+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Varroa destructor (honeybee mite)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 111243984 mRNA cap guanine-N7 methyltransferase-like isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111250669 mRNA-capping enzyme-like K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 111245941 cyclin-dependent kinase 7-like isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111250964 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like isoform X1 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
D Cap binding complex
E 111251110 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111245019 nuclear cap-binding protein subunit 2-like isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 111250633 cleavage and polyadenylation specificity factor subunit 5-like isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111246734 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 111248739 polyribonucleotide 5'-hydroxyl-kinase Clp1-like K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 111245872 pre-mRNA cleavage complex 2 protein Pcf11-like isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111250810 pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 111251988 cleavage and polyadenylation specificity factor subunit 1-like isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 111245989 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111250612 cleavage and polyadenylation specificity factor 73-like isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111247198 cleavage and polyadenylation specificity factor subunit 4-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111252081 pre-mRNA 3'-end-processing factor FIP1-like K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 111243694 dentin sialophosphoprotein-like K15542 PFS2; polyadenylation factor subunit 2
E 111244703 pre-mRNA 3' end processing protein WDR33-like K15542 PFS2; polyadenylation factor subunit 2
E 111248531 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 111243936 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111251836 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111252189 serine/threonine-protein phosphatase alpha-3 isoform-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111252351 serine/threonine-protein phosphatase alpha-2 isoform isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111245398 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111248130 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111248200 serine/threonine-protein phosphatase PP1 isozyme 1-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111248437 serine/threonine-protein phosphatase PP1-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111249556 serine/threonine-protein phosphatase PP1-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111249689 serine/threonine-protein phosphatase alpha-2 isoform-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111250752 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111245069 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like isoform X1 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 111246644 cleavage stimulation factor subunit 1-like isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 111247669 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 111248901 cleavage stimulation factor subunit 3-like K14408 CSTF3; cleavage stimulation factor subunit 3
E 111244200 symplekin-like K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 111247841 small nuclear ribonucleoprotein Sm D3-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111253647 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111247814 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111247222 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 111249535 U7 snRNA-associated Sm-like protein LSm11 isoform X1 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 111245989 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111250612 cleavage and polyadenylation specificity factor 73-like isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111247669 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 111244200 symplekin-like K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 111253196 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 111247012 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 111245230 transcription elongation factor SPT5-like K15172 SUPT5H; transcription elongation factor SPT5
E 111245395 transcription elongation factor SPT5-like K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 111247420 N6-adenosine-methyltransferase 70 kDa subunit-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111246893 methyltransferase-like protein 14 homolog isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111255356 methyltransferase-like protein 4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 111252059 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase-like isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 111252412 pre-mRNA-splicing regulator WTAP-like isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111250429 protein virilizer-like isoform X1 K22910 VIRMA; protein virilizer
E 111247458 putative RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 111247663 dentin sialophosphoprotein-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111250420 E3 ubiquitin-protein ligase Hakai-like isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 111251710 poly(A) polymerase type 3-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111245742 poly(A) polymerase type 3-like isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111253499 poly(A) RNA polymerase gld-2 homolog A-like isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 111252775 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 111252877 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 111249639 DNA/RNA-binding protein KIN17-like K13102 KIN; DNA/RNA-binding protein KIN17
D 111245086 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 111245915 protein FAM46C-like isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 111246760 zinc finger CCCH domain-containing protein 14-like isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 111246629 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 111254080 RNA-binding protein 8A-like K12876 RBM8A; RNA-binding protein 8A
E 111249040 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111245901 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 111243436 spliceosome RNA helicase DDX39B-like K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111245239 eukaryotic initiation factor 4A-III isoform X1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111247776 coiled-coil domain-containing protein 174-like isoform X1 K25178 CCDC174; coiled-coil domain-containing protein 174
E 111248626 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 111254021 pinin-like K13114 PNN; pinin
E 111252813 apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111244286 RNA-binding protein with serine-rich domain 1-B-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111247534 serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 111246669 THO complex subunit 1-like K12878 THOC1; THO complex subunit 1
E 111243519 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 111251920 THO complex subunit 3-like isoform X1 K12880 THOC3; THO complex subunit 3
E 111245901 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 111248030 THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 111244801 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 111254388 THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 111244419 PCI domain-containing protein 2-like isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 111251004 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111244983 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 111247092 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 111252624 caltractin-like K10840 CETN2; centrin-2
E 111254376 uncharacterized protein LOC111254376 isoform X1 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 111246248 nucleoprotein TPR-like K09291 TPR; nucleoprotein TPR
E 111245832 mRNA export factor-like K14298 RAE1; mRNA export factor
E 111251525 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 111244114 protein transport protein SEC13-like isoform X1 K14004 SEC13; protein transport protein SEC13
E 111245895 nuclear pore complex protein Nup85-like isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 111247488 nucleoporin Nup43-like K14305 NUP43; nuclear pore complex protein Nup43
E 111246467 nuclear pore complex protein Nup50-like isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 111244777 nucleoporin p54-like isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 111244342 nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 111244367 nuclear pore complex protein Nup88-like isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 111244744 nuclear pore complex protein Nup93-like isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 111253563 nuclear pore complex protein Nup93-like isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 111250949 nuclear pore complex protein Nup98-Nup96-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111254551 nuclear pore complex protein Nup107-like K14301 NUP107; nuclear pore complex protein Nup107
E 111249042 nuclear pore complex protein Nup107-like K14301 NUP107; nuclear pore complex protein Nup107
E 111251778 nuclear pore complex protein Nup133-like isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 111250334 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 111249341 nuclear pore complex protein Nup155-like K14312 NUP155; nuclear pore complex protein Nup155
E 111245408 nuclear pore complex protein Nup160-like K14303 NUP160; nuclear pore complex protein Nup160
E 111254426 nuclear pore complex protein Nup205-like isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 111247335 nuclear pore complex protein DDB_G0274915-like isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 111245185 nuclear pore complex protein DDB_G0274915-like K14307 NUPL1; nucleoporin p58/p45
E 111254719 nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 111251089 nucleoporin SEH1-like K14299 SEH1; nucleoporin SEH1
E 111254948 uncharacterized protein LOC111254948 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 111245553 aladin-like K14320 AAAS; aladin
E 111244408 nucleoporin GLE1-like K18723 GLE1; nucleoporin GLE1
E 111250278 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
E 111254370 NTF2-related export protein 1-like K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 111243376 GTP-binding nuclear protein Ran-like K07936 RAN; GTP-binding nuclear protein Ran
E 111244680 GTP-binding nuclear protein Ran-like isoform X1 K07936 RAN; GTP-binding nuclear protein Ran
E 111248419 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 111252239 acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 111248784 ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 111250370 ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 111246222 FAS-associated factor 2-like K18726 FAF2; FAS-associated factor 2
E 111249077 transitional endoplasmic reticulum ATPase-like isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 111253688 protein-lysine methyltransferase METTL21D-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111246156 exportin-1-like K14290 XPO1; exportin-1
E 111252965 exportin-7-like K18460 XPO7; exportin-7
E 111245606 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 111243444 eukaryotic translation initiation factor 4E-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 111252838 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 111244838 uncharacterized protein LOC111244838 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 111252843 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111250374 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111253471 eukaryotic initiation factor 4A-I-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 111247641 eukaryotic initiation factor 4A-I-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 111252325 eukaryotic translation initiation factor 4 gamma 1-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111248777 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 111247109 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 111251476 eukaryotic translation initiation factor 4H-like K24086 EIF4H; translation initiation factor 4H
E 111253347 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H
E 111248247 eukaryotic translation initiation factor 4E-binding protein 3-like K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 111252132 trithorax group protein osa-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 111247507 protein angel homolog 2-like K18729 ANGEL; protein angel
E 111244921 cytoplasmic FMR1-interacting protein-like isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111253399 uncharacterized protein LOC111253399 isoform X1 K13133 GEMIN5; gem associated protein 5
E 111244911 uncharacterized protein LOC111244911 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111252860 uncharacterized protein LOC111252860 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111253166 cytoplasmic polyadenylation element-binding protein 3-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111245359 uncharacterized protein LOC111245359 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111254283 uncharacterized protein LOC111254283 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111255003 translational regulator orb2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111250054 uncharacterized protein LOC111250054 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111245466 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111245862 GIGYF family protein CG11148-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111253741 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 111243635 uncharacterized protein LOC111243635 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 111247056 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111247199 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 111247961 density-regulated protein homolog isoform X1 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 111255279 partner of Y14 and mago-like isoform X1 K14294 WIBG; partner of Y14 and mago
E 111243505 heterogeneous nuclear ribonucleoprotein A/B-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111243787 uncharacterized protein LOC111243787 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111253425 RNA-binding protein Musashi homolog Rbp6-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111253663 heterogeneous nuclear ribonucleoprotein 27C-like K14411 MSI; RNA-binding protein Musashi
E 111249107 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 111255327 protein pelota-like K06965 PELO; protein pelota
E 111243299 polyadenylate-binding protein 2-B-like K14396 PABPN1; polyadenylate-binding protein 2
E 111244273 DEAD-box helicase Dbp80-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 111248762 DEAD-box helicase Dbp80-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 111253011 pre-mRNA-splicing factor SYF1-like isoform X1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 111252445 SAP domain-containing ribonucleoprotein-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111249983 regulator of chromosome condensation-like K11493 RCC1; regulator of chromosome condensation
E 111245737 la-related protein 6-like K18733 LARP6; la-related protein 6
E 111254867 uncharacterized protein LOC111254867 isoform X1 K18733 LARP6; la-related protein 6
E 111248980 transcriptional activator protein Pur-beta-like isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 111252788 leukocyte receptor cluster member 8 homolog K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 111254103 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 111247316 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 111250092 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111244248 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111246477 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 111243828 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111251221 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111243973 uncharacterized protein LOC111243973 isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111247322 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111251396 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111247278 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111248479 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111244972 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 111250839 serine/threonine-protein kinase SMG1-like isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111246041 protein SMG5-like K11125 SMG5; protein SMG5
E 111254553 uncharacterized protein LOC111254553 isoform X1 K11125 SMG5; protein SMG5
E 111248373 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 111248792 uncharacterized protein LOC111248792 K14409 SMG7; protein SMG7
E 111252821 protein SMG8-like isoform X1 K18734 SMG8; protein SMG8
E 111249744 protein SMG9-like K18735 SMG9; protein SMG9
E 111245862 GIGYF family protein CG11148-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111242958 uncharacterized protein LOC111242958 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 111248654 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 111253497 GTP-binding protein 1-like isoform X1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 111243095 pumilio homolog 3-like K14844 PUF6; pumilio homology domain family member 6
E 111251598 unconventional myosin-Va-like K10357 MYO5; myosin V
E 111248882 protein bicaudal D-like isoform X1 K18739 BICD; protein bicaudal D
E 111245899 uncharacterized protein LOC111245899 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 111243218 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 111246368 actin, clone 403-like K05692 ACTB_G1; actin beta/gamma 1
E 111246370 actin, clone 403-like K05692 ACTB_G1; actin beta/gamma 1
E 111246371 actin, clone 403-like K05692 ACTB_G1; actin beta/gamma 1
E 111248271 actin, clone 403-like K05692 ACTB_G1; actin beta/gamma 1
E 111248580 actin, cytoplasmic 3-like K05692 ACTB_G1; actin beta/gamma 1
E 111253322 uncharacterized protein LOC111253322 K18741 NANOS1; protein nanos 1
E 111247348 uncharacterized protein LOC111247348 K18741 NANOS1; protein nanos 1
E 111247792 homeobox protein 5-like isoform X1 K18741 NANOS1; protein nanos 1
E 111250928 uncharacterized protein LOC111250928 isoform X1 K18741 NANOS1; protein nanos 1
E 111252625 protein deadpan-like K09090 HESN; hairy and enhancer of split, invertebrate
D Trans-acting binding proteins
E 111243492 far upstream element-binding protein 3-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 111252308 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 111248738 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 111250236 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111252078 heterogeneous nuclear ribonucleoproteins A1 homolog K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 111250366 arf-GAP domain and FG repeat-containing protein 1-like isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 111244293 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 111248816 polypyrimidine tract-binding protein 3-like isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 111243437 RNA-binding protein squid-like K03102 SQD; squid
E 111246352 RNA-binding protein squid-like isoform X1 K03102 SQD; squid
E 111244911 uncharacterized protein LOC111244911 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111252860 uncharacterized protein LOC111252860 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111253166 cytoplasmic polyadenylation element-binding protein 3-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111245359 uncharacterized protein LOC111245359 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111254283 uncharacterized protein LOC111254283 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111255003 translational regulator orb2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111250054 uncharacterized protein LOC111250054 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 111244921 cytoplasmic FMR1-interacting protein-like isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111252786 poly(rC)-binding protein 3-like isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 111255076 caprin homolog isoform X1 K18743 CAPRIN1; caprin-1
E 111252392 glycine-rich protein 2-like isoform X1 K09276 YBX1; Y-box-binding protein 1
E 111252752 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 111252019 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 111243938 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111252134 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111245813 protein argonaute-4-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111254624 protein argonaute-3-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111255253 protein argonaute 12-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111255312 protein argonaute 12-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111247833 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111248399 protein argonaute-4-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111243444 eukaryotic translation initiation factor 4E-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 111252838 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 111244838 uncharacterized protein LOC111244838 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 111252843 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111250374 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111250092 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111245466 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111247330 putative ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111248346 probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111254061 RNA-binding protein MEX3B-like isoform X1 K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 111243780 protein LSM14 homolog B-B-like isoform X1 K18749 LSM14; protein LSM14
E 111245272 protein LSM14 homolog B-A-like K18749 LSM14; protein LSM14
E 111253423 protein LSM14 homolog A-like K18749 LSM14; protein LSM14
E 111247537 protein LSM14 homolog A-like K18749 LSM14; protein LSM14
E 111252786 poly(rC)-binding protein 3-like isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 111252392 glycine-rich protein 2-like isoform X1 K09276 YBX1; Y-box-binding protein 1
E 111252752 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 111253547 Wilms tumor protein 1-interacting protein-like K16682 AJUBA; LIM domain-containing protein
E 111246722 putative helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111250074 putative helicase mov-10-B.1 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111244805 transportin-1-like K18752 TNPO1; transportin-1
E 111250839 serine/threonine-protein kinase SMG1-like isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111246041 protein SMG5-like K11125 SMG5; protein SMG5
E 111254553 uncharacterized protein LOC111254553 isoform X1 K11125 SMG5; protein SMG5
E 111248373 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 111248792 uncharacterized protein LOC111248792 K14409 SMG7; protein SMG7
E 111245068 mRNA decay activator protein ZFP36L2-like K18753 ZFP36L; butyrate response factor
E 111254151 mRNA decay activator protein ZFP36L2-A-like K18753 ZFP36L; butyrate response factor
E 111246652 protein TIS11-like isoform X1 K18753 ZFP36L; butyrate response factor
E 111242820 mRNA decay activator protein ZFP36L3-like K18753 ZFP36L; butyrate response factor
E 111247881 protein lin-28 homolog A-like isoform X1 K18754 LIN28; protein lin-28
E 111253839 huntingtin-like isoform X1 K04533 HD; huntingtin
E 111245042 uncharacterized protein LOC111245042 isoform X1 K18756 BICC1; protein bicaudal C
E 111245043 uncharacterized protein LOC111245043 isoform X1 K18756 BICC1; protein bicaudal C
E 111245109 uncharacterized protein LOC111245109 isoform X1 K18756 BICC1; protein bicaudal C
E 111249807 uncharacterized protein LOC111249807 isoform X1 K18756 BICC1; protein bicaudal C
E 111249808 uncharacterized protein LOC111249808 K18756 BICC1; protein bicaudal C
E 111251746 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111243861 cAMP-dependent protein kinase catalytic subunit alpha-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111254502 cAMP-dependent protein kinase catalytic subunit gamma-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111251053 cAMP-dependent protein kinase catalytic subunit gamma-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111251096 cAMP-dependent protein kinase catalytic subunit gamma-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111251139 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111251176 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111243232 la-related protein 1-like isoform X1 K18757 LARP1; la-related protein 1
E 111252476 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 111248845 uncharacterized protein LOC111248845 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111252701 mRNA-decapping enzyme 1A-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111254947 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111255556 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111244388 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111254187 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111253995 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111252297 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111253237 kinesin light chain-like isoform X1 K10407 KLC; kinesin light chain
E 111251598 unconventional myosin-Va-like K10357 MYO5; myosin V
E 111251545 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 111253874 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 111254752 tubulin alpha-1D chain K07374 TUBA; tubulin alpha
E 111254898 tubulin alpha-1A chain-like isoform X1 K07374 TUBA; tubulin alpha
E 111248922 tubulin alpha-8 chain-like isoform X1 K07374 TUBA; tubulin alpha
E 111250812 tubulin alpha-2 chain-like K07374 TUBA; tubulin alpha
E 111244911 uncharacterized protein LOC111244911 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111252860 uncharacterized protein LOC111252860 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111253166 cytoplasmic polyadenylation element-binding protein 3-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111245359 uncharacterized protein LOC111245359 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111254283 uncharacterized protein LOC111254283 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111255003 translational regulator orb2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111250054 uncharacterized protein LOC111250054 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111253399 uncharacterized protein LOC111253399 isoform X1 K13133 GEMIN5; gem associated protein 5
E 111253051 protein Gawky-like isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 111246658 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111247220 CCR4-NOT transcription complex subunit 2-like isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111250441 CCR4-NOT transcription complex subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111253721 trithorax group protein osa-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111255195 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111246479 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111244218 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111250110 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 111243896 PAN2-PAN3 deadenylation complex subunit PAN3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 111246252 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 111255579 protein Tob1-like isoform X1 K14443 TOB; protein Tob/BTG
E 111252132 trithorax group protein osa-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 111255299 uncharacterized protein LOC111255299 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111250864 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 111251693 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111244248 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111246477 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
E 111251908 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111246910 RING finger protein nhl-1-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111249818 DNA-directed RNA polymerase II subunit RPB7-like isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
D Stress granule specific factors
E 111251532 nucleolysin TIAR-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111254142 nucleolysin TIAR-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111253741 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 111244293 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 111248784 ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 111255074 ras GTPase-activating protein-binding protein 2-like K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 111248426 eukaryotic translation initiation factor 2A-like isoform X1 K15026 EIF2A; translation initiation factor 2A
E 111253222 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 111253471 eukaryotic initiation factor 4A-I-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 111247641 eukaryotic initiation factor 4A-I-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 111245239 eukaryotic initiation factor 4A-III isoform X1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111247109 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 111252325 eukaryotic translation initiation factor 4 gamma 1-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111248777 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 111248053 ribosomal protein S6 kinase 2 beta-like isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 111245931 guanine nucleotide-binding protein subunit beta-2-like 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111252987 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111250278 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
E 111252265 tudor domain-containing protein 3-like K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 111252701 mRNA-decapping enzyme 1A-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111248845 uncharacterized protein LOC111248845 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111247330 putative ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111248346 probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111250864 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 111251693 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111255299 uncharacterized protein LOC111255299 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 111254947 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111255556 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111244388 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111254187 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111253995 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111252297 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D 5' exonucleases
E 111252019 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 111254138 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D Other 5'-3' decay factors
E 111244496 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
C 3'-5' decay
D Core exosome factors
E 111249628 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
E 111250164 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 111251391 exosome complex component RRP40-like K03681 RRP40; exosome complex component RRP40
E 111250745 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 111246012 exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3
E 111249823 exosome complex exonuclease RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42
E 111251130 exosome complex component RRP43-like isoform X1 K12586 RRP43; exosome complex component RRP43
E 111248844 exosome complex component RRP45-like isoform X1 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 111253868 exosome complex exonuclease RRP44-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111243913 exosome component 10-like K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111245207 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 111251163 M-phase phosphoprotein 6-like K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 111253040 non-canonical poly(A) RNA polymerase PAPD5-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111246158 non-canonical poly(A) RNA polymerase PAPD5-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111242797 non-canonical poly(A) RNA polymerase protein Trf4-1-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111253181 uncharacterized protein LOC111253181 isoform X1 K12597 AIR1_2; protein AIR1/2
E 111249840 superkiller viralicidic activity 2-like 2 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 111247056 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111251394 tetratricopeptide repeat protein 37-like isoform X1 K12600 SKI3; superkiller protein 3
E 111248928 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 111255195 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111246658 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111247220 CCR4-NOT transcription complex subunit 2-like isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111250441 CCR4-NOT transcription complex subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111253721 trithorax group protein osa-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111246479 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111244187 CCR4-NOT transcription complex subunit 9-like isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111251487 CCR4-NOT transcription complex subunit 10-like isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 111250110 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 111243896 PAN2-PAN3 deadenylation complex subunit PAN3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 111246252 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 111252669 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111252341 ATP-dependent RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111255579 protein Tob1-like isoform X1 K14443 TOB; protein Tob/BTG
E 111248629 nocturnin-like isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 111244496 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 111255235 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 111245044 protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 111248636 protein Smaug homolog 2-like K27396 SMG; protein Smaug
E 111254977 uncharacterized protein LOC111254977 isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 111244038 uncharacterized protein LOC111244038 isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 111254449 ribonuclease 3-like isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 111246480 oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 111253530 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111251753 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 111243721 ATP-dependent 6-phosphofructokinase-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 111244106 stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 111251604 60 kDa heat shock protein, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 111250164 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 111249628 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
D Cofactors
E 111250745 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 111249823 exosome complex exonuclease RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024