_01670 Na(+)/H(+) antiporter subunit F1 K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D DKZ56_01665 Na+/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D DKZ56_11095 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D DKZ56_05290 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D DKZ56_01640 AEC family transporter K24180 mleP; malate permease and related proteins D DKZ56_02665 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D DKZ56_05765 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D DKZ56_02660 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D DKZ56_05760 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D DKZ56_08090 ECF transporter S component K23675 fmnP; riboflavin transporter D DKZ56_14925 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter D DKZ56_06410 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DKZ56_06595 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DKZ56_04845 hypothetical protein K23242 mntP; manganese efflux pump family protein D DKZ56_01040 transporter K07243 FTR; high-affinity iron transporter D DKZ56_10095 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D DKZ56_05195 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein D DKZ56_11460 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D DKZ56_11455 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D DKZ56_00020 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DKZ56_09445 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:uth02044] D DKZ56_07590 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D DKZ56_07575 type II secretion system protein GspE K02652 pilB; type IV pilus assembly protein PilB D DKZ56_07585 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D DKZ56_07595 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D DKZ56_07580 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D DKZ56_06660 YggT family protein K02221 yggT; YggT family protein D DKZ56_10725 comEA protein K02237 comEA; competence protein ComEA D DKZ56_10720 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DKZ56_10715 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D DKZ56_05385 DEAD/DEAH box helicase K02240 comFA; competence protein ComFA D DKZ56_01020 competence protein ComFB K02241 comFB; competence protein ComFB D DKZ56_05390 ComF family protein K02242 comFC; competence protein ComFC D DKZ56_09285 competence protein ComG K02243 comGA; competence protein ComGA D DKZ56_09290 chromosome partitioning protein ParA K02244 comGB; competence protein ComGB D DKZ56_09295 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC D DKZ56_09300 prepilin-type N-terminal cleavage/methylation domain-containing protein K02246 comGD; competence protein ComGD D DKZ56_09310 hypothetical protein K02248 comGF; competence protein ComGF D DKZ56_07610 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DKZ56_05695 hypothetical protein K02250 comK; competence protein ComK D DKZ56_14210 polyprenyl synthetase K02251 comQ; competence protein ComQ D DKZ56_14205 comX; competence pheromone ComX K02253 comX; competence protein ComX D DKZ56_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DKZ56_07130 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DKZ56_06945 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D DKZ56_07035 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DKZ56_07045 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D DKZ56_07050 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DKZ56_07100 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D DKZ56_07110 flagellar protein K02418 fliO; flagellar protein FliO/FliZ D DKZ56_07115 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DKZ56_07120 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DKZ56_07125 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DKZ56_05310 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_05560 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DKZ56_11085 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D DKZ56_02950 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DKZ56_13525 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DKZ56_03155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DKZ56_06890 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DKZ56_06880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DKZ56_11105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DKZ56_00975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_02375 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DKZ56_00750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D DKZ56_00745 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:uth02042] D DKZ56_13930 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D DKZ56_07755 hemolysin D K11068 hlyIII; hemolysin III D DKZ56_09055 hemolysin D K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:uth02022] D DKZ56_11900 PAS domain S-box protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DKZ56_11905 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DKZ56_08075 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D DKZ56_08070 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D DKZ56_02510 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D DKZ56_02505 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR D DKZ56_03035 HAMP domain-containing histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3] D DKZ56_03030 response regulator transcription factor K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR D DKZ56_13765 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D DKZ56_13770 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ D DKZ56_14200 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D DKZ56_14195 response regulator transcription factor K07691 comA; two-component system, NarL family, competent response regulator ComA D DKZ56_05355 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D DKZ56_05360 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU D DKZ56_00635 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D DKZ56_00630 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D DKZ56_07650 sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D DKZ56_07645 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR D DKZ56_13945 GAF domain-containing sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DKZ56_04780 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D DKZ56_09605 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D DKZ56_08850 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D DKZ56_08845 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR D DKZ56_07155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DKZ56_04185 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07105 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07150 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DKZ56_06110 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DKZ56_02240 GHKL domain-containing protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D DKZ56_02245 response regulator K07719 glnL; two-component system, response regulator GlnL C 02035 Bacterial motility proteins [BR:uth02035] D DKZ56_07155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DKZ56_07160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_09765 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_12985 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DKZ56_07165 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D DKZ56_07170 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DKZ56_08250 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DKZ56_07150 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DKZ56_04185 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_07105 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DKZ56_06110 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DKZ56_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00140 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_00185 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02270 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02830 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_04855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_09095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_10015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_13000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DKZ56_02860 globin-coupled sensor protein K06595 hemAT; heam-based aerotactic trancducer D DKZ56_04535 hypothetical protein K06595 hemAT; heam-based aerotactic trancducer D DKZ56_07045 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D DKZ56_07050 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DKZ56_07055 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DKZ56_07110 flagellar protein K02418 fliO; flagellar protein FliO/FliZ D DKZ56_07115 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DKZ56_07120 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DKZ56_07125 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DKZ56_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DKZ56_07130 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DKZ56_07040 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DKZ56_07095 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DKZ56_07100 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D DKZ56_07035 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DKZ56_07090 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D DKZ56_07030 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DKZ56_07020 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DKZ56_07025 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DKZ56_07070 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D DKZ56_04975 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D DKZ56_04980 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D DKZ56_07080 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D DKZ56_05410 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DKZ56_05415 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D DKZ56_05435 flagellin K02406 fliC; flagellin D DKZ56_05500 flagellin K02406 fliC; flagellin D DKZ56_05645 flagellin K02406 fliC; flagellin D DKZ56_05505 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D DKZ56_05525 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D DKZ56_07180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D DKZ56_14895 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D DKZ56_14890 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D DKZ56_05425 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D DKZ56_05400 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D DKZ56_05510 flagellar biosynthesis protein FlaG K06603 flaG; flagellar protein FlaG D DKZ56_07140 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D DKZ56_07145 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D DKZ56_07580 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D DKZ56_07575 type II secretion system protein GspE K02652 pilB; type IV pilus assembly protein PilB D DKZ56_07585 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D DKZ56_07595 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:uth04812] D DKZ56_04970 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_11300 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_06625 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DKZ56_06620 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DKZ56_11285 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DKZ56_11280 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DKZ56_02405 ParA family protein K03496 parA; chromosome partitioning protein D DKZ56_02400 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DKZ56_02410 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:uth04147] D DKZ56_13585 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DKZ56_13605 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DKZ56_13600 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DKZ56_11940 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DKZ56_06190 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D DKZ56_00730 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DKZ56_10665 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DKZ56_02295 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DKZ56_03015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DKZ56_13835 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DKZ56_03540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_11685 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DKZ56_04735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_07765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_11165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DKZ56_03160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DKZ56_11075 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DKZ56_01720 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_09880 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DKZ56_09875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DKZ56_09545 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DKZ56_07525 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_10960 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DKZ56_11350 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DKZ56_13890 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DKZ56_00505 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DKZ56_04285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_06245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_08375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_09625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DKZ56_11665 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D DKZ56_13595 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:uth02048] D DKZ56_07925 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D DKZ56_07930 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D DKZ56_07900 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D DKZ56_07920 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DKZ56_07910 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D DKZ56_07915 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D DKZ56_07905 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D DKZ56_00330 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DKZ56_00345 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DKZ56_07805 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DKZ56_00335 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DKZ56_07800 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DKZ56_03915 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03925 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_03935 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DKZ56_12010 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D DKZ56_05585 DNA methylase K00590 E2.1.1.113; site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113] D DKZ56_00880 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D DKZ56_04675 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D DKZ56_08995 toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D DKZ56_08990 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D DKZ56_00885 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D DKZ56_14250 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D DKZ56_06625 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DKZ56_04970 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_11300 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DKZ56_10325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DKZ56_10320 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DKZ56_11020 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_11775 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DKZ56_12045 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:uth01504] D DKZ56_07855 abc-f; ABC-F type ribosomal protection protein K18231 msr; macrolide transport system ATP-binding/permease protein D DKZ56_03720 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D DKZ56_08725 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D DKZ56_00970 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D DKZ56_09965 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW D DKZ56_08680 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:uth03100] D DKZ56_12435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DKZ56_01320 aldo/keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D DKZ56_00030 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D DKZ56_04280 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D DKZ56_04275 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D DKZ56_04745 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D DKZ56_14845 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D DKZ56_14480 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DKZ56_06285 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DKZ56_01050 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DKZ56_02685 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D DKZ56_08155 ypdA; YpdA family putative bacillithiol disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D DKZ56_09070 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DKZ56_09230 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DKZ56_09075 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D DKZ56_02650 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D DKZ56_14665 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DKZ56_12015 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DKZ56_02690 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D DKZ56_09860 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D DKZ56_05230 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D DKZ56_01480 multicopper oxidase family protein K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3] D DKZ56_00075 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D DKZ56_05065 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D DKZ56_02110 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D DKZ56_03700 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D DKZ56_12160 GNAT family N-acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-] D DKZ56_00645 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D DKZ56_08340 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D DKZ56_13730 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DKZ56_00215 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D DKZ56_06835 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D DKZ56_10555 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D DKZ56_15000 sensor domain-containing diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D DKZ56_03600 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D DKZ56_04130 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D DKZ56_05265 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D DKZ56_08005 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D DKZ56_13735 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D DKZ56_02885 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D DKZ56_00675 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D DKZ56_13520 abhydrolase domain-containing 18 K03928 yvaK; carboxylesterase [EC:3.1.1.1] D DKZ56_10240 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DKZ56_11625 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DKZ56_12990 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DKZ56_01925 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D DKZ56_10765 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D DKZ56_02480 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D DKZ56_10600 HD family phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D DKZ56_02050 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DKZ56_15100 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DKZ56_02040 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D DKZ56_00715 LysM peptidoglycan-binding domain-containing protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D DKZ56_02745 LysM peptidoglycan-binding domain-containing protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D DKZ56_06225 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DKZ56_06775 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DKZ56_01205 DUF3298 domain-containing protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D DKZ56_14765 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D DKZ56_04455 bshB2; bacillithiol biosynthesis deacetylase BshB2 K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D DKZ56_02010 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D DKZ56_00605 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DKZ56_02205 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DKZ56_04850 low molecular weight protein arginine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D DKZ56_04610 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D DKZ56_04760 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D DKZ56_14955 ATP-grasp domain-containing protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D DKZ56_01265 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D DKZ56_11215 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D DKZ56_14870 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D DKZ56_02705 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D DKZ56_13645 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein D DKZ56_12165 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D DKZ56_12170 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC D DKZ56_02620 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D DKZ56_02615 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D DKZ56_02610 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG D DKZ56_06555 bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase C 99982 Energy metabolism D DKZ56_14090 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D DKZ56_08130 ferredoxin K05337 fer; ferredoxin D DKZ56_10535 cytochrome c K13300 cccA; cytochrome c550 D DKZ56_04860 cytochrome c K12263 cccB; cytochrome c551 D DKZ56_13740 cytochrome c K12263 cccB; cytochrome c551 D DKZ56_12770 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D DKZ56_11670 electron transfer flavoprotein beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D DKZ56_05380 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D DKZ56_05835 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D DKZ56_09060 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D DKZ56_15035 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D DKZ56_06650 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D DKZ56_04505 cell wall hydrolase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D DKZ56_08025 N-acetyltransferase K02859 ribT; riboflavin biosynthesis RibT protein D DKZ56_12880 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein D DKZ56_14055 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D DKZ56_07885 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein D DKZ56_07895 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase D DKZ56_10515 esterase K06999 K06999; phospholipase/carboxylesterase D DKZ56_04000 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin D DKZ56_09660 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin B B 09192 Unclassified: genetic information processing C 99973 Transcription D DKZ56_09195 cold-shock protein K03704 cspA; cold shock protein D DKZ56_04170 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx D DKZ56_05910 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx D DKZ56_00850 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D DKZ56_12545 yugI; general stress protein 13 K07570 GSP13; general stress protein 13 D DKZ56_01930 RNA-binding protein S1 K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D DKZ56_02880 nucleotide excision repair protein K19411 mcsA; protein arginine kinase activator D DKZ56_11400 trigger factor K03545 tig; trigger factor D DKZ56_13510 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D DKZ56_03305 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D DKZ56_03310 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D DKZ56_03315 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D DKZ56_03320 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D DKZ56_08060 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D DKZ56_05915 mecA; adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D DKZ56_01625 restriction endonuclease K07449 K07449; similar to archaeal holliday junction resolvase and Mrr protein D DKZ56_11305 JAB domain-containing protein K03630 radC; DNA repair protein RadC D DKZ56_02070 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D DKZ56_06960 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D DKZ56_08395 DnaD domain protein K02086 dnaD; DNA replication protein D DKZ56_13270 terminase small subunit K07474 xtmA; phage terminase small subunit D DKZ56_13275 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D DKZ56_12820 hypothetical protein K07476 yusF; toprim domain protein D DKZ56_11030 replication-associated recombination protein A K07478 ycaJ; putative ATPase D DKZ56_00795 transposase K07484 K07484; transposase D DKZ56_01775 transposase K07484 K07484; transposase D DKZ56_03450 transposase K07484 K07484; transposase D DKZ56_10340 transposase K07484 K07484; transposase D DKZ56_12420 transposase K07484 K07484; transposase D DKZ56_05135 IS66 family transposase K07484 K07484; transposase D DKZ56_11490 IS66 family transposase K07484 K07484; transposase D DKZ56_02105 ISL3 family transposase K07485 K07485; transposase D DKZ56_10460 ISL3 family transposase K07485 K07485; transposase D DKZ56_13090 ISL3 family transposase K07485 K07485; transposase D DKZ56_13980 hypothetical protein K07487 K07487; transposase D DKZ56_13465 IS256 family transposase K07493 K07493; putative transposase D DKZ56_02145 transposase K07496 K07496; putative transposase D DKZ56_04315 transposase K07496 K07496; putative transposase D DKZ56_04515 transposase K07496 K07496; putative transposase D DKZ56_05675 transposase K07496 K07496; putative transposase D DKZ56_07355 transposase K07496 K07496; putative transposase D DKZ56_14215 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D DKZ56_02180 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D DKZ56_04095 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D DKZ56_01120 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D DKZ56_03835 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D DKZ56_12325 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D DKZ56_05325 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D DKZ56_12965 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D DKZ56_00115 hypothetical protein K06325 cotB; spore coat protein B D DKZ56_10070 hypothetical protein K06327 cotD; spore coat protein D D DKZ56_07450 cotE; outer spore coat protein CotE K06328 cotE; spore coat protein E D DKZ56_00100 spore coat protein K06330 cotH; spore coat protein H D DKZ56_13560 spore coat associated protein CotJA K06332 cotJA; spore coat protein JA D DKZ56_13555 spore coat protein CotJB K06333 cotJB; spore coat protein JB D DKZ56_13550 spore coat protein CotJC K06334 cotJC; spore coat protein JC D DKZ56_05990 spore coat protein CotZ K06343 cotY_Z; CotY/CotZ family spore coat protein D DKZ56_02380 protein jag K06346 jag; spoIIIJ-associated protein D DKZ56_03510 KinB-signaling pathway activation protein K06349 kbaA; KinB signaling pathway activation protein D DKZ56_08615 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI D DKZ56_10845 sporulation protein K06377 spo0M; sporulation-control protein D DKZ56_08000 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D DKZ56_10690 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D DKZ56_04960 M23 family metallopeptidase K06386 spoIIQ; stage II sporulation protein Q D DKZ56_04835 hypothetical protein K06387 spoIIR; stage II sporulation protein R D DKZ56_09520 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH D DKZ56_08210 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D DKZ56_06360 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D DKZ56_06000 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D DKZ56_06005 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D DKZ56_06010 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D DKZ56_08015 spore germination protein K06408 spoVAF; stage V sporulation protein AF D DKZ56_07325 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A D DKZ56_07330 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B D DKZ56_02000 septation protein SpoVG K06412 spoVG; stage V sporulation protein G D DKZ56_15015 SpoVR family protein K06415 spoVR; stage V sporulation protein R D DKZ56_07420 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D DKZ56_12035 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP) D DKZ56_02025 small, acid-soluble spore protein, alpha/beta type K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D DKZ56_11480 small acid-soluble spore protein H K06425 sspH; small acid-soluble spore protein H (minor) D DKZ56_11790 sspI; small acid-soluble spore protein SspI K06426 sspI; small acid-soluble spore protein I (minor) D DKZ56_10935 sspO; small acid-soluble spore protein O K06432 sspO; small acid-soluble spore protein O (minor) D DKZ56_10300 small acid-soluble spore protein Tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein) D DKZ56_10610 stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein D DKZ56_03505 spore gernimation protein K06294 gerD; spore germination protein D D DKZ56_04200 spore germination protein K06295 gerKA; spore germination protein KA D DKZ56_08635 spore germination protein K06295 gerKA; spore germination protein KA D DKZ56_09085 spore germination protein K06295 gerKA; spore germination protein KA D DKZ56_04210 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC D DKZ56_09080 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC D DKZ56_04500 spore coat protein GerQ K06305 gerQ; spore germination protein Q D DKZ56_08170 sporulation protein K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D DKZ56_08670 carbon starvation protein A K06200 cstA; carbon starvation protein D DKZ56_12605 carbon starvation protein A K06200 cstA; carbon starvation protein D DKZ56_06320 typA; translational GTPase TypA K06207 typA; GTP-binding protein D DKZ56_04085 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D DKZ56_10605 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D DKZ56_15025 PrkA family serine protein kinase K07180 prkA; serine protein kinase C 99992 Structural proteins D DKZ56_11365 cytochrome C assembly protein K02497 hemX; HemX protein C 99994 Others D DKZ56_05860 copper-binding protein K07218 nosD; nitrous oxidase accessory protein D DKZ56_05855 hypothetical protein K19342 nosL; copper chaperone NosL D DKZ56_05865 hypothetical protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D DKZ56_05920 hypothetical protein K06198 coiA; competence protein CoiA D DKZ56_08440 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D DKZ56_12210 DUF4479 domain-containing protein K06878 K06878; tRNA-binding protein D DKZ56_05945 globin K06886 glbN; hemoglobin D DKZ56_01565 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D DKZ56_10475 hypothetical protein K07001 K07001; NTE family protein D DKZ56_12765 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D DKZ56_12780 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D DKZ56_14745 metal-dependent hydrolase K07038 K07038; inner membrane protein D DKZ56_14875 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D DKZ56_11935 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D DKZ56_06445 ctaG; cytochrome c oxidase assembly factor CtaG K02862 ctaG; putative membrane protein D DKZ56_00845 SprT family protein K03095 sprL; SprT-like protein D DKZ56_03980 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D DKZ56_06450 DUF420 domain-containing protein K08976 K08976; putative membrane protein D DKZ56_00910 hypothetical protein K08981 K08981; putative membrane protein D DKZ56_05200 SHOCT domain-containing protein K08982 K08982; putative membrane protein D DKZ56_11690 DUF350 domain-containing protein K08989 K08989; putative membrane protein D DKZ56_11600 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D DKZ56_04645 HD domain-containing protein K06885 K06885; uncharacterized protein D DKZ56_05845 esterase K06889 K06889; uncharacterized protein D DKZ56_07760 alpha/beta hydrolase K06889 K06889; uncharacterized protein D DKZ56_14865 L-cystine transporter K06956 K06956; uncharacterized protein D DKZ56_06900 KH domain-containing protein K06960 K06960; uncharacterized protein D DKZ56_02935 hypothetical protein K06962 K06962; uncharacterized protein D DKZ56_08320 zinc metallopeptidase K06973 K06973; uncharacterized protein D DKZ56_01000 N-acetyltransferase K06975 K06975; uncharacterized protein D DKZ56_14185 MMPL family transporter K07003 K07003; uncharacterized protein D DKZ56_04575 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D DKZ56_07745 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D DKZ56_02730 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein D DKZ56_12930 nitroreductase family protein K07078 K07078; uncharacterized protein D DKZ56_01415 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D DKZ56_08830 hypothetical protein K07090 K07090; uncharacterized protein D DKZ56_12680 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DKZ56_13060 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DKZ56_11595 metallophosphoesterase K07095 K07095; uncharacterized protein D DKZ56_01660 metallophosphoesterase K07098 K07098; uncharacterized protein D DKZ56_11140 transcription repressor NadR K07105 K07105; uncharacterized protein D DKZ56_04140 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D DKZ56_09870 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D DKZ56_00665 sel1 repeat family protein K07126 K07126; uncharacterized protein D DKZ56_12315 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D DKZ56_02655 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D DKZ56_05790 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D DKZ56_04250 YitT family protein K07149 K07149; uncharacterized protein D DKZ56_02415 DUF554 domain-containing protein K07150 K07150; uncharacterized protein D DKZ56_12900 DUF554 domain-containing protein K07150 K07150; uncharacterized protein D DKZ56_12370 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D DKZ56_10375 hypothetical protein K09117 K09117; uncharacterized protein D DKZ56_04080 PFL family protein K09157 K09157; uncharacterized protein D DKZ56_11475 DUF2071 domain-containing protein K09166 K09166; uncharacterized protein D DKZ56_00915 hypothetical protein K09167 K09167; uncharacterized protein D DKZ56_02575 YqcI/YcgG family protein K09190 K09190; uncharacterized protein D DKZ56_15070 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein D DKZ56_09610 DUF342 domain-containing protein K09749 K09749; uncharacterized protein D DKZ56_08030 DUF309 domain-containing protein K09763 K09763; uncharacterized protein D DKZ56_07270 DUF503 domain-containing protein K09764 K09764; uncharacterized protein D DKZ56_00245 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein D DKZ56_02095 DUF327 family protein K09770 K09770; uncharacterized protein D DKZ56_12595 divergent PAP2 family protein K09775 K09775; uncharacterized protein D DKZ56_15090 hypothetical protein K09776 K09776; uncharacterized protein D DKZ56_02640 DUF378 domain-containing protein K09779 K09779; uncharacterized protein D DKZ56_15020 yhbH; sporulation protein YhbH K09786 K09786; uncharacterized protein D DKZ56_06885 putative DNA-binding protein K09787 K09787; uncharacterized protein D DKZ56_10485 DUF456 domain-containing protein K09793 K09793; uncharacterized protein D DKZ56_01010 DNA-binding protein K00243 K00243; uncharacterized protein D DKZ56_02870 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein D DKZ56_02795 DUF779 domain-containing protein K09959 K09959; uncharacterized protein D DKZ56_07700 YneF family protein K09976 K09976; uncharacterized protein D DKZ56_09825 hypothetical protein K05967 K05967; uncharacterized protein D DKZ56_10505 hypothetical protein K05967 K05967; uncharacterized protein D DKZ56_08445 exonuclease K07502 yprB; uncharacterized protein D DKZ56_11260 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein D DKZ56_03840 DUF47 domain-containing protein K07220 K07220; uncharacterized protein D DKZ56_14735 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein D DKZ56_07255 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024