+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Vibrio gazogenes</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
C    BSQ33_08500 CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1 
C    BSQ33_17910 subtype I-E CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1 
C    BSQ33_08495 CRISPR-associated endonuclease Cas2	K09951 cas2; CRISPR-associated protein Cas2 
C    BSQ33_17905 type I-E CRISPR-associated endoribonuclease Cas2	K09951 cas2; CRISPR-associated protein Cas2 
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
D      BSQ33_17940 CRISPR-associated helicase/endonuclease Cas3	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] 
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
D      BSQ33_17935 type I-E CRISPR-associated protein Cse1/CasA	K19123 casA; CRISPR system Cascade subunit CasA 
D      BSQ33_17930 type I-E CRISPR-associated protein Cse2/CasB	K19046 casB; CRISPR system Cascade subunit CasB 
D      BSQ33_17925 type I-E CRISPR-associated protein Cas7/Cse4/CasC	K19124 casC; CRISPR system Cascade subunit CasC 
D      BSQ33_17920 type I-E CRISPR-associated protein Cas5/CasD	K19125 casD; CRISPR system Cascade subunit CasD 
D      BSQ33_17915 type I-E CRISPR-associated protein Cas6/Cse3/CasE	K19126 casE; CRISPR system Cascade subunit CasE 
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
D      BSQ33_08520 type III-B CRISPR-associated protein Cas10/Cmr2	K19076 cmr2; CRISPR-associated protein Cmr2 
D      BSQ33_08525 hypothetical protein	K09127 cmr3; CRISPR-associated protein Cmr3 
D      BSQ33_08530 type III-B CRISPR module RAMP protein Cmr4	K09000 cmr4; CRISPR-associated protein Cmr4 
D      BSQ33_08540 type III-B CRISPR module RAMP protein Cmr6	K19142 cmr6; CRISPR-associated protein Cmr6 
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    BSQ33_06940 restriction endonuclease subunit R	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    BSQ33_06950 hypothetical protein	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    BSQ33_06955 restriction endonuclease subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      BSQ33_10360 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      BSQ33_19795 DNA methylase N-4	K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] 
B  Type III R-M system
B  Type IV R-M system
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
C    YafQ-dinJ
C    YoeB-YefM
D      BSQ33_18575 addiction module protein	K19158 yoeB; toxin YoeB [EC:3.1.-.-] 
D      BSQ33_18580 prevent-host-death protein	K19159 yefM; antitoxin YefM 
C    HipA-HipB
C    HicA-HicB
C    YafO-YafN
C    PspC-PspB
D      BSQ33_00225 phage shock protein C	K03973 pspC; phage shock protein C 
D      BSQ33_00220 phage shock protein B	K03970 pspB; phage shock protein B 
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    SpoIISA-SpoIISB
C    Tse6-Tsi6
C    Type II TA system related factors
D      BSQ33_05270 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      BSQ33_06675 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      BSQ33_11460 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      BSQ33_11455 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      BSQ33_04580 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
D      BSQ33_11290 succinate dehydrogenase assembly factor 2 family protein	K09159 cptB; antitoxin CptB 
C    AbiEii-AbiEi
B  Type V TA system
C    GhoT-GhoS
C    Other GhoT/OrtT toxin family protein
B  Type VI TA system
C    SocB-SocA
B  Type VII TA system
C    Hha-TomB
C    TglT-TakA
C    HepT-MntA
B  Type VIII TA system
C    SdsR-RyeA
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    BSQ33_12570 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: May 19, 2025