+E Replication protein KO
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DNA Replication Proteins - Vibrio nigripulchritudo
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D VIBNI_A2478 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D VIBNI_B1060 haeIIM; Modification methylase HaeII (Cytosine-specific methyltransferase HaeII) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VIBNI_A2976 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D VIBNI_A3315 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VIBNI_A2425 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VIBNI_A1410 ihfA; Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D VIBNI_A2333 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D VIBNI_A0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D VIBNI_A3547 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VIBNI_A2869 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VIBNI_A3028 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E VIBNI_A2489 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E VIBNI_A0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E VIBNI_A2967 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E VIBNI_A2710 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E VIBNI_A2355 putative DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E VIBNI_A2477 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E VIBNI_A2012 putative DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E VIBNI_A3297 putative Ribonuclease H-like K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E VIBNI_A0815 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
E VIBNI_A0447 putative DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RNase H
E VIBNI_A2478 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E VIBNI_A2490 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E VIBNI_A3404 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E VIBNI_A2621 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E VIBNI_A2478 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E VIBNI_A2490 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
D VIBNI_A3577 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D VIBNI_A2573 seqA; Protein seqA K03645 seqA; negative modulator of initiation of replication
B DNA Topoisomerases
C VIBNI_A2050 gyrA; DNA gyrase (type II topoisomerase), subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C VIBNI_A0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C VIBNI_A0202 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C VIBNI_A0201 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C VIBNI_A2121 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C VIBNI_A0849 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022