+D GENES KO #

  KEGG Orthology (KO) - Vibrio alfacsensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:vaf00010] D D1115_01735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_13945 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D D1115_02570 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D D1115_13975 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1115_10505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_20365 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_02565 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1115_01200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1115_13420 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1115_21305 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D D1115_03055 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D D1115_03060 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D D1115_06885 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_03540 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_10510 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D D1115_14605 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D1115_16370 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_09995 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:vaf00020] D D1115_11030 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D1115_03150 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1115_05100 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1115_11005 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D1115_11000 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1115_10995 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1115_11015 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_11010 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_11025 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1115_11020 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_09315 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_14605 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D1115_03055 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D D1115_03060 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:vaf00030] D D1115_01735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1115_06780 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1115_06785 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D D1115_17420 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D D1115_06790 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D D1115_01685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D1115_02555 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1115_17590 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1115_02610 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D1115_03460 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D D1115_18015 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D D1115_03470 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_11480 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D1115_14855 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D D1115_05505 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_14840 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_15495 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_22245 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_14850 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D D1115_15490 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D D1115_05500 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D D1115_22240 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D D1115_02570 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_13945 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:vaf00040] D D1115_05495 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D D1115_15645 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D D1115_15650 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D D1115_22235 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D D1115_10450 carbohydrate kinase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D D1115_10445 altronate hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D D1115_22225 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D D1115_22230 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D D1115_22265 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D D1115_13990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D1115_01685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D1115_07895 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00051 Fructose and mannose metabolism [PATH:vaf00051] D D1115_04675 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D D1115_08090 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14030 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_20935 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14035 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_17525 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_14040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D D1115_14050 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_13945 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D D1115_18530 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D D1115_05430 alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D D1115_02570 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D D1115_13975 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1115_20915 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D D1115_18525 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:vaf00052] D D1115_03540 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D D1115_03535 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D D1115_03530 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D D1115_03525 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_18815 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_09865 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D D1115_06065 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D D1115_09850 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_15485 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D D1115_15610 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D D1115_04680 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D D1115_15635 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D D1115_15620 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D D1115_15625 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D D1115_15630 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D D1115_15640 nagA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25] C 00053 Ascorbate and aldarate metabolism [PATH:vaf00053] D D1115_13990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D1115_22265 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D D1115_13985 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D D1115_07895 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D D1115_10435 mandelate racemase/muconate lactonizing enzyme family protein K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27] C 00500 Starch and sucrose metabolism [PATH:vaf00500] D D1115_04670 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D D1115_04680 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D D1115_15785 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_15860 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_16370 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D D1115_05160 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D D1115_05165 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D D1115_21875 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D D1115_21885 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D D1115_21965 pulA; pullulanase-type alpha-1,6-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41] D D1115_21865 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D D1115_20580 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D D1115_13360 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D D1115_21880 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_21990 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D D1115_11715 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D D1115_11710 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_01735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1115_04675 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vaf00520] D D1115_06670 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D D1115_18375 DUF5011 domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D D1115_12640 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D D1115_03210 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_11400 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_03205 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_11085 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D D1115_11095 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D D1115_15670 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D D1115_03215 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D D1115_04675 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D D1115_13410 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1115_03335 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D D1115_15215 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D1115_12650 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D D1115_12645 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D D1115_08870 HAD family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D D1115_02155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1115_00715 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1115_17925 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D1115_16670 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D D1115_09995 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_13990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D1115_03535 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D D1115_03530 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D D1115_03525 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_18815 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_13985 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D D1115_01735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1115_08090 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14030 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_20935 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14035 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_17525 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_14040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D D1115_14050 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D D1115_05160 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:vaf00620] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_03055 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D D1115_03060 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_05030 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_10280 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_22445 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D1115_10175 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D1115_10180 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D D1115_13420 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1115_04105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1115_00985 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1115_00980 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1115_04705 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1115_07010 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D D1115_06885 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D D1115_17140 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D D1115_19195 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D D1115_10320 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D D1115_18350 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D D1115_21585 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D D1115_09435 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D D1115_06260 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D D1115_01555 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1115_02930 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D D1115_02935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D D1115_02925 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_09315 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_01585 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D D1115_14605 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D1115_21305 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D D1115_12405 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_13475 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vaf00630] D D1115_12400 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_12405 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_11030 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D1115_03150 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20280 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D D1115_20890 catalase K03781 katE; catalase [EC:1.11.1.6] D D1115_02055 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D D1115_01395 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D D1115_01870 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_11700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18475 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1115_18495 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_18480 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D D1115_03155 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D D1115_05505 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_14840 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_15495 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_22245 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1115_07345 twin-arginine translocation signal domain-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D1115_20990 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D1115_07340 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D D1115_07335 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D D1115_10935 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:vaf00640] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_06935 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D D1115_10175 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D1115_19610 flavocytochrome c K26355 ard; acrylate reductase [EC:1.3.1.125] D D1115_10180 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D D1115_19575 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D1115_19580 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D1115_19585 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_05030 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_10280 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_00125 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_04105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1115_00985 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1115_00980 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1115_04705 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1115_10995 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1115_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1115_06920 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D D1115_06925 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D D1115_06930 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D D1115_03150 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1115_06915 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D D1115_18065 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D D1115_18575 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:vaf00650] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_06115 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_18770 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_22445 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D D1115_20265 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D D1115_20280 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D D1115_02935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D D1115_22670 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D D1115_11015 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_11010 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_11025 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1115_11020 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_04790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D D1115_02370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D1115_05030 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_10280 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D D1115_19720 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D D1115_20035 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D D1115_13440 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_15180 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_13435 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D1115_15185 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D D1115_23230 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:vaf00660] D D1115_13440 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_15180 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_13435 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D1115_15185 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D D1115_10995 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1115_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1115_13485 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D1115_13490 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D1115_13480 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:vaf00562] D D1115_12360 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D1115_13975 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:vaf00190] D D1115_04925 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D D1115_17405 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D D1115_11015 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_11010 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_11025 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1115_11020 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_13140 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D1115_13135 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1115_13130 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D1115_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1115_17545 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D D1115_17535 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D D1115_17530 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D D1115_17540 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D D1115_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1115_07230 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D D1115_19735 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D D1115_07235 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D D1115_05285 cydA; cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D D1115_05290 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D D1115_05295 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D D1115_15235 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D1115_15225 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D1115_15230 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D1115_15240 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D1115_15220 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D1115_15245 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1115_15250 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D1115_13635 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D D1115_05825 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D D1115_12425 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:vaf00710] D D1115_02565 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1115_10505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_20365 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_02570 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_13945 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D D1115_02555 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1115_17590 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1115_02610 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D1115_01435 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D D1115_13975 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1115_01685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D1115_01585 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D D1115_14605 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D1115_01555 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:vaf00720] D D1115_21305 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D D1115_01585 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_09315 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D1115_11015 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_11010 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_11025 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1115_11020 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1115_10995 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_05100 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1115_03150 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1115_04105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1115_00985 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1115_00980 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1115_04705 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1115_18590 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D D1115_10860 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D1115_01575 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D D1115_10180 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D D1115_10175 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:vaf00680] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D1115_15905 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D D1115_07345 twin-arginine translocation signal domain-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D1115_20990 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D1115_07340 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D D1115_07335 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D D1115_11700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_01870 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D D1115_02055 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1115_01585 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_02570 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_13945 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_05810 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D D1115_05805 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D D1115_05195 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D D1115_16045 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D D1115_16050 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D D1115_10175 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D1115_10180 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_21305 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D D1115_01200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D D1115_02605 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D1115_06195 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:vaf00910] D D1115_19465 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D D1115_19460 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D D1115_19455 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D D1115_20245 napA; periplasmic nitrate reductase subunit alpha K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D D1115_20250 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D D1115_19495 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D D1115_19140 nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D D1115_19450 nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D D1115_19135 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D D1115_19445 nirD; nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D D1115_05935 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_12930 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_12940 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_12935 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_12945 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_05980 FAD-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_03080 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:vaf00920] D D1115_13710 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_22850 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_13715 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_22855 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_13700 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D D1115_14530 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D1115_01780 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D D1115_01770 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D D1115_01775 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D D1115_05985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_17615 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_00585 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D D1115_01180 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D1115_11230 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D1115_04805 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D D1115_08010 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D D1115_01565 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D D1115_21325 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D D1115_21320 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D D1115_21315 dimethylsulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:vaf00061] D D1115_04105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1115_00985 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1115_00980 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1115_04705 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1115_10030 acyl carrier protein K02078 acpP; acyl carrier protein D D1115_10040 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1115_14245 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_10045 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_19085 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_04635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1115_10025 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1115_10035 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_21165 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_23200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_14235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_04080 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1115_06115 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_18770 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_10905 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_03505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:vaf00071] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_04170 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D D1115_06110 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D D1115_10905 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_03505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:vaf00121] D D1115_07550 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:vaf00561] D D1115_03155 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D D1115_03570 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D D1115_00610 plsB; glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D D1115_10050 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D1115_13280 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1115_02160 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D D1115_14275 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D D1115_06065 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D D1115_09850 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:vaf00564] D D1115_01185 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D D1115_03565 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D D1115_00610 plsB; glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D D1115_13280 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1115_02160 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D D1115_14275 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D D1115_00490 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D D1115_16260 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D D1115_04050 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D D1115_01225 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D D1115_09570 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D D1115_11830 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D D1115_05905 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D D1115_21415 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:vaf00600] D D1115_15775 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D D1115_09865 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D D1115_06065 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D D1115_09850 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D D1115_03210 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_11400 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:vaf00592] D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:vaf01040] D D1115_18195 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D D1115_18775 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D D1115_04815 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D1115_09665 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:vaf00230] D D1115_13205 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_19215 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_16530 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_03470 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_11480 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D1115_04725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D D1115_00850 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D D1115_04185 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D1115_08125 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D D1115_11925 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D D1115_04190 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D D1115_15075 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D D1115_06275 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D D1115_05655 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D1115_00855 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1115_04745 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D D1115_18675 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D D1115_06015 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_11435 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_02785 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D D1115_05675 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D D1115_18595 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D D1115_03475 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_07850 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_17240 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_15740 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D D1115_12570 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D1115_03075 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D D1115_12250 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D1115_12305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1115_12600 non-canonical purine NTP phosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D D1115_02475 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D D1115_11890 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D D1115_12245 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1115_17700 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D D1115_20975 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D D1115_14445 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D D1115_09500 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1115_09505 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D1115_18985 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D D1115_14455 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D1115_00330 guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D1115_12470 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D1115_02745 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D D1115_01365 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1115_21270 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1115_14670 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D D1115_11770 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D D1115_13725 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D D1115_11130 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D1115_02750 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1115_13195 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D D1115_13530 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D D1115_13700 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D D1115_13710 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_22850 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_13715 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_22855 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_19795 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D D1115_19800 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:vaf00240] D D1115_12985 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1115_12990 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1115_02175 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D1115_02170 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D D1115_20715 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D D1115_07135 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D D1115_14350 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D D1115_09905 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D D1115_04035 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D D1115_12305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1115_02750 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1115_02015 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D D1115_07930 M48 family peptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D D1115_02755 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D D1115_09930 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D D1115_10100 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D D1115_18675 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D D1115_06015 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_11435 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_02785 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D D1115_16515 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D D1115_04880 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D D1115_20950 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D D1115_15740 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D D1115_04195 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D D1115_13725 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D D1115_11770 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D D1115_08120 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D D1115_20435 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D D1115_18985 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D D1115_09500 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1115_09505 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D1115_20205 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12] D D1115_10010 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D D1115_03465 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D D1115_05760 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D D1115_12730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:vaf00250] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_02670 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D D1115_10485 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D D1115_01485 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D1115_11110 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D1115_22910 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D1115_10635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D D1115_01870 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D D1115_05545 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D D1115_01055 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D D1115_01610 argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1] D D1115_01365 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1115_21270 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1115_05655 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D1115_02175 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D1115_02170 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D D1115_04790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D D1115_02370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D1115_12930 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_12940 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_12935 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_12945 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_05980 FAD-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D1115_22340 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_12985 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1115_12990 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1115_02465 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D1115_13410 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1115_04725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:vaf00260] D D1115_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_01860 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_12885 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D D1115_01570 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D D1115_04690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1115_12880 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D D1115_12875 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D D1115_19220 low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D D1115_11700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_01870 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D D1115_02055 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D D1115_03155 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D D1115_01200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D D1115_02605 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D1115_06195 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D1115_16925 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D D1115_16930 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D D1115_18475 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1115_18495 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_18480 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D D1115_17755 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D D1115_17750 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D D1115_09335 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1115_16565 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1115_15200 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D D1115_17985 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D D1115_09650 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D D1115_09645 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D D1115_06730 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D D1115_09540 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D D1115_06725 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D D1115_06735 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D D1115_22165 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D D1115_22155 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] C 00270 Cysteine and methionine metabolism [PATH:vaf00270] D D1115_01180 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D1115_11230 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D1115_04805 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D D1115_05900 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D D1115_09680 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D D1115_02550 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D1115_12955 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D D1115_17990 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D D1115_12570 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D1115_02965 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D D1115_09765 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D D1115_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_01860 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_12885 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D D1115_01570 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D D1115_04690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1115_08010 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D D1115_01565 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D D1115_12215 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D D1115_15190 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1115_02525 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1115_21240 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_05985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_17615 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_17985 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D D1115_13575 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1115_09335 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1115_16565 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1115_02605 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D1115_06195 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:vaf00280] D D1115_15190 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1115_19575 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D1115_19580 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D1115_19585 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_19705 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D D1115_20895 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D D1115_19675 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D D1115_19710 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D D1115_19715 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D D1115_19720 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D D1115_20035 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vaf00290] D D1115_15200 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D D1115_13485 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D1115_13490 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D1115_13480 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D D1115_13440 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_15180 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_13435 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D1115_15185 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D D1115_15000 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D1115_15195 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D1115_15190 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1115_00085 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D D1115_10635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D D1115_13475 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:vaf00300] D D1115_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_01860 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_12885 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D D1115_01570 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D D1115_04690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1115_04250 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D1115_12995 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D D1115_03580 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D D1115_01410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D1115_04270 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D D1115_00450 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D1115_00445 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D1115_21200 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D D1115_13065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1115_13060 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:vaf00310] D D1115_11000 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_17985 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D D1115_00885 lysine decarboxylase CadA K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D D1115_02370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D1115_16405 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D D1115_06310 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D D1115_12205 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] C 00220 Arginine biosynthesis [PATH:vaf00220] D D1115_02185 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D D1115_01610 argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1] D D1115_19795 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D D1115_19800 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D D1115_02190 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D D1115_02465 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_12985 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1115_12990 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_10635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D D1115_01600 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D D1115_01595 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D D1115_01410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D1115_01590 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:vaf00330] D D1115_20435 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D D1115_16335 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D D1115_16330 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D D1115_21950 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D1115_09535 saccharopine dehydrogenase family protein K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43] D D1115_09530 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D D1115_22710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D1115_01415 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D D1115_01420 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D D1115_08030 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D D1115_02495 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D D1115_22340 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D1115_11875 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D1115_11870 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_07875 ornithine cyclodeaminase family protein K19742 lhpI; 1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.49] C 00340 Histidine metabolism [PATH:vaf00340] D D1115_05690 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D D1115_05725 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D D1115_05715 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D D1115_05710 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D D1115_05720 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D D1115_05705 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D D1115_05695 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D D1115_06325 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D D1115_06330 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D D1115_06340 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] C 00350 Tyrosine metabolism [PATH:vaf00350] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_07695 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D1115_07690 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D D1115_07680 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D D1115_07685 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D D1115_13970 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D D1115_02370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:vaf00360] D D1115_20030 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D D1115_23185 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_17170 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D D1115_07695 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D1115_12225 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D D1115_17715 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D D1115_22710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:vaf00380] D D1115_11000 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_16420 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D D1115_22710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D1115_20890 catalase K03781 katE; catalase [EC:1.11.1.6] D D1115_17715 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vaf00400] D D1115_07055 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1115_12635 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1115_01670 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D D1115_00990 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D D1115_15060 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D D1115_01665 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D D1115_05140 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D D1115_04605 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D D1115_09625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D1115_09630 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D D1115_09635 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D D1115_09640 trpF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D D1115_09650 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D D1115_09645 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D D1115_12630 bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D D1115_12595 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_20030 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:vaf00410] D D1115_04790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D D1115_03100 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:vaf00430] D D1115_04790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D D1115_00290 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D D1115_05545 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D D1115_10180 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D D1115_10175 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:vaf00450] D D1115_01565 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D D1115_05900 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D D1115_09680 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D D1115_06225 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D D1115_13710 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_22850 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_13715 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_22855 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_10110 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:vaf00460] D D1115_15785 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_15860 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_00290 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D D1115_10485 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D D1115_01485 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D1115_11700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:vaf00470] D D1115_01720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1115_18845 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1115_17985 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D D1115_02465 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D1115_00665 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D D1115_13050 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1115_00450 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D1115_00445 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D1115_07890 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D D1115_07885 FAD-binding oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D D1115_07870 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D D1115_07895 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D D1115_12225 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:vaf00480] D D1115_00290 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D D1115_18805 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D D1115_02525 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1115_21240 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1115_02225 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D1115_12310 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D D1115_07120 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D1115_11905 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D D1115_19615 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_19365 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_20885 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_14835 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D D1115_05100 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1115_06790 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D D1115_06780 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1115_01625 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D D1115_21130 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D D1115_21950 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:vaf00511] D D1115_09865 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D D1115_03210 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_11400 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_13340 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D D1115_21370 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D D1115_15775 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:vaf00540] D D1115_04085 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D D1115_13015 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D D1115_04075 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1115_13385 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1115_05745 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D D1115_04090 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D D1115_04980 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D D1115_02115 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D1115_11440 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D1115_04990 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D1115_07990 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D D1115_05025 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D D1115_20510 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D D1115_14270 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D D1115_04175 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D1115_23005 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D1115_13215 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D D1115_11725 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D D1115_14180 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D D1115_23010 dehydrogenase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] D D1115_23000 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71] D D1115_14195 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vaf00541] D D1115_03525 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_18815 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D1115_13990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D1115_13985 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D D1115_14260 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D1115_14265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D D1115_08090 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14030 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_20935 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D1115_14035 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_17525 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D D1115_14040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D D1115_14050 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D D1115_15215 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D1115_17925 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D1115_14010 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D D1115_14020 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] C 00550 Peptidoglycan biosynthesis [PATH:vaf00550] D D1115_02155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1115_00715 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1115_13035 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D1115_13050 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1115_13065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1115_18845 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1115_13060 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D1115_04045 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D D1115_13460 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D D1115_13055 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1115_13040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D1115_21870 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D1115_01635 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1115_03140 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D D1115_11665 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D1115_13070 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1115_11680 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21740 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:vaf00552] D D1115_13460 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D D1115_14010 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:vaf00543] D D1115_01180 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:vaf00730] D D1115_00210 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D D1115_16090 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D D1115_00215 thiamine phosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D D1115_00220 thiF; thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D D1115_12345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1115_11800 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D D1115_00235 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D D1115_11825 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D1115_00230 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D D1115_16065 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D D1115_16060 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D D1115_11835 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D D1115_01230 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D1115_21925 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D1115_19530 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D D1115_04915 thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D D1115_11130 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D1115_16070 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:vaf00740] D D1115_09450 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D1115_11850 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D D1115_11860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D D1115_00465 yigB; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D D1115_20460 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D D1115_11845 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D D1115_07490 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D D1115_11855 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D D1115_12700 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D D1115_00365 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D D1115_21800 oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D D1115_16065 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D D1115_13205 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_19215 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_16530 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D1115_13620 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:vaf00750] D D1115_22355 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D D1115_21935 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D D1115_02560 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D D1115_04685 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D D1115_06195 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D1115_02720 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D D1115_12875 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:vaf00760] D D1115_02670 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D D1115_05340 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D D1115_03040 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D D1115_21555 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D D1115_03475 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_07850 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_17240 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D D1115_18675 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D D1115_06015 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_11435 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D D1115_02785 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D D1115_02750 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1115_00810 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D D1115_20695 ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D D1115_02810 nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D D1115_21565 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D D1115_07320 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D D1115_11995 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D D1115_00635 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D D1115_18895 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D D1115_18890 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D D1115_02370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:vaf00770] D D1115_13440 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_15180 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1115_13435 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D1115_15185 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D D1115_15000 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D1115_15195 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D1115_03105 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D D1115_03815 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D D1115_03100 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D D1115_00725 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D D1115_14335 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D D1115_02750 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1115_03015 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D D1115_02725 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D D1115_18625 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D D1115_15190 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1115_06140 panP; putative pyridoxal-dependent aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:vaf00780] D D1115_05595 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D D1115_04635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1115_10025 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1115_10035 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_21165 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_23200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_14235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_04080 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1115_14510 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D D1115_05580 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D D1115_05600 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D D1115_05585 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D D1115_00720 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:vaf00785] D D1115_11690 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D D1115_11695 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_03055 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D D1115_03060 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1115_11005 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D1115_11000 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1115_19575 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D1115_19580 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D1115_19585 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D1115_18475 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1115_18495 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1115_18480 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:vaf00790] D D1115_17650 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D D1115_19530 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D D1115_18330 NUDIX domain-containing protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D D1115_13275 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D D1115_03110 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D D1115_13270 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D D1115_13535 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D1115_04710 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D D1115_09450 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D1115_11850 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D D1115_01405 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D D1115_09320 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D D1115_09345 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D D1115_20025 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D D1115_20030 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D D1115_06955 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D D1115_06960 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D D1115_11755 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D D1115_06460 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D1115_10250 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D1115_10240 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D D1115_10230 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D D1115_10245 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D D1115_07430 moeA; bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D D1115_17645 molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D D1115_07425 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:vaf00670] D D1115_13535 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D1115_18590 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D D1115_10860 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D1115_11700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_18485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1115_04185 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D1115_00855 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1115_18495 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1115_12730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D D1115_10935 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D D1115_01575 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D D1115_02615 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:vaf00860] D D1115_11375 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1115_11465 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D D1115_03270 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D D1115_14730 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D D1115_00425 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D D1115_00420 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D D1115_00815 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D D1115_14675 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D D1115_00150 menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D D1115_11125 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D D1115_13720 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D D1115_19125 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D D1115_19490 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D D1115_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1115_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1115_10090 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D D1115_18945 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D D1115_12960 cobalamin biosynthesis family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D D1115_08045 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D D1115_08050 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D D1115_08055 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D D1115_08040 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D D1115_20600 hutZ; heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D D1115_22265 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D D1115_01550 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vaf00130] D D1115_00600 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D D1115_00605 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D1115_00355 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D D1115_13620 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D D1115_02640 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D D1115_09490 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D D1115_02635 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D D1115_14765 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D D1115_11600 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D D1115_10630 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D D1115_10625 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D D1115_10620 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D D1115_10610 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D D1115_10615 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D D1115_18720 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D D1115_18420 flavodoxin family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D1115_04215 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D1115_17710 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D1115_06750 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D1115_07695 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:vaf00900] D D1115_11825 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D1115_04055 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D D1115_02770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D D1115_11475 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D D1115_02775 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D D1115_12290 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D D1115_12680 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_19080 3-hydroxy-3-methylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D D1115_13620 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D D1115_11820 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D1115_13565 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D D1115_04045 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:vaf00903] D D1115_22085 steryl acetyl hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:vaf00907] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_19720 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D D1115_02555 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1115_17590 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics [PATH:vaf01059] D D1115_22200 alpha/beta fold hydrolase K21159 sgcF; epoxide hydrolase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:vaf00523] D D1115_14260 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D1115_14265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D D1115_10630 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D D1115_14265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:vaf00946] D D1115_15785 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_15860 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:vaf00332] D D1115_11875 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D1115_11870 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:vaf00261] D D1115_13710 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_22850 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D D1115_13715 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_22855 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D1115_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_01860 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1115_12885 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D D1115_01570 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D D1115_04690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1115_04250 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D1115_12995 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:vaf00521] D D1115_11045 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1115_12360 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D1115_14260 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D1115_14265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:vaf00525] D D1115_14260 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D1115_14265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:vaf00401] D D1115_12630 bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D D1115_09625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D1115_09630 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D D1115_10040 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1115_10035 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_21165 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_23200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_14235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D D1115_10030 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:vaf00999] D D1115_02550 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D1115_15060 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D D1115_15785 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D1115_15860 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:vaf00362] D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D D1115_22450 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D1115_22440 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D D1115_22445 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D D1115_12320 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D D1115_23220 SDR family oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_02935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:vaf00627] D D1115_22710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D1115_07010 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D D1115_13620 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:vaf00364] D D1115_19480 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:vaf00625] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:vaf00361] D D1115_19480 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:vaf00623] D D1115_19480 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:vaf00622] D D1115_22450 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D1115_22440 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D D1115_22445 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00633 Nitrotoluene degradation [PATH:vaf00633] D D1115_18345 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D D1115_23225 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D D1115_00130 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:vaf00643] D D1115_07690 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D D1115_07680 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D D1115_07685 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D D1115_22710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D1115_22670 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation D D1115_19795 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D D1115_19800 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:vaf00930] D D1115_22085 steryl acetyl hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D D1115_22790 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D1115_00135 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D D1115_04575 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:vaf00621] D D1115_22450 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D1115_22440 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D D1115_22445 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:vaf00626] D D1115_20065 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D D1115_15910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:vaf00984] D D1115_23240 FAD-dependent oxidoreductase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D D1115_23260 Rieske (2Fe-2S) protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D D1115_22765 3-ketosteroid-9-alpha-hydroxylase K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D D1115_22760 flavin-dependent monooxygenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D D1115_22455 flavin reductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D D1115_22660 biphenyl 2,3-dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D D1115_22495 alpha/beta fold hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D D1115_23235 fatty acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:vaf03020] D D1115_00795 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1115_00800 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1115_13765 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1115_14450 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:vaf03010] D D1115_09925 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D1115_04025 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D1115_13860 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D1115_13770 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D1115_13805 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D1115_01690 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D1115_01530 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D1115_13820 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D1115_13145 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D1115_13895 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D1115_13775 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D1115_01525 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D1115_13780 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D1115_13825 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D1115_03380 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D1115_02985 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D1115_13845 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D1115_01700 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D1115_13870 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D1115_12710 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D1115_13295 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D1115_00780 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D1115_13875 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D D1115_13890 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D1115_13885 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D1115_13830 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D1115_13815 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D1115_00790 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D1115_01705 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D1115_00785 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D1115_00775 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D1115_13150 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D1115_13840 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D1115_13795 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D1115_13855 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D1115_13760 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D1115_13810 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D1115_03000 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D1115_06620 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D1115_13560 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D1115_13865 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D1115_13880 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D1115_13835 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D1115_06020 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D D1115_13555 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D1115_14325 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D1115_13850 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D1115_13800 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D1115_13900 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D1115_10055 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D1115_14320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D1115_00030 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D1115_06615 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D1115_13785 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D1115_01785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00895 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_01805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_02340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_12555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_15040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_16120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_02345 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_12540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_15020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_16145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_16150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01795 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01825 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02350 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02355 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_12535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_15015 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00915 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:vaf00970] D D1115_12550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00935 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_01815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_16135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_02850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_14960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_11360 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_10855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02385 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_10275 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_00195 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_00695 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_00950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_01830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_02360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_12530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_09565 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19160 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19170 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19200 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_11540 tRNA-OTHER K14223 tRNA-Gln; tRNA Gln D D1115_11590 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11560 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11570 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_12545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_00165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_15035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_16125 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_01240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_00745 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_17960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01250 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_09550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_09560 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_19175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_14945 tRNA-His K14226 tRNA-His; tRNA His D D1115_14955 tRNA-His K14226 tRNA-His; tRNA His D D1115_00385 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_00930 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_01810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_03345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_09555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_16430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_19165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_19180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_02245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_00900 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_15030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_16130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_11500 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01245 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01255 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01265 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01285 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01295 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01305 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01310 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_03350 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11515 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11550 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11580 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_13315 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_02410 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02425 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02435 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_11410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_14940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_14950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_05365 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_02845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_00405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_10425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_16155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_19880 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_02855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_00750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_00735 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_00700 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1115_12525 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1115_00740 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10550 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10555 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10565 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10570 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10575 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_12185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_00180 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_07665 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_07660 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_00905 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_15025 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_16140 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_11375 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1115_11080 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D D1115_02825 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_12265 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_05265 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1115_09350 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D D1115_00095 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1115_00090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1115_06605 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1115_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1115_05755 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1115_10110 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1115_02215 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1115_11640 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1115_12695 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1115_12790 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D D1115_10945 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1115_03960 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1115_12285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1115_06640 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1115_06645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1115_03295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_21345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_01400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:vaf03060] D D1115_13790 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1115_00765 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1115_03340 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1115_12370 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_20290 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_12365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_20285 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_12375 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1115_00015 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1115_01190 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1115_02980 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1115_04840 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D1115_14750 tatA; twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D D1115_14745 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1115_14740 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D D1115_02700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D1115_12690 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:vaf04122] D D1115_12345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1115_05985 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_17615 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D1115_00110 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D D1115_01520 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D D1115_01515 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D D1115_01510 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D D1115_07015 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D D1115_05665 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D1115_10230 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D D1115_06460 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D1115_10250 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D1115_10235 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D D1115_17640 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D D1115_10240 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D D1115_10245 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D D1115_11800 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D D1115_00225 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D D1115_00220 thiF; thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:vaf03018] D D1115_12750 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D D1115_10075 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D D1115_00335 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1115_03385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D1115_18630 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_21225 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_22205 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_19945 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_10725 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1115_00310 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_03925 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_00345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_11980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_21290 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_01110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1115_01340 RNA chaperone Hfq K03666 hfq; host factor-I protein D D1115_12425 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D D1115_03115 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:vaf03030] D D1115_06715 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_09380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_05455 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_01000 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_22880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04100 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1115_04750 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1115_10005 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1115_03435 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D D1115_00060 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1115_01715 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_04150 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D1115_04095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:vaf03410] D D1115_10315 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D1115_12855 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D D1115_02450 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D1115_14305 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D1115_15695 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D D1115_05895 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D D1115_05065 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1115_12865 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_12800 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:vaf03420] D D1115_04940 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D1115_01880 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D1115_10270 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D1115_09575 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D1115_00280 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:vaf03430] D D1115_02805 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D1115_12760 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D D1115_00280 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1115_12255 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D1115_11815 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D1115_12800 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_04100 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1115_00060 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1115_04750 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1115_10005 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1115_06715 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_09380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_05455 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_01000 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_22880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_03435 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1115_01680 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:vaf03440] D D1115_12800 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_02715 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D1115_04760 recR; recombination protein RecR K06187 recR; recombination protein RecR D D1115_02815 recA; recombinase RecA K03553 recA; recombination protein RecA D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_05275 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D1115_05280 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D1115_05270 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1115_14465 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D D1115_03615 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D D1115_03610 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D D1115_03620 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D D1115_04100 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1115_00060 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1115_04750 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1115_10005 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1115_06715 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_09380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_05455 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_01000 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_22880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_03435 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D D1115_13905 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D D1115_01695 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D D1115_05070 prepilin peptidase K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:vaf03250] D D1115_03855 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:vaf02010] D D1115_07410 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D D1115_07415 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D D1115_07420 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D D1115_19465 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D D1115_19460 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D D1115_19455 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D D1115_16075 ABC transporter ATP-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D D1115_16080 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D D1115_16085 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D D1115_18940 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D D1115_18935 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D D1115_18930 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D D1115_19925 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D D1115_03185 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D D1115_22625 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D D1115_03195 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D D1115_13615 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D D1115_13610 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D D1115_13605 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D D1115_07310 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_07315 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_10200 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_07305 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D D1115_07300 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D D1115_07295 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D D1115_06695 proX; proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_20740 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_17760 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_21505 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_06700 proW; proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D D1115_17765 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D D1115_21510 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D D1115_06705 proV; proline/glycine betaine ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_17770 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_21515 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_20855 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D D1115_20850 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D D1115_20845 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D D1115_20865 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D D1115_13375 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D D1115_13370 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D D1115_13365 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D D1115_02140 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D D1115_02135 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D D1115_02130 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D D1115_02145 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D D1115_02125 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D D1115_12475 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_17275 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_19870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_17280 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D1115_12455 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1115_17285 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1115_12450 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1115_17290 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1115_19645 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D D1115_19635 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein D D1115_19640 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein D D1115_19650 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D D1115_07040 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D D1115_07035 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D D1115_07030 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D D1115_07025 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D D1115_00045 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D D1115_00040 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D D1115_00035 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D D1115_05050 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D D1115_05060 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein D D1115_05055 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D D1115_05045 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D D1115_11740 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D D1115_11735 ABC transporter permease K02072 metI; D-methionine transport system permease protein D D1115_11730 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D D1115_10225 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D D1115_10220 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D D1115_10215 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D D1115_10210 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D D1115_10205 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D D1115_05855 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D D1115_05850 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D D1115_05845 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D D1115_05840 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D D1115_05835 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D D1115_14395 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D D1115_09900 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D D1115_14405 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D D1115_14400 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein D D1115_08025 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D D1115_08020 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D D1115_10975 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D D1115_10985 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D D1115_17195 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D D1115_04950 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D D1115_04960 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D D1115_04955 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D1115_04510 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D D1115_04500 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D D1115_04495 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D1115_02230 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D D1115_02100 lipopolysaccharide ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D1115_00575 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D D1115_00570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1115_04975 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D D1115_08180 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D D1115_08185 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D D1115_06215 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D D1115_06220 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:vaf02060] D D1115_11245 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D D1115_11240 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_09995 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D D1115_11085 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D D1115_04670 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D D1115_11715 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D D1115_08080 PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D D1115_15635 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D D1115_15620 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D D1115_15625 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D D1115_15630 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D D1115_18535 HPr family phosphocarrier protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D D1115_18525 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D D1115_20915 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D D1115_18530 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D D1115_12745 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D D1115_02075 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D D1115_02085 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D D1115_20920 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:vaf03070] D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_14585 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D D1115_14575 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D D1115_14570 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D D1115_14555 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D D1115_14550 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D D1115_14545 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D D1115_14540 type II secretion system protein M K02462 gspM; general secretion pathway protein M D D1115_14580 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D D1115_12370 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_20290 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_12365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_20285 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_00765 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1115_03340 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1115_13790 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1115_12375 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1115_00015 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1115_01190 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1115_02980 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1115_14750 tatA; twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D D1115_14745 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1115_14740 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:vaf02020] D D1115_12480 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D1115_12485 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D D1115_19530 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D D1115_12475 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_17275 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_19870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_14370 EamA family transporter K07790 pagO; putative membrane protein PagO D D1115_14480 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1115_14485 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D D1115_01070 cpxA; two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D D1115_01075 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_16265 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_20500 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D D1115_20495 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D D1115_13170 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D D1115_21005 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D D1115_21010 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D D1115_04315 flagellin K02406 fliC; flagellin D D1115_04320 flagellin K02406 fliC; flagellin D D1115_11255 flagellin K02406 fliC; flagellin D D1115_11260 flagellin K02406 fliC; flagellin D D1115_16780 Lateral flagellin K02406 fliC; flagellin D D1115_04450 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D D1115_16735 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D1115_11810 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D D1115_16730 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D1115_18075 torS; TMAO reductase system sensor histidine kinase/response regulator TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D D1115_05200 torR; two-component system response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D D1115_05805 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D D1115_05810 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D D1115_05195 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D D1115_12920 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D D1115_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1115_00055 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1115_06260 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D D1115_09400 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D D1115_20230 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D D1115_20225 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D D1115_01150 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1115_01145 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1115_01140 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D D1115_01135 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D D1115_02730 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D D1115_09580 uvrY; two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D D1115_02835 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D D1115_07915 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D D1115_20165 molecular chaperone K07346 fimC; fimbrial chaperone protein D D1115_04015 glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D D1115_04120 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D D1115_14655 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D1115_14660 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_22360 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D D1115_16380 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D D1115_02095 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D D1115_03035 pilin K02650 pilA; type IV pilus assembly protein PilA D D1115_11320 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D1115_05915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_07005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_01210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_04890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_02400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_10745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_13225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_21780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17585 PAS domain-containing protein K03776 aer; aerotaxis receptor D D1115_04480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_04485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_04465 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D1115_04455 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_08255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_04470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D1115_11325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_09960 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20590 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_18280 chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20325 response regulator K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-] D D1115_10260 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D D1115_10265 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO D D1115_03070 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D D1115_05995 DNA-binding response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D D1115_04350 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D1115_04355 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D D1115_04360 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_16830 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_01430 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D D1115_02465 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D1115_22555 response regulator K15012 regA; two-component system, response regulator RegA D D1115_13140 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D1115_13135 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1115_13130 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D1115_07230 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D D1115_19735 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D D1115_07235 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D D1115_05285 cydA; cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D D1115_05290 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D D1115_05295 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_22940 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D D1115_17820 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D D1115_10085 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D D1115_17925 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D1115_03710 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D D1115_11335 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D D1115_16600 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:vaf04148] D D1115_21950 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D1115_13140 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:vaf02024] D D1115_02965 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D D1115_20325 response regulator K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-] D D1115_10260 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D D1115_10265 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO D D1115_01340 RNA chaperone Hfq K03666 hfq; host factor-I protein D D1115_03070 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D D1115_01580 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA D D1115_09625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D1115_09630 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D D1115_07055 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1115_12635 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1115_04790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D D1115_08000 amino acid permease K20265 gadC; glutamate:GABA antiporter D D1115_07880 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D D1115_07855 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D D1115_07860 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D D1115_07865 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D D1115_06985 tandem-95 repeat protein K20276 bapA; large repetitive protein D D1115_10905 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_03505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_01430 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D D1115_01745 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D1115_09450 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D1115_11860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D D1115_07795 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D D1115_07800 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D D1115_10225 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D D1115_10220 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D D1115_10215 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D D1115_10210 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D D1115_10205 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D D1115_03245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_15810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_14920 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_19810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_03240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1115_14915 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1115_03235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_15820 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_14910 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_03230 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14390 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_15825 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14925 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_19825 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14385 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1115_03225 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1115_00015 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1115_00765 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1115_03340 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1115_13790 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1115_12375 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1115_01190 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1115_02980 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae [PATH:vaf05111] D D1115_02965 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D D1115_20325 response regulator K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-] D D1115_10260 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D D1115_10265 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO D D1115_01340 RNA chaperone Hfq K03666 hfq; host factor-I protein D D1115_01580 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA D D1115_04730 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB D D1115_12785 sigma-54-dependent Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation D D1115_17925 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D1115_01180 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D1115_17940 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D D1115_17935 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D D1115_17835 hypothetical protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ D D1115_14585 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D D1115_14580 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D D1115_14575 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D D1115_14570 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D D1115_14555 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D D1115_14550 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D D1115_14545 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D D1115_14540 type II secretion system protein M K02462 gspM; general secretion pathway protein M D D1115_14535 type II secretion system protein N K02463 gspN; general secretion pathway protein N D D1115_11140 transcriptional regulator K10921 toxR; cholera toxin transcriptional activator D D1115_11145 transcriptional regulator K10922 toxS; transmembrane regulatory protein ToxS D D1115_03310 porin K08720 ompU; outer membrane protein OmpU D D1115_18150 porin family protein K10936 acfA; accessory colonization factor AcfA D D1115_07515 DUF4092 domain-containing protein K10939 acfD; accessory colonization factor AcfD D D1115_03070 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D D1115_02730 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D D1115_09580 uvrY; two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D D1115_02835 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_09995 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D D1115_01430 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D D1115_00965 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_17090 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_15890 GGDEF domain-containing protein K20956 cdgA; diguanylate cyclase [EC:2.7.7.65] D D1115_04835 GGDEF domain-containing protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65] D D1115_08150 sensor domain-containing diguanylate cyclase K20959 cdgM; diguanylate cyclase [EC:2.7.7.65] D D1115_01935 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE D D1115_01950 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D D1115_18290 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D D1115_01960 type II secretion system protein K10926 mshC; MSHA pilin protein MshC D D1115_01965 MSHA biogenesis protein MshD K10927 mshD; MSHA pilin protein MshD D D1115_04350 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D1115_02095 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D D1115_02800 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D D1115_04355 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D D1115_04360 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_16830 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_04450 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D D1115_16735 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:vaf02030] D D1115_05915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_07005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_01210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_04890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_02400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_10745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_13225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_21780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17585 PAS domain-containing protein K03776 aer; aerotaxis receptor D D1115_20855 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D D1115_04465 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D1115_04480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_04485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_04455 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_08255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_04460 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D D1115_01740 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D D1115_04470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D1115_11325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_09960 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20590 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_18280 chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_11320 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D1115_04375 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_16845 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_04410 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_16815 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_11810 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D D1115_16730 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D1115_11805 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D1115_16725 chemotaxis protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:vaf02040] D D1115_04365 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D1115_16835 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D1115_16840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D1115_04375 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_16845 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_04380 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D D1115_16850 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D D1115_04385 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_16855 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_04390 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D D1115_04395 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D D1115_00595 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D D1115_16740 flagellar protein K02415 fliL; flagellar protein FliL D D1115_04410 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_16815 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_04415 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_16810 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_04420 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_16805 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_04425 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_16800 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_16790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D1115_04430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_16795 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_11330 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D D1115_16605 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D D1115_11315 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D1115_16610 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D1115_11310 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D1115_16615 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D1115_11305 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D D1115_16620 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D D1115_11300 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D D1115_16625 flaE; flagellar basal body protein FlaE K02390 flgE; flagellar hook protein FlgE D D1115_11295 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D D1115_11290 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D1115_16635 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D1115_11285 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D1115_16640 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D1115_11280 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D1115_16645 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D1115_11275 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D D1115_16650 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ D D1115_11270 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D1115_16655 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D1115_11265 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D D1115_16660 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D D1115_11350 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO D D1115_11345 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D D1115_11355 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT D D1115_01370 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX D D1115_10330 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D D1115_04315 flagellin K02406 fliC; flagellin D D1115_04320 flagellin K02406 fliC; flagellin D D1115_11255 flagellin K02406 fliC; flagellin D D1115_11260 flagellin K02406 fliC; flagellin D D1115_16780 Lateral flagellin K02406 fliC; flagellin D D1115_04330 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D D1115_16765 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2 D D1115_04340 fliS; flagella export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D D1115_16760 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D D1115_11810 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D D1115_16730 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D1115_11805 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D1115_16725 chemotaxis protein K02557 motB; chemotaxis protein MotB D D1115_11335 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D D1115_16600 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D D1115_11340 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D D1115_16595 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D D1115_13310 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D D1115_04350 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D1115_02095 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D D1115_04360 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_16830 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_04450 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D D1115_16735 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:vaf01501] D D1115_03310 porin K08720 ompU; outer membrane protein OmpU D D1115_12640 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D D1115_10225 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D D1115_10220 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D D1115_10215 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D D1115_10210 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D D1115_10205 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D D1115_14975 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D D1115_05410 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14980 vmeC; multidrug efflux RND transporter periplasmic adaptor subunit VmeC K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_20200 vmeY; multidrug efflux RND transporter periplasmic adaptor subunit VmeY K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10540 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14985 vmeD; multidrug efflux RND transporter permease subunit VmeD K18138 acrB; multidrug efflux pump D D1115_20195 vmeZ; multidrug efflux RND transporter permease subunit VmeZ K18138 acrB; multidrug efflux pump D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_01635 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1115_11665 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D1115_13070 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:vaf01502] D D1115_18845 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1115_01720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1115_13060 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D1115_13055 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1115_13040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vaf01503] D D1115_20510 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D D1115_05855 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D D1115_05850 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D D1115_05845 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D D1115_05840 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D D1115_05835 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D D1115_01070 cpxA; two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D D1115_01075 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_16265 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_01325 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D1115_17260 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS D D1115_13170 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D D1115_20475 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D D1115_03855 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D D1115_05410 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14980 vmeC; multidrug efflux RND transporter periplasmic adaptor subunit VmeC K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_20200 vmeY; multidrug efflux RND transporter periplasmic adaptor subunit VmeY K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10540 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14985 vmeD; multidrug efflux RND transporter permease subunit VmeD K18138 acrB; multidrug efflux pump D D1115_20195 vmeZ; multidrug efflux RND transporter permease subunit VmeZ K18138 acrB; multidrug efflux pump D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_04085 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:vaf01000] C 01001 Protein kinases [BR:vaf01001] D D1115_14880 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D D1115_17935 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D D1115_22950 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D D1115_12480 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D1115_14480 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1115_20500 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D D1115_01070 cpxA; two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D D1115_18075 torS; TMAO reductase system sensor histidine kinase/response regulator TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D D1115_12920 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D D1115_20230 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D D1115_02730 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D D1115_07915 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D D1115_09405 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D D1115_12670 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D D1115_14655 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D1115_22360 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D D1115_07400 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D D1115_04465 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D1115_20325 response regulator K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-] D D1115_04355 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:vaf01009] D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:vaf01002] D D1115_12690 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D D1115_03020 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D1115_19965 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D D1115_12245 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1115_22865 peptidase C26 K23150 E3.5.1.129; N5-(cytidine 5'-diphosphoramidyl)-L-glutamine hydrolase [EC:3.5.1.129] D D1115_04725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D D1115_12930 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_12940 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D1115_13410 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1115_11110 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D1115_22910 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D1115_03810 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D D1115_07550 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D D1115_17260 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS D D1115_07120 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D1115_14825 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D D1115_02950 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D D1115_02225 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D1115_12310 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D D1115_21850 M20 family peptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D D1115_04270 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D D1115_07740 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D D1115_20210 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D D1115_11905 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D D1115_17480 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D D1115_04020 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D D1115_07755 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D D1115_00240 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D D1115_07985 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D D1115_03330 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D1115_05610 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D D1115_04225 M48 family peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D D1115_04060 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D D1115_18710 site-2 protease family protein K16922 yydH; putative peptide zinc metalloprotease protein D D1115_12515 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D D1115_23205 hypothetical protein K21429 impA; immunomodulating metalloprotease D D1115_13170 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D D1115_13175 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D D1115_18240 hypothetical protein K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D D1115_21055 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D D1115_16320 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D D1115_11680 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21740 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_10675 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D D1115_07175 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D D1115_00620 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D1115_17050 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D D1115_02700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D1115_07110 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D D1115_10480 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D D1115_09935 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D D1115_08645 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D D1115_00590 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D D1115_13920 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D D1115_01485 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D1115_00290 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D D1115_12500 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D D1115_22095 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D D1115_03405 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D D1115_03410 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D D1115_02065 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D D1115_16100 TldD/PmbA family protein K03592 pmbA; PmbA protein D D1115_02035 tldD; metalloprotease TldD K03568 tldD; TldD protein D D1115_16095 TldD/PmbA family protein K03568 tldD; TldD protein D D1115_01355 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D D1115_01350 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:vaf01003] D D1115_05165 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D D1115_21870 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D1115_03140 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D D1115_01635 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:vaf01005] D D1115_04085 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D D1115_04090 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D D1115_13015 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D D1115_04075 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1115_13385 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1115_05745 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D D1115_04980 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D D1115_07990 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D D1115_05025 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D D1115_20510 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D D1115_14270 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D D1115_11440 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D1115_04990 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D1115_02115 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D1115_14285 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D D1115_14195 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D D1115_14280 lipopolysaccharide heptosyltransferase family protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D D1115_04175 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D1115_23005 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D1115_11725 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D D1115_13215 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D D1115_14180 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D D1115_09745 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vaf01011] D D1115_02155 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1115_00715 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1115_13035 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D1115_13050 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1115_13065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1115_18845 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1115_01720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1115_00665 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D D1115_13055 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1115_13040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D1115_13460 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D D1115_12705 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D1115_01635 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1115_03140 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D D1115_11665 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D1115_13070 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1115_11680 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21740 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1115_21870 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D1115_17260 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS D D1115_12515 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D D1115_17480 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D D1115_12610 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D1115_10875 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D D1115_03560 mltC; membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D D1115_20800 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D D1115_04135 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D D1115_16590 lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D D1115_11930 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D D1115_10015 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D D1115_11675 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D1115_01325 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D1115_03045 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D D1115_17265 hypothetical protein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:vaf01004] D D1115_10040 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1115_14245 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_10045 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_19085 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1115_04635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1115_10025 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1115_10035 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_21165 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_23200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_14235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1115_04080 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1115_06115 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_18770 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D D1115_18775 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D D1115_04815 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D1115_09665 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D D1115_18195 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D D1115_00995 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1115_06935 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D D1115_20035 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D D1115_10905 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_03505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_00610 plsB; glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D D1115_10050 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D1115_13280 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1115_02160 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:vaf01008] D D1115_22200 alpha/beta fold hydrolase K21159 sgcF; epoxide hydrolase C 01006 Prenyltransferases [BR:vaf01006] D D1115_11820 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D1115_13565 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D D1115_04045 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D D1115_01335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D1115_00605 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D1115_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:vaf01007] D D1115_11375 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1115_11080 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D D1115_03120 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D D1115_03295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_21345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_01400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D1115_05755 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1115_10945 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1115_10110 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1115_12695 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1115_02215 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1115_11640 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1115_12790 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D D1115_05265 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1115_09350 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D D1115_12285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1115_00095 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1115_00090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1115_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1115_03960 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1115_06605 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1115_02825 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_12265 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_06640 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1115_06645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1115_18965 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D D1115_00085 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D D1115_10635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D D1115_16925 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D D1115_01410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D1115_06730 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D D1115_09540 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D D1115_05580 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D D1115_03270 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D D1115_15190 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1115_01870 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D D1115_06195 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:vaf00194] D D1115_15220 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D1115_15225 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D1115_15230 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D1115_15235 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D1115_15240 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D1115_15245 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1115_15250 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D1115_15260 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:vaf03000] D D1115_22125 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D D1115_21195 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D D1115_22345 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D D1115_15695 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D D1115_21525 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D D1115_12220 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D D1115_09685 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D D1115_12720 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D D1115_01630 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D D1115_12410 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D D1115_02595 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D D1115_13450 leuO; transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D D1115_04730 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB D D1115_05535 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D D1115_06745 LysR family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D D1115_15685 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D D1115_15605 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D D1115_06070 LacI family DNA-binding transcriptional regulator K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D D1115_09870 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D D1115_03545 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D D1115_15840 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D D1115_15850 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D D1115_13910 cytR; DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D D1115_18540 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D D1115_04665 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D D1115_11720 treR; HTH-type transcriptional regulator TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D D1115_05190 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D D1115_14875 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D D1115_03520 ebgR; transcriptional regulator EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor D D1115_06345 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D D1115_08075 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D D1115_10120 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D D1115_03050 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D D1115_22275 FCD domain-containing protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D D1115_13425 GntR family transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D D1115_17745 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D D1115_14975 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D D1115_14340 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D D1115_03070 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D D1115_21820 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D D1115_20400 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D D1115_20875 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D D1115_19435 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D D1115_00640 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D D1115_14820 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D D1115_05550 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_22305 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_15935 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_22160 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D D1115_04810 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D D1115_01890 DNA-binding response regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D D1115_03395 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D D1115_18030 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D D1115_21470 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D D1115_05385 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D D1115_11075 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D D1115_01745 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D1115_01430 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D D1115_07265 fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D D1115_13325 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D D1115_12350 iscR; HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D D1115_01380 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D D1115_00500 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D D1115_17440 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D D1115_17185 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D D1115_12715 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D D1115_01580 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA D D1115_06135 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D D1115_00720 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D D1115_00965 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_17090 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_12605 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D D1115_18730 SgrR family transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator D D1115_13355 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D D1115_04350 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D1115_12785 sigma-54-dependent Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation D D1115_06880 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D D1115_05940 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D D1115_21090 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D D1115_03165 XRE family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D D1115_08285 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator D D1115_01560 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D D1115_22340 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D1115_03870 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D D1115_15265 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_16215 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_22415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_11115 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D D1115_15505 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH D D1115_21070 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D D1115_13580 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D D1115_09965 ROK family protein K15545 mlc; transcriptional regulator of PTS gene D D1115_16070 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D D1115_09295 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D D1115_00870 cadC; transcriptional regulator CadC K03765 cadC; transcriptional activator of cad operon D D1115_21460 hypothetical protein K03765 cadC; transcriptional activator of cad operon D D1115_04245 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D D1115_05860 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D D1115_05875 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D D1115_19845 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D D1115_12035 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D D1115_18215 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D D1115_10775 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D D1115_02520 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D D1115_03125 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1115_11865 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D D1115_11880 sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl C 03021 Transcription machinery [BR:vaf03021] D D1115_13765 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1115_00795 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1115_00800 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1115_14450 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D1115_13310 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D D1115_02800 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D D1115_03840 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D1115_04560 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D1115_02675 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D1115_20575 sigZ; RNA polymerase sigma factor SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D1115_00580 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D D1115_02095 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D D1115_04450 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D D1115_16735 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D1115_02045 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D D1115_03360 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D1115_11840 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D1115_00770 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D1115_13125 stringent starvation protein A K03599 sspA; stringent starvation protein A D D1115_13120 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D D1115_02680 anti-sigma E factor K03597 rseA; sigma-E factor negative regulatory protein RseA D D1115_02685 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D D1115_02690 transcriptional regulator K03803 rseC; sigma-E factor negative regulatory protein RseC D D1115_03125 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1115_03315 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D D1115_00345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D D1115_15980 transcriptional regulator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:vaf03019] D D1115_10075 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D D1115_02020 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D D1115_02705 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1115_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1115_01235 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D D1115_00335 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D D1115_18630 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_21225 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_22205 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_19945 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_10725 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1115_00310 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_03925 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1115_03385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D1115_00345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D D1115_01090 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D D1115_11980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_21290 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_01110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1115_01340 RNA chaperone Hfq K03666 hfq; host factor-I protein D D1115_12425 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D D1115_03115 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D D1115_12750 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D D1115_02835 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D D1115_01900 csrD; RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD D D1115_12895 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D D1115_13935 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D D1115_02195 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B D D1115_02080 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D D1115_06680 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D D1115_03135 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:vaf03011] D D1115_09925 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D1115_04025 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D1115_13860 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D1115_13770 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D1115_13805 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D1115_01690 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D1115_01530 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D1115_13820 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D1115_13145 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D1115_13895 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D1115_13775 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D1115_01525 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D1115_13780 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D1115_13825 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D1115_03380 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D1115_02985 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D1115_13845 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D1115_01700 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D1115_13870 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D1115_12710 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D1115_13295 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D1115_00780 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D1115_13875 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D D1115_13890 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D1115_13885 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D1115_13830 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D1115_13815 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D1115_01705 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D1115_00785 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D1115_00775 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D1115_00790 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D1115_13150 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D1115_13840 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D1115_13795 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D1115_13855 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D1115_13760 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D1115_13810 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D1115_03000 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D1115_06620 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D1115_13560 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D1115_13865 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D1115_13880 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D1115_13835 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D1115_13555 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D1115_14325 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D1115_13850 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D1115_13800 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D1115_13900 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D1115_10055 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D1115_14320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D1115_00030 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D1115_06615 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D1115_13785 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D1115_06020 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D D1115_16150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01795 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01825 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02350 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02355 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_12535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_15015 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00915 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00895 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_01805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_02340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_12555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_15040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_16120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_02345 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_12540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_15020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_16145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:vaf03009] D D1115_02705 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1115_01235 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D D1115_02710 GTPase Era K03595 era; GTPase D D1115_13550 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D D1115_03125 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1115_03360 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D1115_11840 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D1115_00770 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D1115_06045 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D D1115_13520 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D D1115_03260 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D D1115_00560 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D D1115_02530 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D D1115_07075 rsmF; 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D D1115_15275 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D1115_13080 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D D1115_13095 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D D1115_14815 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D D1115_10515 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D D1115_01390 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D D1115_03325 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D D1115_03865 methyltransferase domain-containing protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D D1115_11660 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D D1115_07000 methyltransferase domain-containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D D1115_05925 methyltransferase domain-containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D D1115_14830 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D D1115_07145 rlmL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D D1115_11780 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D D1115_12300 rlmN; bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D D1115_21795 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D D1115_05920 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_02050 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_15875 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_09605 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D D1115_10070 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D D1115_12575 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D D1115_05095 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D D1115_11425 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D D1115_03440 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D D1115_19500 N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D D1115_09290 30S ribosomal protein S5 alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D D1115_16350 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D D1115_04930 N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D D1115_02990 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D D1115_00975 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D D1115_04600 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D D1115_10075 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D D1115_02020 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D D1115_02515 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D D1115_13735 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D D1115_12830 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D D1115_01230 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D1115_21925 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D1115_12270 ribosome biogenesis GTPase Der K03977 engA; GTPase D D1115_18210 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D D1115_01345 hflX; GTPase HflX K03665 hflX; GTPase D D1115_14455 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D1115_03370 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D D1115_03355 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D D1115_18550 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D D1115_11655 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D D1115_03320 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D D1115_16245 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein D D1115_02060 ribosome-associated protein K09889 yjgA; ribosome-associated protein D D1115_07165 ribosome modulation factor K03812 rmf; ribosome modulation factor D D1115_02090 ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D D1115_12590 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A D D1115_11490 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D D1115_10060 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:vaf03016] D D1115_21725 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D D1115_13260 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D D1115_11375 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1115_03960 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1115_12695 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1115_11640 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1115_10110 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1115_11080 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D D1115_10945 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1115_12790 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D D1115_05265 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1115_02825 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_12265 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1115_09350 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D D1115_06605 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1115_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1115_05755 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1115_02215 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1115_12285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1115_06640 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1115_06645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1115_03295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_21345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_01400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D1115_14620 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D D1115_04895 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D1115_02455 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D D1115_03965 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D D1115_04700 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D D1115_03375 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D D1115_02780 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D D1115_12345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1115_01335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D1115_00010 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D D1115_15280 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D1115_14530 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D1115_00025 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D D1115_13090 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D1115_14355 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D D1115_12615 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D D1115_00095 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1115_00090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1115_03120 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D D1115_11430 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D D1115_02585 DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D D1115_01750 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D D1115_00970 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D D1115_10140 dusC; tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D D1115_11610 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D D1115_05255 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D D1115_05250 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D D1115_00650 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D D1115_02995 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D D1115_14460 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D D1115_12355 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D D1115_22170 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D D1115_01065 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D D1115_12825 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D D1115_16105 trmY; tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D D1115_04845 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D D1115_04005 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D D1115_05920 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_02050 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_15875 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D1115_05665 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D1115_07275 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D D1115_00110 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D D1115_01520 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D D1115_01515 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D D1115_01510 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D D1115_07015 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D D1115_12335 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D D1115_05525 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D D1115_04630 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D D1115_12385 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D D1115_06960 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D D1115_09345 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D D1115_06955 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D D1115_11755 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D D1115_01315 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D D1115_12380 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D D1115_11800 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D D1115_04110 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D D1115_22410 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D D1115_10925 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D D1115_13290 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D D1115_01320 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D D1115_03795 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D D1115_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1115_03385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:vaf03012] D D1115_18855 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D D1115_06610 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D1115_01455 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D D1115_04030 elongation factor Ts K02357 tsf; elongation factor Ts D D1115_01535 fusA; elongation factor G K02355 fusA; elongation factor G D D1115_03500 elongation factor G K02355 fusA; elongation factor G D D1115_21480 elongation factor G K02355 fusA; elongation factor G D D1115_11460 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D D1115_04040 ribosome recycling factor K02838 frr; ribosome recycling factor D D1115_11455 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D D1115_11485 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D D1115_05120 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D D1115_01130 efp; elongation factor P K02356 efp; elongation factor P D D1115_09595 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P D D1115_01155 elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D D1115_01125 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D D1115_04615 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D D1115_12795 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D D1115_20185 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:vaf03110] D D1115_05115 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D D1115_12565 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D D1115_10680 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D D1115_13925 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D D1115_11980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_21290 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_12325 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D D1115_19560 molecular chaperone K04046 yegD; hypothetical chaperone protein D D1115_01110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1115_11975 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D1115_13500 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D D1115_12330 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D D1115_14600 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D D1115_11990 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D1115_00080 heat-shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA D D1115_14595 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D D1115_01105 co-chaperone GroES K04078 groES; chaperonin GroES D D1115_13170 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D D1115_03330 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D1115_20165 molecular chaperone K07346 fimC; fimbrial chaperone protein D D1115_01190 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1115_01080 cpxP; periplasmic repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy D D1115_15415 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D D1115_21915 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D D1115_05195 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D D1115_21330 molecular chaperone K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D D1115_18240 hypothetical protein K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D D1115_03210 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_11400 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D D1115_03855 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D D1115_15370 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D D1115_05750 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D D1115_10665 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D D1115_01500 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D D1115_13750 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D D1115_12685 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D D1115_01475 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D D1115_20585 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D D1115_13510 surA; peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D D1115_00340 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D D1115_19090 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D D1115_11185 co-chaperone YbbN K05838 ybbN; putative thioredoxin D D1115_06125 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D D1115_10350 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D1115_20475 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D D1115_10130 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D D1115_12805 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D D1115_01045 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D D1115_04525 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:vaf04131] D D1115_12305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1115_00100 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D D1115_13340 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D D1115_10505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_20365 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_13420 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:vaf03051] D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:vaf03032] D D1115_04150 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D1115_00840 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D D1115_10670 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1115_08140 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1115_09920 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1115_00055 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1115_01715 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_04100 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1115_00060 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1115_10005 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1115_06715 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_09380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_05455 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_01000 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_22880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04750 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1115_03435 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D D1115_04095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1115_01680 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1115_11050 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D D1115_09485 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D1115_00070 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D1115_13180 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1115_13185 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] C 03036 Chromosome and associated proteins [BR:vaf03036] D D1115_02705 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1115_00840 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D D1115_10670 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1115_08140 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1115_09920 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1115_00055 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1115_13110 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D D1115_20080 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D D1115_00965 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_17090 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_01340 RNA chaperone Hfq K03666 hfq; host factor-I protein D D1115_02595 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D D1115_05550 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_22305 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_15935 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D1115_10410 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D D1115_05225 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D D1115_05220 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D D1115_05215 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D D1115_13025 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D1115_02765 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D D1115_00570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1115_13070 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1115_13075 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D D1115_13030 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D D1115_13045 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D D1115_00575 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D D1115_13020 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1115_11220 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D D1115_02625 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D D1115_13940 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D D1115_07140 cell division protein ZapC K18657 zapC; cell division protein ZapC D D1115_03010 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D D1115_13160 cell division protein ZapE K06916 zapE; cell division protein ZapE D D1115_13745 lysine transporter LysM K07269 ytfB; cell division protein YtfB D D1115_01325 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D1115_05410 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14980 vmeC; multidrug efflux RND transporter periplasmic adaptor subunit VmeC K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_20200 vmeY; multidrug efflux RND transporter periplasmic adaptor subunit VmeY K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10540 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10885 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D D1115_10890 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D D1115_10895 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D D1115_06280 hypothetical protein K13053 sulA; cell division inhibitor SulA D D1115_14340 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D D1115_11050 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D D1115_02000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D1115_02005 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D D1115_02010 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D D1115_11670 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D D1115_15310 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D D1115_04475 ParA family protein K03496 parA; chromosome partitioning protein D D1115_15270 ParA family protein K03496 parA; chromosome partitioning protein D D1115_22425 ParA family protein K03496 parA; chromosome partitioning protein D D1115_15265 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_16215 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_22415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_13180 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1115_13185 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D1115_15280 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D1115_15275 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D1115_12810 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D D1115_10105 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D D1115_02295 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D D1115_14705 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:vaf03400] D D1115_15700 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D D1115_17255 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D D1115_12855 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D D1115_02450 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D1115_10315 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D1115_13000 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D D1115_21560 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D D1115_08945 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D D1115_16480 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D D1115_15695 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D D1115_05895 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D D1115_14305 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D1115_05065 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1115_12865 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D D1115_12800 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1115_11215 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1115_14715 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1115_01880 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D1115_10270 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D1115_09575 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D1115_00280 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1115_00795 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1115_00800 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1115_13765 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1115_14450 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D1115_04940 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D1115_02805 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D1115_12760 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D D1115_12255 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D1115_11815 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D1115_04100 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1115_00060 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1115_10005 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1115_06715 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_09380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_05455 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_01000 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_22880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1115_04750 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1115_03435 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_01680 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1115_03615 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D D1115_03610 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D D1115_03620 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D D1115_02815 recA; recombinase RecA K03553 recA; recombination protein RecA D D1115_05275 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D1115_05280 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D1115_05270 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1115_13905 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D D1115_01695 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D D1115_05070 prepilin peptidase K04067 priC; primosomal replication protein N'' D D1115_18365 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D D1115_18360 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D D1115_03495 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D D1115_14465 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D D1115_02715 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D1115_04760 recR; recombination protein RecR K06187 recR; recombination protein RecR D D1115_12000 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D D1115_12495 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D D1115_06420 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D D1115_09485 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D1115_00070 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D1115_00840 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D D1115_10670 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1115_00965 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_17090 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D1115_08140 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1115_09920 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1115_00310 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_03925 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D1115_03920 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D D1115_17045 Y-family DNA polymerase K03502 umuC; DNA polymerase V D D1115_17050 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D D1115_00620 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D1115_09585 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D D1115_09945 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA D D1115_09950 DNA polymerase Y family protein K14161 imuB; protein ImuB D D1115_02820 recX; recombination regulator RecX K03565 recX; regulatory protein D D1115_14970 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D D1115_05080 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D D1115_10930 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D D1115_09500 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1115_09505 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:vaf03029] D D1115_13135 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1115_06610 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D1115_04030 elongation factor Ts K02357 tsf; elongation factor Ts D D1115_01535 fusA; elongation factor G K02355 fusA; elongation factor G D D1115_03500 elongation factor G K02355 fusA; elongation factor G D D1115_21480 elongation factor G K02355 fusA; elongation factor G D D1115_02710 GTPase Era K03595 era; GTPase D D1115_03295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_21345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1115_11640 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1115_05265 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1115_10945 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1115_01895 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1115_04065 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D1115_11980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_21290 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_11990 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D1115_01110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1115_01105 co-chaperone GroES K04078 groES; chaperonin GroES D D1115_11975 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D1115_12345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1115_12330 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D D1115_10350 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D1115_10105 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D D1115_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1115_17540 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D D1115_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1115_00015 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1115_15395 SCO family protein K07152 SCO1; protein SCO1 D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:vaf02000] D D1115_04975 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D D1115_08180 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D D1115_08185 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D D1115_19340 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D D1115_06215 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D D1115_06220 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D D1115_07155 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D D1115_18940 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D D1115_18935 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D D1115_18930 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D D1115_19925 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D D1115_07410 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D D1115_07415 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D D1115_07420 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D D1115_19465 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D D1115_19460 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D D1115_19455 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D D1115_03185 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D D1115_22625 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D D1115_03195 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D D1115_13615 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D D1115_13610 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D D1115_13605 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D D1115_07310 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_07315 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_10200 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D D1115_07305 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D D1115_07300 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D D1115_07295 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D D1115_07880 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D D1115_07855 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D D1115_07860 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D D1115_07865 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D D1115_06695 proX; proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_20740 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_17760 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_21505 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D D1115_06700 proW; proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D D1115_17765 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D D1115_21510 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D D1115_06705 proV; proline/glycine betaine ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_17770 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_21515 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D D1115_16075 ABC transporter ATP-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D D1115_16080 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D D1115_16085 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D D1115_05965 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein D D1115_05960 thiamine ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein D D1115_05955 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein D D1115_20855 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D D1115_20850 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D D1115_20845 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D D1115_20865 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D D1115_13375 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D D1115_13370 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D D1115_13365 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D D1115_05795 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D D1115_02135 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D D1115_02130 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D D1115_02125 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D D1115_02140 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D D1115_02145 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D D1115_12475 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_17275 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_19870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1115_17280 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D1115_12455 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1115_17285 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1115_12450 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1115_17290 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1115_19645 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D D1115_19635 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein D D1115_19640 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein D D1115_19650 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D D1115_07040 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D D1115_07035 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D D1115_07030 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D D1115_07025 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D D1115_05050 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D D1115_05060 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein D D1115_05055 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D D1115_05045 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D D1115_11740 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D D1115_11735 ABC transporter permease K02072 metI; D-methionine transport system permease protein D D1115_11730 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D D1115_10165 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D D1115_10160 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D D1115_10155 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D D1115_00045 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D D1115_00040 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D D1115_00035 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D D1115_18560 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D D1115_18555 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D D1115_18565 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D D1115_18570 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D D1115_10225 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D D1115_10220 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D D1115_10215 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D D1115_10210 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D D1115_10205 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D D1115_05855 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D D1115_05850 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D D1115_05845 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D D1115_05840 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D D1115_05835 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D D1115_03245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_15810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_14920 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_19810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1115_03240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1115_14915 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1115_03235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_15820 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_14910 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1115_03230 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14390 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_15825 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14925 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_19825 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1115_14385 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1115_03225 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1115_14395 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D D1115_09900 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D D1115_14405 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D D1115_14400 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein D D1115_20635 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D D1115_20640 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D D1115_22025 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D D1115_22035 ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein D D1115_22030 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D D1115_22040 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D D1115_08025 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D D1115_08020 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D D1115_10975 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D D1115_10985 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D D1115_17205 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D D1115_17195 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D D1115_02230 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D D1115_02100 lipopolysaccharide ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D1115_04950 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D D1115_04960 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D D1115_04955 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D1115_04510 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D D1115_04500 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D D1115_04495 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D1115_00575 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D D1115_00570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1115_06755 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D1115_06760 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D1115_03095 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D1115_15440 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D D1115_03090 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D D1115_15445 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D D1115_06090 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D D1115_15340 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D D1115_13685 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D D1115_22115 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D D1115_18785 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D D1115_06085 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D1115_15335 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D1115_13680 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D1115_22110 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D1115_20100 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D1115_06250 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D D1115_01215 SLC13/DASS family transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D D1115_12725 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D D1115_07495 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D D1115_06690 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D D1115_15865 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_00630 dinF; MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump D D1115_06080 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_01095 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_20355 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_22130 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_04870 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_03400 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_18975 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_05475 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D1115_18005 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D D1115_18180 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D D1115_01010 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D D1115_00515 MFS transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D D1115_06050 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1115_00250 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1115_07820 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1115_16325 emrD; multidrug transporter EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D D1115_07775 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D D1115_15975 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D D1115_22050 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D D1115_19095 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D D1115_07845 tsgA; MFS transporter TsgA K06141 tsgA; MFS transporter, TsgA protein D D1115_11245 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D D1115_12745 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D D1115_11240 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D1115_02075 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D D1115_18535 HPr family phosphocarrier protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D D1115_11250 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D D1115_09995 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D D1115_11085 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D D1115_04670 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D D1115_11715 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D D1115_18525 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D D1115_20915 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D D1115_20910 PTS fructose transporter subunit IIA K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D D1115_21600 PTS fructose transporter subunit IIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D D1115_08080 PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D D1115_15635 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D D1115_15620 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D D1115_15625 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D D1115_15630 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D D1115_02085 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D D1115_20920 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D D1115_04765 aquaporin Z K06188 aqpZ; aquaporin Z D D1115_05345 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel D D1115_10380 ion transporter K10716 kch; voltage-gated potassium channel D D1115_19055 potassium channel protein K10716 kch; voltage-gated potassium channel D D1115_03180 ammonium transporter K03320 amt; ammonium transporter, Amt family D D1115_19615 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_19365 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_20885 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1115_13125 stringent starvation protein A K03599 sspA; stringent starvation protein A D D1115_17310 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D D1115_07020 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D D1115_05790 focA; formate transporter FocA K06212 focA; formate transporter D D1115_18655 focA; formate transporter FocA K06212 focA; formate transporter D D1115_19130 formate/nitrite transporter family protein K21993 fdhC; formate transporter D D1115_16535 mechanosensitive ion channel protein MscS K22051 mscM; miniconductance mechanosensitive channel D D1115_02580 mscS; small-conductance mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel D D1115_04795 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D D1115_17130 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D D1115_02070 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D D1115_20425 magnesium transporter K06213 mgtE; magnesium transporter D D1115_11810 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D D1115_16730 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D1115_11805 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D1115_16725 chemotaxis protein K02557 motB; chemotaxis protein MotB D D1115_01370 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX D D1115_10330 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D D1115_14420 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D D1115_14425 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D D1115_16285 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D D1115_16290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D D1115_20620 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D D1115_16295 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D D1115_14430 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D D1115_05310 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D D1115_05315 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D D1115_00205 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D D1115_00835 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D D1115_02970 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D D1115_03310 porin K08720 ompU; outer membrane protein OmpU D D1115_15805 maltoporin K02024 lamB; maltoporin D D1115_21985 maltoporin K02024 lamB; maltoporin D D1115_04660 carbohydrate porin K16077 scrY; sucrose porin D D1115_11370 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D1115_16545 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D1115_17575 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D1115_17370 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D1115_04545 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein D D1115_04550 transporter K06076 fadL; long-chain fatty acid transport protein D D1115_18705 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D D1115_03820 hypothetical protein K05517 tsx; nucleoside-specific channel-forming protein D D1115_00655 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D D1115_04650 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D D1115_22015 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D D1115_18825 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D D1115_14410 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D1115_16275 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D1115_19385 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_06980 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system D D1115_17940 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D D1115_22940 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D D1115_19015 porin K07267 oprB; porin D D1115_22280 outer membrane porin, OprD family K16140 uidC; putative glucuronide porin D D1115_04065 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D1115_12275 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D D1115_04255 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D D1115_12580 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D D1115_12005 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D D1115_13650 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D D1115_13645 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D D1115_11395 porin K22110 kdgM; oligogalacturonate-specific porin family protein D D1115_02105 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D D1115_02110 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D D1115_13505 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D D1115_11645 luciferase K03643 lptE; LPS-assembly lipoprotein D D1115_11625 corC; magnesium/cobalt transporter CorC K06189 corC; hemolysin (HlyC) family protein D D1115_08110 hypothetical protein K06518 cidA; holin-like protein D D1115_09845 melB; melibiose:sodium transporter MelB K11104 melB; melibiose permease D D1115_20940 melB; melibiose:sodium transporter MelB K11104 melB; melibiose permease D D1115_21945 putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter D D1115_00880 cadaverine/lysine antiporter K03757 cadB; cadaverine:lysine antiporter D D1115_08000 amino acid permease K20265 gadC; glutamate:GABA antiporter D D1115_01085 fieF; CDF family cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D D1115_21010 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D D1115_14985 vmeD; multidrug efflux RND transporter permease subunit VmeD K18138 acrB; multidrug efflux pump D D1115_20195 vmeZ; multidrug efflux RND transporter permease subunit VmeZ K18138 acrB; multidrug efflux pump D D1115_15945 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D D1115_18320 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D D1115_14860 ligand-binding protein SH3 K11742 mdtI; spermidine export protein MdtI D D1115_14865 QacE family quaternary ammonium compound efflux SMR transporter K11743 mdtJ; spermidine export protein MdtJ D D1115_22010 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D D1115_00305 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D D1115_18300 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D D1115_07795 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D D1115_07800 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D D1115_10340 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter D D1115_03160 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D D1115_14845 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D D1115_17035 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D D1115_01050 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D D1115_21375 BCCT family transporter K05020 opuD; glycine betaine transporter D D1115_02120 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D D1115_22330 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D D1115_01025 cation acetate symporter K14393 actP; cation/acetate symporter D D1115_21930 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D D1115_15435 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D D1115_15450 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D D1115_21360 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D D1115_10125 nhaB; Na(+)/H(+) antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D D1115_10390 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D D1115_05685 tet(35); tetracycline efflux Na+/H+ antiporter family transporter Tet(35) K18218 tet35; tetracycline resistance efflux pump D D1115_01850 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D D1115_01465 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D D1115_20545 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D D1115_01460 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D D1115_20540 flavodoxin family protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D D1115_10715 Ktr system potassium transporter B K03498 trkH; trk/ktr system potassium uptake protein D D1115_00145 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D D1115_10720 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D D1115_15115 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D D1115_20430 cytosine permease K10974 codB; cytosine permease D D1115_04200 uracil-xanthine permease K02824 uraA; uracil permease D D1115_14475 uracil-xanthine permease K16345 xanP; xanthine permease XanP D D1115_11900 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D D1115_19920 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D D1115_08205 amino acid permease K03834 tyrP; tyrosine-specific transport protein D D1115_17445 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein D D1115_09330 septum formation protein K03837 sdaC; serine transporter D D1115_19505 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D D1115_17665 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D D1115_03510 chrA; chromate efflux transporter K07240 chrA; chromate transporter D D1115_03085 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D D1115_10080 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D D1115_17435 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter D D1115_18190 dcuC; anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D D1115_22595 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D D1115_23135 hypothetical protein K16695 wzxC; lipopolysaccharide exporter D D1115_12705 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D1115_05425 AEC family transporter K13936 mdcF; malonate transporter and related proteins D D1115_02590 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D D1115_15990 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D D1115_00495 homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D D1115_09160 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D D1115_00295 LysE family translocator K05835 rhtC; threonine efflux protein D D1115_20375 lysine transporter LysE K05835 rhtC; threonine efflux protein D D1115_04235 AI-2E family transporter K03548 perM; putative permease D D1115_00325 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D D1115_01035 MarC family protein K05595 marC; multiple antibiotic resistance protein D D1115_21790 MarC family protein K05595 marC; multiple antibiotic resistance protein D D1115_10375 YchE family NAAT transporter K05595 marC; multiple antibiotic resistance protein D D1115_13045 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D D1115_00100 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D D1115_13345 glutathione synthetase K15383 K15383; MtN3 and saliva related transmembrane protein D D1115_14435 energy transducer TonB K03832 tonB; periplasmic protein TonB D D1115_16300 energy transducer TonB K03832 tonB; periplasmic protein TonB D D1115_05330 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D D1115_05320 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D D1115_05325 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D D1115_02935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D D1115_02930 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D D1115_02925 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D D1115_09830 cytochrome C biogenesis protein K08344 scsB; suppressor for copper-sensitivity B D D1115_21325 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D D1115_21320 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D D1115_21315 dimethylsulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D D1115_05810 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D D1115_05805 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D D1115_05195 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D D1115_16045 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D D1115_16050 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D D1115_15970 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D D1115_22055 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D D1115_21005 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D D1115_22370 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D D1115_21410 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D D1115_20395 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D D1115_05410 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14980 vmeC; multidrug efflux RND transporter periplasmic adaptor subunit VmeC K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_20200 vmeY; multidrug efflux RND transporter periplasmic adaptor subunit VmeY K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10540 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_03280 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D D1115_17935 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D D1115_22950 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D D1115_22945 chain length determinant family protein K25590 epsF; protein tyrosine kinase modulator D D1115_07640 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator D D1115_10965 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D D1115_10960 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B D D1115_10955 iron transporter FeoC K10123 feoC; putative ferrous iron transport protein C D D1115_14790 uspB; universal stress protein UspB K06144 uspB; universal stress protein B D D1115_04520 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D D1115_01120 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:vaf02044] D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_22370 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D D1115_06980 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system D D1115_13255 AAA family ATPase K02450 gspA; general secretion pathway protein A D D1115_14585 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D D1115_14580 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D D1115_14575 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D D1115_14570 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D D1115_14555 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D D1115_14550 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D D1115_14545 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D D1115_14540 type II secretion system protein M K02462 gspM; general secretion pathway protein M D D1115_14535 type II secretion system protein N K02463 gspN; general secretion pathway protein N D D1115_03020 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D1115_03035 pilin K02650 pilA; type IV pilus assembly protein PilA D D1115_03030 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D D1115_03025 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D D1115_11970 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D D1115_08015 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D D1115_01645 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D D1115_01650 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO D D1115_01655 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D D1115_01660 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D D1115_02505 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D D1115_02510 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D D1115_11950 type IV pilin K02671 pilV; type IV pilus assembly protein PilV D D1115_11960 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D D1115_11965 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D D1115_01950 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D D1115_18290 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D D1115_01960 type II secretion system protein K10926 mshC; MSHA pilin protein MshC D D1115_01965 MSHA biogenesis protein MshD K10927 mshD; MSHA pilin protein MshD D D1115_01935 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE D D1115_01945 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF D D1115_01905 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D D1115_01910 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D D1115_01915 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK D D1115_01920 mshL; pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D D1115_01925 DUF2075 domain-containing protein K12283 mshM; MSHA biogenesis protein MshM D D1115_01930 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN D D1115_01975 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP D D1115_02490 YggT family protein K02221 yggT; YggT family protein D D1115_10660 transporter K02237 comEA; competence protein ComEA D D1115_20205 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12] D D1115_04970 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D D1115_16790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D1115_04430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_16795 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_16840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D1115_04380 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D D1115_16850 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D D1115_04385 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_16855 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_04410 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_16815 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_04415 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_16810 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_04420 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_16805 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_04425 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_16800 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_12805 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D D1115_20165 molecular chaperone K07346 fimC; fimbrial chaperone protein D D1115_01190 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1115_12370 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_20290 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D1115_00765 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1115_12365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_20285 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D1115_03340 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1115_13790 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1115_02980 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1115_12375 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1115_00015 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1115_14750 tatA; twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D D1115_14745 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1115_14740 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:vaf02042] D D1115_17660 tellurium resistance protein K11041 eta; exfoliative toxin A/B D D1115_03605 C4-dicarboxylate ABC transporter K11041 eta; exfoliative toxin A/B D D1115_00835 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D D1115_02970 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D D1115_15130 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:vaf02022] D D1115_12480 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D1115_12485 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D D1115_14480 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1115_14485 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D D1115_20500 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D D1115_20495 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D D1115_01070 cpxA; two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D D1115_01075 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_16265 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D D1115_18075 torS; TMAO reductase system sensor histidine kinase/response regulator TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D D1115_05200 torR; two-component system response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D D1115_12920 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D D1115_06030 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D1115_09400 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D D1115_20230 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D D1115_20225 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D D1115_02730 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D D1115_09580 uvrY; two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D D1115_07915 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D D1115_09405 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D D1115_12670 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D D1115_12675 yehT; two-component system response regulator YehT K02477 K02477; two-component system, LytTR family, response regulator D D1115_14655 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D1115_14660 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D D1115_22360 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D D1115_16380 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D D1115_07400 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D D1115_23050 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D D1115_04465 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D1115_04455 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_08255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_04470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D1115_11325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_09960 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20590 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_18280 chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20325 response regulator K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-] D D1115_10260 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D D1115_10265 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO D D1115_05995 DNA-binding response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D D1115_04355 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D D1115_04360 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_16830 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_22555 response regulator K15012 regA; two-component system, response regulator RegA D D1115_03710 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D D1115_19475 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:vaf02035] D D1115_04465 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D1115_04480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_04485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D D1115_01740 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D D1115_11320 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D1115_04470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D1115_04455 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_08255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D1115_04460 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D D1115_11325 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_09960 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_20590 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_18280 chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D D1115_05915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_07005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_01210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_04890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_02400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_09730 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_10745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_13225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_20190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_21780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D1115_17585 PAS domain-containing protein K03776 aer; aerotaxis receptor D D1115_04380 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D D1115_16850 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D D1115_04385 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_16855 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D1115_04390 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D D1115_04415 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_16810 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D1115_04420 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_16805 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D1115_04425 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_16800 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D D1115_16790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D1115_04430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_16795 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D1115_04375 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_16845 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D1115_04410 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_16815 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D1115_16840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D1115_11280 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D1115_16645 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D1115_11330 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D D1115_16605 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D D1115_11285 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D1115_16640 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D1115_00595 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D D1115_16740 flagellar protein K02415 fliL; flagellar protein FliL D D1115_04365 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D1115_16835 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D1115_04395 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D D1115_11315 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D1115_16610 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D1115_11310 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D1115_16615 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D1115_11305 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D D1115_16620 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D D1115_11295 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D D1115_11290 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D1115_16635 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D1115_11275 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D D1115_16650 flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ D D1115_11300 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D D1115_16625 flaE; flagellar basal body protein FlaE K02390 flgE; flagellar hook protein FlgE D D1115_11270 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D1115_16655 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D1115_11265 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D D1115_16660 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D D1115_11340 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D D1115_16595 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D D1115_11355 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT D D1115_11350 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO D D1115_11345 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D D1115_01370 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX D D1115_10330 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D D1115_04315 flagellin K02406 fliC; flagellin D D1115_04320 flagellin K02406 fliC; flagellin D D1115_11255 flagellin K02406 fliC; flagellin D D1115_11260 flagellin K02406 fliC; flagellin D D1115_16780 Lateral flagellin K02406 fliC; flagellin D D1115_04330 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D D1115_16765 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2 D D1115_04340 fliS; flagella export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D D1115_16760 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D D1115_04450 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D D1115_16735 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D1115_11810 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D D1115_16730 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D1115_11805 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D1115_16725 chemotaxis protein K02557 motB; chemotaxis protein MotB D D1115_04350 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D1115_04355 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D D1115_04360 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_16830 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D D1115_11335 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D D1115_16600 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D D1115_04325 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG D D1115_04440 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D D1115_04445 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D D1115_02505 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D D1115_02510 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D D1115_03035 pilin K02650 pilA; type IV pilus assembly protein PilA D D1115_03030 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D D1115_03025 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D D1115_03020 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D1115_08015 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D D1115_01660 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D D1115_01655 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D D1115_01650 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO D D1115_01645 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D D1115_11950 type IV pilin K02671 pilV; type IV pilus assembly protein PilV D D1115_11960 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D D1115_11970 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D D1115_20165 molecular chaperone K07346 fimC; fimbrial chaperone protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:vaf04812] D D1115_02000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D1115_13020 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1115_13025 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D1115_10885 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D D1115_10890 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D D1115_10895 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D D1115_04475 ParA family protein K03496 parA; chromosome partitioning protein D D1115_15270 ParA family protein K03496 parA; chromosome partitioning protein D D1115_22425 ParA family protein K03496 parA; chromosome partitioning protein D D1115_15265 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_16215 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1115_22415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:vaf04147] D D1115_11135 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D D1115_02760 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1115_10505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_20365 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1115_02565 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1115_13420 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1115_03855 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D D1115_12415 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D D1115_01110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1115_11980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_21290 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1115_01735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1115_12250 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D1115_04895 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D1115_10905 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_03505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D1115_12725 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D D1115_22700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_20275 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_23190 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D1115_11130 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D1115_04745 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D D1115_13630 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D D1115_03535 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D D1115_21875 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D D1115_03570 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D D1115_14645 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1115_14730 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D D1115_07695 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D1115_20025 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D D1115_19530 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D D1115_02605 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D1115_00855 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1115_03065 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1115_19590 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D D1115_22780 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D D1115_06780 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1115_13975 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1115_18395 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:vaf02048] D D1115_06420 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D D1115_06415 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D D1115_06825 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D D1115_06480 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D D1115_06445 csx16; CRISPR-associated protein Csx16 K19145 csx16; CRISPR-associated protein Csx16 D D1115_02305 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D D1115_12065 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D D1115_02290 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D D1115_02285 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D D1115_12045 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D D1115_01680 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1115_10825 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D D1115_10830 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D D1115_08925 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D D1115_08920 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD D D1115_22720 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D D1115_22715 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D D1115_05875 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D D1115_05870 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D D1115_08710 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D D1115_08705 plasmid maintenance protein CcdB K19164 ccdA; antitoxin CcdA D D1115_08355 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D D1115_09030 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D D1115_05480 DUF386 family protein K19334 tabA; biofilm protein TabA D D1115_13020 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1115_02000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D1115_13180 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1115_13185 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D1115_11375 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1115_02660 succinate dehydrogenase assembly factor 2 family protein K09159 cptB; antitoxin CptB D D1115_12345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:vaf01504] D D1115_05685 tet(35); tetracycline efflux Na+/H+ antiporter family transporter Tet(35) K18218 tet35; tetracycline resistance efflux pump D D1115_22400 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D D1115_05410 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14980 vmeC; multidrug efflux RND transporter periplasmic adaptor subunit VmeC K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_20200 vmeY; multidrug efflux RND transporter periplasmic adaptor subunit VmeY K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_10540 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D1115_14985 vmeD; multidrug efflux RND transporter permease subunit VmeD K18138 acrB; multidrug efflux pump D D1115_20195 vmeZ; multidrug efflux RND transporter permease subunit VmeZ K18138 acrB; multidrug efflux pump D D1115_20395 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D D1115_18030 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D D1115_13210 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D D1115_21410 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vaf00537] D D1115_19530 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:vaf03100] D D1115_12550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_00935 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_01815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_16135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1115_02850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_14960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_11360 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_10855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1115_02375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02385 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_02420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_10275 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1115_00195 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_00695 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_00950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_01830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_02360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_12530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1115_09565 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19160 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19170 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_19200 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1115_11540 tRNA-OTHER K14223 tRNA-Gln; tRNA Gln D D1115_11590 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11560 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_11570 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1115_12545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_00165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_15035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_16125 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1115_01240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_00745 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_17960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01250 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_01300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_09550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_09560 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_19175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1115_14945 tRNA-His K14226 tRNA-His; tRNA His D D1115_14955 tRNA-His K14226 tRNA-His; tRNA His D D1115_00385 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_00930 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_01810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1115_03345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_09555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_16430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_11595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_19165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_19180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_02245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1115_00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_00900 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_15030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_16130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1115_11500 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01245 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01255 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01265 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01285 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01295 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01305 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_01310 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_03350 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11515 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11550 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_11580 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_13315 tRNA-Met K14230 tRNA-Met; tRNA Met D D1115_02410 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02425 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_02435 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1115_11410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_14940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_14950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1115_05365 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_02845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_00405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_10425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_16155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_19880 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_02855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1115_00750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_00735 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_02430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1115_00700 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1115_12525 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1115_00740 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10550 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10555 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10565 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10570 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_10575 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_12185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1115_00180 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_07665 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_07660 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_00905 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_15025 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_16140 tRNA-Val K14237 tRNA-Val; tRNA Val D D1115_01785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00895 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_01805 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_02340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_12555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_15040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_16120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1115_00685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_00940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_01820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_02345 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_12540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_15020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_16145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1115_16150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01795 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_01825 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02350 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_02355 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_12535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_15015 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_00915 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1115_04840 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D1115_13090 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D1115_12025 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D D1115_17015 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D D1115_20070 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D D1115_18335 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D D1115_00505 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D D1115_10475 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D D1115_20880 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D D1115_22820 acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D D1115_22805 acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D D1115_19600 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D D1115_23180 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D D1115_02940 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D1115_20735 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D1115_06675 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D D1115_22145 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D D1115_13655 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D D1115_21590 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D D1115_16495 msrB; peptide-methionine (R)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D D1115_10500 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D D1115_21150 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D D1115_10190 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D D1115_04240 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D1115_22140 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D D1115_04300 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D D1115_21110 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D D1115_01375 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D D1115_14795 non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D D1115_21685 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D D1115_21080 norW; NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D D1115_04220 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D D1115_18980 anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D D1115_05020 pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D D1115_08230 yjjW; YjjW family glycine radical enzyme activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D D1115_05930 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D D1115_02790 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D D1115_20610 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342] D D1115_16505 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D D1115_17345 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D D1115_15915 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D D1115_11630 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D D1115_03425 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D D1115_02205 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D D1115_05125 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D D1115_07605 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D D1115_07445 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D D1115_10650 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D D1115_00470 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D D1115_12735 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D D1115_03905 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D D1115_19605 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D D1115_17020 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D D1115_22860 hypothetical protein K22424 E2.7.3.13; glutamine kinase [EC:2.7.3.13] D D1115_21300 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D D1115_13220 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D D1115_06830 cas1; CRISPR-associated endonuclease Cas1 K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D D1115_10700 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D D1115_17515 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D D1115_05305 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D1115_09615 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D D1115_04590 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D D1115_08245 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D D1115_02535 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D D1115_17055 endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D D1115_03450 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D D1115_14735 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D D1115_10000 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D D1115_11885 frsA; esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-] D D1115_15835 DUF5011 domain-containing protein K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6] D D1115_08085 mannosylglycerate hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-] D D1115_22930 DUF3473 domain-containing protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D D1115_02030 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D D1115_20870 ASCH domain-containing protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D D1115_02165 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D D1115_09720 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D D1115_13230 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25] D D1115_14045 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D D1115_18105 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D D1115_19210 DUF3763 domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D D1115_17325 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D D1115_17025 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D D1115_22815 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D D1115_17695 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D D1115_22800 DNA-binding protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D D1115_22810 acyl dehydratase K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D D1115_15465 hypothetical protein K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21] D D1115_15565 hypothetical protein K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21] D D1115_15575 chondroitin lyase K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21] D D1115_05485 chondroitin lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D D1115_05490 chondroitin lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D D1115_03805 csdA; cysteine desulfurase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D D1115_17030 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D D1115_13625 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D D1115_07505 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D D1115_10300 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D D1115_10295 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D D1115_10290 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D D1115_03875 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D D1115_03880 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D D1115_16415 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D D1115_03885 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D D1115_03890 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D D1115_03895 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D D1115_03900 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D D1115_07250 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D D1115_04875 zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D D1115_03130 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D D1115_18070 torT; TMAO reductase system periplasmic protein TorT K11930 torT; periplasmic protein TorT D D1115_12395 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D D1115_07375 sufurtransferase FdhD K02379 fdhD; FdhD protein D D1115_04850 ferredoxin family protein K05524 fdxA; ferredoxin D D1115_09510 (2Fe-2S)-binding protein K11107 yfaE; ferredoxin D D1115_10310 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D D1115_10285 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D D1115_00005 mioC; FMN-binding protein MioC K06205 mioC; MioC protein D D1115_12815 fldB; flavodoxin FldB K03840 fldB; flavodoxin II D D1115_12340 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D D1115_16875 cytochrome b562 family protein K15536 cybC; soluble cytochrome b562 D D1115_21085 anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D D1115_20240 nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D D1115_20235 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D D1115_05800 torE; trimethylamine N-oxide reductase system protein TorE K02571 napE; periplasmic nitrate reductase NapE D D1115_11065 fldA; flavodoxin FldA K03839 fldA; flavodoxin I D D1115_20255 cytochrome C K02569 napC; cytochrome c-type protein NapC D D1115_17175 napG; ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG D D1115_17180 napH; quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH D D1115_19595 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D D1115_22775 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D D1115_11225 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D D1115_02500 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D D1115_00410 heme biosynthesis protein HemY K02498 hemY; HemY protein D D1115_14755 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D D1115_14760 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D D1115_14995 cytoplasmic protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D D1115_03420 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D D1115_03970 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein D D1115_11945 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others D D1115_00260 DoxX family protein K15977 K15977; putative oxidoreductase D D1115_18835 bifunctional acyl-CoA synthetase/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D D1115_05105 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein D D1115_22150 cold-shock protein K03704 cspA; cold shock protein D D1115_21115 cold-shock protein K03704 cspA; cold shock protein D D1115_20120 cold-shock protein K03704 cspA; cold shock protein D D1115_00805 sigma D regulator K07740 rsd; regulator of sigma D D D1115_03175 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D D1115_14500 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D D1115_13995 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D D1115_06000 META domain-containing protein K03668 hslJ; heat shock protein HslJ D D1115_05110 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D D1115_10690 trigger factor K03545 tig; trigger factor D D1115_19780 urease accessory protein UreF K03188 ureF; urease accessory protein D D1115_19805 urease accessory protein UreD K03190 ureD; urease accessory protein D D1115_12020 SsrA-binding protein K03664 smpB; SsrA-binding protein D D1115_15175 ATP-dependent protease K07391 comM; magnesium chelatase family protein D D1115_08215 SM-20 protein K07394 K07394; SM-20-related protein D D1115_10345 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D D1115_16500 OsmC family protein K07397 yhfA; putative redox protein D D1115_14520 nfuA; iron-sulfur cluster biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D D1115_11155 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D D1115_17785 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D D1115_04825 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D D1115_11775 flap endonuclease Xni K01146 xni; protein Xni D D1115_14770 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D D1115_18670 DUF2813 domain-containing protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D D1115_13105 YraN family protein K07460 yraN; putative endonuclease D D1115_20335 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D D1115_05565 replication-associated recombination protein A K07478 ycaJ; putative ATPase D D1115_12085 recombinase family protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D D1115_06170 helix-turn-helix domain-containing protein K07483 K07483; transposase D D1115_09480 helix-turn-helix domain-containing protein K07483 K07483; transposase D D1115_23155 helix-turn-helix domain-containing protein K07483 K07483; transposase D D1115_17000 hypothetical protein K07484 K07484; transposase D D1115_17005 IS66 family transposase K07484 K07484; transposase D D1115_12080 IS3 family transposase K07497 K07497; putative transposase D D1115_06165 IS3 family transposase K07497 K07497; putative transposase D D1115_09470 IS3 family transposase K07497 K07497; putative transposase D D1115_23160 transposase K07497 K07497; putative transposase D D1115_23165 hypothetical protein K07497 K07497; putative transposase D D1115_09475 transposase K07497 K07497; putative transposase D D1115_16935 DUF3596 domain-containing protein K14059 int; integrase D D1115_16165 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D D1115_05865 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D D1115_21605 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D D1115_04755 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D D1115_16475 DASH family cryptochrome K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D D1115_15770 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D D1115_22260 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D D1115_06720 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D D1115_10530 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D D1115_09390 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D D1115_21145 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D D1115_11120 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D D1115_13240 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D D1115_06060 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D D1115_05435 transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D D1115_05510 transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D D1115_05910 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D D1115_03940 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D D1115_12235 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D D1115_12840 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D D1115_07975 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D D1115_12820 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D D1115_16390 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D D1115_16440 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D D1115_10865 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D D1115_03455 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D D1115_20960 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D D1115_04785 transporter K07085 K07085; putative transport protein C 99978 Cell growth D D1115_09660 septation protein A K06190 ispZ; intracellular septation protein D D1115_06350 sporulation control protein Spo0M K06377 spo0M; sporulation-control protein D D1115_01175 peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D D1115_04910 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D D1115_06160 TfoX/Sxy family DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins D D1115_05185 TfoX/Sxy family DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins D D1115_11750 SecY-interacting protein K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D D1115_07105 proQ; RNA chaperone ProQ K03607 proQ; ProP effector D D1115_21245 universal stress protein K06149 uspA; universal stress protein A D D1115_07270 uspE; universal stress protein UspE K14055 uspE; universal stress protein E D D1115_07555 universal stress protein K14055 uspE; universal stress protein E D D1115_13600 universal stress protein K14061 uspF; universal stress protein F D D1115_14640 typA; translational GTPase TypA K06207 typA; GTP-binding protein D D1115_03845 transcriptional regulator K07167 chrR; putative transcriptional regulator D D1115_11615 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D D1115_02040 PhoH family protein K07175 phoH2; PhoH-like ATPase D D1115_05005 PrkA family serine protein kinase K07180 prkA; serine protein kinase D D1115_06710 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein D D1115_09375 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein D D1115_05460 CBS domain-containing protein K07182 K07182; CBS domain-containing protein D D1115_01005 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein D D1115_13245 SH3 domain-containing protein K07184 ygiM; SH3 domain protein D D1115_03480 SMP protein K07186 smp; membrane protein D D1115_07050 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D D1115_05560 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D D1115_11470 lolB; lipoprotein localization protein LolB K02494 lolB; outer membrane lipoprotein LolB D D1115_04540 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D D1115_05945 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D D1115_05135 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D D1115_04070 molecular chaperone K06142 hlpA; outer membrane protein D D1115_02795 LysM peptidoglycan-binding domain-containing protein K06194 nlpD; lipoprotein NlpD D D1115_03390 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D D1115_01710 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D D1115_10915 Slp family lipoprotein K07285 slp; outer membrane lipoprotein D D1115_03860 hypothetical protein K07286 yajG; uncharacterized lipoprotein D D1115_10095 AsmA family protein K07289 asmA; AsmA protein D D1115_11195 NfeD family protein K07340 ybbJ; inner membrane protein D D1115_04515 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D D1115_04530 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D D1115_12295 rodZ; cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D D1115_12445 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein D D1115_01545 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D D1115_18740 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D D1115_12420 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D D1115_13525 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D D1115_00435 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D D1115_03555 short-chain dehydrogenase K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D D1115_21545 GlpM family protein K02442 glpM; membrane protein GlpM D D1115_04720 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production D D1115_07285 glucosaminidase K03796 bax; Bax protein D D1115_21575 glucosaminidase K03796 bax; Bax protein D D1115_09880 MCE family protein K06192 pqiB; paraquat-inducible protein B D D1115_13740 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D D1115_16870 phosphatase K04477 ycdX; putative hydrolase D D1115_12870 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D D1115_03145 serine protease K07001 K07001; NTE family protein D D1115_16040 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D D1115_19350 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D D1115_03275 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D D1115_19370 metal-dependent hydrolase K07038 K07038; inner membrane protein D D1115_14625 virulence factor BrkB family protein K07058 K07058; membrane protein D D1115_01060 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA D D1115_03800 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE D D1115_05660 hflD; lysogenization regulator HflD K07153 hflD; high frequency lysogenization protein D D1115_01490 SlyX protein K03745 slyX; SlyX protein D D1115_02540 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein D D1115_01675 cell division protein DamX K03112 damX; DamX protein D D1115_21900 DUF368 domain-containing protein K08974 K08974; putative membrane protein D D1115_18745 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D D1115_00475 hypothetical protein K08985 K08985; putative lipoprotein D D1115_00555 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein D D1115_05735 hypothetical protein K09858 K09858; SEC-C motif domain protein D D1115_04820 lipo-like protein K09914 K09914; putative lipoprotein D D1115_15950 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein D D1115_09860 hypothetical protein K05775 malM; maltose operon periplasmic protein D D1115_21980 transcriptional regulator K05775 malM; maltose operon periplasmic protein D D1115_14380 phosphate-starvation-inducible E K13256 psiE; protein PsiE D D1115_18690 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D D1115_18410 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D D1115_13400 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D D1115_18165 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D D1115_09305 YcjX family protein K06918 K06918; uncharacterized protein D D1115_21500 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D D1115_19440 DNA-binding protein K06934 K06934; uncharacterized protein D D1115_06005 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D D1115_04770 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D D1115_07825 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D D1115_06525 GTP-binding protein HSR1 K06946 K06946; uncharacterized protein D D1115_06530 GTP-binding protein K06946 K06946; uncharacterized protein D D1115_20450 HD domain-containing protein K06950 K06950; uncharacterized protein D D1115_11915 deacylase K06987 K06987; uncharacterized protein D D1115_19235 deacylase K06987 K06987; uncharacterized protein D D1115_04920 alpha/beta hydrolase K07000 K07000; uncharacterized protein D D1115_13190 yqiA; esterase YqiA K07000 K07000; uncharacterized protein D D1115_22475 RND family transporter K07003 K07003; uncharacterized protein D D1115_01445 hydrolase K07019 K07019; uncharacterized protein D D1115_11790 alpha/beta fold hydrolase K07020 K07020; uncharacterized protein D D1115_12240 hypothetical protein K07034 K07034; uncharacterized protein D D1115_05350 YecA family protein K07039 K07039; uncharacterized protein D D1115_10135 prepilin peptidase K07039 K07039; uncharacterized protein D D1115_01470 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein D D1115_11170 TIGR01777 family protein K07071 K07071; uncharacterized protein D D1115_06895 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D D1115_13590 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D D1115_15960 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D D1115_16395 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D D1115_12980 hypothetical protein K07090 K07090; uncharacterized protein D D1115_06900 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1115_05075 hypothetical protein K07090 K07090; uncharacterized protein D D1115_11150 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1115_13330 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1115_18295 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1115_12740 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1115_16365 PhoX family phosphatase K07093 K07093; uncharacterized protein D D1115_11160 phosphodiesterase K07095 K07095; uncharacterized protein D D1115_13665 YtfJ family protein K07109 K07109; uncharacterized protein D D1115_18995 YeeE/YedE family protein K07112 K07112; uncharacterized protein D D1115_19000 YeeE/YedE family protein K07112 K07112; uncharacterized protein D D1115_13100 YraN family protein K07121 K07121; uncharacterized protein D D1115_12130 ATP-binding protein K07133 K07133; uncharacterized protein D D1115_18305 hypothetical protein K07136 K07136; uncharacterized protein D D1115_04860 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D D1115_12925 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D D1115_20700 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D D1115_03830 ATP-dependent protease K07157 K07157; uncharacterized protein D D1115_00020 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D D1115_13300 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D D1115_02485 YggU family protein K09131 K09131; uncharacterized protein D D1115_11685 DUF493 family protein K09158 K09158; uncharacterized protein D D1115_04775 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D D1115_05010 YfbU family protein K09161 K09161; uncharacterized protein D D1115_05630 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D D1115_16580 DUF333 domain-containing protein K09712 K09712; uncharacterized protein D D1115_03975 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D D1115_09670 YciI family protein K09780 K09780; uncharacterized protein D D1115_20720 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D D1115_04740 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D D1115_04985 Trm112 family protein K09791 K09791; uncharacterized protein D D1115_21175 DUF465 domain-containing protein K09794 K09794; uncharacterized protein D D1115_12010 RnfH family protein K09801 K09801; uncharacterized protein D D1115_20350 DUF496 family protein K09802 K09802; uncharacterized protein D D1115_02600 oxidative stress defense protein K09807 K09807; uncharacterized protein D D1115_03910 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D D1115_21490 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D D1115_07070 GntR family transcriptional regulator K00243 K00243; uncharacterized protein D D1115_09885 hypothetical protein K09857 K09857; uncharacterized protein D D1115_04900 hypothetical protein K09859 K09859; uncharacterized protein D D1115_12835 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D D1115_03005 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D D1115_00830 DUF416 family protein K09891 K09891; uncharacterized protein D D1115_14685 yihI; Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein D D1115_02630 YecA family protein K09895 K09895; uncharacterized protein D D1115_15145 DUF1040 family protein K09896 K09896; uncharacterized protein D D1115_15680 DUF413 domain-containing protein K09897 K09897; uncharacterized protein D D1115_01440 YheU family protein K09898 K09898; uncharacterized protein D D1115_10170 DUF412 domain-containing protein K09899 K09899; uncharacterized protein D D1115_09600 DUF440 family protein K09901 K09901; uncharacterized protein D D1115_10415 DUF1414 domain-containing protein K09904 K09904; uncharacterized protein D D1115_10940 VOC family protein K09907 K09907; uncharacterized protein D D1115_13165 DUF1043 family protein K09908 K09908; uncharacterized protein D D1115_05090 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D D1115_21675 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D D1115_03170 UPF0231 family protein K09910 K09910; uncharacterized protein D D1115_07180 matP; macrodomain Ter protein MatP K09911 K09911; uncharacterized protein D D1115_21250 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D D1115_20340 DUF480 domain-containing protein K09915 K09915; uncharacterized protein D D1115_10490 DUF1315 family protein K09916 K09916; uncharacterized protein D D1115_18865 YoaH family protein K09917 K09917; uncharacterized protein D D1115_03595 multidrug DMT transporter permease K09918 K09918; uncharacterized protein D D1115_13200 DUF1249 family protein K09920 K09920; uncharacterized protein D D1115_00455 DUF484 family protein K09921 K09921; uncharacterized protein D D1115_16360 DUF469 family protein K09923 K09923; uncharacterized protein D D1115_07245 hypothetical protein K09926 K09926; uncharacterized protein D D1115_04965 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D D1115_00270 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D D1115_01360 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D D1115_04205 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D D1115_07950 DUF1415 family protein K09941 K09941; uncharacterized protein D D1115_19985 DUF2076 domain-containing protein K09945 K09945; uncharacterized protein D D1115_13690 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein D D1115_19020 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein D D1115_20000 hypothetical protein K09954 K09954; uncharacterized protein D D1115_13335 hypothetical protein K09955 K09955; uncharacterized protein D D1115_11040 DUF1853 family protein K09977 K09977; uncharacterized protein D D1115_13235 TIGR00153 family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024