+D GENES KO
#
KEGG Orthology (KO) - Vibrio mimicus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vmi00010]
D AL543_10970 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_07585 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AL543_08275 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AL543_11635 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AL543_08195 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AL543_05940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_19260 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_11630 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AL543_10745 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AL543_11665 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_19315 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_03520 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_00820 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AL543_06860 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AL543_06855 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AL543_16545 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_17220 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_19265 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D AL543_08530 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AL543_15775 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AL543_17065 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_19340 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_18500 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vmi00020]
D AL543_19770 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AL543_12130 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AL543_15010 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AL543_19745 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AL543_19740 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_19730 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AL543_19735 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AL543_19755 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_19750 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_19765 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AL543_19760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AL543_08120 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_08125 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_08130 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D AL543_08135 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D AL543_15870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AL543_17165 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AL543_11355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AL543_08530 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AL543_06860 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AL543_06855 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vmi00030]
D AL543_10970 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AL543_00365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AL543_00370 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D AL543_11320 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D AL543_00375 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AL543_07985 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AL543_11610 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AL543_04010 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AL543_04015 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AL543_07215 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AL543_06570 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AL543_02200 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AL543_06560 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_20175 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AL543_10460 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D AL543_05785 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_10445 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_01775 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_10455 idnK; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D AL543_01780 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D AL543_05790 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D AL543_11635 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AL543_07585 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AL543_08275 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vmi00040]
D AL543_05795 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D AL543_05775 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D AL543_01785 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D AL543_01815 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D AL543_01790 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D AL543_03140 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AL543_11120 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AL543_02910 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D AL543_02905 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D AL543_02920 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D AL543_07985 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AL543_02965 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:vmi00051]
D AL543_18265 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AL543_00890 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AL543_02965 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_07585 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AL543_08275 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AL543_00910 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D AL543_04705 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AL543_11635 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AL543_08195 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AL543_18190 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D AL543_18245 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D AL543_04710 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AL543_00905 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vmi00052]
D AL543_17220 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AL543_17225 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AL543_05780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AL543_17230 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AL543_03165 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AL543_11120 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_06490 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AL543_17740 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_14655 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D AL543_14620 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D AL543_14645 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D AL543_14630 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D AL543_14635 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D AL543_14640 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D AL543_14650 nagA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AL543_14625 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:vmi00053]
D AL543_03140 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AL543_02295 cmtB; PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02925 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02290 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02930 PTS ascorbate transporter subunit IIC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02285 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D AL543_02940 L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D AL543_02910 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D AL543_02905 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D AL543_02920 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:vmi00500]
D AL543_02880 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AL543_11120 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AL543_03605 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_15770 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_03595 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_15760 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_03600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_15765 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_15775 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AL543_17065 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AL543_17935 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AL543_03565 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AL543_17930 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D AL543_01375 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AL543_01365 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AL543_06010 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D AL543_01370 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_01885 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D AL543_13670 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AL543_13675 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_10970 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vmi00520]
D AL543_19045 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D AL543_01430 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D AL543_12585 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AL543_08395 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AL543_20420 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_12175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_03615 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_11315 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_12170 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_14105 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_09310 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_16930 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D AL543_04625 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AL543_14100 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AL543_01905 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AL543_12180 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D AL543_11675 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AL543_12305 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AL543_09450 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AL543_10130 PTS N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D AL543_10125 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AL543_02875 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AL543_09305 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AL543_12575 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AL543_12580 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D AL543_07445 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AL543_10635 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AL543_04620 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D AL543_04615 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D AL543_04590 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D AL543_13735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AL543_13740 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AL543_19340 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_18500 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_11120 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AL543_03140 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AL543_17225 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AL543_05780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AL543_17230 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AL543_03165 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AL543_10970 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AL543_18265 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AL543_00890 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AL543_17935 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AL543_03565 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vmi00620]
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_06860 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AL543_06855 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_18455 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AL543_14800 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_02865 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_14795 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AL543_11665 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_19315 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_03520 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_20565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AL543_10490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AL543_10485 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AL543_01675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_14125 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_16130 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AL543_16545 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AL543_00800 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D AL543_02480 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AL543_00805 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase
D AL543_19295 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AL543_14170 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AL543_20535 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AL543_15705 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AL543_15250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AL543_08245 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AL543_11895 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D AL543_13245 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D AL543_13240 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_11900 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_13250 sodium pump decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AL543_11890 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AL543_11355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AL543_15870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AL543_17165 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AL543_08120 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_08125 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_08130 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D AL543_08135 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D AL543_08085 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AL543_08530 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AL543_00820 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AL543_12895 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_07260 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vmi00630]
D AL543_12900 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_12895 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AL543_11355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AL543_19770 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AL543_12130 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_03620 SDR family NAD(P)-dependent oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AL543_17200 catalase K03781 katE; catalase [EC:1.11.1.6]
D AL543_07395 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AL543_07980 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AL543_11105 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_05665 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_13850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_05675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AL543_05655 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_05670 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AL543_00395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AL543_05785 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_10445 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_01775 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AL543_16845 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AL543_16840 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AL543_16835 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AL543_19225 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vmi00640]
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_16055 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AL543_14800 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_02865 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_14795 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_18455 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AL543_09650 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_20565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AL543_10490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AL543_10485 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AL543_01675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_14125 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_19735 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AL543_19730 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AL543_16040 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AL543_16045 Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D AL543_16050 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D AL543_12130 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AL543_16035 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D AL543_03505 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:vmi00650]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_17980 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_03120 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AL543_03635 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AL543_03620 SDR family NAD(P)-dependent oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AL543_13240 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_11900 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_14585 maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D AL543_19755 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_19750 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_19765 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AL543_19760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AL543_08120 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_08125 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_08130 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D AL543_08135 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D AL543_18005 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_16460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_18455 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AL543_05890 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D AL543_07230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_09675 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_07225 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AL543_09670 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:vmi00660]
D AL543_07230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_09675 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_07225 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AL543_09670 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AL543_19735 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AL543_19730 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AL543_07270 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AL543_07275 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AL543_07265 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vmi00562]
D AL543_12940 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AL543_08195 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vmi00190]
D AL543_18590 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AL543_19755 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_19750 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_19765 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AL543_19760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AL543_08120 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_08125 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_08130 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D AL543_08135 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D AL543_12000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AL543_12005 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AL543_12010 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AL543_16645 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AL543_16640 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AL543_16635 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AL543_16630 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AL543_20485 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AL543_18340 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AL543_20480 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AL543_18335 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AL543_21845 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AL543_18330 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AL543_09470 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AL543_09460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AL543_09465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AL543_09475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AL543_09455 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AL543_09490 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AL543_09480 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AL543_09485 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AL543_07590 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AL543_06875 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D AL543_17725 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D AL543_12850 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AL543_12875 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vmi00680]
D AL543_16845 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AL543_16840 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AL543_16835 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AL543_05665 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_13850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_11105 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D AL543_07395 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AL543_08085 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AL543_11355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AL543_11635 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AL543_07585 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AL543_08275 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_17755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AL543_17760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AL543_17900 molecular chaperone TorD K03533 torD; TorA specific chaperone
D AL543_14800 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_02865 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_14795 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_00820 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AL543_10745 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AL543_07220 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_03980 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_15110 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AL543_06545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vmi00910]
D AL543_03770 nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D AL543_03765 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D AL543_15600 nrfA; ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D AL543_11260 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D AL543_16735 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AL543_17665 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_06675 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_06685 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_06680 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AL543_06690 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AL543_12060 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AL543_05685 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vmi00920]
D AL543_11800 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AL543_11805 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AL543_11810 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AL543_11815 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AL543_07660 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AL543_07665 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AL543_07655 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AL543_08455 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D AL543_11020 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AL543_11010 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D AL543_11015 NADPH-dependent assimilatory sulfite reductase hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AL543_04035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AL543_09010 thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D AL543_13765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_08095 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_13975 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AL543_14425 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AL543_17315 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AL543_08255 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vmi00061]
D AL543_20565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AL543_10490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AL543_10485 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AL543_01675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_14125 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AL543_19375 acyl carrier protein K02078 acpP; acyl carrier protein
D AL543_19385 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AL543_19390 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AL543_03310 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AL543_19845 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AL543_19370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AL543_19380 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AL543_16695 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D AL543_06085 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AL543_17980 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_03120 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_07235 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19190 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_06505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vmi00071]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_20475 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D AL543_17985 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D AL543_07235 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19190 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_06505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vmi00561]
D AL543_00395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AL543_03355 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AL543_09040 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AL543_19395 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AL543_11725 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AL543_07440 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AL543_03485 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AL543_17740 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vmi00564]
D AL543_08100 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AL543_03340 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AL543_03830 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AL543_03335 glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D AL543_03330 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D AL543_09040 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AL543_11725 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AL543_07440 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AL543_03485 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AL543_09985 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D AL543_08860 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D AL543_17045 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AL543_02225 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AL543_18955 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AL543_06115 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AL543_10620 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AL543_10760 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AL543_15380 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AL543_06160 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AL543_01455 phosphatase PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D AL543_17650 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:vmi00600]
D AL543_06490 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AL543_17740 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AL543_20420 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_12175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_03615 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_11315 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:vmi00592]
D AL543_09985 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vmi01040]
D AL543_03125 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AL543_14435 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AL543_17810 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vmi00230]
D AL543_06970 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AL543_03210 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AL543_08450 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D AL543_06560 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_20175 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AL543_14145 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AL543_10400 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AL543_20460 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AL543_15460 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D AL543_13485 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D AL543_20455 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AL543_09775 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AL543_09780 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AL543_15260 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AL543_14935 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AL543_10405 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AL543_14385 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AL543_04510 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AL543_20130 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AL543_11770 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AL543_14950 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D AL543_03070 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D AL543_01545 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AL543_06555 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AL543_00750 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AL543_12670 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AL543_12055 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AL543_13050 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AL543_12995 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AL543_12630 yjjX; non-canonical purine NTP phosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D AL543_11520 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AL543_06220 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D AL543_13055 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AL543_02505 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D AL543_08360 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AL543_17115 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_15580 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_17110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AL543_15575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AL543_04735 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AL543_19165 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D AL543_19160 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D AL543_08370 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AL543_10540 guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AL543_12845 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AL543_07070 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D AL543_08920 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D AL543_07875 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AL543_08595 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D AL543_13615 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D AL543_06870 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AL543_07675 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AL543_14065 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AL543_07065 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AL543_06960 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AL543_11400 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D AL543_07655 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AL543_07660 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AL543_07665 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AL543_04450 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:vmi00240]
D AL543_06730 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AL543_06735 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AL543_07425 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AL543_07430 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D AL543_00510 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AL543_16730 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AL543_10150 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AL543_18835 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AL543_06130 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AL543_12995 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AL543_07065 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AL543_11235 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AL543_17335 M48 family peptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D AL543_07055 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AL543_18860 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AL543_14310 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D AL543_04510 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AL543_20130 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AL543_11770 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AL543_04095 noncanonical pyrimidine nucleotidase, YjjG family K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D AL543_02215 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D AL543_14290 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D AL543_00750 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AL543_20450 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AL543_06870 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AL543_07675 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AL543_13615 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D AL543_15470 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D AL543_04735 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AL543_17115 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_15580 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_17110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AL543_15575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AL543_19160 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D AL543_05930 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AL543_19355 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AL543_06565 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D AL543_15150 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D AL543_12500 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vmi00250]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_07160 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AL543_19240 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AL543_07880 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AL543_14085 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AL543_19155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AL543_11105 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D AL543_18660 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AL543_08320 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AL543_08065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AL543_08060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AL543_07875 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AL543_14935 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AL543_07425 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AL543_07430 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D AL543_18005 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_16460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_06675 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_06685 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_06680 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AL543_06690 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AL543_16735 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AL543_17665 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AL543_01105 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_06730 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AL543_06735 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AL543_11505 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AL543_11675 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AL543_14145 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vmi00260]
D AL543_05840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11100 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_06635 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AL543_08260 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AL543_19460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_19835 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_06630 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AL543_06625 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AL543_03205 low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AL543_05665 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_13850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_11105 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D AL543_07395 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AL543_00395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AL543_10745 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AL543_07220 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_03980 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_15110 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AL543_06545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AL543_00315 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AL543_00310 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D AL543_05675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AL543_05655 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_05670 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AL543_10620 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AL543_15850 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AL543_03795 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AL543_09655 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AL543_11285 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AL543_15915 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D AL543_15160 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AL543_15165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AL543_05850 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AL543_17385 aminotransferase class III K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AL543_05855 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D AL543_14555 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D AL543_05845 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vmi00270]
D AL543_13765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_08095 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_13975 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AL543_14425 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AL543_17655 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AL543_11095 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AL543_17825 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AL543_00025 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AL543_11600 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AL543_06700 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AL543_12670 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AL543_16305 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AL543_16765 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D AL543_00220 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AL543_11925 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AL543_05840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11100 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_06635 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AL543_08260 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AL543_19460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_19835 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_17315 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AL543_08255 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AL543_00320 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AL543_09665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AL543_11920 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AL543_11580 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_04035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AL543_15915 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D AL543_11355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AL543_15850 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AL543_03795 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AL543_11795 cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D AL543_07220 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_03980 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_15110 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vmi00280]
D AL543_09665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_01345 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D AL543_05890 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vmi00290]
D AL543_09655 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AL543_07270 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AL543_07275 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AL543_07265 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AL543_07230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_09675 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_07225 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AL543_09670 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AL543_09855 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AL543_09660 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AL543_09665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AL543_09610 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D AL543_19155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AL543_07260 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vmi00300]
D AL543_05840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11100 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_06635 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AL543_08260 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AL543_19460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_19835 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_20065 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AL543_06740 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AL543_06440 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AL543_07950 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AL543_20045 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AL543_08900 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AL543_08905 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AL543_06825 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AL543_06820 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vmi00310]
D AL543_19740 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_15915 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D AL543_10425 lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D AL543_18005 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_16460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_02270 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D AL543_15295 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:vmi00220]
D AL543_07420 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AL543_08065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AL543_08060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AL543_11270 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D AL543_11505 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_16735 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AL543_17665 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_19155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AL543_06395 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AL543_08070 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AL543_08075 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AL543_07950 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AL543_08080 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vmi00330]
D AL543_05810 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D AL543_05805 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D AL543_01045 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D AL543_17380 saccharopine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D AL543_17375 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D AL543_00640 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AL543_07945 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D AL543_07940 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D AL543_15520 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D AL543_11540 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AL543_01105 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AL543_06205 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AL543_06200 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:vmi00340]
D AL543_14965 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AL543_15000 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D AL543_14990 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AL543_14985 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AL543_14995 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AL543_14980 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_14970 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AL543_15315 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AL543_15320 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D AL543_15330 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D AL543_15325 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:vmi00350]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AL543_16075 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AL543_16080 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D AL543_16090 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D AL543_16085 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D AL543_16360 FAD-binding oxidoreductase K25271 tynA; tyramine oxidase subunit A [EC:1.4.3.-]
D AL543_16350 ornithine cyclodeaminase K25272 tynB; tyramine oxidase subunit B [EC:1.4.3.-]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AL543_16470 flavin-dependent monooxygenase K23492 C2-hpah; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D AL543_16395 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D AL543_16455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D AL543_16440 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D AL543_16445 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D AL543_08190 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D AL543_16430 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D AL543_16435 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D AL543_16420 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D AL543_16425 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D AL543_18005 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_16460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_07035 tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:vmi00360]
D AL543_05885 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AL543_05360 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D AL543_16075 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AL543_13200 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AL543_17070 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vmi00380]
D AL543_19740 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_02320 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D AL543_17200 catalase K03781 katE; catalase [EC:1.11.1.6]
D AL543_17070 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vmi00400]
D AL543_00865 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_16805 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_12600 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_08000 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AL543_10495 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AL543_09795 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AL543_08005 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AL543_17955 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AL543_19875 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AL543_15185 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AL543_15180 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AL543_15175 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AL543_15170 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D AL543_15160 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AL543_15165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AL543_12605 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D AL543_12645 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AL543_05885 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vmi00410]
D AL543_12080 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vmi00430]
D AL543_10070 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AL543_18660 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AL543_16735 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AL543_14795 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AL543_14800 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AL543_02865 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vmi00440]
D AL543_04105 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D AL543_04115 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:vmi00450]
D AL543_08255 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AL543_17655 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AL543_11095 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AL543_17825 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AL543_00025 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AL543_17135 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AL543_15220 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AL543_07660 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AL543_07665 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AL543_14300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vmi00460]
D AL543_10070 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AL543_19240 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AL543_07880 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AL543_05665 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_13850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vmi00470]
D AL543_10960 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AL543_04265 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AL543_14545 fatty acid--CoA ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AL543_14550 acyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AL543_15915 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D AL543_11505 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AL543_08680 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AL543_06810 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AL543_11285 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AL543_08900 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AL543_08905 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AL543_13200 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vmi00480]
D AL543_10070 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AL543_03160 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AL543_03150 allophanate hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D AL543_11920 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AL543_11580 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AL543_07360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AL543_12990 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D AL543_16745 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AL543_06230 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AL543_10035 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AL543_15010 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AL543_00375 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AL543_00365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AL543_08045 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D AL543_16105 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D AL543_01045 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vmi00511]
D AL543_06490 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AL543_20420 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_12175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_03615 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_11315 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:vmi00540]
D AL543_06080 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AL543_06775 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AL543_06090 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AL543_18370 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AL543_06075 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AL543_18535 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AL543_07490 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AL543_20135 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AL543_07495 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AL543_18525 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AL543_10260 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AL543_10165 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AL543_10160 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D AL543_18460 DUF2219 domain-containing protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D AL543_01250 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AL543_10235 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D AL543_20470 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AL543_06980 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AL543_13660 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AL543_10300 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AL543_10275 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AL543_10285 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:vmi00542]
D AL543_10355 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vmi00541]
D AL543_11120 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AL543_03165 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AL543_03140 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AL543_10310 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AL543_18265 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AL543_00890 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AL543_09450 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AL543_13735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AL543_13740 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:vmi00550]
D AL543_07445 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AL543_10635 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AL543_06795 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AL543_06810 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AL543_06825 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AL543_04265 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AL543_06820 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AL543_06120 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AL543_11745 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_07250 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_06815 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AL543_06800 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AL543_08035 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AL543_12120 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AL543_13890 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AL543_06830 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AL543_05700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_13875 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_12270 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vmi00552]
D AL543_11745 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_07250 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_10355 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AL543_14545 fatty acid--CoA ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AL543_14550 acyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vmi00543]
D AL543_13815 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D AL543_10355 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AL543_03320 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AL543_13750 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D AL543_13775 glycosyltransferase family 1 protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D AL543_13785 glycosyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D AL543_13765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_08095 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vmi00730]
D AL543_09270 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AL543_15830 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AL543_09260 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D AL543_12955 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AL543_13590 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AL543_09245 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D AL543_13565 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AL543_09250 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AL543_06165 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AL543_17735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AL543_10765 small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AL543_14065 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vmi00740]
D AL543_15670 GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AL543_06180 ribB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AL543_06190 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AL543_08885 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D AL543_01035 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D AL543_06175 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AL543_06185 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AL543_12535 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AL543_16395 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D AL543_10575 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D AL543_12810 oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D AL543_06970 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AL543_03210 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AL543_07570 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vmi00750]
D AL543_01130 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AL543_07045 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D AL543_11625 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D AL543_19840 DUF3410 domain-containing protein K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D AL543_15110 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AL543_11415 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AL543_07105 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AL543_06625 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vmi00760]
D AL543_07160 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AL543_18285 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AL543_06905 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AL543_02025 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AL543_01545 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AL543_06555 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AL543_04510 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AL543_20130 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AL543_11770 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AL543_02755 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AL543_07065 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AL543_10720 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D AL543_02750 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AL543_11820 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AL543_03500 bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D AL543_16815 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D AL543_13410 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AL543_08785 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D AL543_04425 pntA; NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AL543_04420 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AL543_14585 maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D AL543_18005 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AL543_16460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vmi00770]
D AL543_07230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_09675 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AL543_07225 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AL543_09670 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AL543_09855 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AL543_09660 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AL543_12085 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AL543_06360 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AL543_12080 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AL543_10645 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D AL543_10175 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AL543_07065 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AL543_10210 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AL543_06930 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AL543_07100 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AL543_03185 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D AL543_09665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AL543_15055 panP; putative pyridoxal-dependent aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:vmi00780]
D AL543_14875 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D AL543_19845 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AL543_19370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AL543_19380 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AL543_06085 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AL543_08435 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D AL543_14870 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AL543_14860 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AL543_14880 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AL543_14865 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D AL543_10640 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vmi00785]
D AL543_13865 lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AL543_13860 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_06860 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AL543_06855 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AL543_19745 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AL543_19740 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AL543_05675 gcvP; glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AL543_05655 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AL543_05670 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vmi00790]
D AL543_04055 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AL543_11735 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AL543_11740 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AL543_12090 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AL543_12300 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AL543_11395 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AL543_14130 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AL543_15670 GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AL543_06180 ribB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AL543_07955 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D AL543_15865 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AL543_19365 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AL543_15845 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AL543_05880 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AL543_05885 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D AL543_16175 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AL543_16180 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AL543_13630 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AL543_14240 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AL543_14250 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AL543_14260 molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AL543_14245 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AL543_04050 molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AL543_16920 bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AL543_16915 molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vmi00670]
D AL543_11395 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AL543_04065 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D AL543_19035 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AL543_05665 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_13850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AL543_20460 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AL543_10405 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AL543_09745 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AL543_05655 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AL543_11095 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AL543_12500 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AL543_19225 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AL543_08265 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AL543_07210 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vmi00860]
D AL543_20405 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AL543_20160 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AL543_12235 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AL543_08995 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AL543_08930 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AL543_08935 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AL543_10725 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AL543_09790 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D AL543_08950 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D AL543_09415 menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D AL543_14070 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AL543_08940 heme biosynthesis operon protein HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AL543_07670 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AL543_16165 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D AL543_14320 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AL543_03420 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D AL543_06705 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AL543_15510 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D AL543_15505 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D AL543_15500 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D AL543_15515 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D AL543_00420 hutZ; heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D AL543_10925 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vmi00130]
D AL543_09030 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D AL543_09035 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AL543_10565 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D AL543_07570 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AL543_07185 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D AL543_15585 bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D AL543_07190 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D AL543_09085 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AL543_13950 ubiF; FAD-dependent oxidoreductase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D AL543_19150 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AL543_19145 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AL543_10325 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AL543_19140 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D AL543_19130 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AL543_19125 o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D AL543_19135 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D AL543_04230 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AL543_08210 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AL543_00970 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AL543_20105 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AL543_16075 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vmi00900]
D AL543_13565 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AL543_06110 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AL543_11755 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AL543_20170 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AL543_11760 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AL543_13010 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AL543_12555 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_03440 3-hydroxy-3-methylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D AL543_07570 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AL543_13570 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AL543_11365 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AL543_06120 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:vmi00907]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AL543_11610 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AL543_04010 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D AL543_10310 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:vmi01053]
D AL543_19150 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AL543_04300 salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D AL543_04320 methyltransferase domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D AL543_04310 thiazolinyl imide reductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D AL543_04315 hybrid non-ribosomal peptide synthetase/type I polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D AL543_04295 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D AL543_10310 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vmi00332]
D AL543_06205 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AL543_06200 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vmi00261]
D AL543_07660 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AL543_07665 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AL543_05840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11840 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_11100 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AL543_06635 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AL543_08260 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AL543_19460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_19835 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AL543_20065 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AL543_06740 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vmi00521]
D AL543_19785 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AL543_12940 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AL543_10310 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D AL543_10310 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:vmi00401]
D AL543_12605 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:vmi00405]
D AL543_04925 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D AL543_15185 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AL543_15180 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AL543_19385 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AL543_19380 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AL543_19375 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vmi00999]
D AL543_11600 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AL543_09795 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:vmi00997]
D AL543_14495 lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D AL543_14505 N-acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D AL543_14510 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D AL543_14500 aerobactin synthase IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vmi00362]
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_13240 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_11900 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vmi00627]
D AL543_16130 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AL543_07570 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:vmi00364]
D AL543_12790 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:vmi00625]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:vmi00361]
D AL543_12790 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:vmi00623]
D AL543_12790 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vmi00633]
D AL543_03935 oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D AL543_01755 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D AL543_09435 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AL543_14350 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vmi00643]
D AL543_16080 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D AL543_16090 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D AL543_16085 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vmi00930]
D AL543_09430 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AL543_14355 fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vmi00626]
D AL543_04075 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AL543_19445 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vmi03020]
D AL543_10705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AL543_10710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AL543_07720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AL543_08365 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vmi03010]
D AL543_18855 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AL543_06140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AL543_07815 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AL543_07725 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AL543_07760 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AL543_10930 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AL543_10905 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AL543_07775 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AL543_11995 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AL543_07850 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AL543_07730 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AL543_10900 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AL543_07735 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AL543_07780 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AL543_12355 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AL543_11945 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AL543_07800 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AL543_10940 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AL543_07825 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AL543_12525 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AL543_11710 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AL543_10690 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AL543_07830 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AL543_07845 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AL543_07840 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AL543_07785 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AL543_07770 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AL543_10700 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AL543_10945 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AL543_10695 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AL543_10685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AL543_11990 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AL543_07795 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AL543_07750 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AL543_07810 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AL543_07715 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AL543_07765 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AL543_11960 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AL543_05635 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AL543_11370 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AL543_07820 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AL543_07835 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AL543_07790 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AL543_17460 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AL543_11375 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AL543_10190 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AL543_07805 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AL543_07755 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AL543_13515 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D AL543_08240 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AL543_19400 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AL543_10195 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AL543_09555 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AL543_05640 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AL543_13520 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AL543_07740 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AL543_08670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_07330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_10580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_12680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09825 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09365 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_07310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_10595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_08645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_07295 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09360 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_07305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_08640 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11070 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_10600 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vmi00970]
D AL543_08650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_09400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_10590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_12685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_09890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_19030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_20390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_11445 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_14215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_11465 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_09355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_11075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_12700 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_08635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_10605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_03225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_03285 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_15385 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_20205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20250 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20260 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20220 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20230 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_07325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_08665 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_09820 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_09380 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_10660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_15390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10780 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_15400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_04455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_09895 tRNA-His K14226 tRNA-His; tRNA His
D AL543_09905 tRNA-His K14226 tRNA-His; tRNA His
D AL543_11030 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_10585 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_11055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_03280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_12320 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_07340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_15395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_07320 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_08660 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_09375 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_12325 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20190 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20210 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10805 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10810 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_11690 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10795 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20240 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_11455 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_11470 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_11480 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_09910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_19490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_09900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_20430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_09835 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_11850 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_11860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_18185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_19495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_10665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_07300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_10650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_08630 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AL543_10655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13710 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13700 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13705 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_07315 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_09370 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_17245 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_08655 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_17240 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_20405 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AL543_14110 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AL543_13035 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_11835 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_15145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AL543_15835 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AL543_09620 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AL543_09615 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AL543_05650 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AL543_14855 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AL543_18360 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AL543_14300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AL543_09745 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AL543_07370 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AL543_13915 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AL543_12540 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AL543_12445 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AL543_19685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AL543_13505 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AL543_13015 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AL543_15425 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AL543_15430 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AL543_11565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_12265 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_01020 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AL543_07975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vmi03060]
D AL543_07745 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AL543_10675 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AL543_12315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AL543_03585 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_12930 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_03590 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_12935 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_12925 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AL543_09540 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AL543_06755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AL543_08105 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AL543_11940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AL543_14460 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AL543_08805 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AL543_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AL543_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AL543_09060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AL543_07125 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AL543_12545 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vmi04122]
D AL543_12955 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AL543_04035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AL543_09635 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AL543_20090 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AL543_10895 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D AL543_10890 tusC; sulfurtransferase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D AL543_10885 sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D AL543_16135 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D AL543_14945 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AL543_14260 molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AL543_14240 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AL543_14255 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D AL543_04045 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AL543_14250 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AL543_14245 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AL543_13590 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AL543_09255 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AL543_09260 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vmi03018]
D AL543_12480 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AL543_19425 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D AL543_10545 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AL543_12360 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AL543_02740 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_03190 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_16340 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_07860 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AL543_03055 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AL543_10080 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AL543_10555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_13420 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AL543_08165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AL543_10840 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AL543_12850 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AL543_12875 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AL543_12095 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vmi03030]
D AL543_20520 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_10505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_15805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_06065 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AL543_14390 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AL543_19350 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AL543_13905 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AL543_12405 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AL543_07365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AL543_09580 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AL543_10955 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AL543_11700 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_20525 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AL543_06070 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vmi03410]
D AL543_14175 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AL543_06610 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AL543_11495 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AL543_10205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AL543_11510 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AL543_01935 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AL543_17660 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AL543_18425 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AL543_06615 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_06880 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vmi03420]
D AL543_18575 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AL543_11115 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AL543_14220 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AL543_15375 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AL543_10050 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vmi03430]
D AL543_11790 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AL543_10830 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D AL543_12475 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D AL543_10050 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AL543_15485 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AL543_13045 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AL543_13575 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AL543_06880 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_06065 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AL543_09580 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AL543_14390 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AL543_13905 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AL543_19350 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AL543_20520 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_10505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_15805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_07365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AL543_12405 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AL543_07990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vmi03440]
D AL543_06880 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_09585 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AL543_07110 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AL543_14400 recombination protein RecR K06187 recR; recombination protein RecR
D AL543_11825 recA; recombinase RecA K03553 recA; recombination protein RecA
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_18350 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AL543_18345 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AL543_18355 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AL543_08375 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AL543_06415 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AL543_06420 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D AL543_06410 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AL543_06065 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AL543_09580 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AL543_14390 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AL543_13905 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AL543_19350 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AL543_20520 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_10505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_15805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_07365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AL543_12405 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AL543_08235 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AL543_10935 primosomal replication protein N K02686 priB; primosomal replication protein N
D AL543_18410 prepilin peptidase K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vmi03250]
D AL543_06330 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vmi02010]
D AL543_11800 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AL543_11805 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AL543_11810 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AL543_11815 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AL543_16900 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D AL543_16905 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D AL543_16910 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D AL543_03425 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AL543_03430 molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AL543_03435 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AL543_04120 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_12150 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_03730 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_04130 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D AL543_12155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AL543_03725 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AL543_04125 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_12160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_03720 fbpC; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_07565 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D AL543_07560 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D AL543_07555 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D AL543_01300 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16550 potD; spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16555 potD; spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_12640 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16560 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D AL543_16565 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D AL543_16570 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AL543_00630 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AL543_00625 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D AL543_00620 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D AL543_00635 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AL543_01860 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AL543_07460 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AL543_07465 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AL543_07470 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AL543_07455 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AL543_07475 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AL543_18515 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AL543_02985 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_02195 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D AL543_08410 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_02980 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_02190 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_08400 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_08405 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AL543_02185 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AL543_02180 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D AL543_15985 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AL543_15995 galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D AL543_15990 galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D AL543_17020 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AL543_17025 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AL543_17030 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AL543_17035 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AL543_03040 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_01590 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_12840 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_01595 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AL543_12855 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D AL543_01600 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AL543_12860 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AL543_01605 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AL543_12865 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AL543_03235 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D AL543_03245 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D AL543_03240 ABC transporter K09999 artQ; arginine transport system permease protein
D AL543_03230 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D AL543_16160 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AL543_16155 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D AL543_16150 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D AL543_16145 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AL543_09570 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AL543_09565 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D AL543_09560 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D AL543_18440 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D AL543_18430 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D AL543_18435 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein
D AL543_18445 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D AL543_13645 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D AL543_13650 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AL543_13655 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AL543_14765 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D AL543_14770 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D AL543_14775 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D AL543_14780 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D AL543_00785 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_14785 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_17690 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AL543_17695 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D AL543_17700 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D AL543_17705 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AL543_17710 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D AL543_04170 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AL543_18710 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AL543_04175 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D AL543_18720 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein
D AL543_04180 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AL543_18715 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AL543_04185 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AL543_14520 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AL543_10105 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AL543_10110 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AL543_14515 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AL543_10100 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AL543_14525 iron ABC transporter substrate-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AL543_06710 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D AL543_15525 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D AL543_15530 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D AL543_19715 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AL543_19725 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D AL543_19720 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AL543_18555 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D AL543_18565 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AL543_18560 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AL543_19590 ccmD; heme exporter CcmD K02196 ccmD; heme exporter protein D
D AL543_19595 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D AL543_19600 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AL543_19605 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AL543_07355 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AL543_07350 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AL543_07510 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AL543_08795 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AL543_08800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AL543_18540 lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AL543_01745 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AL543_01150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AL543_15210 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AL543_15215 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:vmi02060]
D AL543_13960 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AL543_13965 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_19340 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_18500 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_14105 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_09310 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_02880 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AL543_13670 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AL543_10130 PTS N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D AL543_00905 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AL543_03605 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_15770 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_03595 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_15760 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_03600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_15765 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_14645 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D AL543_14630 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D AL543_14635 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D AL543_14640 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D AL543_02295 cmtB; PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02925 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02290 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02930 PTS ascorbate transporter subunit IIC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02285 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D AL543_04700 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D AL543_04710 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AL543_18245 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D AL543_18190 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D AL543_04705 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AL543_12485 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D AL543_07535 phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D AL543_18250 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AL543_07525 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vmi03070]
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_08510 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D AL543_08515 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D AL543_08500 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D AL543_08495 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D AL543_08490 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AL543_08485 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D AL543_08480 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D AL543_08475 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D AL543_08470 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D AL543_08465 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D AL543_08505 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AL543_03585 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_12930 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_03590 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_12935 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_10675 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AL543_12315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AL543_07745 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AL543_12925 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AL543_09540 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AL543_06755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AL543_08805 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AL543_08105 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AL543_11940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AL543_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AL543_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AL543_09060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AL543_01385 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_16485 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_02150 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_01380 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D AL543_16480 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D AL543_02105 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D AL543_02140 icmF; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D AL543_02115 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK
D AL543_02120 clpV; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vmi02020]
D AL543_12835 two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AL543_12830 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AL543_03040 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_01590 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_12840 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_08385 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AL543_08390 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AL543_08300 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AL543_08295 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AL543_15950 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_13685 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_15955 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D AL543_11970 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AL543_03000 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D AL543_02995 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D AL543_01260 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AL543_01265 two-component system response regulator BasR K07666 qseB; two-component system, OmpR family, response regulator QseB
D AL543_20280 flagellin K02406 fliC; flagellin
D AL543_20005 flagellin B K02406 fliC; flagellin
D AL543_20010 flagellin K02406 fliC; flagellin
D AL543_20015 flagellin K02406 fliC; flagellin
D AL543_20270 flagellin K02406 fliC; flagellin
D AL543_19650 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AL543_13580 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D AL543_03515 torS; hybrid sensor histidine kinase/response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D AL543_17895 two-component system response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D AL543_17760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AL543_17755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AL543_17900 molecular chaperone TorD K03533 torD; TorA specific chaperone
D AL543_06660 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AL543_06655 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D AL543_16010 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_18175 tripartite tricarboxylate transporter protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_16380 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_16015 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_16375 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_18170 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_16020 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_18165 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_16370 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_09575 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AL543_14545 fatty acid--CoA ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AL543_14550 acyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AL543_13235 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AL543_13230 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D AL543_01960 DNA-binding response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D AL543_13260 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D AL543_13265 citD; citrate lyase ACP K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D AL543_13270 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AL543_13275 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D AL543_13280 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D AL543_13285 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D AL543_02745 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D AL543_15250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AL543_15740 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D AL543_03785 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D AL543_03790 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D AL543_08120 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AL543_08125 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AL543_08130 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D AL543_08135 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D AL543_03525 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AL543_03735 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AL543_03740 signal transduction histidine-protein kinase/phosphatase UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AL543_03745 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D AL543_07080 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AL543_15370 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AL543_11845 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D AL543_17570 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AL543_18135 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D AL543_03655 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AL543_18115 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_03660 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_18110 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D AL543_03665 general secretion pathway protein GspD K02280 cpaC; pilus assembly protein CpaC
D AL543_18085 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_03675 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_18080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AL543_03680 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AL543_18075 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AL543_03685 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AL543_18070 type II secretion system F family protein K12511 tadC; tight adherence protein C
D AL543_03690 type II secretion system F family protein K12511 tadC; tight adherence protein C
D AL543_06150 bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AL543_20550 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D AL543_08580 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AL543_08585 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_03535 ABC transporter substrate-binding protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D AL543_03540 HAMP domain-containing protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D AL543_03545 sigma-54-dependent Fis family transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D AL543_18905 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AL543_18910 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AL543_02250 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AL543_07515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AL543_06910 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D AL543_20350 chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_01195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_10430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_20080 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15800 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_06990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_11460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01180 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_05710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03825 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_09100 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_00850 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_01205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_01210 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19620 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_01215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_19635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_15935 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_19645 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_14725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01185 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_19630 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_20355 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_19305 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_00685 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_17265 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_03395 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D AL543_03400 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D AL543_04680 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D AL543_14230 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D AL543_14225 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO
D AL543_12050 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D AL543_18925 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D AL543_18920 C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AL543_18915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AL543_19980 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D AL543_19975 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D AL543_19970 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D AL543_07930 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AL543_11505 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AL543_12000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AL543_12005 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AL543_12010 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AL543_16645 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AL543_16640 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AL543_16635 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AL543_16630 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AL543_20485 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AL543_18340 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AL543_20480 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AL543_18335 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AL543_21845 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AL543_18330 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_14325 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AL543_13735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AL543_13740 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AL543_16530 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D AL543_14715 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D AL543_01170 two-component system sensor histidine kinase/response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D AL543_01175 anti-sigma factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D AL543_20365 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vmi04148]
D AL543_01045 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D AL543_12000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vmi02024]
D AL543_11925 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AL543_03395 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D AL543_03400 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D AL543_04675 CAI-1 autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D AL543_04680 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D AL543_14230 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D AL543_14225 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO
D AL543_10840 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AL543_12050 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D AL543_08090 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D AL543_15185 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AL543_15180 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AL543_00070 peptidase M23 K08642 lasA; LasA protease [EC:3.4.24.-]
D AL543_00865 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_16805 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_12600 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AL543_04925 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D AL543_01260 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AL543_01265 two-component system response regulator BasR K07666 qseB; two-component system, OmpR family, response regulator QseB
D AL543_03740 signal transduction histidine-protein kinase/phosphatase UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AL543_03745 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D AL543_13095 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AL543_13105 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D AL543_19005 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AL543_18990 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AL543_18995 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AL543_18985 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AL543_07235 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19190 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_06505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_07930 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AL543_10980 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AL543_15670 GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AL543_06190 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AL543_14765 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D AL543_14770 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D AL543_14775 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D AL543_14780 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D AL543_00785 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_14785 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_09925 nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_01230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_05730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_12210 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_05725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_09930 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_01235 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_12205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_05720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_09935 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_01240 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_12200 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_12195 sugar ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_05715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_09920 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_01245 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_18705 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_12190 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AL543_18700 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AL543_09540 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AL543_08685 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D AL543_10675 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AL543_12315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AL543_07745 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AL543_12925 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AL543_06755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AL543_08805 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AL543_08105 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AL543_11940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vmi05111]
D AL543_11925 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AL543_03400 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D AL543_03395 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D AL543_04675 CAI-1 autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D AL543_04680 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D AL543_14230 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D AL543_14225 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO
D AL543_10840 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AL543_08090 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D AL543_14365 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D AL543_00660 LuxR family transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D AL543_12450 sigma-54-dependent Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D AL543_13730 low molecular weight phosphotyrosine protein phosphatase K20945 vpsU; tyrosine-protein phosphatase [EC:3.1.3.48]
D AL543_13735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AL543_13740 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AL543_13765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_08095 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AL543_13750 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D AL543_13755 sugar transporter K20946 vpsE; polysaccharide biosynthesis protein VpsE
D AL543_13760 hypothetical protein K20947 vpsF; polysaccharide biosynthesis protein VpsF
D AL543_13775 glycosyltransferase family 1 protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D AL543_13780 aspartate-semialdehyde dehydrogenase K20948 vpsJ; polysaccharide biosynthesis protein VpsJ
D AL543_13785 glycosyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D AL543_13815 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D AL543_13820 TetR family transcriptional regulator K20920 vpsM; polysaccharide biosynthesis protein VpsM
D AL543_13825 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D AL543_13830 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D AL543_13835 hypothetical protein K20949 vpsP; polysaccharide biosynthesis protein VpsP
D AL543_13840 VanZ family protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D AL543_08515 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D AL543_08510 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D AL543_08505 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AL543_08500 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D AL543_08495 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D AL543_08490 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AL543_08485 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D AL543_08480 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D AL543_08475 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D AL543_08470 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D AL543_08465 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D AL543_08460 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D AL543_13800 hemolysin K20952 rbmC; rugosity and biofilm structure modulator C
D AL543_13790 hypothetical protein K20953 rbmA; rugosity and biofilm structure modulator A
D AL543_14055 transcriptional regulator K10921 toxR; cholera toxin transcriptional activator
D AL543_14050 hypothetical protein K10922 toxS; transmembrane regulatory protein ToxS
D AL543_12275 porin K08720 ompU; outer membrane protein OmpU
D AL543_17210 DUF4092 domain-containing protein K10939 acfD; accessory colonization factor AcfD
D AL543_12050 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D AL543_06040 hemagglutinin K08604 hap; vibriolysin [EC:3.4.24.25]
D AL543_07080 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AL543_15370 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AL543_11845 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_19340 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_18500 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_08920 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D AL543_07930 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AL543_10470 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AL543_14830 sensor domain-containing diguanylate cyclase K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D AL543_01610 GGDEF domain-containing protein K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D AL543_14455 GGDEF domain-containing protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D AL543_06255 diguanylate cyclase K20958 cdgL; diguanylate cyclase [EC:2.7.7.65]
D AL543_16230 sensor domain-containing diguanylate cyclase K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D AL543_00590 GGDEF domain-containing protein K20960 K20960; diguanylate cyclase [EC:2.7.7.65]
D AL543_07085 sensor domain-containing diguanylate cyclase K20961 vpvC; diguanylate cyclase [EC:2.7.7.65]
D AL543_17800 sensor domain-containing phosphodiesterase K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_03115 sensor domain-containing phosphodiesterase K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_17565 diguanylate phosphodiesterase K13246 vieA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_08850 EAL domain-containing protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_08880 sensor domain-containing phosphodiesterase K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_12390 bifunctional diguanylate cyclase/phosphodiesterase K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_12635 GGDEF-domain containing protein K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_11170 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D AL543_11190 MSHA biogenesis protein MshA K10924 mshA; MSHA pilin protein MshA
D AL543_11185 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB
D AL543_11195 type II secretion system protein K10926 mshC; MSHA pilin protein MshC
D AL543_11200 type II secretion system protein K10927 mshD; MSHA pilin protein MshD
D AL543_19980 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D AL543_07515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AL543_11785 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D AL543_19975 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D AL543_19970 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D AL543_19650 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vmi02030]
D AL543_10430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_20080 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15800 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_06990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_11460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01180 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_05710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03825 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_09100 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_00850 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_00630 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AL543_02985 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_02195 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D AL543_08410 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_15985 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AL543_01215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_19635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_01205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_01210 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19620 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_15935 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_19645 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_14725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_14730 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D AL543_19640 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AL543_10975 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D AL543_01185 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_19630 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_20355 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_19305 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_00685 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_17265 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_01190 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AL543_20350 chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_01195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_19955 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AL543_19925 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AL543_19920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AL543_13580 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D AL543_13585 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vmi02040]
D AL543_19965 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AL543_19960 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AL543_19955 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AL543_19950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AL543_19945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AL543_19940 flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D AL543_19935 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D AL543_09020 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D AL543_19930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D AL543_19925 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AL543_19920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AL543_19915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AL543_19910 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AL543_19905 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AL543_19900 flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AL543_19665 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AL543_19895 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AL543_20360 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AL543_20335 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AL543_20330 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AL543_20325 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D AL543_20320 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D AL543_20315 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AL543_20310 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AL543_20305 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AL543_20300 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AL543_20295 flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AL543_20290 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AL543_20285 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AL543_20380 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D AL543_20375 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP
D AL543_20385 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT
D AL543_07870 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D AL543_14160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D AL543_20280 flagellin K02406 fliC; flagellin
D AL543_20005 flagellin B K02406 fliC; flagellin
D AL543_20010 flagellin K02406 fliC; flagellin
D AL543_20015 flagellin K02406 fliC; flagellin
D AL543_20270 flagellin K02406 fliC; flagellin
D AL543_19995 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D AL543_19985 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D AL543_13580 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D AL543_13585 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AL543_20365 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AL543_20370 molecular chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D AL543_11695 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AL543_19980 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D AL543_07515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AL543_19970 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D AL543_19650 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D AL543_11095 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vmi01501]
D AL543_12275 porin K08720 ompU; outer membrane protein OmpU
D AL543_06335 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AL543_12585 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AL543_08395 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AL543_14765 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D AL543_14770 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D AL543_14775 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D AL543_14780 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D AL543_00785 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_14785 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_09875 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D AL543_09870 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_13715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_09865 transporter K18138 acrB; multidrug efflux pump
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_08035 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AL543_13890 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AL543_06830 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vmi01502]
D AL543_04265 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AL543_10960 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AL543_06820 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AL543_06815 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AL543_06800 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vmi01503]
D AL543_01250 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AL543_17690 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AL543_17695 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D AL543_17700 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D AL543_17705 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AL543_17710 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D AL543_08300 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AL543_08295 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AL543_10825 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AL543_01570 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS
D AL543_11970 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AL543_09690 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AL543_06330 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AL543_09870 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_13715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_09865 transporter K18138 acrB; multidrug efflux pump
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_06080 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AL543_14545 fatty acid--CoA ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AL543_14550 acyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vmi01000]
C 01001 Protein kinases [BR:vmi01001]
D AL543_18055 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AL543_09945 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AL543_00830 anti-sigma factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D AL543_13830 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D AL543_12835 two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AL543_08385 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AL543_15950 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_13685 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_08300 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AL543_01260 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AL543_03515 torS; hybrid sensor histidine kinase/response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D AL543_06660 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AL543_03785 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D AL543_03740 signal transduction histidine-protein kinase/phosphatase UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AL543_07080 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AL543_17570 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AL543_15735 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AL543_13235 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AL543_17280 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AL543_12595 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AL543_08580 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AL543_03540 HAMP domain-containing protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D AL543_18905 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AL543_16890 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AL543_14735 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AL543_01215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_19635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_03400 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D AL543_04680 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D AL543_19975 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D AL543_16530 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D AL543_12215 HAMP domain-containing protein K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vmi01009]
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AL543_06545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vmi01002]
D AL543_12545 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AL543_06925 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AL543_18125 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_03650 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_00845 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D AL543_13055 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AL543_16950 peptidase P60 K13695 nlpC; probable lipoprotein NlpC
D AL543_14145 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AL543_06675 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_06685 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AL543_11675 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AL543_14085 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AL543_06365 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D AL543_01570 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS
D AL543_15695 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D AL543_14685 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D AL543_16745 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AL543_10045 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AL543_06040 hemagglutinin K08604 hap; vibriolysin [EC:3.4.24.25]
D AL543_03465 peptidase M4 family protein K01400 nprE; bacillolysin [EC:3.4.24.28]
D AL543_02815 PKD domain-containing protein K09607 ina; immune inhibitor A [EC:3.4.24.-]
D AL543_17555 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D AL543_17845 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AL543_11915 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AL543_07360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AL543_12990 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D AL543_20045 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AL543_02425 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AL543_16070 peptidase M20 K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AL543_18040 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AL543_06230 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AL543_00070 peptidase M23 K08642 lasA; LasA protease [EC:3.4.24.-]
D AL543_01635 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D AL543_06145 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AL543_09240 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AL543_16475 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D AL543_12295 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AL543_14890 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AL543_20095 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D AL543_06105 sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AL543_11970 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AL543_11965 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D AL543_08685 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D AL543_05700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_13875 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_06060 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AL543_12270 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AL543_04910 hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AL543_18890 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AL543_18880 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AL543_16690 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D AL543_09045 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AL543_07125 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AL543_16755 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AL543_01515 protease K08676 tri; tricorn protease [EC:3.4.21.-]
D AL543_19235 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D AL543_14420 protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D AL543_18035 dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21]
D AL543_09015 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D AL543_08220 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AL543_07880 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AL543_10070 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AL543_04450 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D AL543_12820 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D AL543_12380 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D AL543_12385 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D AL543_07545 metalloprotease PmbA K03592 pmbA; PmbA protein
D AL543_11255 metalloprotease TldD K03568 tldD; TldD protein
D AL543_10855 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D AL543_10850 hflK; protease modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vmi01003]
D AL543_17930 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D AL543_12120 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AL543_08035 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AL543_13750 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D AL543_13775 glycosyltransferase family 1 protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D AL543_13785 glycosyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D AL543_10355 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AL543_15790 glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D AL543_03320 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vmi01005]
D AL543_06080 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AL543_06075 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AL543_06775 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AL543_06090 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AL543_18370 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AL543_18535 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AL543_10165 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AL543_10160 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D AL543_18460 DUF2219 domain-containing protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D AL543_10260 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AL543_01250 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AL543_10235 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D AL543_20135 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AL543_18525 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AL543_07495 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AL543_07490 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AL543_10225 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D AL543_10275 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AL543_10285 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D AL543_10230 lipopolysaccharide heptosyltransferase family protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D AL543_20470 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AL543_13660 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AL543_06980 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AL543_10300 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AL543_10305 LPS chain length-determining protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D AL543_10355 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vmi01011]
D AL543_07445 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AL543_10635 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AL543_06795 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AL543_06810 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AL543_06825 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AL543_04265 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AL543_10960 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AL543_08680 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AL543_06815 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AL543_06800 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AL543_11745 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_07250 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AL543_12530 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AL543_08035 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AL543_12120 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AL543_13890 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AL543_06830 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AL543_05700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_13875 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AL543_12270 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AL543_06060 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AL543_01570 LysM peptidoglycan-binding domain-containing protein K19236 ycfS; L,D-transpeptidase YcfS
D AL543_15695 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D AL543_01635 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D AL543_12620 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AL543_06385 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AL543_19060 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AL543_11485 membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D AL543_20540 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AL543_13475 membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D AL543_19360 endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AL543_13880 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AL543_10825 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AL543_06900 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D AL543_01575 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vmi01004]
D AL543_19385 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AL543_19390 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AL543_03310 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AL543_19845 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AL543_19370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AL543_19380 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AL543_16695 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D AL543_06085 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AL543_17980 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_03120 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AL543_03125 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AL543_14435 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AL543_17810 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AL543_04315 hybrid non-ribosomal peptide synthetase/type I polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D AL543_04320 methyltransferase domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D AL543_10500 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AL543_16055 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AL543_05890 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D AL543_07235 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19190 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_06505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_09040 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AL543_19395 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AL543_11725 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AL543_07440 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:vmi01008]
D AL543_04315 hybrid non-ribosomal peptide synthetase/type I polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D AL543_04320 methyltransferase domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D AL543_04295 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-]
D AL543_04310 thiazolinyl imide reductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D AL543_04305 thioesterase K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:vmi01006]
D AL543_13570 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AL543_11365 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AL543_06120 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AL543_10835 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AL543_08210 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AL543_09035 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:vmi01007]
D AL543_20405 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AL543_14110 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AL543_12100 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AL543_11565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_12265 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_01020 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AL543_07975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AL543_18360 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AL543_19685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AL543_14300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AL543_12540 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AL543_07370 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AL543_13915 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AL543_12445 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AL543_15145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AL543_15835 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AL543_13015 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AL543_09620 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AL543_09615 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AL543_14855 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AL543_13505 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AL543_05650 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AL543_13035 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_11835 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_15425 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AL543_15430 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AL543_04725 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AL543_09610 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D AL543_19155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AL543_15815 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AL543_14975 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AL543_00315 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AL543_14870 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AL543_07950 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AL543_05850 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AL543_17385 aminotransferase class III K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AL543_14860 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AL543_12235 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AL543_09665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AL543_04115 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D AL543_11105 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D AL543_15110 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vmi00194]
D AL543_09455 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AL543_09460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AL543_09465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AL543_09470 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AL543_09475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AL543_09480 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AL543_09485 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AL543_09490 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AL543_09495 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vmi03000]
D AL543_00220 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AL543_16465 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D AL543_04335 AraC family transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D AL543_14475 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D AL543_04340 AraC family transcriptional regulator K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D AL543_19710 AraC family transcriptional regulator K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D AL543_05860 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D AL543_01935 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AL543_13600 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AL543_09850 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D AL543_17830 HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D AL543_12515 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D AL543_08040 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AL543_12890 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AL543_11655 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AL543_07240 transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D AL543_14365 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D AL543_18670 HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D AL543_01925 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D AL543_17040 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D AL543_00595 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D AL543_14610 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D AL543_14615 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D AL543_02935 HTH-type transcriptional regulator UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D AL543_06480 DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AL543_02205 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AL543_08230 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D AL543_04695 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D AL543_13665 treR; HTH-type transcriptional regulator TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D AL543_17905 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D AL543_10465 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AL543_15335 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D AL543_18635 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D AL543_06865 pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D AL543_01810 FCD domain-containing protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D AL543_09875 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D AL543_10170 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AL543_12050 TetR/AcrR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D AL543_18010 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D AL543_04200 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AL543_08780 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D AL543_09220 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D AL543_01080 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_18655 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_17865 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_14430 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D AL543_11125 helix-turn-helix transcriptional regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D AL543_00660 LuxR family transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D AL543_01360 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D AL543_17495 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AL543_01710 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AL543_14005 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AL543_10410 zntR; Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D AL543_01655 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D AL543_01560 MerR family DNA-binding transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D AL543_19830 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AL543_10980 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AL543_05705 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D AL543_07930 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AL543_16605 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D AL543_12950 HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AL543_14590 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AL543_12520 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D AL543_19115 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D AL543_08090 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D AL543_10115 MurR/RpiR family transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D AL543_15050 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AL543_11280 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AL543_10640 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AL543_10470 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AL543_12625 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D AL543_04240 SgrR family transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D AL543_19980 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D AL543_12450 sigma-54-dependent Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D AL543_02125 sigma-54-dependent Fis family transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator
D AL543_02435 nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D AL543_00405 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D AL543_01505 transcriptional regulator K07727 K07727; putative transcriptional regulator
D AL543_08250 met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D AL543_01105 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AL543_06315 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D AL543_01305 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AL543_09500 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AL543_14080 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D AL543_11350 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D AL543_14095 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D AL543_19310 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D AL543_00915 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor
D AL543_15890 transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D AL543_10415 transcriptional regulator CadC K03765 cadC; transcriptional activator of cad operon
D AL543_20070 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D AL543_17685 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D AL543_17670 pspC; PspC domain-containing protein K03973 pspC; phage shock protein C
D AL543_04100 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D AL543_08715 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D AL543_13080 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D AL543_05130 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D AL543_11575 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D AL543_12105 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D AL543_06195 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D AL543_06210 Crl family RNA polymerase assembly factor K11926 crl; sigma factor-binding protein Crl
D AL543_00275 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
C 03021 Transcription machinery [BR:vmi03021]
D AL543_07720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AL543_10705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AL543_10710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AL543_08365 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AL543_11695 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AL543_11785 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D AL543_06345 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AL543_14345 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AL543_07150 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AL543_08790 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D AL543_07515 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AL543_19650 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AL543_07405 RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D AL543_12335 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AL543_06170 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AL543_10680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AL543_12015 stringent starvation protein A K03599 sspA; stringent starvation protein A
D AL543_12020 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D AL543_00830 anti-sigma factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D AL543_00835 anti-anti-sigma factor K17762 rsbS; rsbT antagonist protein RsbS
D AL543_07145 anti-sigma E factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D AL543_07140 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D AL543_07135 transcriptional regulator K03803 rseC; sigma-E factor negative regulatory protein RseC
D AL543_12105 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D AL543_12280 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AL543_08420 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D AL543_10555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AL543_00645 transcriptional regulator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vmi03019]
D AL543_19425 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D AL543_11240 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AL543_07120 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AL543_07860 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AL543_10770 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AL543_10545 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D AL543_02740 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_03190 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_16340 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AL543_03055 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AL543_10080 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AL543_12360 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AL543_10555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AL543_08280 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AL543_13420 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AL543_08165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AL543_10840 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AL543_12850 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AL543_12875 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AL543_12095 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AL543_12480 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AL543_11845 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D AL543_11135 RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD
D AL543_08205 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D AL543_06645 ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D AL543_11275 ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D AL543_07530 RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D AL543_16260 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D AL543_12115 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vmi03011]
D AL543_18855 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AL543_06140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AL543_07815 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AL543_07725 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AL543_07760 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AL543_10930 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AL543_10905 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AL543_07775 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AL543_11995 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AL543_07850 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AL543_07730 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AL543_10900 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AL543_07735 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AL543_07780 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AL543_12355 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AL543_11945 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AL543_07800 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AL543_10940 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AL543_07825 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AL543_12525 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AL543_11710 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AL543_10690 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AL543_07830 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AL543_07845 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AL543_07840 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AL543_07785 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AL543_07770 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AL543_10945 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AL543_10695 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AL543_10685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AL543_10700 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AL543_11990 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AL543_07795 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AL543_07750 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AL543_07810 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AL543_07715 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AL543_07765 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AL543_11960 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AL543_05635 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AL543_11370 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AL543_07820 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AL543_07835 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AL543_07790 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AL543_11375 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AL543_10190 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AL543_07805 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AL543_07755 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AL543_13515 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D AL543_08240 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AL543_19400 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AL543_10195 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AL543_09555 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AL543_05640 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AL543_13520 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AL543_07740 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AL543_17460 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AL543_07295 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09360 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_07305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_08640 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11070 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_10600 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_08670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_07330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_10580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_12680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09825 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09365 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_07310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_10595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_08645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vmi03009]
D AL543_07120 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AL543_10770 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AL543_07115 GTPase Era K03595 era; GTPase
D AL543_11380 obgE; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D AL543_12105 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D AL543_12335 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AL543_06170 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AL543_10680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AL543_17435 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AL543_11410 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AL543_09740 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AL543_12220 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D AL543_08810 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AL543_11585 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AL543_16785 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D AL543_09510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AL543_06840 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AL543_12045 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AL543_09210 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D AL543_19275 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D AL543_07855 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AL543_12290 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D AL543_17330 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D AL543_06320 class I SAM-dependent methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D AL543_13895 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AL543_16120 methyltransferase domain-containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AL543_10040 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D AL543_16720 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D AL543_13000 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AL543_07075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AL543_00540 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D AL543_17640 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_07400 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_02060 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_15205 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AL543_19415 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D AL543_12665 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AL543_15005 23S rRNA pseudouridine(2457) synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D AL543_20445 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AL543_12410 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AL543_15895 30S ribosomal protein S5 alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D AL543_06240 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D AL543_18585 N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D AL543_11950 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AL543_07960 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AL543_10480 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AL543_19885 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D AL543_19425 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D AL543_11240 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AL543_11570 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AL543_07685 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D AL543_03055 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AL543_12425 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D AL543_17735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AL543_10765 small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AL543_13030 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D AL543_04650 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D AL543_10845 GTPase HflX K03665 hflX; GTPase
D AL543_14710 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AL543_09785 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AL543_08370 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AL543_12345 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D AL543_12330 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D AL543_04220 urease K14761 rlbA; ribosome-associated protein
D AL543_13900 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AL543_13935 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D AL543_12285 ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D AL543_01355 hypothetical protein K14762 yibL; ribosome-associated protein
D AL543_07550 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D AL543_16700 ribosome modulation factor K03812 rmf; ribosome modulation factor
D AL543_07520 ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D AL543_12650 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D AL543_20185 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D AL543_19405 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vmi03016]
D AL543_07030 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AL543_20405 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AL543_13505 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AL543_12540 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AL543_13915 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AL543_14300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AL543_14110 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AL543_19685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AL543_12445 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AL543_15145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AL543_13035 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_11835 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AL543_15835 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AL543_05650 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AL543_14855 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AL543_18360 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AL543_07370 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AL543_13015 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AL543_15425 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AL543_15430 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AL543_11565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_12265 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_01020 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AL543_07975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AL543_08545 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AL543_18620 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AL543_11500 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AL543_13510 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D AL543_14120 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AL543_12350 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AL543_11765 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D AL543_12955 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AL543_14710 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AL543_09785 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AL543_10835 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AL543_09535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AL543_09515 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AL543_08455 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D AL543_09550 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AL543_06845 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AL543_14155 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D AL543_10145 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AL543_03050 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D AL543_19185 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D AL543_12615 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D AL543_09620 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AL543_09615 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AL543_12100 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AL543_20125 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AL543_13465 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AL543_10985 tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D AL543_10475 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AL543_14835 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D AL543_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AL543_15135 carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D AL543_15130 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D AL543_17885 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D AL543_08695 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D AL543_11955 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AL543_12945 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D AL543_03950 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D AL543_08310 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AL543_12430 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D AL543_01025 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D AL543_13295 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AL543_13560 tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D AL543_17640 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_07400 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_02060 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AL543_14945 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AL543_16595 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AL543_09635 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AL543_20090 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AL543_10895 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D AL543_10890 tusC; sulfurtransferase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D AL543_10885 sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D AL543_16135 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D AL543_12965 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D AL543_07175 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D AL543_18680 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D AL543_19850 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D AL543_12910 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AL543_16180 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AL543_15845 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AL543_16175 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AL543_13630 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AL543_10815 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AL543_12920 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AL543_13590 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AL543_20560 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AL543_01295 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D AL543_19210 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AL543_11715 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AL543_10820 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AL543_06380 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AL543_07860 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AL543_12360 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vmi03012]
D AL543_04275 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D AL543_12340 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AL543_05645 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AL543_07905 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AL543_06135 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AL543_10670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_10915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_06520 elongation factor G K02355 fusA; elongation factor G
D AL543_10910 fusA; elongation factor G K02355 fusA; elongation factor G
D AL543_20155 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AL543_06125 ribosome recycling factor K02838 frr; ribosome recycling factor
D AL543_20150 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AL543_20180 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AL543_17975 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AL543_15350 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D AL543_08140 efp; elongation factor P K02356 efp; elongation factor P
D AL543_08115 elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D AL543_08145 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D AL543_19865 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D AL543_12440 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AL543_12420 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D AL543_02450 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:vmi03110]
D AL543_15025 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AL543_12675 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AL543_18885 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AL543_08215 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AL543_13420 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AL543_12975 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D AL543_16310 molecular chaperone K04046 yegD; hypothetical chaperone protein
D AL543_08165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AL543_13425 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AL543_11430 co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D AL543_12970 co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AL543_08525 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D AL543_13415 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AL543_09605 heat-shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D AL543_08520 heat-shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D AL543_08170 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D AL543_11970 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AL543_12295 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AL543_09490 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AL543_08105 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AL543_08290 cpxP; stress adaptor protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D AL543_01470 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D AL543_17900 molecular chaperone TorD K03533 torD; TorA specific chaperone
D AL543_08685 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D AL543_02805 hemolysin K10948 hlyA; hemolysin
D AL543_20420 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_12175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_03615 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_11315 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AL543_06330 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AL543_18365 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AL543_18870 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D AL543_10875 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D AL543_07705 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D AL543_12550 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D AL543_07885 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AL543_00680 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AL543_11420 peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D AL543_10550 thioredoxin TrxA K03671 TXN; thioredoxin
D AL543_03305 thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AL543_14025 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D AL543_15035 glutaredoxin K03674 grxA; glutaredoxin 1
D AL543_01760 grxB; glutaredoxin, GrxB family K03675 grxB; glutaredoxin 2
D AL543_01840 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D AL543_19540 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AL543_09690 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AL543_18645 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D AL543_06885 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AL543_08330 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D AL543_19575 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D AL543_15625 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vmi04131]
D AL543_12995 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AL543_09625 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AL543_05940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_19260 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_11665 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_19315 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_03520 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vmi04121]
C 03051 Proteasome [BR:vmi03051]
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vmi03032]
D AL543_20525 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AL543_00220 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AL543_10390 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AL543_18875 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AL543_15435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AL543_18850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AL543_09575 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AL543_10955 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AL543_11700 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_06065 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AL543_09580 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AL543_07365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AL543_13905 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AL543_19350 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AL543_20520 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_10505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_15805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_14390 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AL543_12405 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AL543_06070 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AL543_07990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AL543_19790 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D AL543_15590 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AL543_09590 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AL543_06945 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AL543_06950 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AL543_17945 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AL543_19535 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vmi03036]
D AL543_00220 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AL543_07120 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AL543_14955 transcriptional regulator K03746 hns; DNA-binding protein H-NS
D AL543_10390 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AL543_18875 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AL543_15435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AL543_18850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AL543_09575 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AL543_12030 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D AL543_08845 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D AL543_10470 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AL543_10840 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AL543_11655 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AL543_01080 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_18655 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_17865 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AL543_19475 nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D AL543_17870 chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D AL543_17875 chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D AL543_17880 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D AL543_06785 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AL543_11750 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D AL543_08800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AL543_06830 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AL543_18650 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AL543_06835 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AL543_06790 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AL543_06805 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AL543_08795 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AL543_06780 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AL543_13985 cell division protein ZipA K03528 zipA; cell division protein ZipA
D AL543_07200 cell division protein ZapA K09888 zapA; cell division protein ZapA
D AL543_08270 cell division protein ZapB K09892 zapB; cell division protein ZapB
D AL543_16725 cell division protein ZapC K18657 zapC; cell division protein ZapC
D AL543_06935 cell division protein ZapD K18778 zapD; cell division protein ZapD
D AL543_11980 cell division protein ZapE K06916 zapE; cell division protein ZapE
D AL543_07700 lysine transporter LysM K07269 ytfB; cell division protein YtfB
D AL543_10825 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AL543_09870 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_13715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_19070 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AL543_19075 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AL543_19080 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AL543_15265 helicase K13053 sulA; cell division inhibitor SulA
D AL543_10170 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AL543_19790 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D AL543_11220 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AL543_11225 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AL543_11230 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AL543_13885 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AL543_19625 ParA family protein K03496 parA; chromosome partitioning protein
D AL543_09505 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D AL543_01310 ParA family protein K03496 parA; chromosome partitioning protein
D AL543_01305 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AL543_09500 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AL543_06945 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AL543_06950 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AL543_09515 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AL543_09510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AL543_08890 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AL543_06890 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AL543_14305 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AL543_13150 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D AL543_08975 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vmi03400]
D AL543_01940 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AL543_01565 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AL543_06610 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AL543_11495 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AL543_14175 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AL543_06750 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AL543_02020 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AL543_03030 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AL543_11510 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AL543_01935 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AL543_17660 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AL543_10205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AL543_18425 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AL543_06615 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AL543_06880 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AL543_13990 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AL543_08985 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AL543_11115 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AL543_14220 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AL543_15375 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AL543_10050 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AL543_10705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AL543_10710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AL543_07720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AL543_08365 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AL543_18575 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AL543_11790 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AL543_10830 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D AL543_12475 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D AL543_15485 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AL543_13045 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AL543_13575 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AL543_06065 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AL543_09580 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AL543_07365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AL543_13905 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AL543_19350 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AL543_20520 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_10505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_15805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AL543_14390 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AL543_12405 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_07990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AL543_06415 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AL543_06420 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D AL543_06410 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AL543_11825 recA; recombinase RecA K03553 recA; recombination protein RecA
D AL543_18350 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AL543_18345 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AL543_18355 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AL543_08235 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AL543_10935 primosomal replication protein N K02686 priB; primosomal replication protein N
D AL543_18410 prepilin peptidase K04067 priC; primosomal replication protein N''
D AL543_04685 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D AL543_04690 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D AL543_06525 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AL543_09585 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AL543_08375 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AL543_07110 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AL543_14400 recombination protein RecR K06187 recR; recombination protein RecR
D AL543_13405 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AL543_12825 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D AL543_17440 ATP-dependent helicase K19789 radD; DNA repair protein RadD
D AL543_15590 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AL543_09590 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AL543_17945 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AL543_10390 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AL543_18875 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AL543_10470 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AL543_15435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AL543_18850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AL543_10080 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AL543_14955 transcriptional regulator K03746 hns; DNA-binding protein H-NS
D AL543_06265 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AL543_09045 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AL543_15365 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D AL543_11830 recombination regulator RecX K03565 recX; regulatory protein
D AL543_09880 DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D AL543_03460 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D AL543_19215 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AL543_18400 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AL543_17115 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_15580 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AL543_17110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AL543_15575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vmi03029]
D AL543_12005 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AL543_12340 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AL543_05645 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AL543_06135 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AL543_10670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_10915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_06520 elongation factor G K02355 fusA; elongation factor G
D AL543_10910 fusA; elongation factor G K02355 fusA; elongation factor G
D AL543_07115 GTPase Era K03595 era; GTPase
D AL543_11565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_12265 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AL543_13915 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AL543_15145 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AL543_19685 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AL543_11130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AL543_06100 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AL543_13420 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AL543_13415 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AL543_08165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AL543_08170 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D AL543_13425 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AL543_12955 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AL543_12970 co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AL543_19540 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AL543_14305 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AL543_09540 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AL543_01475 SCO family protein K07152 SCO1; protein SCO1
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vmi02000]
D AL543_18540 lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AL543_01745 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AL543_04285 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AL543_04290 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AL543_01150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AL543_15210 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AL543_15215 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AL543_16710 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D AL543_11800 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AL543_11805 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AL543_11810 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AL543_11815 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AL543_03425 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AL543_03430 molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AL543_03435 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AL543_16900 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D AL543_16905 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D AL543_16910 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D AL543_04120 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_12150 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_03730 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D AL543_04130 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D AL543_12155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AL543_03725 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AL543_04125 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_12160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_03720 fbpC; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AL543_07565 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D AL543_07560 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D AL543_07555 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D AL543_01300 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16550 potD; spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16555 potD; spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_12640 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AL543_16560 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D AL543_16565 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D AL543_16570 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AL543_19005 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AL543_18990 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AL543_18995 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AL543_18985 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AL543_17620 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D AL543_17625 thiamine ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein
D AL543_17630 ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D AL543_00630 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AL543_00625 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D AL543_00620 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D AL543_00635 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AL543_01860 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AL543_18515 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AL543_15985 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AL543_15995 galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D AL543_15990 galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D AL543_02985 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_02195 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D AL543_08410 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D AL543_02980 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_02190 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_08400 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AL543_08405 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AL543_02185 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AL543_17020 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AL543_17025 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AL543_17030 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AL543_17035 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AL543_07465 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AL543_07470 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AL543_07475 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AL543_07460 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AL543_07455 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AL543_03040 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_01590 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_12840 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AL543_01595 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AL543_12855 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D AL543_01600 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AL543_12860 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AL543_01605 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AL543_12865 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AL543_03235 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D AL543_03245 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D AL543_03240 ABC transporter K09999 artQ; arginine transport system permease protein
D AL543_03230 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D AL543_16160 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AL543_16155 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D AL543_16150 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D AL543_16145 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AL543_18440 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D AL543_18430 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D AL543_18435 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein
D AL543_18445 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D AL543_13645 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D AL543_13650 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AL543_13655 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AL543_14815 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D AL543_14820 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D AL543_14825 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D AL543_09570 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AL543_09565 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D AL543_09560 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D AL543_00880 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AL543_04215 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AL543_07970 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AL543_00875 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AL543_00885 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AL543_00870 glnQ; amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AL543_14765 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D AL543_14770 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D AL543_14775 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D AL543_14780 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D AL543_00785 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_14785 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D AL543_17690 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AL543_17695 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D AL543_17700 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D AL543_17705 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AL543_17710 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D AL543_09925 nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_01230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_05730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_12210 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AL543_05725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_09930 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_01235 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_12205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AL543_05720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_09935 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_01240 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_12200 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AL543_12195 sugar ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_05715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_09920 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_01245 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_18705 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AL543_12190 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AL543_18700 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AL543_04170 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AL543_18710 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AL543_04175 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D AL543_18720 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein
D AL543_04180 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AL543_18715 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AL543_04185 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AL543_14520 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AL543_10105 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AL543_10110 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AL543_14515 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AL543_10100 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AL543_14525 iron ABC transporter substrate-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AL543_00450 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D AL543_00455 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D AL543_00460 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D AL543_02830 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D AL543_02840 ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein
D AL543_02835 siderophore ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D AL543_02845 siderophore ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D AL543_06710 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D AL543_15525 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D AL543_15530 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D AL543_19715 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AL543_19725 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D AL543_19720 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AL543_07355 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AL543_07350 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AL543_07510 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AL543_18555 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D AL543_18565 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AL543_18560 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AL543_19590 ccmD; heme exporter CcmD K02196 ccmD; heme exporter protein D
D AL543_19595 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D AL543_19600 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AL543_19605 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AL543_08795 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AL543_08800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AL543_12075 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AL543_17300 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AL543_17305 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AL543_17600 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AL543_17595 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AL543_12070 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AL543_05990 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_03135 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_07640 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_17095 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_17100 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_17405 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AL543_05995 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AL543_03130 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AL543_07635 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AL543_17105 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AL543_17410 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AL543_17145 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AL543_15925 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D AL543_01420 Anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D AL543_10755 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D AL543_12505 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D AL543_16970 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D AL543_05870 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AL543_09055 MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump
D AL543_17415 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AL543_08200 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AL543_00855 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AL543_12375 multidrug efflux protein K26937 dinF; MATE family, multidrug efflux pump
D AL543_04470 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D AL543_10520 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D AL543_02230 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D AL543_03525 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AL543_03735 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AL543_14605 MFS transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D AL543_06335 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AL543_09230 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AL543_17430 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AL543_02785 multidrug transporter EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D AL543_00020 multidrug transporter MdtL K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D AL543_17350 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D AL543_03300 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D AL543_04325 MFS transporter K05373 ybtX; MFS transporter, putative signal transducer
D AL543_13960 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AL543_12485 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D AL543_13965 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AL543_07535 phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D AL543_04700 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D AL543_13955 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AL543_19340 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_18500 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AL543_14105 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_09310 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AL543_02880 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AL543_13670 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AL543_10130 PTS N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D AL543_18190 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D AL543_04710 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AL543_18245 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D AL543_18240 PTS fructose transporter subunit IIA K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D AL543_18195 PTS fructose transporter subunit IIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D AL543_00905 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AL543_03605 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_15770 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AL543_03595 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_15760 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AL543_03600 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_15765 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D AL543_14645 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D AL543_14630 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D AL543_14635 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D AL543_14640 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D AL543_02295 cmtB; PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02925 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AL543_02290 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02930 PTS ascorbate transporter subunit IIC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AL543_02285 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D AL543_18250 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AL543_07525 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AL543_03350 aquaporin K02440 glpF; glycerol uptake facilitator
D AL543_02490 potassium channel protein K10716 kch; voltage-gated potassium channel
D AL543_06995 capsular biosynthesis protein K10716 kch; voltage-gated potassium channel
D AL543_19455 ion transporter K10716 kch; voltage-gated potassium channel
D AL543_12145 ammonium transporter K03320 amt; ammonium transporter, Amt family
D AL543_16820 ammonium transporter K03320 amt; ammonium transporter, Amt family
D AL543_12015 stringent starvation protein A K03599 sspA; stringent starvation protein A
D AL543_02380 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D AL543_02385 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D AL543_16140 BAX inhibitor (BI)-1/YccA family protein K19416 yccA; modulator of FtsH protease
D AL543_17775 focA; formate transporter FocA K06212 focA; formate transporter
D AL543_04530 focA; formate transporter FocA K06212 focA; formate transporter
D AL543_04070 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D AL543_11640 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D AL543_10365 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D AL543_17575 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D AL543_05835 magnesium transporter K06213 mgtE; magnesium transporter
D AL543_07540 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D AL543_13580 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D AL543_13585 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AL543_07870 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D AL543_14160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D AL543_00440 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AL543_17000 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AL543_17005 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AL543_16995 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AL543_18315 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D AL543_18310 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D AL543_06465 zinc transporter ZntB K16074 zntB; zinc transporter
D AL543_09275 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D AL543_05920 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_10385 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_11930 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_18390 porin K16076 nmpC; outer membrane porin protein LC
D AL543_12275 porin K08720 ompU; outer membrane protein OmpU
D AL543_01890 maltoporin LamB K02024 lamB; maltoporin
D AL543_20400 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AL543_14330 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D AL543_14335 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D AL543_06355 hypothetical protein K05517 tsx; nucleoside-specific channel-forming protein
D AL543_08690 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D AL543_04330 TonB-dependent receptor K15721 fyuA; pesticin/yersiniabactin receptor
D AL543_11620 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AL543_12765 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AL543_02855 TonB-dependent siderophore receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AL543_10095 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AL543_14490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AL543_10440 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_17365 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D AL543_13825 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D AL543_06100 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AL543_13025 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D AL543_20060 outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D AL543_12660 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D AL543_13400 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D AL543_07610 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D AL543_07605 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D AL543_07505 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D AL543_07500 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D AL543_11425 LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D AL543_13910 luciferase K03643 lptE; LPS-assembly lipoprotein
D AL543_13820 TetR family transcriptional regulator K20920 vpsM; polysaccharide biosynthesis protein VpsM
D AL543_02805 hemolysin K10948 hlyA; hemolysin
D AL543_13930 magnesium/cobalt transporter CorC K06189 corC; hemolysin (HlyC) family protein
D AL543_15480 hypothetical protein K06518 cidA; holin-like protein
D AL543_19815 CidA/LrgA family protein K06518 cidA; holin-like protein
D AL543_01040 putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D AL543_10420 cadB; amino acid permease K03757 cadB; cadaverine:lysine antiporter
D AL543_11360 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D AL543_05955 L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter
D AL543_08285 cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D AL543_02995 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D AL543_09865 transporter K18138 acrB; multidrug efflux pump
D AL543_12255 AcrB/AcrD/AcrF family protein K18989 vexF; multidrug efflux pump
D AL543_14570 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AL543_14575 ligand-binding protein SH3 K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AL543_16325 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AL543_18230 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D AL543_00950 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D AL543_15910 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D AL543_10075 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AL543_14150 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D AL543_10450 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AL543_00400 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AL543_00115 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AL543_08325 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D AL543_02745 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D AL543_00795 L-lactate permease K03303 lutP; lactate permease
D AL543_04820 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D AL543_07485 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D AL543_01095 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D AL543_08350 cation acetate symporter K14393 actP; cation/acetate symporter
D AL543_01465 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D AL543_01490 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D AL543_17395 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D AL543_18640 sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D AL543_19465 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D AL543_14960 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D AL543_02780 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D AL543_08340 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D AL543_11090 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D AL543_07895 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D AL543_07900 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D AL543_09420 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D AL543_09730 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D AL543_09735 Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D AL543_20120 uracil permease K02824 uraA; uracil permease
D AL543_08380 xanthine permease XanP K16345 xanP; xanthine permease XanP
D AL543_06225 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AL543_07040 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein
D AL543_03175 amino acid permease K03834 tyrP; tyrosine-specific transport protein
D AL543_02315 transposase K03835 mtr; tryptophan-specific transport protein
D AL543_15855 septum formation protein K03837 sdaC; serine transporter
D AL543_17585 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D AL543_19120 benzoate transporter K05782 benE; benzoate membrane transport protein
D AL543_04660 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D AL543_06495 chorismate-binding protein K07240 chrA; chromate transporter
D AL543_19430 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AL543_01625 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D AL543_12065 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AL543_18925 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D AL543_18920 C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AL543_18915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AL543_18045 C4-dicarboxylate ABC transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D AL543_03800 anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D AL543_12530 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AL543_01415 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D AL543_16450 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D AL543_15465 AEC family transporter K24180 mleP; malate permease and related proteins
D AL543_11650 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AL543_08855 homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D AL543_18975 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D AL543_10060 LysE family translocator K05835 rhtC; threonine efflux protein
D AL543_05950 LysE family translocator K05835 rhtC; threonine efflux protein
D AL543_01725 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D AL543_01720 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D AL543_16010 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_18175 tripartite tricarboxylate transporter protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_16380 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D AL543_16015 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_16375 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_18170 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AL543_16020 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_18165 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_16370 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AL543_20085 AI-2E family transporter K03548 perM; putative permease
D AL543_08355 VUT family protein K09125 yhhQ; queuosine precursor transporter
D AL543_19450 MarC family protein K05595 marC; multiple antibiotic resistance protein
D AL543_06805 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AL543_09625 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AL543_00435 energy transducer TonB K03832 tonB; periplasmic protein TonB
D AL543_16990 energy transducer TonB K03832 tonB; periplasmic protein TonB
D AL543_18295 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D AL543_18305 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D AL543_18300 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D AL543_13240 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_11900 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AL543_11895 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D AL543_13245 oadA; oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D AL543_13250 sodium pump decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AL543_11890 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AL543_17755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AL543_17760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AL543_17900 molecular chaperone TorD K03533 torD; TorA specific chaperone
D AL543_03000 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D AL543_01135 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D AL543_18015 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D AL543_09870 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_13715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_12250 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D AL543_13830 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D AL543_18805 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator
D AL543_02210 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D AL543_19705 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D AL543_19700 Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B
D AL543_19695 iron transporter FeoC K10123 feoC; putative ferrous iron transport protein C
D AL543_09180 universal stress protein B K06144 uspB; universal stress protein B
D AL543_19580 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D AL543_15620 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D AL543_15945 MipA/OmpV family protein K07274 mipA; MipA family protein
D AL543_17550 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vmi02044]
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_01150 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AL543_01135 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D AL543_17365 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D AL543_07025 general secretion pathway protein GspA K02450 gspA; general secretion pathway protein A
D AL543_07020 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D AL543_08515 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D AL543_08510 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D AL543_08505 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AL543_08500 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D AL543_08495 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D AL543_08490 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AL543_08485 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D AL543_08480 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D AL543_08475 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D AL543_08470 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D AL543_08465 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D AL543_08460 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D AL543_06925 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AL543_06910 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D AL543_06915 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D AL543_06920 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D AL543_13430 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D AL543_17320 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AL543_08030 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D AL543_08025 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D AL543_08020 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D AL543_08015 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D AL543_08010 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D AL543_11550 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AL543_11555 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D AL543_13450 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D AL543_13440 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D AL543_13435 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D AL543_14115 hypothetical protein K08086 fimV; pilus assembly protein FimV
D AL543_18125 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_03650 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_18115 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_03660 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_18110 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D AL543_03665 general secretion pathway protein GspD K02280 cpaC; pilus assembly protein CpaC
D AL543_18085 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_03675 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_18080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AL543_03680 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AL543_18075 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AL543_03685 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AL543_18070 type II secretion system F family protein K12511 tadC; tight adherence protein C
D AL543_03690 type II secretion system F family protein K12511 tadC; tight adherence protein C
D AL543_03695 pilus assembly protein TadD K12512 tadD; tight adherence protein D
D AL543_03700 pilus assembly protein K12513 tadE; tight adherence protein E
D AL543_03705 pilus assembly protein TadF K12514 tadF; tight adherence protein F
D AL543_03710 pilus assembly protein TadG K12515 tadG; tight adherence protein G
D AL543_18135 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D AL543_03655 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AL543_11190 MSHA biogenesis protein MshA K10924 mshA; MSHA pilin protein MshA
D AL543_11185 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB
D AL543_11195 type II secretion system protein K10926 mshC; MSHA pilin protein MshC
D AL543_11200 type II secretion system protein K10927 mshD; MSHA pilin protein MshD
D AL543_11170 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D AL543_11180 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D AL543_11175 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D AL543_11140 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D AL543_11145 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D AL543_11150 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D AL543_11155 pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D AL543_11160 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D AL543_11165 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D AL543_11205 prepilin-type N-terminal cleavage/methylation domain-containing protein K12285 mshO; MSHA biogenesis protein MshO
D AL543_11210 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D AL543_11215 MSHA biogenesis protein MshQ K12287 mshQ; MSHA biogenesis protein MshQ
D AL543_11535 YggT family protein K02221 yggT; YggT family protein
D AL543_18865 competence protein ComEA K02237 comEA; competence protein ComEA
D AL543_05930 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AL543_18545 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D AL543_19665 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AL543_19895 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AL543_19960 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AL543_19950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AL543_19945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AL543_19920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AL543_19915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AL543_19910 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AL543_19905 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AL543_19900 flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AL543_06885 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AL543_13095 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AL543_13105 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D AL543_02140 icmF; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D AL543_02115 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK
D AL543_02110 type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D AL543_02095 type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D AL543_02090 vasA; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D AL543_02080 type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D AL543_02075 type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D AL543_01380 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D AL543_16480 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D AL543_01385 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_16485 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_02150 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D AL543_02085 type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein
D AL543_02105 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D AL543_02120 clpV; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D AL543_02135 type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ
D AL543_02145 type VI secretion protein K11911 vasL; type VI secretion system protein VasL
D AL543_02100 type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI
D AL543_02130 type VI secretion system-associated protein TagO K11909 vasI; type VI secretion system protein VasI
D AL543_06755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AL543_08105 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AL543_03585 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_12930 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AL543_10675 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AL543_03590 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_12935 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AL543_12315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AL543_07745 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AL543_11940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AL543_08805 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AL543_12925 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AL543_09540 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AL543_09070 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AL543_09065 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AL543_09060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vmi02042]
D AL543_06425 C4-dicarboxylate ABC transporter K11041 eta; exfoliative toxin A/B
D AL543_02805 hemolysin K10948 hlyA; hemolysin
D AL543_05920 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_10385 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_11930 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AL543_09720 hemolysin III family protein K11068 hlyIII; hemolysin III
D AL543_02800 thermolabile hemolysin K11018 tlh; thermolabile hemolysin
D AL543_17555 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vmi02022]
D AL543_12835 two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AL543_12830 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AL543_08385 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AL543_08390 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AL543_15950 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_13685 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AL543_15955 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D AL543_08300 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AL543_08295 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AL543_01260 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AL543_01265 two-component system response regulator BasR K07666 qseB; two-component system, OmpR family, response regulator QseB
D AL543_03515 torS; hybrid sensor histidine kinase/response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D AL543_17895 two-component system response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D AL543_06660 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AL543_06655 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D AL543_17450 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AL543_18505 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AL543_15740 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D AL543_03785 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D AL543_03790 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D AL543_03740 signal transduction histidine-protein kinase/phosphatase UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AL543_03745 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D AL543_07080 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AL543_15370 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AL543_17570 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AL543_15735 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AL543_13235 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AL543_13230 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D AL543_01960 DNA-binding response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D AL543_17280 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AL543_17275 two-component system response regulator K02475 K02475; two-component system, CitB family, response regulator
D AL543_12595 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AL543_12590 two-component system response regulator YehT K02477 K02477; two-component system, LytTR family, response regulator
D AL543_08580 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AL543_08585 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AL543_03540 HAMP domain-containing protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D AL543_03545 sigma-54-dependent Fis family transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D AL543_18905 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AL543_18910 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AL543_02250 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AL543_16890 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AL543_14735 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AL543_01215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_19635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_15935 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_19645 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_14725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01185 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_19630 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_20355 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_19305 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_00685 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_17265 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_03400 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D AL543_04680 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D AL543_14230 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D AL543_14225 sigma-54-dependent Fis family transcriptional regulator K10912 luxO; two-component system, repressor protein LuxO
D AL543_19975 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D AL543_19970 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D AL543_16530 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D AL543_14715 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D AL543_01170 two-component system sensor histidine kinase/response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D AL543_12215 HAMP domain-containing protein K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vmi02035]
D AL543_01215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_19635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AL543_01205 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_01210 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19615 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_19620 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AL543_10975 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D AL543_14730 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D AL543_01190 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AL543_20350 chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_01195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AL543_01185 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_19630 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AL543_15935 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_01220 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_19645 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_14725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AL543_19640 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AL543_20355 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_19305 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_00685 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_17265 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AL543_10430 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_20080 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15800 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_15920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_06990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_16945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_11460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_04560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01180 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_00770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_01870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_05710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AL543_03825 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_09100 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_00850 PAS domain S-box protein K03776 aer; aerotaxis receptor
D AL543_19950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AL543_19945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AL543_19940 flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D AL543_19915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AL543_19910 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AL543_19905 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AL543_19900 flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AL543_19665 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AL543_19895 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AL543_19955 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AL543_19925 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AL543_19920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AL543_19960 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AL543_20300 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AL543_20360 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AL543_20305 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AL543_09020 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D AL543_19930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D AL543_19965 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AL543_19935 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D AL543_20335 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AL543_20330 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AL543_20325 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D AL543_20315 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AL543_20310 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AL543_20295 flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AL543_20320 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D AL543_20290 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AL543_20285 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AL543_20370 molecular chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D AL543_20385 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT
D AL543_20380 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D AL543_20375 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP
D AL543_07870 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D AL543_14160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D AL543_20280 flagellin K02406 fliC; flagellin
D AL543_20005 flagellin B K02406 fliC; flagellin
D AL543_20010 flagellin K02406 fliC; flagellin
D AL543_20015 flagellin K02406 fliC; flagellin
D AL543_20270 flagellin K02406 fliC; flagellin
D AL543_19995 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D AL543_19985 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D AL543_19650 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AL543_13580 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D AL543_13585 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AL543_19980 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D AL543_19975 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D AL543_19970 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D AL543_20365 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AL543_20000 flagellar biosynthesis protein FlaG K06603 flaG; flagellar protein FlaG
D AL543_19990 flagellar protein FliT K06604 flaI; flagellar protein FlaI
D AL543_19660 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D AL543_19655 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D AL543_11550 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AL543_11555 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D AL543_06910 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D AL543_06915 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D AL543_06920 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D AL543_06925 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AL543_17320 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AL543_08010 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D AL543_08015 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D AL543_08020 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D AL543_08025 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D AL543_08030 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D AL543_13450 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D AL543_13440 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D AL543_13430 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D AL543_18135 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D AL543_03655 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AL543_18125 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_03650 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AL543_18115 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_03660 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AL543_18110 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D AL543_03665 general secretion pathway protein GspD K02280 cpaC; pilus assembly protein CpaC
D AL543_18085 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_03675 type II secretion protein K02282 cpaE; pilus assembly protein CpaE
D AL543_18080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AL543_03680 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vmi04812]
D AL543_11220 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AL543_06780 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AL543_06785 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AL543_19070 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AL543_19075 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AL543_19080 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AL543_19625 ParA family protein K03496 parA; chromosome partitioning protein
D AL543_09505 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D AL543_01310 ParA family protein K03496 parA; chromosome partitioning protein
D AL543_01305 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AL543_09500 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vmi04147]
D AL543_14060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AL543_07050 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AL543_05940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_19260 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AL543_11630 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AL543_11665 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_19315 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_03520 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AL543_06330 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AL543_12885 peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D AL543_08165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AL543_13420 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AL543_10970 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AL543_13050 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AL543_10670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_10915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AL543_18620 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AL543_07235 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_19190 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_06505 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AL543_12505 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D AL543_03625 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AL543_14065 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AL543_14385 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AL543_08060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AL543_08065 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AL543_07585 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AL543_17225 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AL543_01375 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AL543_03355 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AL543_08570 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AL543_08995 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AL543_16075 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AL543_05880 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AL543_07220 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_03980 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AL543_10405 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AL543_06850 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_08050 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AL543_00365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AL543_08195 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:vmi02048]
D AL543_08765 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AL543_08750 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AL543_09330 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AL543_08745 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AL543_09345 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AL543_07990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AL543_02515 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AL543_05215 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D AL543_00220 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AL543_05030 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D AL543_05025 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD
D AL543_05490 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D AL543_05495 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D AL543_09945 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AL543_17670 pspC; PspC domain-containing protein K03973 pspC; phage shock protein C
D AL543_17675 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D AL543_05515 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D AL543_05405 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D AL543_05510 plasmid maintenance protein CcdB K19164 ccdA; antitoxin CcdA
D AL543_05400 plasmid maintenance protein CcdB K19164 ccdA; antitoxin CcdA
D AL543_05300 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D AL543_05100 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D AL543_05455 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D AL543_05500 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D AL543_05450 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D AL543_05295 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D AL543_04850 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D AL543_05240 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D AL543_05385 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D AL543_05095 type II toxin-antitoxin system Phd/YefM family antitoxin K19165 phd; antitoxin Phd
D AL543_05285 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D AL543_05280 higA; transcriptional regulator K21498 higA-1; antitoxin HigA-1
D AL543_17050 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA
D AL543_06780 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AL543_11220 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AL543_06945 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AL543_06950 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AL543_20405 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AL543_07170 succinate dehydrogenase assembly factor 2 family protein K09159 cptB; antitoxin CptB
D AL543_12955 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:vmi01504]
D AL543_14960 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D AL543_02780 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D AL543_14545 fatty acid--CoA ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AL543_14550 acyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AL543_09870 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_13715 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AL543_09865 transporter K18138 acrB; multidrug efflux pump
D AL543_18015 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D AL543_14005 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AL543_06975 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D AL543_17090 TolC family protein K12340 tolC; outer membrane protein
D AL543_17495 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vmi03100]
D AL543_08650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_09400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_10590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_12685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AL543_11865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_09890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_19030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_20390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AL543_11435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_11445 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_14215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_11465 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AL543_09355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_11075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_12700 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_08635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_10605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AL543_03225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_03285 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_15385 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AL543_20205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20250 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20260 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20220 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_20230 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AL543_07325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_08665 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_09820 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_09380 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AL543_10660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_15390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10780 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_10800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_15400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_04455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AL543_09895 tRNA-His K14226 tRNA-His; tRNA His
D AL543_09905 tRNA-His K14226 tRNA-His; tRNA His
D AL543_11030 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_10585 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_11055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AL543_03280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_12320 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_07340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_15395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_20235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AL543_07320 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_08660 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_09375 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AL543_12325 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20190 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20210 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10805 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10810 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_11690 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_10795 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_20240 tRNA-Met K14230 tRNA-Met; tRNA Met
D AL543_11455 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_11470 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_11480 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AL543_09910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_19490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_09900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_20430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AL543_09835 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_11850 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_11860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_18185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_19495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AL543_10665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_07300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_10650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_11450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AL543_08630 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AL543_10655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13710 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13700 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_13705 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AL543_07315 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_09370 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_17245 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_08655 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_17240 tRNA-Val K14237 tRNA-Val; tRNA Val
D AL543_08670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_07330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_10580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_11050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_12680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AL543_09825 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09365 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_09395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_07310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_10595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_11065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_08645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AL543_07295 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09360 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_07305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_08640 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_09390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_11070 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_10600 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AL543_14460 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AL543_06845 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AL543_13380 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AL543_00110 KR domain-containing protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D AL543_00090 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D AL543_01075 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D AL543_14595 gap; type I glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D AL543_19230 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D AL543_11905 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AL543_00945 NADPH-dependent oxidoreductase K03206 azr; azobenzene reductase [EC:1.7.1.6]
D AL543_07615 peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AL543_04060 peptide-methionine (R)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D AL543_19255 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AL543_15495 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AL543_04210 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AL543_14790 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AL543_00410 cytochrome B6 K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AL543_20075 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AL543_01705 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AL543_20020 deferrochelatase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D AL543_00745 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AL543_02440 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D AL543_09185 H-type ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D AL543_20100 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AL543_04730 anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D AL543_18470 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D AL543_11265 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D AL543_19515 KR domain-containing protein K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D AL543_11775 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AL543_14915 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AL543_00430 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D AL543_16060 N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D AL543_05270 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AL543_05915 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AL543_13925 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AL543_12400 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D AL543_15420 N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D AL543_17965 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AL543_17970 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D AL543_05765 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D AL543_18775 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D AL543_16935 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AL543_19170 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AL543_08875 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AL543_12495 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AL543_06275 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AL543_00095 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D AL543_00815 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AL543_06985 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AL543_18930 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AL543_09990 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D AL543_18965 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AL543_18320 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AL543_15195 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AL543_19670 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D AL543_13220 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AL543_16095 HD domain-containing protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AL543_11590 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D AL543_09000 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AL543_19345 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AL543_06585 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AL543_19795 histidine kinase K01175 ybfF; esterase [EC:3.1.-.-]
D AL543_06215 esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-]
D AL543_02670 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AL543_05770 glycosyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D AL543_14680 chitinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D AL543_03560 chitinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D AL543_11290 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D AL543_02280 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AL543_09750 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AL543_15755 dehydrogenase K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D AL543_11250 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AL543_17185 ASCH domain-containing protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D AL543_07435 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AL543_07000 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D AL543_19410 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D AL543_02400 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AL543_03215 DUF3763 domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AL543_00100 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D AL543_02475 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AL543_05760 hypothetical protein K19049 cslA; chondroitin AC lyase [EC:4.2.2.5]
D AL543_04110 aspartate aminotransferase family protein K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D AL543_06370 csdA; SufS family cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D AL543_04580 N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D AL543_02960 L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D AL543_00105 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D AL543_07575 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D AL543_16980 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D AL543_14190 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D AL543_14195 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D AL543_14200 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D AL543_06310 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D AL543_06305 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D AL543_06300 NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D AL543_06295 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D AL543_06290 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D AL543_06285 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D AL543_16620 cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AL543_14280 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D AL543_12110 DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D AL543_03510 torT; TMAO reductase system periplasmic protein TorT K11930 torT; periplasmic protein TorT
D AL543_12905 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D AL543_03250 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D AL543_16875 sufurtransferase FdhD K02379 fdhD; FdhD protein
D AL543_12980 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D AL543_13300 ferredoxin K05524 fdxA; ferredoxin
D AL543_15570 (2Fe-2S)-binding protein K11107 yfaE; ferredoxin
D AL543_14185 electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D AL543_14180 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D AL543_14205 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D AL543_09520 FMN-binding protein MioC K06205 mioC; MioC protein
D AL543_06895 flavodoxin FldB K03840 fldB; flavodoxin II
D AL543_12960 Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D AL543_00355 cytochrome b562 family protein K15536 cybC; soluble cytochrome b562
D AL543_03775 mycothiol reductase K02570 napD; periplasmic nitrate reductase NapD
D AL543_03780 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D AL543_17765 torE; trimethylamine N-oxide reductase system protein TorE K02571 napE; periplasmic nitrate reductase NapE
D AL543_15630 nrfF; cytochrome c-type biogenesis protein CcmH K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D AL543_15595 cytochrome C heme lyase K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D AL543_19805 flavodoxin FldA K03839 fldA; flavodoxin I
D AL543_03760 cytochrome C K02569 napC; cytochrome c-type protein NapC
D AL543_15605 cytochrome c nitrite reductase pentaheme subunit K04013 nrfB; cytochrome c-type protein NrfB
D AL543_15610 nrfC; cytochrome c nitrite reductase Fe-S protein K04014 nrfC; protein NrfC
D AL543_15615 nrfD; cytochrome c nitrite reductase subunit NrfD K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D AL543_17120 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D AL543_13980 sulfate transporter CysZ K06203 cysZ; CysZ protein
D AL543_00330 VOC family protein K08234 yaeR; glyoxylase I family protein
D AL543_11545 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AL543_18845 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D AL543_18840 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D AL543_10280 glycosyl transferase K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D AL543_08945 heme biosynthesis protein HemY K02498 hemY; HemY protein
D AL543_09075 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D AL543_09080 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D AL543_09860 cytoplasmic protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D AL543_12395 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D AL543_13525 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D AL543_13460 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D AL543_01930 DoxX family protein K15977 K15977; putative oxidoreductase
D AL543_20490 DoxX family protein K15977 K15977; putative oxidoreductase
D AL543_04255 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AL543_02345 cold-shock protein CspA K03704 cspA; cold shock protein
D AL543_02445 cold-shock protein K03704 cspA; cold shock protein
D AL543_15015 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein
D AL543_00565 cold-shock protein K03704 cspA; cold shock protein
D AL543_15640 cold-shock protein K03704 cspA; cold shock protein
D AL543_10715 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D
D AL543_12140 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D AL543_08425 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D AL543_17615 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D AL543_15020 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AL543_18895 trigger factor K03545 tig; trigger factor
D AL543_13385 SsrA-binding protein K03664 smpB; SsrA-binding protein
D AL543_17125 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D AL543_09680 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D AL543_00650 SM-20 protein K07394 K07394; SM-20-related protein
D AL543_05925 OsmC family protein K07397 yhfA; putative redox protein
D AL543_08445 iron-sulfur cluster biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D AL543_14045 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D AL543_14445 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D AL543_13610 flap endonuclease Xni K01146 xni; protein Xni
D AL543_10185 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D AL543_08730 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AL543_09090 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D AL543_04515 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D AL543_13065 DUF2813 domain-containing protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D AL543_05425 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D AL543_12035 YraN family protein K07460 yraN; putative endonuclease
D AL543_03385 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D AL543_09760 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D AL543_14850 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D AL543_09770 DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D AL543_13085 hypothetical protein K07505 repA; regulatory protein RepA
D AL543_05430 IS30 family transposase K07482 K07482; transposase, IS30 family
D AL543_00860 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_05630 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_13180 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_17745 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_17750 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_17940 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_01255 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_11645 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_01865 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_06445 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_15405 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_12655 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_02055 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_14210 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_18685 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_03930 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D AL543_20585 DUF3596 domain-containing protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D AL543_17680 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D AL543_02035 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D AL543_14395 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AL543_15750 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D AL543_14075 dipeptide/tripeptide permease DtpA K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AL543_07010 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D AL543_11310 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D AL543_17645 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AL543_19330 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AL543_06250 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AL543_13195 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AL543_16510 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AL543_06595 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AL543_12435 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AL543_06580 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D AL543_19050 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D AL543_02420 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D AL543_01950 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D AL543_15030 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D AL543_17805 septation protein A K06190 ispZ; intracellular septation protein
D AL543_03155 allophanate hydrolase K06351 kipI; inhibitor of KinA
D AL543_09715 sporulation control protein Spo0M K06377 spo0M; sporulation-control protein
D AL543_18740 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D AL543_18495 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D AL543_10740 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D AL543_18605 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D AL543_17910 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D AL543_15075 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D AL543_13635 SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D AL543_16760 RNA chaperone ProQ K03607 proQ; ProP effector
D AL543_09195 universal stress protein UspA K06149 uspA; universal stress protein A
D AL543_16600 universal stress protein UspE K14055 uspE; universal stress protein E
D AL543_11335 universal stress protein K14061 uspF; universal stress protein F
D AL543_08560 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D AL543_06340 transcriptional regulator K07167 chrR; putative transcriptional regulator
D AL543_13940 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AL543_07415 PhoH family protein K07175 phoH2; PhoH-like ATPase
D AL543_18485 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D AL543_10510 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D AL543_15810 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D AL543_07015 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D AL543_06550 SMP protein K07186 smp; membrane protein
D AL543_16810 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AL543_14845 outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D AL543_20165 lipoprotein localization protein LolB K02494 lolB; outer membrane lipoprotein LolB
D AL543_19560 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AL543_06095 molecular chaperone K06142 hlpA; outer membrane protein
D AL543_11780 murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD
D AL543_12365 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D AL543_06050 outer membrane protein OmpW K07275 ompW; outer membrane protein
D AL543_10950 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D AL543_19200 starvation-inducible protein K07285 slp; outer membrane lipoprotein
D AL543_06325 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D AL543_14315 AsmA family protein K07289 asmA; AsmA protein
D AL543_14015 NfeD family protein K07340 ybbJ; inner membrane protein
D AL543_17295 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D AL543_17590 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D AL543_17085 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AL543_19585 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D AL543_19570 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D AL543_13005 cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D AL543_12870 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein
D AL543_10920 bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin
D AL543_15795 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D AL543_04505 DUF475 domain-containing protein K05794 terC; tellurite resistance protein TerC
D AL543_03095 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D AL543_12880 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D AL543_11405 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D AL543_08915 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D AL543_00425 hutX; heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
D AL543_15675 peptidase K07231 K07231; putative iron-regulated protein
D AL543_06450 short-chain dehydrogenase K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AL543_03955 GlpM family protein K02442 glpM; membrane protein GlpM
D AL543_14140 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D AL543_16585 glucosaminidase K03796 bax; Bax protein
D AL543_00920 gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D AL543_07690 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D AL543_00360 phosphatase K04477 ycdX; putative hydrolase
D AL543_06620 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D AL543_06475 tRNA-binding protein K06878 K06878; tRNA-binding protein
D AL543_12125 serine protease K07001 K07001; NTE family protein
D AL543_17535 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D AL543_12245 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D AL543_17155 iron-sulfur cluster assembly accessory protein K05997 sufA; Fe-S cluster assembly protein SufA
D AL543_17150 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D AL543_17140 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D AL543_08550 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D AL543_08315 membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D AL543_06375 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D AL543_17130 cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D AL543_15645 rhodanese domain-containing protein K07146 K07146; UPF0176 protein
D AL543_14940 lysogenization regulator HflD K07153 hflD; high frequency lysogenization protein
D AL543_10865 SlyX protein K03745 slyX; SlyX protein
D AL543_09765 DUF494 domain-containing protein K03747 smg; Smg protein
D AL543_03075 hypothetical protein K05805 creA; CreA protein
D AL543_11595 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D AL543_14135 SPOR domain-containing protein K03749 dedD; DedD protein
D AL543_07995 cell division protein DamX K03112 damX; DamX protein
D AL543_15240 vancomycin high temperature exclusion protein K03748 sanA; SanA protein
D AL543_16775 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D AL543_02890 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D AL543_01485 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D AL543_03100 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D AL543_08870 hypothetical protein K08985 K08985; putative lipoprotein
D AL543_16280 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D AL543_15885 TIGR01620 family protein K08990 ycjF; putative membrane protein
D AL543_08815 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein
D AL543_18380 hypothetical protein K09858 K09858; SEC-C motif domain protein
D AL543_14440 lipo-like protein K09914 K09914; putative lipoprotein
D AL543_01895 transcriptional regulator K05775 malM; maltose operon periplasmic protein
D AL543_04495 alkylphosphonate utilization protein K06193 phnA; protein PhnA
D AL543_01845 DUF417 domain-containing protein K21741 rclC; reactive chlorine resistance protein C
D AL543_17205 DUF417 domain-containing protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D AL543_17195 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D AL543_05740 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D AL543_00005 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D AL543_18155 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D AL543_15880 nucleoside triphosphate hydrolase K06918 K06918; uncharacterized protein
D AL543_01995 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D AL543_04195 DUF296 domain-containing protein K06934 K06934; uncharacterized protein
D AL543_17610 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D AL543_14405 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D AL543_08710 GTPase K06946 K06946; uncharacterized protein
D AL543_14905 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D AL543_15490 L-cystine transporter K06956 K06956; uncharacterized protein
D AL543_01500 N-acetyltransferase K06975 K06975; uncharacterized protein
D AL543_06245 deacylase K06987 K06987; uncharacterized protein
D AL543_05470 VOC family protein K06996 K06996; uncharacterized protein
D AL543_05520 VOC family protein K06996 K06996; uncharacterized protein
D AL543_05265 VOC family protein K06996 K06996; uncharacterized protein
D AL543_05355 VOC family protein K06996 K06996; uncharacterized protein
D AL543_03875 VOC family protein K06996 K06996; uncharacterized protein
D AL543_06955 esterase YqiA K07000 K07000; uncharacterized protein
D AL543_18595 hypothetical protein K07000 K07000; uncharacterized protein
D AL543_01060 Fis family transcriptional regulator K07003 K07003; uncharacterized protein
D AL543_07965 nuclease K07004 K07004; uncharacterized protein
D AL543_10090 phosphohydrolase K07006 K07006; uncharacterized protein
D AL543_19485 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D AL543_07865 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D AL543_07915 hydrolase K07019 K07019; uncharacterized protein
D AL543_13175 hypothetical protein K07034 K07034; uncharacterized protein
D AL543_14840 prepilin peptidase K07039 K07039; uncharacterized protein
D AL543_18280 YecA family protein K07039 K07039; uncharacterized protein
D AL543_07890 metal-binding protein K07070 K07070; uncharacterized protein
D AL543_14035 TIGR01777 family protein K07071 K07071; uncharacterized protein
D AL543_02260 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D AL543_11345 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D AL543_18405 hypothetical protein K07090 K07090; uncharacterized protein
D AL543_12490 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AL543_06725 hypothetical protein K07090 K07090; uncharacterized protein
D AL543_01445 PhoX family phosphatase K07093 K07093; uncharacterized protein
D AL543_14040 phosphodiesterase K07095 K07095; uncharacterized protein
D AL543_07620 YtfJ family protein K07109 K07109; uncharacterized protein
D AL543_03910 hypothetical protein K07112 K07112; uncharacterized protein
D AL543_03915 transporter K07112 K07112; uncharacterized protein
D AL543_00990 NAD(P)-dependent oxidoreductase K07118 K07118; uncharacterized protein
D AL543_03990 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D AL543_12040 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D AL543_15275 molecular chaperone DnaJ K07126 K07126; uncharacterized protein
D AL543_01900 hypothetical protein K07126 K07126; uncharacterized protein
D AL543_01405 hypothetical protein K07136 K07136; uncharacterized protein
D AL543_13305 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D AL543_06670 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D AL543_00505 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D AL543_06350 ATP-dependent protease K07157 K07157; uncharacterized protein
D AL543_09545 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AL543_11705 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D AL543_11530 YggU family protein K09131 K09131; uncharacterized protein
D AL543_13870 hypothetical protein K09158 K09158; uncharacterized protein
D AL543_14410 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D AL543_18480 YfbU family protein K09161 K09161; uncharacterized protein
D AL543_14910 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D AL543_04155 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D AL543_01165 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D AL543_13530 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D AL543_17815 hypothetical protein K09780 K09780; uncharacterized protein
D AL543_00545 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D AL543_18490 hypothetical protein K09786 K09786; uncharacterized protein
D AL543_14380 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D AL543_18530 hypothetical protein K09791 K09791; uncharacterized protein
D AL543_16610 cytochrome biogenesis protein K09792 K09792; uncharacterized protein
D AL543_02370 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D AL543_13395 RnfH family protein K09801 K09801; uncharacterized protein
D AL543_03365 hypothetical protein K09802 K09802; uncharacterized protein
D AL543_04780 toxin K09803 K09803; uncharacterized protein
D AL543_11660 oxidative stress defense protein K09807 K09807; uncharacterized protein
D AL543_15940 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D AL543_15965 (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D AL543_06270 (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D AL543_16790 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D AL543_18615 hypothetical protein K09859 K09859; uncharacterized protein
D AL543_06590 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D AL543_06940 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D AL543_10380 DUF416 domain-containing protein K09891 K09891; uncharacterized protein
D AL543_08960 Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein
D AL543_07195 UPF0149 family protein K09895 K09895; uncharacterized protein
D AL543_09705 DUF1040 domain-containing protein K09896 K09896; uncharacterized protein
D AL543_01920 hypothetical protein K09897 K09897; uncharacterized protein
D AL543_07920 hypothetical protein K09898 K09898; uncharacterized protein
D AL543_14805 DUF412 domain-containing protein K09899 K09899; uncharacterized protein
D AL543_15345 hypothetical protein K09901 K09901; uncharacterized protein
D AL543_19065 hypothetical protein K09902 K09902; uncharacterized protein
D AL543_19480 hypothetical protein K09904 K09904; uncharacterized protein
D AL543_19680 VOC family protein K09907 K09907; uncharacterized protein
D AL543_11975 hypothetical protein K09908 K09908; uncharacterized protein
D AL543_01425 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D AL543_12135 hypothetical protein K09910 K09910; uncharacterized protein
D AL543_16685 macrodomain Ter protein MatP K09911 K09911; uncharacterized protein
D AL543_03375 DUF480 domain-containing protein K09915 K09915; uncharacterized protein
D AL543_19245 DUF1315 domain-containing protein K09916 K09916; uncharacterized protein
D AL543_04395 YoaH family protein K09917 K09917; uncharacterized protein
D AL543_06435 hydroxyacid dehydrogenase K09918 K09918; uncharacterized protein
D AL543_06965 dehydrogenase K09920 K09920; uncharacterized protein
D AL543_08895 DUF484 domain-containing protein K09921 K09921; uncharacterized protein
D AL543_17175 hypothetical protein K09922 K09922; uncharacterized protein
D AL543_16625 hypothetical protein K09926 K09926; uncharacterized protein
D AL543_18550 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D AL543_20495 DUF2063 domain-containing protein K09929 K09929; uncharacterized protein
D AL543_20500 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D AL543_10860 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D AL543_20115 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D AL543_10435 peptidase K09939 K09939; uncharacterized protein
D AL543_17355 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D AL543_15690 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D AL543_19090 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D AL543_07645 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D AL543_02330 hypothetical protein K09954 K09954; uncharacterized protein
D AL543_02860 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D AL543_13290 ACT domain-containing protein K09964 K09964; uncharacterized protein
D AL543_20425 TraB/GumN family protein K09973 K09973; uncharacterized protein
D AL543_19780 DUF1853 domain-containing protein K09977 K09977; uncharacterized protein
D AL543_07005 TIGR00153 family protein K07220 K07220; uncharacterized protein
D AL543_15685 iron-regulated protein A K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 26, 2024