+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Volvox carteri f. nagariensis

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E VOLCADRAFT_90770 hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E VOLCADRAFT_31465 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E VOLCADRAFT_65162 cdkd1; hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E VOLCADRAFT_62343 ssa18; hypothetical protein K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] D Cap binding complex E VOLCADRAFT_88418 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1 E VOLCADRAFT_79141 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E VOLCADRAFT_59795 hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 D Pre-mRNA cleavage factor IIm (CFIIm) E VOLCADRAFT_67961 hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] D Cleavage and polyadenylation specificity factor (CPSF) complex E VOLCADRAFT_87503 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E VOLCADRAFT_31342 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E VOLCADRAFT_79885 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E VOLCADRAFT_103576 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E VOLCADRAFT_121772 hypothetical protein K15542 PFS2; polyadenylation factor subunit 2 E VOLCADRAFT_65424 hypothetical protein K14962 WDR82; COMPASS component SWD2 E VOLCADRAFT_106144 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E VOLCADRAFT_61755 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E VOLCADRAFT_116706 hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3 E VOLCADRAFT_104818 hypothetical protein K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E VOLCADRAFT_107252 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' E VOLCADRAFT_79410 smp1; small nuclear ribonucleoprotein K11088 SNRPD3; small nuclear ribonucleoprotein D3 E VOLCADRAFT_82766 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E E VOLCADRAFT_64746 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E E VOLCADRAFT_109863 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F E VOLCADRAFT_87780 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G E VOLCADRAFT_99939 hypothetical protein K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E VOLCADRAFT_31342 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E VOLCADRAFT_79885 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E VOLCADRAFT_104818 hypothetical protein K06100 SYMPK; symplekin D DRB sensitivity inducing factor (DSIF) complex E VOLCADRAFT_107303 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E VOLCADRAFT_106802 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E VOLCADRAFT_59216 hypothetical protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E VOLCADRAFT_116042 hypothetical protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E VOLCADRAFT_105213 hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP E VOLCADRAFT_86411 hypothetical protein K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 D Poly(A) addition factors E VOLCADRAFT_64932 hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing C Other processing factors D VOLCADRAFT_120901 spl4; splicing factor-like protein K13102 KIN; DNA/RNA-binding protein KIN17 D VOLCADRAFT_104258 ard1; zinc finger related protein K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E VOLCADRAFT_75761 hypothetical protein K12876 RBM8A; RNA-binding protein 8A E VOLCADRAFT_76455 mgo; mago nashi-like protein K12877 MAGOH; protein mago nashi E VOLCADRAFT_90392 hypothetical protein K12881 THOC4; THO complex subunit 4 E VOLCADRAFT_80795 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E VOLCADRAFT_78152 eukaryotic initiation factor K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E VOLCADRAFT_47490 hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18 E VOLCADRAFT_98786 hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E VOLCADRAFT_121090 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E VOLCADRAFT_103265 hypothetical protein K12879 THOC2; THO complex subunit 2 E VOLCADRAFT_74197 hypothetical protein K12880 THOC3; THO complex subunit 3 E VOLCADRAFT_90392 hypothetical protein K12881 THOC4; THO complex subunit 4 E VOLCADRAFT_120782 hypothetical protein K13174 THOC5; THO complex subunit 5 E VOLCADRAFT_103142 hypothetical protein K13176 THOC7; THO complex subunit 7 D TREX-2 complex E VOLCADRAFT_121565 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E VOLCADRAFT_68978 hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E VOLCADRAFT_78083 hypothetical protein K16466 CETN3; centrin-3 D Nuclear pore complex E VOLCADRAFT_78734 mRNA export protein-like protein K14298 RAE1; mRNA export factor E VOLCADRAFT_80440 hypothetical protein K14004 SEC13; protein transport protein SEC13 E VOLCADRAFT_95258 hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85 E VOLCADRAFT_105669 hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E VOLCADRAFT_88974 hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E VOLCADRAFT_120776 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 E VOLCADRAFT_94425 hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E VOLCADRAFT_96758 hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107 E VOLCADRAFT_118991 hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155 E VOLCADRAFT_117126 hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205 E VOLCADRAFT_105503 hypothetical protein K14307 NUPL1; nucleoporin p58/p45 E VOLCADRAFT_121485 hypothetical protein K14315 NDC1; nucleoporin NDC1 E VOLCADRAFT_78083 hypothetical protein K16466 CETN3; centrin-3 D Ran-mediated transport factors E VOLCADRAFT_110055 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran E VOLCADRAFT_92020 hypothetical protein K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B E VOLCADRAFT_99643 hypothetical protein K18726 FAF2; FAS-associated factor 2 E VOLCADRAFT_78972 cdc48; hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase E VOLCADRAFT_98497 hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E VOLCADRAFT_44510 hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E VOLCADRAFT_94143 hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E VOLCADRAFT_82881 hypothetical protein K14290 XPO1; exportin-1 E VOLCADRAFT_65225 mot59; hypothetical protein K18460 XPO7; exportin-7 E VOLCADRAFT_107530 hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1 E VOLCADRAFT_120471 hypothetical protein K14651 TAF15; transcription initiation factor TFIID subunit 15 D eIF4F and regulatory proteins E VOLCADRAFT_108106 eif4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E E VOLCADRAFT_120953 hypothetical protein K03257 EIF4A; translation initiation factor 4A E VOLCADRAFT_106205 hypothetical protein K03257 EIF4A; translation initiation factor 4A E VOLCADRAFT_103732 eif44; eukaryotic translation initiation factor 4 K03260 EIF4G; translation initiation factor 4G E VOLCADRAFT_80411 hypothetical protein K03260 EIF4G; translation initiation factor 4G E VOLCADRAFT_70034 DEAD/DEAH box helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E VOLCADRAFT_82651 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E VOLCADRAFT_82578 hypothetical protein K13126 PABPC; polyadenylate-binding protein E VOLCADRAFT_107417 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E VOLCADRAFT_76912 hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence D APOBEC1-ACF complex D Other transport factors E VOLCADRAFT_104291 hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E VOLCADRAFT_121254 hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E VOLCADRAFT_107445 hypothetical protein K14411 MSI; RNA-binding protein Musashi E VOLCADRAFT_43575 hypothetical protein K14411 MSI; RNA-binding protein Musashi E VOLCADRAFT_68560 efg4; elongation factor-like protein K14416 HBS1; elongation factor 1 alpha-like protein E VOLCADRAFT_106910 dom34; meiotic cell division protein pelota K06965 PELO; protein pelota E VOLCADRAFT_72471 hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2 E VOLCADRAFT_103235 hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E VOLCADRAFT_103670 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1 E VOLCADRAFT_103091 hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein E VOLCADRAFT_57885 hypothetical protein K11493 RCC1; regulator of chromosome condensation E VOLCADRAFT_106118 hypothetical protein K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E VOLCADRAFT_109683 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1 E VOLCADRAFT_78065 efg3; elongation factor-like protein K03267 ERF3; peptide chain release factor subunit 3 E VOLCADRAFT_86581 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] D Protein phosphatase 2A E VOLCADRAFT_84678 protein phosphatase 2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E VOLCADRAFT_80191 hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E VOLCADRAFT_83018 hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E VOLCADRAFT_73784 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E VOLCADRAFT_88941 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E VOLCADRAFT_42247 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E VOLCADRAFT_107119 hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E VOLCADRAFT_116833 hypothetical protein K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E VOLCADRAFT_84539 efg6; elongation factor Tu-like protein K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E VOLCADRAFT_121154 puf1; pumilio family protein K14844 PUF6; pumilio homology domain family member 6 E VOLCADRAFT_57247 myoB; type XI myosin heavy chain MyoB K10357 MYO5; myosin V E VOLCADRAFT_82838 myoA; type XI myosin heavy chain MyoA K10357 MYO5; myosin V E VOLCADRAFT_107085 myoC; type VIII myosin heavy chain MyoC K10357 MYO5; myosin V E VOLCADRAFT_90485 exn1; 3'-5' exonuclease K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals D Trans-acting binding proteins E VOLCADRAFT_107877 crb1; subunit of circadian RNA-binding protein K13210 FUBP; far upstream element-binding protein E VOLCADRAFT_104736 hypothetical protein K13210 FUBP; far upstream element-binding protein E VOLCADRAFT_102756 eif1A1; eukaryotic translation initiation factor 1 alpha 1 K03231 EEF1A; elongation factor 1-alpha E VOLCADRAFT_103661 eef1; eukaryotic translation elongation factor 1 alpha 2 K03231 EEF1A; elongation factor 1-alpha D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule E VOLCADRAFT_92637 AGO2; Argonaute-like protein K11593 ELF2C; eukaryotic translation initiation factor 2C E VOLCADRAFT_105714 AGO3; Argonaute-like protein K11593 ELF2C; eukaryotic translation initiation factor 2C E VOLCADRAFT_108106 eif4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E E VOLCADRAFT_86581 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E VOLCADRAFT_70034 DEAD/DEAH box helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E VOLCADRAFT_82651 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E VOLCADRAFT_81392 deh1; DEAD-box RNA helicase, ATP-dependent, cytoplasmic K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E VOLCADRAFT_105742 hypothetical protein K18749 LSM14; protein LSM14 E VOLCADRAFT_107966 hypothetical protein K18752 TNPO1; transportin-1 E VOLCADRAFT_56182 CCCH-type zinc finger protein K18753 ZFP36L; butyrate response factor E VOLCADRAFT_104291 hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E VOLCADRAFT_121254 hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E VOLCADRAFT_81085 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E VOLCADRAFT_45332 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E VOLCADRAFT_30435 hypothetical protein K18757 LARP1; la-related protein 1 D P-body specific factors E VOLCADRAFT_90679 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E VOLCADRAFT_109782 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E VOLCADRAFT_108433 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E VOLCADRAFT_79613 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E VOLCADRAFT_109070 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E VOLCADRAFT_60073 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E VOLCADRAFT_109137 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E VOLCADRAFT_90948 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E VOLCADRAFT_57247 myoB; type XI myosin heavy chain MyoB K10357 MYO5; myosin V E VOLCADRAFT_82838 myoA; type XI myosin heavy chain MyoA K10357 MYO5; myosin V E VOLCADRAFT_107085 myoC; type VIII myosin heavy chain MyoC K10357 MYO5; myosin V E VOLCADRAFT_108723 tubA1b; alpha tubulin K07374 TUBA; tubulin alpha E VOLCADRAFT_77526 tubA1; alpha tubulin K07374 TUBA; tubulin alpha E VOLCADRAFT_109786 tubA2; alpha tubulin K07374 TUBA; tubulin alpha E VOLCADRAFT_108387 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E VOLCADRAFT_127435 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E VOLCADRAFT_92540 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E VOLCADRAFT_106614 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_88142 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_97721 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_80930 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E VOLCADRAFT_107778 hypothetical protein K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E VOLCADRAFT_87610 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E VOLCADRAFT_74564 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D Stress granule specific factors E VOLCADRAFT_82578 hypothetical protein K13126 PABPC; polyadenylate-binding protein E VOLCADRAFT_102958 hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E VOLCADRAFT_105762 eif2A; eukaryotic translation initiation factor K15026 EIF2A; translation initiation factor 2A E VOLCADRAFT_77922 eif3B; eukaryotic translation initiation factor 3b K03253 EIF3B; translation initiation factor 3 subunit B E VOLCADRAFT_120953 hypothetical protein K03257 EIF4A; translation initiation factor 4A E VOLCADRAFT_106205 hypothetical protein K03257 EIF4A; translation initiation factor 4A E VOLCADRAFT_78152 eukaryotic initiation factor K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E VOLCADRAFT_103732 eif44; eukaryotic translation initiation factor 4 K03260 EIF4G; translation initiation factor 4G E VOLCADRAFT_80411 hypothetical protein K03260 EIF4G; translation initiation factor 4G E VOLCADRAFT_78914 hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein B mRNA degradation factors C 5'-3' decay D Decapping complex E VOLCADRAFT_90679 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E VOLCADRAFT_81392 deh1; DEAD-box RNA helicase, ATP-dependent, cytoplasmic K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] D Lsm complex E VOLCADRAFT_109782 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E VOLCADRAFT_108433 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E VOLCADRAFT_79613 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E VOLCADRAFT_109070 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E VOLCADRAFT_60073 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E VOLCADRAFT_109137 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E VOLCADRAFT_90948 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases D Other 5'-3' decay factors E VOLCADRAFT_109749 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E VOLCADRAFT_76178 hypothetical protein K07573 CSL4; exosome complex component CSL4 E VOLCADRAFT_73556 hypothetical protein K03679 RRP4; exosome complex component RRP4 E VOLCADRAFT_61387 hypothetical protein K03681 RRP40; exosome complex component RRP40 E VOLCADRAFT_108889 hypothetical protein K11600 RRP41; exosome complex component RRP41 E VOLCADRAFT_105481 hypothetical protein K12590 RRP46; exosome complex component RRP46 E VOLCADRAFT_89262 hypothetical protein K12587 MTR3; exosome complex component MTR3 E VOLCADRAFT_90878 hypothetical protein K12589 RRP42; exosome complex component RRP42 E VOLCADRAFT_86657 hypothetical protein K12586 RRP43; exosome complex component RRP43 E VOLCADRAFT_108396 hypothetical protein K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E VOLCADRAFT_55673 hypothetical protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E VOLCADRAFT_88450 hypothetical protein K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] E VOLCADRAFT_99155 hypothetical protein K12592 C1D; exosome complex protein LRP1 E VOLCADRAFT_58784 hypothetical protein K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] D TRAMP complex E VOLCADRAFT_104084 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E VOLCADRAFT_87356 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E VOLCADRAFT_121704 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] E VOLCADRAFT_107315 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E VOLCADRAFT_107417 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E VOLCADRAFT_62857 hypothetical protein K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E VOLCADRAFT_106614 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_88142 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_97721 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E VOLCADRAFT_108387 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E VOLCADRAFT_127435 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E VOLCADRAFT_92540 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E VOLCADRAFT_80930 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E VOLCADRAFT_109328 hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9 E VOLCADRAFT_83674 hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16 E VOLCADRAFT_80390 hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16 D Pan complex E VOLCADRAFT_87610 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] D Other 3'-5' decay factors E VOLCADRAFT_120753 hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E VOLCADRAFT_108501 hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E VOLCADRAFT_98156 hypothetical protein K18764 NOCT; nocturnin [EC:3.1.3.108] E VOLCADRAFT_44726 hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] E VOLCADRAFT_109749 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E VOLCADRAFT_88222 hypothetical protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E VOLCADRAFT_66302 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E VOLCADRAFT_79991 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E VOLCADRAFT_107702 hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E VOLCADRAFT_74177 pfk2; phosphofructokinase family protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E VOLCADRAFT_68936 pfk3; phosphofructokinase family protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E VOLCADRAFT_78805 pfk1; phosphofructokinase family protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E VOLCADRAFT_57436 hsp70C; heat shock protein Hsp70C K04043 dnaK; molecular chaperone DnaK E VOLCADRAFT_79395 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E VOLCADRAFT_81582 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E VOLCADRAFT_73556 hypothetical protein K03679 RRP4; exosome complex component RRP4 E VOLCADRAFT_76178 hypothetical protein K07573 CSL4; exosome complex component CSL4 D Cofactors E VOLCADRAFT_108889 hypothetical protein K11600 RRP41; exosome complex component RRP41 E VOLCADRAFT_90878 hypothetical protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024