+D GENES KO
#
KEGG Orthology (KO) - Venatoribacter cucullus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vcw00010]
D GJQ55_01895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJQ55_11480 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJQ55_03260 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJQ55_08295 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJQ55_11485 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJQ55_02050 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJQ55_06530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJQ55_02975 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJQ55_02980 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GJQ55_01420 alcohol dehydrogenase catalytic domain-containing protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04255 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D GJQ55_12845 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:vcw00020]
D GJQ55_05910 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GJQ55_07390 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GJQ55_07370 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_07395 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_06330 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJQ55_05935 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GJQ55_05940 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_05955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GJQ55_05950 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GJQ55_05925 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJQ55_05930 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJQ55_05915 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJQ55_05920 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJQ55_02585 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJQ55_10550 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJQ55_00210 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJQ55_11715 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D GJQ55_11710 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D GJQ55_12845 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GJQ55_02975 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJQ55_02980 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vcw00030]
D GJQ55_01895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJQ55_08430 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJQ55_08425 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D GJQ55_02710 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GJQ55_11605 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GJQ55_06300 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GJQ55_00670 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_03340 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJQ55_03410 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJQ55_08420 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D GJQ55_08415 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GJQ55_11480 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:vcw00040]
D GJQ55_04095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_04150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_04090 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJQ55_02710 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:vcw00051]
D GJQ55_03015 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GJQ55_11515 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_12130 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_04015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_12135 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04050 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJQ55_11480 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJQ55_03260 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJQ55_04055 NAD-dependent epimerase/dehydratase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
C 00052 Galactose metabolism [PATH:vcw00052]
D GJQ55_04090 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
D GJQ55_04095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_04150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:vcw00500]
D GJQ55_04090 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_01895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJQ55_03015 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vcw00520]
D GJQ55_08315 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GJQ55_03015 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GJQ55_00320 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJQ55_03255 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GJQ55_00380 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GJQ55_11980 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D GJQ55_09105 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D GJQ55_10750 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D GJQ55_10745 NTP transferase domain-containing protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D GJQ55_11125 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJQ55_06145 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04090 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJQ55_04095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_04150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_01895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJQ55_12135 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GJQ55_11515 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_12130 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_04015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_04050 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GJQ55_04055 NAD-dependent epimerase/dehydratase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D GJQ55_11570 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D GJQ55_13025 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:vcw00620]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_02975 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJQ55_02980 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GJQ55_01420 alcohol dehydrogenase catalytic domain-containing protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D GJQ55_04900 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJQ55_07190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04895 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_03125 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D GJQ55_03870 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GJQ55_11785 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GJQ55_07415 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GJQ55_00415 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D GJQ55_10560 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D GJQ55_10555 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D GJQ55_10565 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D GJQ55_11715 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D GJQ55_11710 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D GJQ55_10550 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJQ55_00210 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJQ55_02585 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJQ55_10035 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJQ55_12845 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GJQ55_06530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJQ55_06055 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_09930 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GJQ55_11340 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vcw00630]
D GJQ55_09200 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_06055 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D GJQ55_05910 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GJQ55_07390 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GJQ55_07370 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_07395 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_06885 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GJQ55_02715 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GJQ55_06595 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_01690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_10530 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GJQ55_03845 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D GJQ55_08415 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GJQ55_02610 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vcw00640]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_05960 AMP-binding protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D GJQ55_04900 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJQ55_07190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04895 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_00955 acryloyl-CoA reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_05950 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GJQ55_05955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GJQ55_06555 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GJQ55_06560 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D GJQ55_06570 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D GJQ55_07370 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_07395 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_06550 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:vcw00650]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_06885 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GJQ55_04310 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D GJQ55_00705 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D GJQ55_10555 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D GJQ55_05925 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJQ55_05930 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJQ55_05915 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJQ55_05920 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJQ55_00945 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJQ55_02505 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_03120 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_02510 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:vcw00660]
D GJQ55_02505 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_03120 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_02510 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJQ55_05950 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GJQ55_05955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GJQ55_07175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GJQ55_07170 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GJQ55_07165 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vcw00562]
D GJQ55_01475 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJQ55_03620 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJQ55_04695 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D GJQ55_03260 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vcw00190]
D GJQ55_10985 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GJQ55_05925 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJQ55_05930 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJQ55_05915 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJQ55_05920 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJQ55_11290 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GJQ55_11285 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJQ55_11280 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GJQ55_07585 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GJQ55_07590 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D GJQ55_07595 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D GJQ55_07600 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D GJQ55_01265 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GJQ55_01270 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GJQ55_01275 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D GJQ55_13120 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GJQ55_13110 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GJQ55_13115 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GJQ55_13125 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GJQ55_13105 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GJQ55_13140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJQ55_13130 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GJQ55_13135 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GJQ55_02765 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D GJQ55_00650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJQ55_07740 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:vcw00710]
D GJQ55_11485 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJQ55_08295 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJQ55_11480 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJQ55_11605 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GJQ55_00670 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GJQ55_03260 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJQ55_02710 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GJQ55_06300 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GJQ55_10035 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJQ55_12845 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GJQ55_00415 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Other carbon fixation pathways [PATH:vcw00720]
D GJQ55_06530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJQ55_10035 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJQ55_11715 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D GJQ55_11710 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D GJQ55_02585 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJQ55_05925 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJQ55_05930 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJQ55_05915 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJQ55_05920 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJQ55_05955 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GJQ55_05950 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_06330 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJQ55_07390 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GJQ55_07370 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_07395 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJQ55_06170 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GJQ55_12120 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GJQ55_07190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04895 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04900 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:vcw00680]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GJQ55_08760 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D GJQ55_01690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJQ55_10035 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJQ55_11480 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJQ55_04900 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJQ55_07190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04895 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_06530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJQ55_02050 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GJQ55_11890 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GJQ55_04950 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJQ55_01755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D GJQ55_06485 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:vcw00910]
D GJQ55_05145 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJQ55_05155 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJQ55_05795 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D GJQ55_05790 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D GJQ55_05785 ATP-binding cassette domain-containing protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D GJQ55_05115 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05120 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05130 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05750 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D GJQ55_05765 NAD(P)/FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D GJQ55_05755 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D GJQ55_05760 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D GJQ55_05090 nitrite reductase K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D GJQ55_05070 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D GJQ55_05075 c-type cytochrome K02305 norC; nitric oxide reductase subunit C
D GJQ55_00910 nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D GJQ55_08685 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D GJQ55_12435 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_11835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GJQ55_11830 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GJQ55_11705 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vcw00920]
D GJQ55_08200 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJQ55_08195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJQ55_06480 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GJQ55_07555 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GJQ55_06845 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GJQ55_13000 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GJQ55_03450 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GJQ55_05515 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GJQ55_10785 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D GJQ55_03630 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GJQ55_00710 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GJQ55_07110 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D GJQ55_10880 long-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D GJQ55_00700 AMP-binding protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D GJQ55_02665 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D GJQ55_07775 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D GJQ55_02660 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vcw00061]
D GJQ55_06630 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GJQ55_06620 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJQ55_07495 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D GJQ55_05875 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GJQ55_06635 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJQ55_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03360 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_06625 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03225 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D GJQ55_09230 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJQ55_06225 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJQ55_01460 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GJQ55_06875 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_07785 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vcw00071]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_12410 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GJQ55_05355 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GJQ55_03370 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D GJQ55_06875 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_07785 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_08745 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D GJQ55_00595 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vcw00561]
D GJQ55_09370 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GJQ55_03605 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GJQ55_06615 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GJQ55_00030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJQ55_00680 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJQ55_01465 alpha/beta fold hydrolase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:vcw00564]
D GJQ55_07250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GJQ55_05885 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D GJQ55_03605 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GJQ55_00030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJQ55_00680 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJQ55_04810 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D GJQ55_12070 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GJQ55_06840 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GJQ55_09260 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GJQ55_11425 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GJQ55_01770 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GJQ55_06450 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GJQ55_11805 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D GJQ55_07760 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GJQ55_03135 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:vcw00565]
D GJQ55_04810 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:vcw00600]
D GJQ55_02530 alkaline ceramidase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
D GJQ55_04810 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism [PATH:vcw00591]
D GJQ55_04810 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D GJQ55_07790 acyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:vcw00592]
D GJQ55_04810 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vcw01040]
D GJQ55_02910 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GJQ55_08260 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GJQ55_09190 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D GJQ55_09195 2Fe-2S iron-sulfur cluster binding domain-containing protein K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D GJQ55_01480 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D GJQ55_05440 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D GJQ55_00485 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vcw00230]
D GJQ55_12445 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GJQ55_12825 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_03340 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJQ55_03410 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJQ55_07115 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GJQ55_10715 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GJQ55_04985 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GJQ55_07830 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D GJQ55_09895 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D GJQ55_04990 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GJQ55_05335 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GJQ55_05340 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GJQ55_08460 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GJQ55_06040 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GJQ55_10710 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJQ55_04675 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GJQ55_11035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJQ55_12830 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D GJQ55_09960 DUF1255 family protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D GJQ55_02495 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GJQ55_07910 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GJQ55_05485 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GJQ55_03645 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJQ55_00725 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GJQ55_05490 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GJQ55_12710 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GJQ55_09390 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJQ55_09395 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GJQ55_05170 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GJQ55_08965 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GJQ55_12720 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GJQ55_00635 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GJQ55_10045 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D GJQ55_05985 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D GJQ55_12490 hypothetical protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D GJQ55_01870 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GJQ55_02590 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D GJQ55_10030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GJQ55_10040 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GJQ55_12060 serine/threonine protein phosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D GJQ55_12455 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D GJQ55_10780 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D GJQ55_08200 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJQ55_08195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:vcw00240]
D GJQ55_03210 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJQ55_03205 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJQ55_12225 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GJQ55_12230 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GJQ55_04775 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GJQ55_08675 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D GJQ55_12690 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GJQ55_04005 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GJQ55_09275 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GJQ55_03645 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJQ55_10040 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GJQ55_11230 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GJQ55_04790 DUF45 domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D GJQ55_11065 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GJQ55_04970 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GJQ55_11035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJQ55_09960 DUF1255 family protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D GJQ55_10000 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GJQ55_12220 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GJQ55_02590 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D GJQ55_05170 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GJQ55_04265 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D GJQ55_09390 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJQ55_09395 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GJQ55_06650 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GJQ55_12665 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GJQ55_03335 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D GJQ55_12295 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vcw00250]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_10125 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GJQ55_11505 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GJQ55_07335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJQ55_05830 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GJQ55_04785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJQ55_13070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJQ55_01870 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GJQ55_06040 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GJQ55_12225 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GJQ55_00945 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJQ55_11835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GJQ55_11830 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GJQ55_08685 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D GJQ55_12435 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_03210 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJQ55_03205 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJQ55_00320 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJQ55_07115 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vcw00260]
D GJQ55_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_00750 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_07160 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJQ55_04245 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJQ55_12780 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D GJQ55_06485 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D GJQ55_03805 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GJQ55_01690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJQ55_02050 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GJQ55_11890 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GJQ55_04950 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJQ55_01755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_10530 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GJQ55_11425 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GJQ55_01560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D GJQ55_00675 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GJQ55_07135 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GJQ55_07140 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJQ55_07460 TrpB-like pyridoxal phosphate-dependent enzyme K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJQ55_00760 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D GJQ55_00765 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D GJQ55_00755 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vcw00270]
D GJQ55_03630 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GJQ55_01560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D GJQ55_06830 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GJQ55_11585 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJQ55_07800 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJQ55_12105 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GJQ55_02735 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GJQ55_12485 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJQ55_02495 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GJQ55_09095 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D GJQ55_08310 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D GJQ55_01890 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D GJQ55_01885 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D GJQ55_01875 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D GJQ55_01880 cupin domain-containing protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D GJQ55_12115 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GJQ55_08890 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D GJQ55_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_00750 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_07160 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJQ55_04245 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJQ55_00710 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GJQ55_01330 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GJQ55_07110 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D GJQ55_12050 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJQ55_12925 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GJQ55_12200 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_10055 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D GJQ55_11890 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GJQ55_04950 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vcw00280]
D GJQ55_12050 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_12410 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GJQ55_05355 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vcw00290]
D GJQ55_00675 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GJQ55_07175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GJQ55_07170 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GJQ55_07165 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GJQ55_02505 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_03120 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_02510 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJQ55_11435 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GJQ55_11395 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GJQ55_12050 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJQ55_07335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJQ55_09930 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GJQ55_11340 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vcw00300]
D GJQ55_04245 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJQ55_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_00750 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_07160 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJQ55_08475 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GJQ55_03195 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GJQ55_03890 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D GJQ55_09355 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GJQ55_11445 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D GJQ55_07915 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GJQ55_12505 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GJQ55_12500 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GJQ55_10465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJQ55_10460 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vcw00310]
D GJQ55_05940 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00945 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:vcw00220]
D GJQ55_09360 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GJQ55_04785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJQ55_13070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_03210 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJQ55_03205 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJQ55_08685 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D GJQ55_12435 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_07335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJQ55_12270 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D GJQ55_10395 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GJQ55_12675 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GJQ55_12000 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GJQ55_09355 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GJQ55_12265 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vcw00330]
D GJQ55_10300 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GJQ55_12485 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJQ55_02735 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GJQ55_00855 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GJQ55_02390 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GJQ55_02280 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:vcw00340]
D GJQ55_11120 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GJQ55_01865 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D GJQ55_00800 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D GJQ55_00805 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GJQ55_11900 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GJQ55_11905 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GJQ55_11895 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GJQ55_11910 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_11115 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:vcw00350]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GJQ55_00945 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vcw00360]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04560 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D GJQ55_08075 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vcw00380]
D GJQ55_05940 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_04560 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D GJQ55_08075 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vcw00400]
D GJQ55_10585 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJQ55_07275 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJQ55_11845 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GJQ55_10685 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D GJQ55_00130 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D GJQ55_11850 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GJQ55_04965 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D GJQ55_04290 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GJQ55_02685 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJQ55_02690 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GJQ55_02695 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GJQ55_07145 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GJQ55_02700 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GJQ55_07135 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GJQ55_07140 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJQ55_07460 TrpB-like pyridoxal phosphate-dependent enzyme K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJQ55_04955 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vcw00410]
D GJQ55_01900 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GJQ55_01905 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vcw00430]
D GJQ55_12625 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJQ55_05830 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GJQ55_08685 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D GJQ55_07190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04895 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJQ55_04900 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:vcw00450]
D GJQ55_06830 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GJQ55_11585 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJQ55_07800 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJQ55_01560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D GJQ55_04635 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D GJQ55_09785 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GJQ55_08200 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJQ55_08195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJQ55_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vcw00460]
D GJQ55_12625 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJQ55_11505 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GJQ55_01690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vcw00470]
D GJQ55_11635 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJQ55_10430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJQ55_07750 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GJQ55_10450 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJQ55_12505 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GJQ55_12500 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:vcw00480]
D GJQ55_12625 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJQ55_02845 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D GJQ55_12925 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GJQ55_12200 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GJQ55_11700 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJQ55_08235 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJQ55_08860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GJQ55_04715 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJQ55_06760 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D GJQ55_06330 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJQ55_08430 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJQ55_04690 redoxin domain-containing protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GJQ55_07325 redoxin family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GJQ55_08085 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GJQ55_10300 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GJQ55_12485 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:vcw00540]
D GJQ55_09225 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GJQ55_10410 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GJQ55_09235 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GJQ55_06150 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GJQ55_09220 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GJQ55_06130 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GJQ55_11160 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GJQ55_02395 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GJQ55_06020 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GJQ55_06025 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GJQ55_12235 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GJQ55_12245 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJQ55_00065 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJQ55_00735 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D GJQ55_03455 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GJQ55_12240 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GJQ55_00035 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GJQ55_12155 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vcw00541]
D GJQ55_04090 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJQ55_04095 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_04150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GJQ55_03885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJQ55_03875 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJQ55_02815 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GJQ55_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GJQ55_11570 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D GJQ55_13025 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D GJQ55_11515 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_12130 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_04015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GJQ55_12135 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GJQ55_04050 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GJQ55_04055 NAD-dependent epimerase/dehydratase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D GJQ55_00380 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GJQ55_04760 NAD-dependent epimerase/dehydratase family protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D GJQ55_04165 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:vcw00550]
D GJQ55_11125 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJQ55_06145 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJQ55_10435 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GJQ55_10450 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJQ55_10465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJQ55_10430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJQ55_10460 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GJQ55_09265 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GJQ55_10015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_02160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_10455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJQ55_10440 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GJQ55_11880 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJQ55_12035 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GJQ55_02260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJQ55_10470 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJQ55_02325 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:vcw00552]
D GJQ55_10015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_02160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_04760 NAD-dependent epimerase/dehydratase family protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vcw00543]
D GJQ55_03630 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vcw00730]
D GJQ55_08380 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D GJQ55_08360 hypothetical protein K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D GJQ55_03640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJQ55_06715 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GJQ55_08375 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D GJQ55_01375 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GJQ55_08365 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D GJQ55_01650 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D GJQ55_01795 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GJQ55_10030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vcw00740]
D GJQ55_01390 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJQ55_01665 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GJQ55_01675 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GJQ55_12515 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D GJQ55_10215 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GJQ55_01660 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GJQ55_08640 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GJQ55_01670 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GJQ55_02410 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GJQ55_12445 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GJQ55_02790 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vcw00750]
D GJQ55_08215 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D GJQ55_11490 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D GJQ55_07360 pdxB; 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D GJQ55_04950 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJQ55_10765 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D GJQ55_10070 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D GJQ55_03805 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vcw00760]
D GJQ55_10125 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GJQ55_08495 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GJQ55_10625 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GJQ55_11035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJQ55_02275 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GJQ55_10040 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GJQ55_02480 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GJQ55_11000 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D GJQ55_08885 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GJQ55_06285 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D GJQ55_00215 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GJQ55_00220 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GJQ55_00225 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D GJQ55_00945 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vcw00770]
D GJQ55_02505 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_03120 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJQ55_02510 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJQ55_11435 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GJQ55_11395 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GJQ55_01910 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GJQ55_03000 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D GJQ55_01905 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GJQ55_00990 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GJQ55_12660 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GJQ55_10040 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GJQ55_12615 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GJQ55_10655 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GJQ55_10065 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GJQ55_12050 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJQ55_01900 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:vcw00780]
D GJQ55_05875 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GJQ55_06635 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJQ55_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03360 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_06625 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_09230 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJQ55_06225 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJQ55_02645 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D GJQ55_00985 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vcw00785]
D GJQ55_02335 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GJQ55_02340 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_02975 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJQ55_02980 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJQ55_05935 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GJQ55_05940 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJQ55_10530 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vcw00790]
D GJQ55_07755 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D GJQ55_01535 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GJQ55_03930 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GJQ55_10820 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GJQ55_10815 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GJQ55_01915 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GJQ55_04580 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GJQ55_03250 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GJQ55_12290 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GJQ55_07130 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GJQ55_01390 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJQ55_01665 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GJQ55_06490 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D GJQ55_06640 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D GJQ55_04575 SDR family oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D GJQ55_09330 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GJQ55_09325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GJQ55_05980 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GJQ55_05205 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GJQ55_05190 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GJQ55_05180 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GJQ55_05240 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJQ55_05195 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJQ55_05215 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GJQ55_10870 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D GJQ55_05200 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vcw00670]
D GJQ55_12290 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GJQ55_04575 SDR family oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D GJQ55_06170 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GJQ55_01690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJQ55_04985 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GJQ55_10710 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJQ55_00100 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GJQ55_06830 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GJQ55_12295 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GJQ55_02610 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D GJQ55_12120 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GJQ55_00445 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vcw00860]
D GJQ55_06000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJQ55_03435 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GJQ55_12015 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GJQ55_00655 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GJQ55_13055 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GJQ55_13050 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D GJQ55_11820 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GJQ55_00125 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D GJQ55_04935 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GJQ55_12010 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D GJQ55_10330 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GJQ55_13045 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GJQ55_06390 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D GJQ55_05745 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GJQ55_02930 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D GJQ55_02990 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GJQ55_03050 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D GJQ55_03055 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D GJQ55_03025 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D GJQ55_03040 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D GJQ55_03030 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D GJQ55_03035 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D GJQ55_03815 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D GJQ55_03820 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vcw00130]
D GJQ55_08540 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D GJQ55_00585 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D GJQ55_00580 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GJQ55_13020 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D GJQ55_02790 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GJQ55_00480 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D GJQ55_09100 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D GJQ55_00475 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D GJQ55_00820 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GJQ55_10730 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D GJQ55_01520 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D GJQ55_12820 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GJQ55_04730 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vcw00900]
D GJQ55_01375 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GJQ55_09255 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GJQ55_11050 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GJQ55_03420 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GJQ55_11045 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GJQ55_03660 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GJQ55_02430 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02790 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GJQ55_01370 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GJQ55_02370 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GJQ55_09265 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:vcw00907]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_01420 alcohol dehydrogenase catalytic domain-containing protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GJQ55_11605 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:vcw00523]
D GJQ55_03885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJQ55_03875 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJQ55_02815 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GJQ55_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D GJQ55_07970 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D GJQ55_03885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vcw00332]
D GJQ55_02390 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GJQ55_02280 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vcw00261]
D GJQ55_08200 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJQ55_08195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJQ55_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_00750 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJQ55_07160 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJQ55_08475 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GJQ55_03195 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vcw00521]
D GJQ55_04755 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJQ55_12670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_04020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GJQ55_01475 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJQ55_03620 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJQ55_03885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJQ55_03875 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJQ55_02815 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GJQ55_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D GJQ55_03885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:vcw00401]
D GJQ55_04965 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GJQ55_02685 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJQ55_02690 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GJQ55_06620 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJQ55_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03360 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_06625 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_06225 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GJQ55_06630 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vcw00999]
D GJQ55_12105 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GJQ55_00130 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vcw00362]
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GJQ55_08540 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_10555 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vcw00627]
D GJQ55_03350 SidA/IucD/PvdA family monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-]
D GJQ55_02790 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:vcw00625]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D GJQ55_08770 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vcw00930]
D GJQ55_08745 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D GJQ55_08775 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D GJQ55_03380 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vcw00626]
D GJQ55_08765 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vcw03020]
D GJQ55_01055 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJQ55_01060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJQ55_01225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJQ55_12715 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vcw03010]
D GJQ55_04975 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GJQ55_09285 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GJQ55_01130 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GJQ55_01220 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GJQ55_01185 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GJQ55_11685 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GJQ55_01070 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GJQ55_01170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GJQ55_11295 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GJQ55_01095 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GJQ55_01215 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GJQ55_01065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GJQ55_01210 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GJQ55_01165 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GJQ55_03300 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GJQ55_09850 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GJQ55_01145 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GJQ55_11680 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GJQ55_01120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GJQ55_02400 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GJQ55_10830 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GJQ55_01040 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GJQ55_01115 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GJQ55_01100 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GJQ55_01105 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GJQ55_01160 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GJQ55_01175 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GJQ55_01050 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GJQ55_11670 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GJQ55_01045 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GJQ55_01035 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GJQ55_11300 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GJQ55_01150 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GJQ55_01195 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GJQ55_01135 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GJQ55_01230 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GJQ55_01180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GJQ55_09835 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GJQ55_05275 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GJQ55_02375 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GJQ55_01125 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GJQ55_01110 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GJQ55_01155 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GJQ55_03405 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GJQ55_02380 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GJQ55_12650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GJQ55_01140 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GJQ55_01190 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GJQ55_11795 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJQ55_06610 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GJQ55_12645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GJQ55_13265 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GJQ55_05270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GJQ55_01205 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJQ55_11965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09315 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJQ55_11950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vcw00970]
D GJQ55_11955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_06005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_06015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_13200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_10935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_10940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_06180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_04260 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJQ55_08435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJQ55_08810 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_08820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_08830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_06460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GJQ55_03415 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJQ55_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_07295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_07305 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_01005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_06455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_07290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_07300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_06185 tRNA-His K14226 tRNA-His; tRNA His
D GJQ55_11960 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJQ55_00395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_08140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_03270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_06465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_08500 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJQ55_08505 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJQ55_04320 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_04325 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_04540 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_08205 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_11940 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GJQ55_13100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_05300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_06175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_10945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJQ55_05995 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJQ55_00540 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJQ55_01010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJQ55_01020 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GJQ55_01000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GJQ55_08805 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_05015 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_08815 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_06000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJQ55_11255 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GJQ55_11260 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GJQ55_11250 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GJQ55_06160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJQ55_10960 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJQ55_07405 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJQ55_00045 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJQ55_00040 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJQ55_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJQ55_06385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJQ55_06165 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJQ55_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJQ55_00100 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GJQ55_07935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJQ55_02835 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJQ55_02415 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJQ55_09615 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJQ55_11360 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJQ55_05710 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJQ55_03665 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJQ55_05280 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJQ55_05285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJQ55_11970 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJQ55_09135 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vcw03060]
D GJQ55_01200 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJQ55_01025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJQ55_03265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJQ55_08120 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJQ55_08115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJQ55_02015 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GJQ55_08125 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJQ55_13250 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJQ55_10400 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJQ55_02060 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJQ55_03775 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJQ55_06995 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GJQ55_12575 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJQ55_00795 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00935 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00790 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJQ55_00785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D GJQ55_08955 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GJQ55_02420 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJQ55_04360 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vcw04122]
D GJQ55_03640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJQ55_08590 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GJQ55_06410 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D GJQ55_06415 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D GJQ55_06420 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D GJQ55_06405 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D GJQ55_06315 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GJQ55_05180 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GJQ55_05205 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GJQ55_05185 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D GJQ55_05220 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D GJQ55_05190 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GJQ55_05240 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJQ55_05195 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJQ55_06715 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GJQ55_08370 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:vcw03018]
D GJQ55_12330 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GJQ55_06580 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJQ55_07065 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJQ55_03305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GJQ55_10220 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJQ55_12535 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJQ55_11740 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJQ55_09950 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GJQ55_00625 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GJQ55_11370 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GJQ55_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJQ55_10275 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJQ55_01840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJQ55_00650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJQ55_07740 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GJQ55_01920 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vcw03030]
D GJQ55_08995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06250 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_10195 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJQ55_06990 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJQ55_06655 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJQ55_02825 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJQ55_07925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJQ55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJQ55_11665 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GJQ55_10840 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_06245 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GJQ55_09215 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vcw03410]
D GJQ55_03865 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GJQ55_09610 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GJQ55_11930 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GJQ55_12640 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GJQ55_05720 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GJQ55_12695 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJQ55_06705 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_04590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vcw03420]
D GJQ55_08300 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GJQ55_01730 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GJQ55_05010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GJQ55_06445 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GJQ55_09935 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_12360 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vcw03430]
D GJQ55_11005 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GJQ55_01830 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GJQ55_09935 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_12360 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_05390 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D GJQ55_05465 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GJQ55_01365 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GJQ55_04590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_10195 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJQ55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJQ55_06990 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJQ55_02825 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJQ55_06655 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJQ55_08995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06250 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_07925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:vcw03440]
D GJQ55_04590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GJQ55_10075 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GJQ55_06980 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GJQ55_10995 recA; recombinase RecA K03553 recA; recombination protein RecA
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_08550 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GJQ55_08545 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GJQ55_08555 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GJQ55_12740 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GJQ55_05840 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GJQ55_05835 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GJQ55_05845 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GJQ55_10195 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJQ55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJQ55_06990 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJQ55_02825 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJQ55_06655 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJQ55_08995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06250 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_07925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJQ55_11800 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vcw03250]
D GJQ55_09160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vcw02010]
D GJQ55_05795 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D GJQ55_05790 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D GJQ55_05785 ATP-binding cassette domain-containing protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D GJQ55_02955 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GJQ55_02960 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GJQ55_02965 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GJQ55_11400 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D GJQ55_07345 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D GJQ55_07350 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D GJQ55_07355 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D GJQ55_11920 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GJQ55_11140 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GJQ55_11145 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GJQ55_11135 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D GJQ55_11150 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GJQ55_00500 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_07670 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_00505 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GJQ55_00510 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GJQ55_00515 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GJQ55_13035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GJQ55_06230 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D GJQ55_00375 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D GJQ55_00360 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D GJQ55_00365 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GJQ55_04195 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D GJQ55_04190 ATP-binding cassette domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GJQ55_06095 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GJQ55_06100 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GJQ55_09055 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D GJQ55_09060 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D GJQ55_09065 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D GJQ55_09070 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D GJQ55_08230 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D GJQ55_08225 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GJQ55_11175 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GJQ55_00925 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D GJQ55_00920 ATP-binding cassette domain-containing protein K19340 nosF; Cu-processing system ATP-binding protein
D GJQ55_12565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D GJQ55_12570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJQ55_06125 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GJQ55_07050 ATP-binding cassette domain-containing protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D GJQ55_10305 ATP-binding cassette domain-containing protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GJQ55_12985 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GJQ55_12990 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:vcw02060]
D GJQ55_12325 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D GJQ55_11200 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D GJQ55_11190 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vcw03070]
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_02545 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D GJQ55_02540 hypothetical protein K02452 gspC; general secretion pathway protein C
D GJQ55_06800 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D GJQ55_06795 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D GJQ55_06790 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D GJQ55_06785 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D GJQ55_06780 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D GJQ55_06775 hypothetical protein K02460 gspK; general secretion pathway protein K
D GJQ55_06770 hypothetical protein K02461 gspL; general secretion pathway protein L
D GJQ55_06765 hypothetical protein K02462 gspM; general secretion pathway protein M
D GJQ55_12255 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GJQ55_06805 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GJQ55_08120 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJQ55_02015 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GJQ55_08115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJQ55_01025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJQ55_03265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJQ55_01200 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJQ55_08125 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJQ55_13250 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJQ55_10400 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJQ55_12575 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJQ55_02060 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJQ55_03775 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJQ55_00795 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00935 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00790 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJQ55_00785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vcw02020]
D GJQ55_00530 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_00570 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_00535 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJQ55_00575 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJQ55_01535 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GJQ55_03930 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GJQ55_00500 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_07670 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_10905 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D GJQ55_00410 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_01450 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_00405 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_01445 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_09380 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D GJQ55_09385 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D GJQ55_10100 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJQ55_10910 response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D GJQ55_04405 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GJQ55_04400 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_04410 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_04435 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D GJQ55_04440 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D GJQ55_09645 hypothetical protein K02406 fliC; flagellin
D GJQ55_09485 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GJQ55_09460 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D GJQ55_11075 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_01360 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D GJQ55_01785 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJQ55_13065 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GJQ55_13060 response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D GJQ55_05110 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJQ55_05210 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJQ55_05115 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05120 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05130 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05125 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D GJQ55_10060 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GJQ55_06440 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D GJQ55_10950 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D GJQ55_09295 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D GJQ55_02085 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D GJQ55_02080 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02475 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJQ55_02470 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D GJQ55_11180 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GJQ55_10630 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJQ55_09720 methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GJQ55_11455 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_11750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_12025 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02100 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02805 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02985 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_03685 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_04815 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_07855 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08755 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_02850 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_09440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GJQ55_09480 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GJQ55_09465 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GJQ55_09725 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_05895 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_12175 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D GJQ55_12180 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D GJQ55_12185 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D GJQ55_12170 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D GJQ55_12195 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D GJQ55_12190 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D GJQ55_12165 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D GJQ55_12160 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D GJQ55_03200 TetR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D GJQ55_01240 TRAP transporter small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D GJQ55_01235 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GJQ55_09595 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D GJQ55_09590 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D GJQ55_09585 response regulator K10943 flrC; two-component system, response regulator FlrC
D GJQ55_10175 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_02725 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_11315 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D GJQ55_11320 response regulator K15012 regA; two-component system, response regulator RegA
D GJQ55_11290 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GJQ55_11285 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJQ55_11280 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GJQ55_07585 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GJQ55_07590 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D GJQ55_07595 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D GJQ55_07600 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D GJQ55_01265 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GJQ55_01270 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GJQ55_01275 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_06140 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D GJQ55_07315 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D GJQ55_09550 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D GJQ55_09735 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vcw04148]
D GJQ55_10300 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GJQ55_11290 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vcw02024]
D GJQ55_01840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJQ55_03200 TetR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D GJQ55_02685 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJQ55_02690 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GJQ55_10585 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJQ55_07275 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJQ55_13035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GJQ55_06875 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_07785 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_10175 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_02725 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_00370 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GJQ55_01390 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJQ55_01675 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GJQ55_07905 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJQ55_05595 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GJQ55_05600 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GJQ55_05605 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GJQ55_05610 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GJQ55_13250 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJQ55_00250 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D GJQ55_02015 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GJQ55_01025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJQ55_03265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJQ55_01200 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJQ55_08125 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJQ55_10400 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJQ55_12575 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJQ55_02060 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJQ55_03775 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vcw02030]
D GJQ55_11455 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_11750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_12025 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02100 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02805 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02985 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_03685 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_04815 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_07855 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08755 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_02850 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_09470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GJQ55_09440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09480 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GJQ55_09475 protein phosphatase K03414 cheZ; chemotaxis protein CheZ
D GJQ55_09465 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GJQ55_09725 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_05895 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_09720 methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GJQ55_09570 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GJQ55_09535 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GJQ55_09530 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GJQ55_09460 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D GJQ55_11075 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_01360 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D GJQ55_01785 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_09455 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_11080 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01355 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01790 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vcw02040]
D GJQ55_09580 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GJQ55_09575 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GJQ55_09570 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GJQ55_09565 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D GJQ55_09560 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GJQ55_09555 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D GJQ55_09545 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D GJQ55_09540 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GJQ55_12930 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GJQ55_09535 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GJQ55_09530 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GJQ55_09525 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GJQ55_09520 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GJQ55_09515 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GJQ55_09510 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GJQ55_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GJQ55_09505 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GJQ55_09730 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GJQ55_09715 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GJQ55_09710 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GJQ55_09705 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GJQ55_09695 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D GJQ55_09690 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GJQ55_09685 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D GJQ55_09680 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GJQ55_09670 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D GJQ55_09665 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GJQ55_09660 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D GJQ55_10800 hypothetical protein K09860 flgP; outer membrane protein FlgP
D GJQ55_04780 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D GJQ55_09645 hypothetical protein K02406 fliC; flagellin
D GJQ55_09600 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D GJQ55_09460 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D GJQ55_11075 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_01360 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D GJQ55_01785 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_09455 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_11080 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01355 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01790 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D GJQ55_09735 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D GJQ55_10845 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GJQ55_09595 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D GJQ55_11180 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GJQ55_09585 response regulator K10943 flrC; two-component system, response regulator FlrC
D GJQ55_09485 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:vcw04980]
D GJQ55_02990 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GJQ55_06830 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vcw01501]
D GJQ55_03010 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GJQ55_08315 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GJQ55_04605 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJQ55_04600 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJQ55_07905 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_11880 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJQ55_02260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJQ55_10470 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vcw01502]
D GJQ55_10430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJQ55_11635 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJQ55_10460 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GJQ55_10455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJQ55_10440 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vcw01503]
D GJQ55_00410 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_01450 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_00405 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_01445 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_01825 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJQ55_10100 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJQ55_00340 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJQ55_09160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GJQ55_04605 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJQ55_04600 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_09225 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vcw01000]
C 01001 Protein kinases [BR:vcw01001]
D GJQ55_05525 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D GJQ55_04185 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D GJQ55_00530 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_00570 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_10905 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D GJQ55_09380 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D GJQ55_00410 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_01450 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_04405 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GJQ55_05110 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJQ55_10060 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GJQ55_13065 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GJQ55_02085 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D GJQ55_02475 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJQ55_09920 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GJQ55_01380 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GJQ55_09470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GJQ55_12170 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D GJQ55_09590 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D GJQ55_11315 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D GJQ55_07315 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D GJQ55_05635 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
D GJQ55_10720 response regulator K20972 retS; two-component system, sensor histidine kinase RetS
C 01009 Protein phosphatases and associated proteins [BR:vcw01009]
D GJQ55_12115 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GJQ55_01755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vcw01002]
D GJQ55_02420 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJQ55_04360 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJQ55_10650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJQ55_05490 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GJQ55_07115 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GJQ55_11835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GJQ55_00320 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJQ55_05245 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D GJQ55_12315 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D GJQ55_08860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GJQ55_00185 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D GJQ55_06670 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-]
D GJQ55_11700 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJQ55_08235 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJQ55_07915 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GJQ55_09290 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GJQ55_00470 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GJQ55_03245 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GJQ55_12755 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D GJQ55_08490 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D GJQ55_09250 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GJQ55_07490 hypothetical protein K09933 mtfA; MtfA peptidase
D GJQ55_10100 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJQ55_11105 trypsin-like serine protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D GJQ55_00250 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D GJQ55_02325 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GJQ55_06200 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GJQ55_06210 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GJQ55_07465 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GJQ55_08330 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GJQ55_08955 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GJQ55_08585 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GJQ55_02040 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GJQ55_06600 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D GJQ55_06855 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D GJQ55_08875 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D GJQ55_11760 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D GJQ55_12625 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJQ55_07220 tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D GJQ55_11610 collagenase-like protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D GJQ55_05035 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D GJQ55_05030 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D GJQ55_01855 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D GJQ55_01850 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vcw01003]
D GJQ55_12035 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GJQ55_11880 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vcw01005]
D GJQ55_09225 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GJQ55_09220 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GJQ55_10410 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GJQ55_09235 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GJQ55_03740 phosphatase PAP2 family protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D GJQ55_06150 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GJQ55_06130 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GJQ55_12245 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJQ55_00065 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJQ55_12235 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GJQ55_00735 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D GJQ55_02395 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GJQ55_06025 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GJQ55_06020 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GJQ55_11160 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GJQ55_12155 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D GJQ55_00740 ADP-heptose--LPS heptosyltransferase I K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D GJQ55_03455 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GJQ55_00035 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GJQ55_12240 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GJQ55_04945 hypothetical protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D GJQ55_04170 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcw01011]
D GJQ55_11125 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJQ55_06145 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJQ55_10435 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GJQ55_10450 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJQ55_10465 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJQ55_10430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJQ55_11635 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJQ55_07750 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GJQ55_10455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJQ55_10440 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GJQ55_10015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_02160 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJQ55_02405 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GJQ55_11880 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJQ55_12035 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GJQ55_02260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJQ55_10470 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJQ55_02325 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GJQ55_12315 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D GJQ55_02250 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D GJQ55_12530 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D GJQ55_03970 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D GJQ55_06235 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D GJQ55_09900 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D GJQ55_06645 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GJQ55_02245 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GJQ55_01825 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJQ55_10615 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:vcw01004]
D GJQ55_06620 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJQ55_07495 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D GJQ55_05875 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GJQ55_06635 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJQ55_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03360 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_06625 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJQ55_03225 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D GJQ55_09230 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJQ55_06225 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJQ55_01460 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GJQ55_01480 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D GJQ55_05440 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D GJQ55_00485 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D GJQ55_07040 YbgC/FadM family acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D GJQ55_02910 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GJQ55_08260 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GJQ55_09190 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D GJQ55_07790 acyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D GJQ55_09015 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GJQ55_05960 AMP-binding protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D GJQ55_06875 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_07785 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_03605 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GJQ55_06615 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GJQ55_00030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJQ55_00680 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:vcw01006]
D GJQ55_01370 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GJQ55_02370 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GJQ55_09265 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GJQ55_01835 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GJQ55_12820 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GJQ55_00580 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:vcw01007]
D GJQ55_06000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJQ55_06160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJQ55_01965 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GJQ55_11970 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJQ55_09135 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GJQ55_06165 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJQ55_11360 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJQ55_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJQ55_02415 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJQ55_07935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJQ55_02835 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJQ55_09615 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJQ55_07405 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJQ55_03665 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJQ55_00045 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJQ55_00040 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJQ55_06385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJQ55_05710 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJQ55_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJQ55_10960 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJQ55_05280 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJQ55_05285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJQ55_05005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GJQ55_07335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJQ55_11445 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D GJQ55_11110 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_04960 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJQ55_09355 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GJQ55_00760 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D GJQ55_12015 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GJQ55_12050 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJQ55_04950 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vcw00194]
D GJQ55_13105 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GJQ55_13110 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GJQ55_13115 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GJQ55_13120 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GJQ55_13125 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GJQ55_13130 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GJQ55_13135 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GJQ55_13140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJQ55_13145 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vcw03000]
D GJQ55_01530 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GJQ55_11430 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D GJQ55_09375 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D GJQ55_11575 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D GJQ55_12735 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GJQ55_07270 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D GJQ55_11720 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D GJQ55_09340 hdfR; HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D GJQ55_12680 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D GJQ55_11810 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D GJQ55_03200 TetR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D GJQ55_09925 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJQ55_01725 DNA-binding response regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D GJQ55_02860 AAA family ATPase K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D GJQ55_07320 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GJQ55_02755 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D GJQ55_02920 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D GJQ55_03170 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GJQ55_00370 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GJQ55_10175 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_02725 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GJQ55_07630 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D GJQ55_03635 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D GJQ55_07710 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D GJQ55_12365 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D GJQ55_00985 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GJQ55_10705 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJQ55_09595 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D GJQ55_05225 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D GJQ55_04330 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator
D GJQ55_00905 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D GJQ55_07680 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D GJQ55_13150 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GJQ55_04010 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D GJQ55_10310 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D GJQ55_12220 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GJQ55_12210 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D GJQ55_01960 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJQ55_01680 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D GJQ55_10485 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:vcw03021]
D GJQ55_01225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJQ55_01055 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJQ55_01060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJQ55_12715 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GJQ55_10845 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GJQ55_11015 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D GJQ55_10120 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GJQ55_12560 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D GJQ55_11180 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GJQ55_09485 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GJQ55_06755 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D GJQ55_03280 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GJQ55_01655 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GJQ55_01030 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GJQ55_11275 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D GJQ55_11270 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D GJQ55_10115 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D GJQ55_10110 hypothetical protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D GJQ55_10105 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D GJQ55_01960 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJQ55_03215 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GJQ55_07645 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D GJQ55_00625 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:vcw03019]
D GJQ55_06580 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJQ55_11225 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GJQ55_10085 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJQ55_11370 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GJQ55_11740 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJQ55_01800 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GJQ55_07065 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D GJQ55_10220 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJQ55_12535 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJQ55_09950 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJQ55_03305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GJQ55_00625 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GJQ55_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJQ55_10275 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJQ55_01840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJQ55_00650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJQ55_07740 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GJQ55_01920 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D GJQ55_12330 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GJQ55_10950 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D GJQ55_06540 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A
D GJQ55_11195 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D GJQ55_06870 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D GJQ55_08625 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vcw03011]
D GJQ55_04975 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GJQ55_09285 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GJQ55_01130 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GJQ55_01220 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GJQ55_01185 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GJQ55_11685 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GJQ55_01070 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GJQ55_01170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GJQ55_11295 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GJQ55_01095 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GJQ55_01215 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GJQ55_01065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GJQ55_01210 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GJQ55_01165 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GJQ55_03300 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GJQ55_09850 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GJQ55_01145 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GJQ55_11680 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GJQ55_01120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GJQ55_02400 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GJQ55_10830 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GJQ55_01040 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GJQ55_01115 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GJQ55_01100 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GJQ55_01105 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GJQ55_01160 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GJQ55_01175 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GJQ55_11670 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GJQ55_01045 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GJQ55_01035 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GJQ55_01050 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GJQ55_11300 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GJQ55_01150 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GJQ55_01195 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GJQ55_01135 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GJQ55_01230 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GJQ55_01180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GJQ55_09835 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GJQ55_05275 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GJQ55_02375 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GJQ55_01125 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GJQ55_01110 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GJQ55_01155 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GJQ55_02380 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GJQ55_12650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GJQ55_01140 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GJQ55_01190 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GJQ55_11795 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJQ55_06610 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GJQ55_12645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GJQ55_13265 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GJQ55_05270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GJQ55_01205 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJQ55_03405 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GJQ55_11965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09315 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJQ55_11950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vcw03009]
D GJQ55_10085 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJQ55_05525 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D GJQ55_01800 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GJQ55_10080 GTPase Era K03595 era; GTPase
D GJQ55_02385 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GJQ55_01960 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJQ55_03280 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GJQ55_01655 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GJQ55_01030 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GJQ55_07455 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GJQ55_10770 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GJQ55_10295 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GJQ55_00095 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GJQ55_02750 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D GJQ55_12585 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GJQ55_01345 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GJQ55_13160 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GJQ55_10480 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GJQ55_03470 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GJQ55_10010 rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D GJQ55_07920 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D GJQ55_11735 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GJQ55_03240 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D GJQ55_07480 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D GJQ55_07205 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D GJQ55_02265 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GJQ55_12345 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D GJQ55_08110 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D GJQ55_08665 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D GJQ55_03650 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GJQ55_10050 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GJQ55_07225 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJQ55_07875 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJQ55_09120 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GJQ55_06590 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D GJQ55_11525 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GJQ55_02490 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GJQ55_06325 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D GJQ55_01565 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D GJQ55_11330 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GJQ55_10200 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D GJQ55_03690 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D GJQ55_09845 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D GJQ55_07450 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D GJQ55_05865 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D GJQ55_10690 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GJQ55_04285 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D GJQ55_06035 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D GJQ55_06580 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJQ55_11225 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GJQ55_12215 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GJQ55_05430 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D GJQ55_09950 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GJQ55_01795 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GJQ55_03680 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D GJQ55_07695 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D GJQ55_01845 hflX; GTPase HflX K03665 hflX; GTPase
D GJQ55_00120 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GJQ55_12720 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GJQ55_03290 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D GJQ55_03275 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D GJQ55_02270 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GJQ55_10370 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D GJQ55_03235 ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D GJQ55_11210 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D GJQ55_08670 ribosome modulation factor K03812 rmf; ribosome modulation factor
D GJQ55_11185 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D GJQ55_03395 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D GJQ55_06605 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vcw03016]
D GJQ55_10810 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GJQ55_06000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJQ55_05710 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJQ55_02415 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJQ55_02835 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJQ55_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJQ55_06160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJQ55_11360 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJQ55_09615 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJQ55_07405 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJQ55_10960 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJQ55_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJQ55_06385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJQ55_06165 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJQ55_07935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJQ55_03665 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJQ55_05280 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJQ55_05285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJQ55_11970 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJQ55_09135 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GJQ55_11405 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GJQ55_13010 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GJQ55_03505 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D GJQ55_07150 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GJQ55_03295 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GJQ55_11040 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D GJQ55_03640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJQ55_00120 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GJQ55_01835 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GJQ55_13245 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GJQ55_13205 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GJQ55_13260 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GJQ55_03490 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D GJQ55_04770 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D GJQ55_12700 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GJQ55_03925 VacB/RNase II family 3'-5' exoribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D GJQ55_06975 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D GJQ55_01700 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D GJQ55_00045 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJQ55_00040 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJQ55_01965 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GJQ55_01635 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GJQ55_06305 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D GJQ55_10700 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GJQ55_10570 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D GJQ55_10360 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GJQ55_10595 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D GJQ55_10590 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D GJQ55_10925 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D GJQ55_08065 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D GJQ55_05435 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D GJQ55_09840 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GJQ55_00555 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D GJQ55_03625 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D GJQ55_02070 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GJQ55_11565 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GJQ55_09825 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D GJQ55_07225 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJQ55_07875 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJQ55_06315 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GJQ55_07635 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D GJQ55_08590 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GJQ55_06410 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D GJQ55_06415 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D GJQ55_06420 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D GJQ55_06405 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D GJQ55_04630 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D GJQ55_10140 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D GJQ55_07035 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D GJQ55_09170 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D GJQ55_08135 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GJQ55_09325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GJQ55_09330 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GJQ55_05980 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GJQ55_01810 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D GJQ55_08130 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GJQ55_06715 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GJQ55_10190 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GJQ55_10020 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GJQ55_10825 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GJQ55_01820 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GJQ55_04665 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GJQ55_11740 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJQ55_03305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vcw03012]
D GJQ55_09915 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D GJQ55_03285 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GJQ55_05265 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GJQ55_12970 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GJQ55_09280 elongation factor Ts K02357 tsf; elongation factor Ts
D GJQ55_01015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01075 fusA; elongation factor G K02355 fusA; elongation factor G
D GJQ55_01085 elongation factor G K02355 fusA; elongation factor G
D GJQ55_03440 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GJQ55_09270 ribosome recycling factor K02838 frr; ribosome recycling factor
D GJQ55_03445 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GJQ55_03400 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GJQ55_06350 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GJQ55_03100 efp; elongation factor P K02356 efp; elongation factor P
D GJQ55_09620 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GJQ55_11310 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D GJQ55_02515 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:vcw03110]
D GJQ55_06345 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D GJQ55_08565 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GJQ55_06205 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GJQ55_11755 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GJQ55_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJQ55_10275 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJQ55_03190 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GJQ55_10740 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D GJQ55_12840 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D GJQ55_03180 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GJQ55_12835 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D GJQ55_10280 co-chaperone GroES K04078 groES; chaperonin GroES
D GJQ55_10100 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJQ55_03245 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GJQ55_13140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJQ55_02060 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJQ55_10665 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D GJQ55_00250 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D GJQ55_09160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GJQ55_06155 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GJQ55_06220 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D GJQ55_08440 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D GJQ55_02425 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D GJQ55_11765 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GJQ55_03600 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GJQ55_10005 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GJQ55_02130 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GJQ55_05135 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GJQ55_10760 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D GJQ55_00630 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D GJQ55_02350 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D GJQ55_02855 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GJQ55_00340 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJQ55_12935 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D GJQ55_09830 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GJQ55_02365 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D GJQ55_09040 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vcw04131]
D GJQ55_03645 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJQ55_02110 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D GJQ55_08295 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:vcw03051]
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vcw03032]
D GJQ55_06245 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GJQ55_00600 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D GJQ55_06215 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJQ55_05290 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJQ55_03990 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJQ55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJQ55_11665 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GJQ55_10840 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_10195 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJQ55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJQ55_07925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJQ55_02825 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJQ55_06655 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJQ55_08995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06250 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06990 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJQ55_09215 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GJQ55_05000 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D GJQ55_04940 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GJQ55_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GJQ55_12480 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJQ55_12465 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJQ55_08900 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GJQ55_12080 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vcw03036]
D GJQ55_10085 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJQ55_00600 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D GJQ55_06215 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJQ55_05290 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJQ55_03990 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJQ55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJQ55_03080 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D GJQ55_10705 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJQ55_01840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJQ55_09925 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJQ55_04670 hypothetical protein K06899 ndpA; nucleoid-associated protein
D GJQ55_08735 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D GJQ55_09130 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GJQ55_09125 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D GJQ55_10420 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GJQ55_11055 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D GJQ55_12570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJQ55_10470 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJQ55_06365 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GJQ55_10475 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GJQ55_10425 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D GJQ55_10445 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GJQ55_12565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D GJQ55_10415 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJQ55_08730 hypothetical protein K03528 zipA; cell division protein ZipA
D GJQ55_00455 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D GJQ55_00460 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D GJQ55_08185 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D GJQ55_01825 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJQ55_04605 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJQ55_02145 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GJQ55_02140 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GJQ55_02135 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GJQ55_08335 hypothetical protein K13053 sulA; cell division inhibitor SulA
D GJQ55_12680 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D GJQ55_11245 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJQ55_11240 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GJQ55_11235 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GJQ55_02255 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GJQ55_09450 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_12955 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_13155 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_13150 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GJQ55_12480 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJQ55_12465 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJQ55_13205 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GJQ55_13160 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GJQ55_05620 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GJQ55_05695 winged helix-turn-helix transcriptional regulator K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D GJQ55_00355 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vcw03400]
D GJQ55_02915 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D GJQ55_09610 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GJQ55_11930 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GJQ55_03865 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GJQ55_12795 endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D GJQ55_10390 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GJQ55_12665 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GJQ55_01530 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GJQ55_05720 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GJQ55_12640 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GJQ55_12695 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJQ55_06705 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJQ55_04590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJQ55_08725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GJQ55_12790 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJQ55_01730 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GJQ55_05010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GJQ55_06445 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GJQ55_09935 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_12360 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJQ55_01055 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJQ55_01060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJQ55_01225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJQ55_12715 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GJQ55_08300 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GJQ55_11005 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GJQ55_01830 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GJQ55_05390 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D GJQ55_05465 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GJQ55_01365 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GJQ55_10195 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJQ55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJQ55_07925 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJQ55_02825 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJQ55_06655 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJQ55_08995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06250 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJQ55_06990 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_05840 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GJQ55_05835 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GJQ55_05845 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GJQ55_10995 recA; recombinase RecA K03553 recA; recombination protein RecA
D GJQ55_08550 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GJQ55_08545 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GJQ55_08555 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GJQ55_11800 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GJQ55_01325 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GJQ55_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GJQ55_12740 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GJQ55_10075 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GJQ55_06980 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GJQ55_03175 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GJQ55_04940 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GJQ55_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GJQ55_08900 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GJQ55_00600 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D GJQ55_06215 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJQ55_10705 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJQ55_05290 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJQ55_03990 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJQ55_02155 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GJQ55_08330 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GJQ55_01995 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D GJQ55_10990 hypothetical protein K03565 recX; regulatory protein
D GJQ55_00265 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D GJQ55_06080 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GJQ55_09390 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJQ55_09395 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vcw03029]
D GJQ55_11285 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJQ55_03285 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GJQ55_05265 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GJQ55_09280 elongation factor Ts K02357 tsf; elongation factor Ts
D GJQ55_01015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01075 fusA; elongation factor G K02355 fusA; elongation factor G
D GJQ55_01085 elongation factor G K02355 fusA; elongation factor G
D GJQ55_10080 GTPase Era K03595 era; GTPase
D GJQ55_11970 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJQ55_02835 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJQ55_07405 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJQ55_11360 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJQ55_11255 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GJQ55_11260 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GJQ55_11250 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GJQ55_01715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJQ55_09245 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GJQ55_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJQ55_03180 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GJQ55_10275 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJQ55_10280 co-chaperone GroES K04078 groES; chaperonin GroES
D GJQ55_03190 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GJQ55_03640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJQ55_02855 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GJQ55_05620 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GJQ55_13250 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJQ55_00245 redoxin domain-containing protein K07152 SCO1; protein SCO1
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vcw02000]
D GJQ55_06125 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GJQ55_07050 ATP-binding cassette domain-containing protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D GJQ55_10305 ATP-binding cassette domain-containing protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GJQ55_12985 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GJQ55_12990 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GJQ55_08790 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D GJQ55_02955 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GJQ55_02960 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GJQ55_02965 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GJQ55_11400 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D GJQ55_05795 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D GJQ55_05790 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D GJQ55_05785 ATP-binding cassette domain-containing protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D GJQ55_07345 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D GJQ55_07350 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D GJQ55_07355 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D GJQ55_11140 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GJQ55_11145 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GJQ55_11150 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GJQ55_11920 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GJQ55_11135 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D GJQ55_00500 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_07670 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D GJQ55_00505 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GJQ55_00510 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GJQ55_00515 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GJQ55_13035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GJQ55_10930 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GJQ55_00420 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GJQ55_00825 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GJQ55_05595 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GJQ55_05600 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GJQ55_05605 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GJQ55_05610 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GJQ55_06230 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D GJQ55_01935 iron chelate uptake ABC transporter family permease subunit K25133 hmuU; heme transport system permease protein
D GJQ55_01930 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D GJQ55_03060 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GJQ55_00375 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D GJQ55_00360 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D GJQ55_00365 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GJQ55_04195 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D GJQ55_04190 ATP-binding cassette domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GJQ55_08230 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D GJQ55_08225 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GJQ55_11175 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GJQ55_00925 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D GJQ55_00920 ATP-binding cassette domain-containing protein K19340 nosF; Cu-processing system ATP-binding protein
D GJQ55_06095 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GJQ55_06100 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GJQ55_09055 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D GJQ55_09060 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D GJQ55_09065 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D GJQ55_09070 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D GJQ55_12565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D GJQ55_12570 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJQ55_00900 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GJQ55_05975 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GJQ55_05970 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GJQ55_11460 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GJQ55_01490 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GJQ55_03720 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GJQ55_05310 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GJQ55_05315 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GJQ55_11465 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GJQ55_01485 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GJQ55_03725 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GJQ55_05320 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GJQ55_04645 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GJQ55_03755 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GJQ55_07070 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D GJQ55_06835 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D GJQ55_04295 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D GJQ55_01415 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D GJQ55_05145 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJQ55_05155 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJQ55_03010 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GJQ55_10335 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D GJQ55_12325 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D GJQ55_11200 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D GJQ55_11190 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D GJQ55_12375 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GJQ55_02600 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D GJQ55_04715 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJQ55_11275 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D GJQ55_08705 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D GJQ55_08710 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D GJQ55_08100 BAX inhibitor (BI)-1/YccA family protein K19416 yccA; modulator of FtsH protease
D GJQ55_13030 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D GJQ55_05420 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D GJQ55_11205 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D GJQ55_09460 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D GJQ55_11075 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_01360 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D GJQ55_01785 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_09455 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_11080 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01355 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01790 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D GJQ55_04780 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D GJQ55_12890 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_03570 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB
D GJQ55_03575 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_06115 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_06680 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_06685 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_06905 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GJQ55_03580 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GJQ55_06120 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GJQ55_06690 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GJQ55_08535 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D GJQ55_08530 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D GJQ55_06380 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D GJQ55_03785 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D GJQ55_03765 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GJQ55_12980 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GJQ55_08935 outer membrane beta-barrel protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GJQ55_00160 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D GJQ55_03510 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D GJQ55_06710 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D GJQ55_07575 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D GJQ55_05085 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GJQ55_11650 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJQ55_02770 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJQ55_02995 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJQ55_03730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJQ55_04460 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_07905 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJQ55_11475 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D GJQ55_09245 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GJQ55_03675 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D GJQ55_08470 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D GJQ55_02485 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D GJQ55_03165 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D GJQ55_11170 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D GJQ55_11165 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D GJQ55_10755 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D GJQ55_02830 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D GJQ55_10375 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D GJQ55_04875 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D GJQ55_03085 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D GJQ55_04470 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D GJQ55_04440 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D GJQ55_04600 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJQ55_08800 AcrB/AcrD/AcrF family protein K18989 vexF; multidrug efflux pump
D GJQ55_08080 sugE; quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D GJQ55_00050 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D GJQ55_11155 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D GJQ55_02020 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D GJQ55_08985 cation acetate symporter K14393 actP; cation/acetate symporter
D GJQ55_05235 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D GJQ55_12040 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D GJQ55_00070 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D GJQ55_07280 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D GJQ55_00085 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D GJQ55_00090 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D GJQ55_09990 uracil permease K02824 uraA; uracil permease
D GJQ55_04680 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GJQ55_12005 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D GJQ55_05670 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D GJQ55_00080 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D GJQ55_00840 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D GJQ55_01240 TRAP transporter small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D GJQ55_01235 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D GJQ55_09855 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D GJQ55_00975 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D GJQ55_01405 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D GJQ55_01295 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D GJQ55_01300 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D GJQ55_01305 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D GJQ55_01310 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D GJQ55_01315 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D GJQ55_01320 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D GJQ55_02405 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GJQ55_09165 AEC family transporter K24180 mleP; malate permease and related proteins
D GJQ55_10895 lysine transporter LysE K05835 rhtC; threonine efflux protein
D GJQ55_11380 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D GJQ55_11385 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump
D GJQ55_08480 AI-2E family transporter K03548 perM; putative permease
D GJQ55_10445 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GJQ55_02110 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D GJQ55_10510 TonB family protein K03832 tonB; periplasmic protein TonB
D GJQ55_12205 TonB family protein K03832 tonB; periplasmic protein TonB
D GJQ55_02320 hypothetical protein K03832 tonB; periplasmic protein TonB
D GJQ55_03585 TonB family protein K03832 tonB; periplasmic protein TonB
D GJQ55_06695 TonB family protein K03832 tonB; periplasmic protein TonB
D GJQ55_08515 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D GJQ55_08525 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D GJQ55_08520 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D GJQ55_10555 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D GJQ55_10560 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D GJQ55_10565 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D GJQ55_05115 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05120 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_05130 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJQ55_04465 HlyD family efflux transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D GJQ55_04435 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D GJQ55_04605 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJQ55_08795 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D GJQ55_12770 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D GJQ55_03915 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D GJQ55_03910 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B
D GJQ55_09045 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D GJQ55_09090 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D GJQ55_04385 copper-binding protein K07245 pcoD; copper resistance protein D
D GJQ55_04380 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:vcw02044]
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GJQ55_06070 AAA family ATPase K02450 gspA; general secretion pathway protein A
D GJQ55_06075 hypothetical protein K02451 gspB; general secretion pathway protein B
D GJQ55_02540 hypothetical protein K02452 gspC; general secretion pathway protein C
D GJQ55_02545 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D GJQ55_12255 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GJQ55_06805 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GJQ55_06800 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D GJQ55_06795 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D GJQ55_06790 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D GJQ55_06785 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D GJQ55_06780 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D GJQ55_06775 hypothetical protein K02460 gspK; general secretion pathway protein K
D GJQ55_06770 hypothetical protein K02461 gspL; general secretion pathway protein L
D GJQ55_06765 hypothetical protein K02462 gspM; general secretion pathway protein M
D GJQ55_02535 hypothetical protein K02463 gspN; general secretion pathway protein N
D GJQ55_10650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJQ55_10630 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJQ55_10640 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GJQ55_10645 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GJQ55_02435 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D GJQ55_03655 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D GJQ55_12195 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D GJQ55_12190 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D GJQ55_12185 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D GJQ55_12180 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D GJQ55_12175 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D GJQ55_11875 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D GJQ55_11870 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D GJQ55_11865 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D GJQ55_11860 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D GJQ55_11855 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D GJQ55_00865 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D GJQ55_09860 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJQ55_00870 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJQ55_02445 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D GJQ55_02440 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D GJQ55_02460 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D GJQ55_02455 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D GJQ55_06660 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D GJQ55_02465 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D GJQ55_02450 prepilin-type N-terminal cleavage/methylation domain-containing protein K08085 fimU; type IV fimbrial biogenesis protein FimU
D GJQ55_07155 hypothetical protein K08086 fimV; pilus assembly protein FimV
D GJQ55_00850 YggT family protein K02221 yggT; YggT family protein
D GJQ55_08905 hypothetical protein K02237 comEA; competence protein ComEA
D GJQ55_06110 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GJQ55_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GJQ55_09505 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GJQ55_09080 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D GJQ55_09575 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GJQ55_09565 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D GJQ55_09560 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GJQ55_09530 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GJQ55_09525 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GJQ55_09520 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GJQ55_09515 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GJQ55_09510 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GJQ55_09830 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GJQ55_10400 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJQ55_02060 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJQ55_08120 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJQ55_02015 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GJQ55_01025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJQ55_08115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJQ55_03265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJQ55_01200 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJQ55_03775 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJQ55_12575 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJQ55_08125 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJQ55_13250 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJQ55_00795 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00935 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GJQ55_00790 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJQ55_00785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vcw02042]
D GJQ55_03765 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GJQ55_12980 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GJQ55_02520 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:vcw02022]
D GJQ55_00530 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_00570 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJQ55_00535 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJQ55_00575 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJQ55_10905 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D GJQ55_09380 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D GJQ55_09385 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D GJQ55_00410 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_01450 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GJQ55_00405 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_01445 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GJQ55_10910 response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D GJQ55_04405 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GJQ55_04400 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_04410 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_13180 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D GJQ55_05110 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJQ55_05210 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJQ55_10060 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GJQ55_06440 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D GJQ55_13065 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GJQ55_13060 response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D GJQ55_02085 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D GJQ55_02080 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D GJQ55_02475 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJQ55_02470 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D GJQ55_09920 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GJQ55_01380 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GJQ55_09470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GJQ55_09480 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GJQ55_09465 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GJQ55_09725 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_05895 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_12170 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D GJQ55_12195 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D GJQ55_12190 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D GJQ55_12165 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D GJQ55_09590 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D GJQ55_09585 response regulator K10943 flrC; two-component system, response regulator FlrC
D GJQ55_11315 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D GJQ55_11320 response regulator K15012 regA; two-component system, response regulator RegA
D GJQ55_07315 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D GJQ55_09550 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D GJQ55_05635 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
D GJQ55_10720 response regulator K20972 retS; two-component system, sensor histidine kinase RetS
C 02035 Bacterial motility proteins [BR:vcw02035]
D GJQ55_09470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GJQ55_09440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GJQ55_09720 methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GJQ55_09465 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GJQ55_09480 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GJQ55_09475 protein phosphatase K03414 cheZ; chemotaxis protein CheZ
D GJQ55_09725 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_05895 response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D GJQ55_11455 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_11750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_12025 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02100 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02805 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_02985 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_03685 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_04815 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_07855 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GJQ55_08755 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_02850 PAS domain-containing protein K03776 aer; aerotaxis receptor
D GJQ55_09565 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D GJQ55_09560 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GJQ55_09555 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D GJQ55_09525 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GJQ55_09520 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GJQ55_09515 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GJQ55_09510 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GJQ55_09500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GJQ55_09505 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GJQ55_09570 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GJQ55_09535 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GJQ55_09530 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GJQ55_09575 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GJQ55_09680 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GJQ55_09730 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GJQ55_09685 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D GJQ55_09540 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GJQ55_12930 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GJQ55_09580 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GJQ55_09545 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D GJQ55_09715 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GJQ55_09710 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GJQ55_09705 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GJQ55_09695 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D GJQ55_09690 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GJQ55_09670 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D GJQ55_09665 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GJQ55_09660 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D GJQ55_10800 hypothetical protein K09860 flgP; outer membrane protein FlgP
D GJQ55_04780 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D GJQ55_09645 hypothetical protein K02406 fliC; flagellin
D GJQ55_09600 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D GJQ55_09485 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GJQ55_09460 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D GJQ55_11075 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_01360 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D GJQ55_01785 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GJQ55_09455 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_11080 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01355 OmpA family protein K02557 motB; chemotaxis protein MotB
D GJQ55_01790 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D GJQ55_09595 AAA domain-containing protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D GJQ55_09590 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D GJQ55_09585 response regulator K10943 flrC; two-component system, response regulator FlrC
D GJQ55_09735 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D GJQ55_09640 flagellar biosynthesis protein FlaG K06603 flaG; flagellar protein FlaG
D GJQ55_09495 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D GJQ55_09490 P-loop NTPase K04562 flhG; flagellar biosynthesis protein FlhG
D GJQ55_12195 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D GJQ55_12190 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D GJQ55_12185 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D GJQ55_12180 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D GJQ55_12175 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D GJQ55_12170 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D GJQ55_02470 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D GJQ55_02475 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJQ55_00865 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D GJQ55_09860 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJQ55_00870 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJQ55_12165 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D GJQ55_12160 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D GJQ55_10630 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJQ55_10640 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GJQ55_10645 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GJQ55_10650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJQ55_03655 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D GJQ55_11855 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D GJQ55_11860 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D GJQ55_11865 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D GJQ55_11870 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D GJQ55_11875 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D GJQ55_06660 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D GJQ55_02445 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D GJQ55_02440 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D GJQ55_02460 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D GJQ55_02455 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D GJQ55_02435 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vcw04812]
D GJQ55_11245 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJQ55_10415 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJQ55_10420 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GJQ55_02145 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GJQ55_02140 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GJQ55_02135 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GJQ55_09450 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_12955 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_13155 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJQ55_13150 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vcw04147]
D GJQ55_08355 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GJQ55_11060 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJQ55_08295 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJQ55_11485 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJQ55_09160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GJQ55_10505 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D GJQ55_10275 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJQ55_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJQ55_01895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJQ55_05485 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GJQ55_01015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_01090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJQ55_11405 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GJQ55_06875 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_07785 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJQ55_08595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_00775 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_02615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_03375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GJQ55_12115 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GJQ55_10030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GJQ55_04675 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GJQ55_13070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJQ55_04785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJQ55_01560 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D GJQ55_02780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJQ55_09370 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GJQ55_00430 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJQ55_00655 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GJQ55_11890 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GJQ55_10710 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJQ55_05945 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJQ55_06810 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D GJQ55_08430 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJQ55_03260 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:vcw02048]
D GJQ55_05700 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GJQ55_07525 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GJQ55_05685 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GJQ55_07545 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GJQ55_05680 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GJQ55_07550 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GJQ55_11550 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D GJQ55_11555 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D GJQ55_04185 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D GJQ55_00165 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D GJQ55_00170 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D GJQ55_05500 Killer protein K07334 higB-1; toxin HigB-1
D GJQ55_05495 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
D GJQ55_10415 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJQ55_11245 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJQ55_12480 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJQ55_12465 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJQ55_06000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJQ55_10135 hypothetical protein K09159 cptB; antitoxin CptB
D GJQ55_03640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:vcw01504]
D GJQ55_09870 aadA1; ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47]
D GJQ55_12040 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D GJQ55_04405 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GJQ55_04400 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_04410 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GJQ55_04605 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJQ55_04600 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJQ55_07905 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJQ55_12440 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vcw03100]
D GJQ55_11955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_06005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_06015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJQ55_13200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_10935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_10940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_06180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJQ55_04260 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJQ55_08435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJQ55_08810 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_08820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_08830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJQ55_06460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GJQ55_03415 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJQ55_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_07295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_07305 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJQ55_01005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_06455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_07290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_07300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJQ55_06185 tRNA-His K14226 tRNA-His; tRNA His
D GJQ55_11960 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJQ55_00395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_08140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_03270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_06465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJQ55_08500 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJQ55_08505 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJQ55_04320 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_04325 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_04540 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_08205 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJQ55_11940 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GJQ55_13100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_05300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_06175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJQ55_10945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJQ55_05995 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJQ55_00540 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJQ55_01010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJQ55_01020 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GJQ55_01000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GJQ55_08805 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_05015 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_08815 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJQ55_11965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJQ55_09315 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJQ55_11950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJQ55_06995 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GJQ55_03490 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GJQ55_02065 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D GJQ55_12600 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D GJQ55_01410 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D GJQ55_05625 NAD(P)-binding protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D GJQ55_10855 2Fe-2S iron-sulfur cluster binding domain-containing protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D GJQ55_10860 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D GJQ55_06820 NAD(P)-binding protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D GJQ55_02935 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D GJQ55_09335 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D GJQ55_11365 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D GJQ55_11725 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D GJQ55_03065 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D GJQ55_03945 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D GJQ55_07330 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D GJQ55_10580 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D GJQ55_08720 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D GJQ55_09410 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GJQ55_11730 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D GJQ55_07475 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D GJQ55_09300 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GJQ55_11600 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GJQ55_04235 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GJQ55_04800 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GJQ55_04735 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D GJQ55_05165 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GJQ55_11030 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D GJQ55_02885 methyltransferase domain-containing protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D GJQ55_03230 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D GJQ55_10380 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D GJQ55_06360 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D GJQ55_07095 DUF3488 domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D GJQ55_06355 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D GJQ55_01735 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D GJQ55_02005 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D GJQ55_12300 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GJQ55_06275 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GJQ55_06525 ppsR; pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GJQ55_12045 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D GJQ55_11510 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D GJQ55_04045 hypothetical protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D GJQ55_09910 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GJQ55_09145 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D GJQ55_07240 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D GJQ55_00290 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D GJQ55_03385 HD domain-containing protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D GJQ55_00880 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D GJQ55_10210 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GJQ55_03955 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GJQ55_00105 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GJQ55_04570 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D GJQ55_12260 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D GJQ55_02550 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D GJQ55_08690 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GJQ55_12095 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GJQ55_07105 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GJQ55_01815 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GJQ55_02785 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D GJQ55_05575 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D GJQ55_05580 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D GJQ55_05585 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D GJQ55_08290 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D GJQ55_08285 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D GJQ55_08280 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D GJQ55_08275 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D GJQ55_08270 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D GJQ55_08265 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D GJQ55_07615 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D GJQ55_04475 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D GJQ55_01950 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D GJQ55_02230 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D GJQ55_02595 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D GJQ55_11010 DUF3470 domain-containing protein K05524 fdxA; ferredoxin
D GJQ55_09400 2Fe-2S ferredoxin-like protein K11107 yfaE; ferredoxin
D GJQ55_05570 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D GJQ55_05565 RnfABCDGE type electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D GJQ55_05590 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D GJQ55_05060 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein
D GJQ55_05055 hypothetical protein K02164 norE; nitric oxide reductase NorE protein
D GJQ55_05080 AAA domain-containing protein K04748 norQ; nitric oxide reductase NorQ protein
D GJQ55_06815 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D GJQ55_12800 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GJQ55_00560 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D GJQ55_00860 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D GJQ55_03995 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D GJQ55_04000 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D GJQ55_13040 heme biosynthesis protein HemY K02498 hemY; HemY protein
D GJQ55_00810 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D GJQ55_00815 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D GJQ55_12390 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D GJQ55_05025 sterol-binding protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
C 99988 Secondary metabolism
D GJQ55_06725 alpha/beta fold hydrolase K24084 aidA; quorum-quenching protein AidA
C 99999 Others
D GJQ55_06435 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GJQ55_03615 cold-shock protein K03704 cspA; cold shock protein
D GJQ55_03855 cold-shock protein K03704 cspA; cold shock protein
D GJQ55_05520 cold-shock protein K03704 cspA; cold shock protein
D GJQ55_06335 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D GJQ55_12940 sigma D regulator K07740 rsd; regulator of sigma D
D GJQ55_12380 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D GJQ55_12915 S1 RNA-binding domain-containing protein K06959 tex; protein Tex
C 99974 Translation
D GJQ55_00895 ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase
D GJQ55_03330 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D GJQ55_06340 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D GJQ55_06195 trigger factor K03545 tig; trigger factor
D GJQ55_03145 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GJQ55_00255 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D GJQ55_02105 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D GJQ55_02730 OsmC family protein K07397 yhfA; putative redox protein
D GJQ55_06825 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D GJQ55_10865 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D GJQ55_03355 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D GJQ55_07045 xni; flap endonuclease Xni K01146 xni; protein Xni
D GJQ55_12655 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GJQ55_10600 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GJQ55_03460 YraN family protein K07460 yraN; putative endonuclease
D GJQ55_02525 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D GJQ55_00115 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D GJQ55_06375 AAA family ATPase K07478 ycaJ; putative ATPase
D GJQ55_04155 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJQ55_04445 IS3 family transposase K07497 K07497; putative transposase
D GJQ55_06190 transposase K07497 K07497; putative transposase
D GJQ55_04340 DUF3596 domain-containing protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D GJQ55_06985 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GJQ55_03150 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GJQ55_10620 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GJQ55_12280 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GJQ55_04825 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D GJQ55_05230 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling
D GJQ55_02045 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D GJQ55_00200 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D GJQ55_10610 hypothetical protein K03807 ampE; AmpE protein
D GJQ55_07185 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D GJQ55_00425 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GJQ55_01435 CBS domain-containing protein K07168 K07168; CBS domain-containing membrane protein
D GJQ55_10365 AAA family ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GJQ55_09810 AAA family ATPase K07175 phoH2; PhoH-like ATPase
D GJQ55_09000 cyclic nucleotide-binding domain-containing protein K07182 K07182; CBS domain-containing protein
D GJQ55_09155 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D GJQ55_03005 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D GJQ55_06370 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D GJQ55_03425 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D GJQ55_06865 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D GJQ55_09240 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D GJQ55_11020 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D GJQ55_07765 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D GJQ55_00695 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D GJQ55_05375 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D GJQ55_01550 NfeD family protein K07340 ybbJ; inner membrane protein
D GJQ55_00890 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D GJQ55_11470 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D GJQ55_05325 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D GJQ55_00400 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D GJQ55_09050 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D GJQ55_09030 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D GJQ55_09035 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D GJQ55_00520 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GJQ55_09625 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D GJQ55_10775 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D GJQ55_03750 bacteriohemerythrin K07216 hr; hemerythrin
D GJQ55_00915 nosD; nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D GJQ55_12340 hypothetical protein K07231 K07231; putative iron-regulated protein
D GJQ55_04375 copper resistance protein CopB K07233 pcoB; copper resistance protein B
D GJQ55_05095 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D GJQ55_05160 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D GJQ55_00930 NosL protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GJQ55_07120 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D GJQ55_04910 hypothetical protein K03796 bax; Bax protein
D GJQ55_05660 globin K06886 glbN; hemoglobin
D GJQ55_08645 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D GJQ55_04280 alpha/beta hydrolase K07001 K07001; NTE family protein
D GJQ55_11985 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D GJQ55_04650 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D GJQ55_04640 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D GJQ55_04740 YihY family inner membrane protein K07058 K07058; membrane protein
D GJQ55_10285 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D GJQ55_11450 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D GJQ55_05550 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D GJQ55_06310 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D GJQ55_12550 LemA family protein K03744 lemA; LemA protein
D GJQ55_03610 SlyX protein K03745 slyX; SlyX protein
D GJQ55_10575 hypothetical protein K05805 creA; CreA protein
D GJQ55_07125 hypothetical protein K03749 dedD; DedD protein
D GJQ55_11840 AAA family ATPase K03112 damX; DamX protein
D GJQ55_11025 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D GJQ55_02310 zinc chelation protein SecC K09858 K09858; SEC-C motif domain protein
D GJQ55_03495 PhnA domain protein K06193 phnA; protein PhnA
C 99997 Function unknown
D GJQ55_05480 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D GJQ55_03850 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D GJQ55_07835 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D GJQ55_07860 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D GJQ55_02895 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D GJQ55_01395 peptidase K06973 K06973; uncharacterized protein
D GJQ55_09980 N-acetyltransferase K06975 K06975; uncharacterized protein
D GJQ55_10205 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D GJQ55_11070 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D GJQ55_06500 peptidase C39 K06992 K06992; uncharacterized protein
D GJQ55_12460 esterase K07000 K07000; uncharacterized protein
D GJQ55_08845 MMPL family transporter K07003 K07003; uncharacterized protein
D GJQ55_08190 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D GJQ55_08945 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D GJQ55_07665 UPF0149 family protein K07039 K07039; uncharacterized protein
D GJQ55_10290 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D GJQ55_13220 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D GJQ55_01685 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D GJQ55_00190 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D GJQ55_02945 TIGR01777 family protein K07071 K07071; uncharacterized protein
D GJQ55_09650 nucleotidyltransferase K07075 K07075; uncharacterized protein
D GJQ55_03130 FAD-dependent oxidoreductase K07077 K07077; uncharacterized protein
D GJQ55_07815 ATPase K07089 K07089; uncharacterized protein
D GJQ55_08630 TSUP family transporter K07090 K07090; uncharacterized protein
D GJQ55_12305 TSUP family transporter K07090 K07090; uncharacterized protein
D GJQ55_04240 TSUP family transporter K07090 K07090; uncharacterized protein
D GJQ55_05425 TSUP family transporter K07090 K07090; uncharacterized protein
D GJQ55_11590 TSUP family transporter K07090 K07090; uncharacterized protein
D GJQ55_12065 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D GJQ55_11690 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D GJQ55_11695 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D GJQ55_03465 ABC transporter substrate-binding protein K07121 K07121; uncharacterized protein
D GJQ55_11560 hypothetical protein K07137 K07137; uncharacterized protein
D GJQ55_05900 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D GJQ55_13255 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GJQ55_10835 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GJQ55_00845 YggU family protein K09131 K09131; uncharacterized protein
D GJQ55_02330 DUF493 family protein K09158 K09158; uncharacterized protein
D GJQ55_06965 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D GJQ55_02890 DUF1365 family protein K09701 K09701; uncharacterized protein
D GJQ55_09150 YciI family protein K09780 K09780; uncharacterized protein
D GJQ55_03710 DUF454 family protein K09790 K09790; uncharacterized protein
D GJQ55_06135 Trm112 family protein K09791 K09791; uncharacterized protein
D GJQ55_07625 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D GJQ55_02345 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D GJQ55_05725 DUF541 domain-containing protein K09797 K09797; uncharacterized protein
D GJQ55_02035 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D GJQ55_03160 RnfH family protein K09801 K09801; uncharacterized protein
D GJQ55_01645 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D GJQ55_06280 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D GJQ55_03595 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D GJQ55_00195 hypothetical protein K09859 K09859; uncharacterized protein
D GJQ55_05370 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D GJQ55_10660 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D GJQ55_00465 UPF0149 family protein K09895 K09895; uncharacterized protein
D GJQ55_09345 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D GJQ55_09180 YheU family protein K09898 K09898; uncharacterized protein
D GJQ55_06970 hypothetical protein K09902 K09902; uncharacterized protein
D GJQ55_04765 hypothetical protein K09910 K09910; uncharacterized protein
D GJQ55_05330 DUF2058 family protein K09912 K09912; uncharacterized protein
D GJQ55_08870 DUF1315 family protein K09916 K09916; uncharacterized protein
D GJQ55_07425 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D GJQ55_12450 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D GJQ55_12510 DUF484 family protein K09921 K09921; uncharacterized protein
D GJQ55_08960 hypothetical protein K09922 K09922; uncharacterized protein
D GJQ55_07610 hypothetical protein K09926 K09926; uncharacterized protein
D GJQ55_06105 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D GJQ55_01860 DUF2065 family protein K09937 K09937; uncharacterized protein
D GJQ55_04995 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D GJQ55_07570 hypothetical protein K09939 K09939; uncharacterized protein
D GJQ55_00605 DUF1415 family protein K09941 K09941; uncharacterized protein
D GJQ55_03735 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D GJQ55_09970 hypothetical protein K09954 K09954; uncharacterized protein
D GJQ55_12545 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein
D GJQ55_06475 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D GJQ55_06940 VWA domain-containing protein K09989 K09989; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 17, 2024