+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Vibrio alginolyticus

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E N646_1665 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D N646_0183 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D N646_1987 bacterial nucleoid DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D N646_3070 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D N646_0331 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha D N646_1104 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D N646_2189 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D N646_2603 putative phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D N646_4596 DPS family protein K04047 dps; starvation-inducible DNA-binding protein D N646_1971 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D N646_1906 RNA-binding protein Hfq K03666 hfq; host factor-I protein D N646_1685 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D N646_0157 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N646_3429 transcriptional regulator, AsnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N646_3880 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N646_3899 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N646_3530 transcriptional regulator, AsnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N646_1247 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D N646_0101 cell division protein MukB K03632 mukB; chromosome partition protein MukB D N646_0100 condesin subunit E K03804 mukE; chromosome partition protein MukE D N646_0099 condesin subunit F K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D N646_2618 cell division protein FtsA K03590 ftsA; cell division protein FtsA D N646_1654 cell division protein FtsB K05589 ftsB; cell division protein FtsB D N646_2051 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D N646_2609 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D N646_0158 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D N646_2608 cell division protein FtsL K03586 ftsL; cell division protein FtsL D N646_2617 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D N646_2614 cell division protein FtsW K03588 ftsW; cell division protein FtsW D N646_2050 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D N646_2619 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D N646_2944 cell division protein ZipA K03528 zipA; cell division protein ZipA D N646_1680 hypothetical protein K09888 zapA; cell division protein ZapA D N646_2438 hypothetical protein K09892 zapB; cell division protein ZapB D N646_0626 hypothetical protein K18657 zapC; cell division protein ZapC D N646_1621 hypothetical protein K18778 zapD; cell division protein ZapD D N646_2594 hypothetical protein K06916 zapE; cell division protein ZapE D N646_2477 hypothetical protein K07269 ytfB; cell division protein YtfB D N646_1910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D N646_0140 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system D N646_2222 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D N646_0014 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D N646_3027 septum formation inhibitor K03610 minC; septum site-determining protein MinC D N646_3026 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D N646_3025 Cell division topological specificity factor K03608 minE; cell division topological specificity factor D N646_0301 hypothetical protein K13053 sulA; cell division inhibitor SulA D N646_2370 nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D N646_2990 SeqA protein K03645 seqA; negative modulator of initiation of replication D N646_1782 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D N646_1781 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D N646_1780 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D N646_2875 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D N646_3475 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D N646_1331 Soj-like protein K03496 parA; chromosome partitioning protein D N646_2178 CobQ/CobB/MinD/ParA nucleotide binding domain, putative K03496 parA; chromosome partitioning protein D N646_3464 ParA family protein K03496 parA; chromosome partitioning protein D N646_2177 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D N646_3463 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D N646_2590 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D N646_2589 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D N646_2180 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D N646_2179 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D N646_2077 tyrosine recombinase K03733 xerC; integrase/recombinase XerC D N646_2662 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D N646_1144 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D N646_2297 GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024