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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Varroa destructor (honeybee mite)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        111245786 DNA-directed RNA polymerase II subunit RPB1-like isoform X1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        111251866 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        111248343 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
D      Pol II specific subunits
E        111251448 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        111249818 DNA-directed RNA polymerase II subunit RPB7-like isoform X1	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        111242935 DNA-directed RNA polymerase II subunit RPB9-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        111245903 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        111248899 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        111244117 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        111252961 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        111245879 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        111247987 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        111243443 transcription initiation factor IIB-like isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
E        111245350 uncharacterized protein LOC111245350 isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        111247015 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111255203 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111254717 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        111254991 transcription initiation factor TFIID subunit 2-like isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        111251677 transcription initiation factor TFIID subunit 3-like isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        111244155 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        111253988 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        111249449 transcription initiation factor TFIID subunit 5-like isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        111244887 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        111253698 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        111251040 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        111250792 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        111249854 transcription initiation factor TFIID subunit 9B-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        111245702 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        111254443 transcription initiation factor TFIID subunit 11-like isoform X1	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        111243247 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        111254165 general transcription factor IIE subunit 1-like isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        111253963 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        111255345 general transcription factor IIF subunit 1-like isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        111244101 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        111245203 general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        111245370 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        111254349 uncharacterized protein LOC111254349	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        111253841 general transcription factor IIH subunit 4-like isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        111250740 DNA excision repair protein haywire-like isoform X1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        111247020 TFIIH basal transcription factor complex helicase XPD subunit-like	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        111245941 cyclin-dependent kinase 7-like isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        111250808 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        111246573 cyclin-H-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        111254706 mediator of RNA polymerase II transcription subunit 6-like isoform X1	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        111243687 mediator of RNA polymerase II transcription subunit 8-like	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        111245887 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        111250783 mediator of RNA polymerase II transcription subunit 18-like isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        111246897 mediator of RNA polymerase II transcription subunit 19-like isoform X1	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        111244076 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        111246357 mediator of RNA polymerase II transcription subunit 22-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        111253791 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        111250376 mediator of RNA polymerase II transcription subunit 30-like isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        111255451 mediator of RNA polymerase II transcription subunit 1-like isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        111247129 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        111249455 mediator of RNA polymerase II transcription subunit 7-like isoform X1	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        111251697 mediator of RNA polymerase II transcription subunit 9-like isoform X1	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        111244947 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        111248354 mediator of RNA polymerase II transcription subunit 21-like isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        111249158 mediator of RNA polymerase II transcription subunit 31-A-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        111245002 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        111245179 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        111252532 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        111253489 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        111251785 mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        111255442 cyclin-dependent kinase 8-like isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        111253939 cyclin-C-like isoform X1	K15161 CCNC; cyclin-C 
E        111248196 mediator of RNA polymerase II transcription subunit 12-like protein isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        111252381 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        111249528 mediator of RNA polymerase II transcription subunit 23-like isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        111245357 mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        111245894 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        111246024 mucin-19-like isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        111254379 mediator of RNA polymerase II transcription subunit 27-like isoform X1	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        111252923 histone acetyltransferase KAT2A-like isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        111243417 transformation/transcription domain-associated protein-like isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        111255409 SAGA complex subunit spt3-like isoform X1	K11313 SUPT3H; transcription initiation protein SPT3 
E        111245490 transcriptional adapter 2-alpha-like	K11314 TADA2A; transcriptional adapter 2-alpha 
E        111244642 transcriptional adapter 2-beta-like isoform X1	K15127 TADA2B; transcriptional adapter 2-beta 
E        111247329 transcriptional adapter 3-like isoform X1	K11315 TADA3; transcriptional adapter 3 
E        111247909 transcriptional adapter 3-like isoform X1	K11315 TADA3; transcriptional adapter 3 
E        111252354 uncharacterized protein LOC111252354 isoform X1	K11317 TADA1; transcriptional adapter 1 
E        111254991 transcription initiation factor TFIID subunit 2-like isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        111244155 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        111253988 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        111249449 transcription initiation factor TFIID subunit 5-like isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        111244887 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        111253698 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        111251040 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        111249854 transcription initiation factor TFIID subunit 9B-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        111245702 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        111248389 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        111251558 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        111254742 uncharacterized protein LOC111254742	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        111248219 ataxin-7-like protein 1 isoform X1	K11318 ATXN7; ataxin-7 
E        111254660 chromodomain-helicase-DNA-binding protein 1-like isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        111244983 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        111247092 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        111252998 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        111250468 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        111245876 probable global transcription activator SNF2L2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        111247221 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        111246196 SWI/SNF complex subunit SMARCC2-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        111249953 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        111255137 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        111243218 actin-5C	K05692 ACTB_G1; actin beta/gamma 1 
E        111246368 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111246370 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111246371 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111248271 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111248580 actin, cytoplasmic 3-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111250373 actin-like protein 6B isoform X1	K11652 ACTL6B; actin-like protein 6B 
E        111248433 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        111244477 AT-rich interactive domain-containing protein 2-like isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        111253900 protein polybromo-1-like isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        111247221 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        111245113 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
C    Other transcription-related factors
D      Transcription elongation factors
E        111246319 transcription elongation factor S-II-like isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        111253196 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        111247012 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        111245230 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        111245395 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        111252370 transcription elongation factor SPT6-like isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        111245872 pre-mRNA cleavage complex 2 protein Pcf11-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        111250810 pre-mRNA cleavage complex 2 protein Pcf11-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        111251988 cleavage and polyadenylation specificity factor subunit 1-like isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        111250612 cleavage and polyadenylation specificity factor 73-like isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        111247198 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        111243936 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111251836 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111252189 serine/threonine-protein phosphatase alpha-3 isoform-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111252351 serine/threonine-protein phosphatase alpha-2 isoform isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111245398 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111248130 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111248200 serine/threonine-protein phosphatase PP1 isozyme 1-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111248437 serine/threonine-protein phosphatase PP1-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111249556 serine/threonine-protein phosphatase PP1-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111249689 serine/threonine-protein phosphatase alpha-2 isoform-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111250752 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111244200 symplekin-like	K06100 SYMPK; symplekin 
E        111245069 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        111254138 5'-3' exoribonuclease 2 homolog isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        111245062 decapping and exoribonuclease protein-like isoform X1	K14845 RAI1; RAT1-interacting protein 
E        111253889 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        111251894 non-POU domain-containing octamer-binding protein-like isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        111250138 paraspeckle component 1-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        111246390 protein SCAF8-like isoform X1	K13191 RBM16; RNA-binding protein 16 
E        111246638 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        111245585 RNA polymerase II-associated factor 1 homolog isoform X1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        111247444 parafibromin-like	K15175 CDC73; parafibromin 
E        111247528 parafibromin-like	K15175 CDC73; parafibromin 
E        111245195 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        111246964 another transcription unit protein-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        111249571 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        111255085 negative elongation factor A-like isoform X1	K15179 WHSC2; negative elongation factor A 
E        111255070 negative elongation factor B-like isoform X1	K15180 COBRA1; negative elongation factor B 
E        111254833 negative elongation factor D-like isoform X1	K15181 TH1L; negative elongation factor C/D 
E        111250382 negative elongation factor E-like	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        111250960 RNA polymerase II elongation factor Ell-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        111254937 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        111247383 protein ENL-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        111254198 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        111243435 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        111250960 RNA polymerase II elongation factor Ell-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        111254198 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        111243435 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        111254503 protein HEXIM1-like isoform X1	K15189 HEXIM1_2; protein HEXIM1/2 
E        111255099 suppressor protein SRP40-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        111248863 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        111247674 la-related protein 7-like isoform X1	K15191 LARP7; La-related protein 7 
E        111254198 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        111243435 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        111243979 TATA-binding protein-associated factor 172-like isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        111248340 protein Dr1-like isoform X1	K21751 DR1; down-regulator of transcription 1 
E        111248860 dr1-associated corepressor homolog	K21752 DRAP1; Dr1-associated corepressor 
E        111252651 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        111251235 RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        111245529 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        111245530 CTD small phosphatase-like protein 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        111254931 probable C-terminal domain small phosphatase isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        111243840 IWS1-like protein	K17498 SPN1; transcription factor SPN1 
E        111252952 uncharacterized protein LOC111252952 isoform X1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        111252953 cysteine/serine-rich nuclear protein 2-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        111252224 RNA polymerase II-associated protein 1-like isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        111245048 uncharacterized protein LOC111245048	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        111244669 RNA polymerase II-associated protein 3-like	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        111251775 cyclin-K-like	K23326 CCNK; cyclin K 
E        111245652 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        111250026 GPN-loop GTPase 3-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        111250984 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        111250365 DNA-directed RNA polymerase III subunit RPC1-like isoform X1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        111245201 DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        111245811 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        111248111 DNA-directed RNA polymerases I and III subunit RPAC2-like isoform X1	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        111245770 uncharacterized protein LOC111245770	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        111255390 uncharacterized protein LOC111255390	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        111243957 DNA-directed RNA polymerase III subunit RPC6-like isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        111246847 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        111250767 DNA-directed RNA polymerase III subunit RPC8-like isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
D      Pol I, II, III common subunits
E        111245903 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        111248899 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        111244117 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      TFIIIA
E        111245559 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        111247015 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111255203 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111244445 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        111248632 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        111249740 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        111245685 general transcription factor 3C polypeptide 1-like	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        111253666 uncharacterized protein LOC111253666 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        111254788 general transcription factor 3C polypeptide 3-like isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        111253061 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        111253061 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        111254788 general transcription factor 3C polypeptide 3-like isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        111250342 uncharacterized protein LOC111250342 isoform X1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        111250827 snRNA-activating protein complex subunit 3-like isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        111252936 POU domain protein 2-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        111243413 zinc finger protein 143-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        111252369 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        111249495 DNA-directed RNA polymerase I subunit RPA1-like isoform X1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        111251057 DNA-directed RNA polymerase I subunit RPA2-like isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        111245811 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        111248111 DNA-directed RNA polymerases I and III subunit RPAC2-like isoform X1	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        111248032 uncharacterized protein LOC111248032	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        111254670 uncharacterized protein LOC111254670 isoform X1	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        111253695 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        111245903 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        111248899 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        111244117 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      SL1/TIF-1B
E        111247015 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111255203 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        111250674 uncharacterized protein LOC111250674 isoform X1	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
C    Other transcription-related factors
D      UBF
E        111245679 nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        111249886 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        111250874 upstream activation factor subunit spp27-like	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        111253196 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        111247012 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        111245230 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        111245395 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        111244877 chromatin-remodeling complex ATPase chain Iswi-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
E        111253732 LOW QUALITY PROTEIN: nucleolar and coiled-body phosphoprotein 1-like	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        111243443 transcription initiation factor IIB-like isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
E        111245350 uncharacterized protein LOC111245350 isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        111254165 general transcription factor IIE subunit 1-like isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
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#Last updated: April 9, 2024