+D GENES KO
#
KEGG Orthology (KO) - Vibrio parahaemolyticus BB22OP
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vpb00010]
D VPBB_2589 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_0257 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPBB_2419 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPBB_0251 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPBB_A1130 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPBB_2420 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPBB_2679 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPBB_1875 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_A0770 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_0364 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_A0343 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPBB_2341 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPBB_2340 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_A0136 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPBB_1562 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_2226 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_1978 Aldose 1-epimerase family protein YeaD K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VPBB_0119 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPBB_2454 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_A1556 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_A0169 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_1880 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_A1530 PTS system glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vpb00020]
D VPBB_0799 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VPBB_2321 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPBB_0962 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPBB_0804 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VPBB_0805 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_0807 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPBB_0806 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPBB_0802 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_0803 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_0800 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPBB_0801 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_1725 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPBB_2722 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_0119 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPBB_2341 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPBB_2340 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vpb00030]
D VPBB_2589 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPBB_1570 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPBB_1569 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VPBB_1568 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VPBB_2599 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPBB_2425 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPBB_A1082 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPBB_A1081 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VPBB_2412 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VPBB_2262 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VPBB_A0987 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VPBB_2260 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_0708 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VPBB_0057 Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VPBB_0060 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPBB_A0076 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPBB_0058 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D VPBB_A0075 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VPBB_2419 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_0257 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vpb00040]
D VPBB_A0079 Exopolygalacturonate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D VPBB_A0081 Oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D VPBB_A0072 hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D VPBB_A0070 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D VPBB_0248 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPBB_2531 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0249 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_A1537 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VPBB_2599 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPBB_A1538 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D VPBB_A1536 Ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D VPBB_1253 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VPBB_1244 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:vpb00051]
D VPBB_A1297 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0243 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_A0879 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0242 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_A0484 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_0241 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VPBB_0238 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VPBB_0239 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_0257 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPBB_0376 Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VPBB_A0456 Putative oxidoreductase linked to yggC K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D VPBB_A0759 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VPBB_2419 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPBB_0251 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPBB_A0278 PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPBB_A0758 PTS system fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPBB_A0454 PTS system mannitol-specific cryptic IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPBB_A0455 PTS system mannitol-specific cryptic IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPBB_0377 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vpb00052]
D VPBB_2226 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VPBB_2227 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPBB_2228 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPBB_A0825 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_2229 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_2531 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0249 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_2231 Evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VPBB_2232 Evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D VPBB_1089 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_1913 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:vpb00053]
D VPBB_0248 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPBB_1859 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPBB_A0213 PTS system IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPBB_A0212 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPBB_A0211 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPBB_A1537 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VPBB_1253 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:vpb00500]
D VPBB_1913 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VPBB_2531 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0249 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_2455 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPBB_2457 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPBB_2456 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPBB_2454 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_A1556 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_A0169 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPBB_0974 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPBB_A0779 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPBB_0975 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPBB_A1482 1 4-alpha-glucan (glycogen) branching enzyme GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VPBB_A1484 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VPBB_A1502 Xanthosine operon regulatory protein XapR LysR family K01200 pulA; pullulanase [EC:3.2.1.41]
D VPBB_A0417 Glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPBB_0018 Periplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPBB_A1480 Periplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPBB_A0909 Cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPBB_A1483 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_A1508 Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D VPBB_0681 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPBB_0682 Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_2589 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vpb00520]
D VPBB_2153 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VPBB_A0048 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VPBB_0723 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2312 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2313 Chitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_0788 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPBB_1402 Latent glucokinase ycfX K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VPBB_0787 N-acetylglucosamine-6-phosphate deacetylase, NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VPBB_A0031 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VPBB_2311 Glucosamine kinase GpsK K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D VPBB_0366 Glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPBB_2286 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VPBB_2916 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VPBB_A1592 PTS system N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPBB_A1591 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VPBB_0517 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VPBB_0518 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VPBB_2478 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPBB_2770 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPBB_0230 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VPBB_0231 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VPBB_0207 Bifunctional acetyl transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D VPBB_1880 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_A1530 PTS system glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_2531 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0249 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0248 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPBB_2227 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPBB_2228 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPBB_A0825 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_2229 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_1859 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPBB_2589 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPBB_A1297 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0243 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_A0879 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0242 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_A0484 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_0241 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VPBB_0238 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VPBB_0239 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D VPBB_0974 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPBB_A0779 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vpb00620]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_2341 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPBB_2340 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_0946 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1918 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_A0558 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_1919 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPBB_1875 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_A0770 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_0364 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_2729 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPBB_2730 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPBB_A0735 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_2008 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_1486 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VPBB_1562 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VPBB_A1369 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VPBB_A0136 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPBB_A0133 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VPBB_A0915 D-Lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D VPBB_A0282 putative glyoxylase family protein (Lactoylglutathione lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPBB_1985 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPBB_1755 putative metal-binding enzyme, YcbL-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VPBB_1182 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VPBB_2624 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VPBB_2366 Oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VPBB_2365 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_1725 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPBB_2722 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_2618 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPBB_0119 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPBB_A0343 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPBB_0556 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_0354 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vpb00630]
D VPBB_0557 Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_0556 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_0799 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VPBB_2321 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1105 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VPBB_A0285 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPBB_A1291 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPBB_2497 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPBB_2656 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VPBB_2534 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_0686 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0750 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0748 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPBB_A0752 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_A0749 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VPBB_A0108 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPBB_0060 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPBB_A0076 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPBB_1418 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPBB_A0440 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPBB_1419 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VPBB_1420 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VPBB_0818 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vpb00640]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_1504 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPBB_1918 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_A0558 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_1919 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPBB_A0595 Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPBB_A0594 Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPBB_A0593 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_0946 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPBB_0027 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_2729 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPBB_2730 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPBB_A0735 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_2008 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_0806 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPBB_0807 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPBB_A1025 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_A0567 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_1507 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D VPBB_1506 2-methylcitrate dehydratase FeS dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D VPBB_1505 PrpF protein involved in 2-methylcitrate cycle K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D VPBB_2321 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPBB_1508 Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D VPBB_A0136 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPBB_A0620 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VPBB_A0776 putative oxidoreductase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D VPBB_0370 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:vpb00650]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_1155 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_A0817 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPBB_A1102 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D VPBB_A1105 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VPBB_2365 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPBB_0802 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_0803 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_0800 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPBB_0801 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_2450 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_1630 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_0946 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPBB_A1058 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_A0525 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_2907 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0360 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0361 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPBB_2908 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPBB_A0353 2-deoxy-D-gluconate 3-dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vpb00660]
D VPBB_2907 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0360 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0361 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPBB_2908 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPBB_0806 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPBB_0807 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPBB_0352 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VPBB_0351 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VPBB_0353 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vpb00562]
D VPBB_0565 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VPBB_A1025 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_A0567 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_0251 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vpb00190]
D VPBB_0925 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VPBB_0802 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_0803 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_0800 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPBB_0801 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_0422 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VPBB_0423 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPBB_0424 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPBB_A0493 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0577 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0576 Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D VPBB_A0488 Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D VPBB_A0486 Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D VPBB_A0485 Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D VPBB_A0487 Cytochrome oxidase biogenesis protein Cox11-CtaG copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPBB_A0492 Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPBB_1449 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VPBB_1448 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VPBB_1447 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VPBB_1446 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VPBB_A0575 Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D VPBB_A0574 Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D VPBB_A0573 Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D VPBB_A1038 putative Cytochrome bd2 subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPBB_1000 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPBB_A1039 putative Cytochrome bd2 subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPBB_1001 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPBB_A1044 hypothetical protein K08738 CYC; cytochrome c
D VPBB_2920 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VPBB_2918 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VPBB_2919 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VPBB_2921 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VPBB_2917 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VPBB_2924 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPBB_2922 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VPBB_2923 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VPBB_0322 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VPBB_1628 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VPBB_1091 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VPBB_0547 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPBB_0552 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:vpb00710]
D VPBB_2420 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPBB_A1130 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPBB_2419 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_0257 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPBB_2425 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPBB_A1082 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPBB_2412 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VPBB_2646 Phosphoribulokinase-like protein K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D VPBB_0251 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPBB_2599 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPBB_A1081 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VPBB_2618 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPBB_0119 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPBB_2624 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:vpb00720]
D VPBB_A0343 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPBB_2618 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_1725 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPBB_2722 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPBB_0802 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_0803 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_0800 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPBB_0801 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_0807 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPBB_0806 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_0962 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPBB_2321 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPBB_2729 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPBB_2730 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPBB_A0735 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_2008 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_A0780 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VPBB_0833 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VPBB_2620 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VPBB_1919 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPBB_1918 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_A0558 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:vpb00680]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_A0063 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D VPBB_1418 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPBB_A0440 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPBB_1419 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VPBB_1420 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VPBB_0686 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0750 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_2534 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPBB_2497 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPBB_2618 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_2419 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_0257 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_1088 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPBB_1087 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPBB_0981 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPBB_A0118 Cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPBB_A0119 Biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPBB_A0706 Glutamate synthase [NADPH] large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D VPBB_1918 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_A0558 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_1919 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_A0343 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPBB_2679 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPBB_2413 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1687 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1170 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPBB_2257 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vpb00910]
D VPBB_A0964 Nitrate ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPBB_A0963 Nitrate ABC transporter permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPBB_A0962 Nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPBB_A1099 Periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D VPBB_A1100 Nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D VPBB_A0969 Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D VPBB_A0899 Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPBB_A0961 Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPBB_A0898 Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VPBB_A0960 Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VPBB_1770 Cytochrome c552 precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D VPBB_1116 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D VPBB_A0276 Enoyl-[acyl-carrier-protein] reductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D VPBB_1463 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_0461 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0463 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0460 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_0462 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_1125 Formate dehydrogenase-O, major subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_2336 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VPBB_A0203 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
D VPBB_A1372 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vpb00920]
D VPBB_0306 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPBB_0305 CysD Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPBB_0308 CysC Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPBB_0134 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VPBB_2539 Phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VPBB_2541 Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VPBB_2540 Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VPBB_1145 Cytochrome c553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D VPBB_1850 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPBB_1848 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPBB_1849 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPBB_1126 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_A1075 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_2790 Thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VPBB_2684 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPBB_0760 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPBB_0903 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPBB_1609 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VPBB_2622 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPBB_1358 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VPBB_1359 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VPBB_1360 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vpb00061]
D VPBB_2729 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPBB_2730 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPBB_A0735 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_2008 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPBB_0853 Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D VPBB_0854 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
D VPBB_1887 Acyl carrier protein K02078 acpP; acyl carrier protein
D VPBB_1889 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPBB_1890 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPBB_A0883 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPBB_0843 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_2013 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_0840 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_1886 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_A1020 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A1186 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_0841 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1888 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A0572 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1456 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VPBB_2123 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPBB_1155 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_A0817 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_0824 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1052 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1804 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_0359 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vpb00071]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_2105 Butyryl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VPBB_1154 Butyryl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VPBB_0824 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1052 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1804 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_0359 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vpb00561]
D VPBB_A0108 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPBB_0371 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D VPBB_0370 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VPBB_2214 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VPBB_2785 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPBB_1891 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VPBB_0393 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPBB_2477 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VPBB_0202 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPBB_A1159 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPBB_1107 Lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VPBB_A1473 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VPBB_1089 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vpb00564]
D VPBB_2683 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VPBB_2216 Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VPBB_2785 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPBB_0393 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPBB_2477 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VPBB_0202 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPBB_A1159 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPBB_A0729 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPBB_2811 Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VPBB_2210 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VPBB_A0135 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VPBB_2772 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VPBB_2675 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VPBB_1785 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VPBB_0655 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VPBB_A0120 Phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VPBB_1110 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D VPBB_A0316 Cardiolipin synthetase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:vpb00565]
D VPBB_A0729 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:vpb00600]
D VPBB_1089 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VPBB_0723 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2312 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D VPBB_A0729 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D VPBB_A0729 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:vpb00592]
D VPBB_A0729 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vpb01040]
D VPBB_A0651 Fatty acid desaturase Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VPBB_A0819 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VPBB_0906 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VPBB_1810 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vpb00230]
D VPBB_0409 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_A0919 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_A0200 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_0135 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VPBB_2260 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_0708 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VPBB_2004 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VPBB_2747 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VPBB_2102 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VPBB_1221 Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VPBB_0636 Phosphoribosylformylglycinamidine synthase, synthetase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VPBB_2101 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VPBB_2869 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VPBB_1187 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VPBB_1055 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VPBB_2746 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPBB_1999 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VPBB_A0799 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPBB_0717 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_1131 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_2380 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPBB_1059 Inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VPBB_A0781 Inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VPBB_0061 Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_A1347 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_2259 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_A0050 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VPBB_0533 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VPBB_2337 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VPBB_0587 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VPBB_0576 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPBB_0527 Inosine K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VPBB_2441 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VPBB_0643 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VPBB_0588 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VPBB_A1059 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VPBB_0152 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VPBB_1775 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPBB_1776 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VPBB_A0862 Ribonucleotide reductase of class III (anaerobic) large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VPBB_0883 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR K01129 dgt; dGTPase [EC:3.1.5.1]
D VPBB_0884 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VPBB_0150 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VPBB_2836 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VPBB_0546 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VPBB_2388 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VPBB_2824 Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VPBB_1618 Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D VPBB_A0346 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPBB_2662 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPBB_0106 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VPBB_0669 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VPBB_A1173 Adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D VPBB_0303 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VPBB_0780 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPBB_2387 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPBB_0411 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VPBB_0343 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VPBB_0308 CysC Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPBB_0306 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPBB_0305 CysD Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:vpb00240]
D VPBB_0451 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPBB_0450 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPBB_2474 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VPBB_2475 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VPBB_A0378 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VPBB_1462 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VPBB_0186 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VPBB_1862 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VPBB_2132 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VPBB_0576 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPBB_2387 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPBB_2507 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VPBB_2386 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VPBB_1867 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VPBB_1901 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D VPBB_A0799 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPBB_0717 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_1131 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_2380 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPBB_A0199 5'-nucleotidase YjjG K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VPBB_0916 Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VPBB_A0983 N-Ribosylnicotinamide phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VPBB_A0050 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VPBB_2100 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VPBB_0303 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VPBB_0669 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VPBB_1222 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VPBB_A1142 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPBB_A0862 Ribonucleotide reductase of class III (anaerobic) large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VPBB_1775 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPBB_1776 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VPBB_0884 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VPBB_A1091 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VPBB_1883 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VPBB_2261 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VPBB_1077 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VPBB_0500 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vpb00250]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_2402 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VPBB_A0345 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPBB_1973 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPBB_2637 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPBB_0784 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VPBB_0885 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPBB_2534 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPBB_1032 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VPBB_2713 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VPBB_2614 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPBB_2613 Argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VPBB_A0346 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPBB_2662 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPBB_1055 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VPBB_2474 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VPBB_2475 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_2450 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_1630 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_0461 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0463 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0460 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_0462 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_1125 Formate dehydrogenase-O, major subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPBB_1463 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPBB_A1577 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_0451 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPBB_0450 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPBB_2443 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPBB_0366 Glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPBB_2004 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vpb00260]
D VPBB_1578 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2536 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2371 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_0472 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPBB_2621 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPBB_1959 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2011 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_0473 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VPBB_1703 Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D VPBB_0474 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VPBB_A0920 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VPBB_0686 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0750 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_2534 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPBB_2497 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPBB_A0108 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPBB_2679 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPBB_2413 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1687 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1170 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPBB_2257 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VPBB_A1378 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VPBB_A1377 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VPBB_A0748 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPBB_A0752 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_A0749 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VPBB_2772 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VPBB_A1016 Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D VPBB_A1017 Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D VPBB_1731 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPBB_A0234 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPBB_2911 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VPBB_1171 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VPBB_2698 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPBB_1802 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VPBB_1801 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPBB_A0534 Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPBB_1580 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPBB_1784 Diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPBB_1581 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D VPBB_1579 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vpb00270]
D VPBB_2684 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPBB_0760 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPBB_0903 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPBB_1108 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VPBB_2537 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPBB_1813 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPBB_1828 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPBB_2426 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VPBB_1806 N-(3-hydroxybutanoyl)-L-homoserine lactone synthase LuxM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VPBB_0458 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VPBB_A0993 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VPBB_0533 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPBB_1468 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VPBB_0181 DNA-cytosine methyltransferase() K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPBB_2359 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPBB_1823 pyridoxal phosphate-dependent deaminase, putative K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D VPBB_1578 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2536 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2371 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_0472 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPBB_2621 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPBB_1959 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2011 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_1609 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VPBB_2622 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPBB_0600 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D VPBB_2909 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPBB_2361 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VPBB_2431 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1126 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_A1075 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_A0136 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPBB_2698 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPBB_0334 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPBB_1731 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPBB_A0234 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPBB_2413 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1687 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1170 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vpb00280]
D VPBB_2909 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPBB_A0595 Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPBB_A0594 Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPBB_A0593 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_A1028 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VPBB_A0564 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_A1292 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPBB_A1021 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPBB_A0571 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPBB_A1025 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_A0567 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_A1031 Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D VPBB_A1029 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPBB_A0563 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPBB_A1030 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPBB_A0562 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPBB_A1058 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_A0525 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vpb00290]
D VPBB_2911 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VPBB_0352 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VPBB_0351 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VPBB_0353 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VPBB_2907 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0360 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0361 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPBB_2908 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPBB_0035 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VPBB_2910 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VPBB_2909 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPBB_0017 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VPBB_0885 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPBB_0354 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vpb00300]
D VPBB_1578 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2536 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2371 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_0472 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPBB_2621 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPBB_1959 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2011 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2089 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VPBB_0449 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VPBB_2209 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VPBB_2651 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPBB_2085 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VPBB_2820 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VPBB_A1526 Vibrioferrin decarboxylase protein PvsE K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPBB_2821 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPBB_A0370 Aspartate aminotransferase (AspB-4) K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D VPBB_0435 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPBB_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vpb00310]
D VPBB_0805 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_2698 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPBB_2740 lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_2450 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_1630 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_A0176 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VPBB_1194 lactate dehydrogenase-like Fe-S protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VPBB_0602 putative exported protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
C 00220 Arginine biosynthesis [PATH:vpb00220]
D VPBB_2473 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VPBB_2614 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPBB_2613 Argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VPBB_2472 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D VPBB_2443 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_0451 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPBB_0450 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPBB_1463 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_0885 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPBB_2200 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VPBB_2615 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VPBB_2616 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VPBB_2651 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPBB_2617 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vpb00330]
D VPBB_A1142 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPBB_A0159 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VPBB_A0158 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VPBB_1631 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D VPBB_1632 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D VPBB_A1499 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VPBB_1783 putative carboxynorspermidine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D VPBB_1782 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D VPBB_A0430 Spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VPBB_2650 Arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VPBB_2649 Succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VPBB_1234 Succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VPBB_1637 Gamma-glutamyl-putrescine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D VPBB_1633 Gamma-glutamyl-putrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D VPBB_1634 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D VPBB_2437 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VPBB_A1577 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPBB_0646 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1257 Ornithine cyclodeaminase K19742 lhpI; 1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.49]
C 00340 Histidine metabolism [PATH:vpb00340]
D VPBB_1064 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VPBB_1071 Phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VPBB_1069 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VPBB_1068 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VPBB_1070 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VPBB_1067 Histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_1065 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VPBB_0848 Putative histidine ammonia-lyase protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VPBB_1197 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VPBB_1198 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VPBB_1200 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VPBB_1199 Formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:vpb00350]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPBB_1271 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPBB_1272 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VPBB_1274 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VPBB_1273 Fumarylacetoacetase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPBB_0253 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VPBB_2450 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_1630 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vpb00360]
D VPBB_A0526 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPBB_A1358 Histone acetyltransferase HPA2 K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D VPBB_1271 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPBB_0594 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VPBB_A0708 Catalase-Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPBB_A0408 Catalase-Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vpb00380]
D VPBB_0805 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0178 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D VPBB_A0285 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPBB_A1291 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPBB_A0708 Catalase-Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPBB_A0408 Catalase-Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vpb00400]
D VPBB_1476 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_A1085 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_0520 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_2602 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VPBB_2728 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VPBB_2865 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VPBB_2603 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VPBB_0971 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VPBB_2020 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VPBB_1797 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPBB_1798 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VPBB_1799 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VPBB_1800 Indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VPBB_1802 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VPBB_1801 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPBB_A0534 Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPBB_0521 Chorismate mutase I K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VPBB_0528 Chorismate mutase I K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VPBB_2914 Cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPBB_A0526 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vpb00410]
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_2331 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_A1025 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPBB_A0567 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:vpb00430]
D VPBB_2843 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPBB_1032 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VPBB_1463 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPBB_1919 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPBB_1918 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPBB_A0558 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vpb00440]
D VPBB_A0215 Phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VPBB_A0217 pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:vpb00450]
D VPBB_2622 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPBB_1108 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VPBB_2537 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPBB_1813 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPBB_1828 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPBB_0306 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPBB_0305 CysD Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPBB_1903 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vpb00460]
D VPBB_2843 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPBB_A0345 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPBB_1973 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPBB_2637 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPBB_0686 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0750 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vpb00470]
D VPBB_2592 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_A0911 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_A0831 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPBB_2698 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPBB_2443 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPBB_2775 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VPBB_0438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPBB_A0307 EBNA-1 nuclear protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D VPBB_A0306 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D VPBB_1171 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VPBB_2820 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VPBB_A1526 Vibrioferrin decarboxylase protein PvsE K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPBB_2821 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPBB_1254 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D VPBB_1255 D-amino acid dehydrogenase family protein in hydroxy-L-proline catabolic cluster K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D VPBB_1258 1-pyrroline-4-hydroxy-2-carboxylate deaminase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D VPBB_1253 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VPBB_0594 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vpb00480]
D VPBB_2843 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPBB_A0823 Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VPBB_2361 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VPBB_2431 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VPBB_2464 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VPBB_0575 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VPBB_1464 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VPBB_0641 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VPBB_A0591 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPBB_A1290 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPBB_0063 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VPBB_0962 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPBB_1568 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VPBB_1570 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPBB_A1149 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VPBB_2611 Peroxiredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D VPBB_A1174 Putative antioxidant K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D VPBB_A1499 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vpb00511]
D VPBB_2231 Evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VPBB_2232 Evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D VPBB_0723 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2312 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_A0329 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:vpb00540]
D VPBB_2122 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VPBB_0445 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VPBB_2124 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VPBB_1074 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VPBB_2121 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VPBB_0936 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VPBB_2485 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPBB_0716 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPBB_0938 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPBB_0217 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VPBB_2332 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_1604 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_0187 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_0221 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VPBB_0945 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VPBB_A1160 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPBB_0203 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VPBB_2104 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VPBB_0407 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VPBB_0679 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VPBB_0222 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VPBB_0219 ADP-heptose--lipooligosaccharide heptosyltransferase, putative K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vpb00541]
D VPBB_2531 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_0249 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPBB_A0825 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_2229 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPBB_0248 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPBB_1859 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPBB_0205 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPBB_0204 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VPBB_A1297 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0243 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_A0879 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPBB_0242 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_A0484 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPBB_0241 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VPBB_0238 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VPBB_0239 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D VPBB_2916 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VPBB_0230 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VPBB_0231 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VPBB_0247 Nucleoside-diphosphate sugar epimerase dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D VPBB_0207 Bifunctional acetyl transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:vpb00550]
D VPBB_2478 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPBB_2770 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPBB_0441 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VPBB_0438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPBB_0435 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPBB_A0831 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPBB_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VPBB_2130 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VPBB_0396 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0356 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0437 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPBB_0440 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VPBB_A1481 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPBB_2609 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPBB_2323 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPBB_0693 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPBB_0434 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPBB_0690 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1176 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1457 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_2293 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vpb00552]
D VPBB_0396 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0356 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0247 Nucleoside-diphosphate sugar epimerase dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D VPBB_1246 Lipopolysaccharide cholinephosphotransferase LicD1 K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vpb00543]
D VPBB_A1276 Capsular polysaccharide synthesis enzyme CpsA sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VPBB_2684 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vpb00730]
D VPBB_2858 Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VPBB_A0127 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VPBB_2856 Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VPBB_0568 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPBB_0662 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPBB_2853 Thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VPBB_0656 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VPBB_2854 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VPBB_A0122 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VPBB_2857 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VPBB_A0121 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VPBB_0654 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VPBB_2674 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPBB_A1493 putative GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPBB_1983 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_A0977 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_0923 Thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D VPBB_0780 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPBB_A0123 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:vpb00740]
D VPBB_1762 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_A0005 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_0651 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VPBB_0649 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VPBB_2817 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VPBB_A1148 3 4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VPBB_0652 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VPBB_0650 Riboflavin synthase eubacterial K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VPBB_1388 Lumazine protein, riboflavin synthase-like protein K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VPBB_0507 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VPBB_2829 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VPBB_A1464 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D VPBB_A0122 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VPBB_0409 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_A0919 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_A0200 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPBB_0325 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vpb00750]
D VPBB_A1496 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VPBB_1284 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VPBB_2422 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VPBB_2012 Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VPBB_1170 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPBB_0346 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VPBB_2392 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VPBB_0474 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vpb00760]
D VPBB_2402 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VPBB_1010 Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VPBB_2344 Quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VPBB_A0290 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VPBB_0061 Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_A1347 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_2259 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPBB_A0799 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPBB_0717 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_1131 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPBB_2380 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPBB_A0382 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VPBB_2387 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPBB_2757 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VPBB_A0381 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VPBB_2375 C-terminal domain of CinA type S K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VPBB_A0287 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VPBB_1430 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VPBB_0621 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VPBB_2781 Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VPBB_A0843 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VPBB_A0842 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VPBB_2450 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPBB_1630 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vpb00770]
D VPBB_2907 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0360 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPBB_0361 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPBB_2908 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPBB_0035 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VPBB_2910 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VPBB_2330 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VPBB_2192 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VPBB_2331 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VPBB_2768 Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D VPBB_0189 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VPBB_2387 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPBB_0197 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VPBB_2349 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VPBB_2391 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VPBB_A0788 Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VPBB_2909 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPBB_1160 Glutamate decarboxylase, eukaryotic type K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:vpb00780]
D VPBB_1043 Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VPBB_0843 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_2013 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_0840 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_1886 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_A1020 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A1186 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_0841 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1888 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A0572 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_2123 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPBB_0138 Biotin synthesis protein bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VPBB_1042 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VPBB_1040 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VPBB_1044 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VPBB_1041 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VPBB_2769 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vpb00785]
D VPBB_0688 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VPBB_0687 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_2341 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPBB_2340 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPBB_0804 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VPBB_0805 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPBB_A0595 Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPBB_A0594 Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPBB_A0593 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPBB_A0748 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPBB_A0752 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPBB_A0749 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vpb00790]
D VPBB_A1069 GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VPBB_1983 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_A0977 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_1186 Phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPBB_A0698 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D VPBB_0394 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VPBB_2329 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VPBB_0395 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VPBB_2287 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VPBB_0342 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VPBB_2007 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VPBB_1762 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_A0005 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_0651 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VPBB_2652 Para-aminobenzoate synthase, amidotransferase component K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VPBB_1726 Para-aminobenzoate synthase, aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VPBB_1885 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VPBB_1734 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VPBB_A0527 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPBB_A0526 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VPBB_1499 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VPBB_1498 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VPBB_0672 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VPBB_1933 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VPBB_1930 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VPBB_1928 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VPBB_1932 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VPBB_A1070 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VPBB_1404 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VPBB_1405 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vpb00670]
D VPBB_0342 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VPBB_A0780 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VPBB_0833 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VPBB_0686 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_A0750 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPBB_2102 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VPBB_2746 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPBB_2876 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VPBB_A0752 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPBB_2537 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPBB_0500 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VPBB_0818 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VPBB_2620 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VPBB_2411 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vpb00860]
D VPBB_0730 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPBB_0711 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VPBB_2300 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VPBB_0097 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VPBB_2825 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VPBB_2826 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VPBB_2754 Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VPBB_2866 Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VPBB_0105 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VPBB_0032 Protoporphyrinogen IX oxidase, oxygen-independent, HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VPBB_2827 Uroporphyrinogen-III methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPBB_A0896 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPBB_0304 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPBB_A0968 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPBB_1478 Siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D VPBB_A0493 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0577 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0492 Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPBB_1899 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VPBB_A0853 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VPBB_0457 Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VPBB_1231 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VPBB_1230 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VPBB_1229 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VPBB_1232 Alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VPBB_A0398 Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D VPBB_2625 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vpb00130]
D VPBB_2787 Chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VPBB_2786 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VPBB_2831 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VPBB_0325 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VPBB_2407 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VPBB_2408 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VPBB_0090 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VPBB_0705 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VPBB_0886 Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VPBB_0887 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VPBB_0888 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VPBB_0890 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VPBB_0891 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VPBB_0889 Naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VPBB_A0806 Uncharacterized protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VPBB_0262 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VPBB_2096 Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VPBB_A1587 Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VPBB_1271 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vpb00900]
D VPBB_0656 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VPBB_2128 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VPBB_2383 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VPBB_0709 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VPBB_2382 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VPBB_0579 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VPBB_0511 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0880 Hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D VPBB_0325 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VPBB_A0258 Isopentenyl-diphosphate delta-isomerase FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D VPBB_0657 Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VPBB_0336 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VPBB_2130 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:vpb00907]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VPBB_2425 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPBB_A1082 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:vpb00523]
D VPBB_0205 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPBB_0204 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D VPBB_0886 Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D VPBB_0204 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
D VPBB_0646 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00261 Monobactam biosynthesis [PATH:vpb00261]
D VPBB_0306 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPBB_0305 CysD Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPBB_1578 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2536 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_2371 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPBB_0472 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPBB_2621 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPBB_1959 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2011 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPBB_2089 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VPBB_0449 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vpb00521]
D VPBB_0796 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPBB_0565 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VPBB_0205 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPBB_0204 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:vpb00525]
D VPBB_0205 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPBB_0204 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:vpb00401]
D VPBB_0521 Chorismate mutase I K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VPBB_1797 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPBB_1798 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VPBB_1889 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPBB_A1020 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A1186 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_0841 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1888 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A0572 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VPBB_0853 Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D VPBB_0854 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
D VPBB_1887 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vpb00999]
D VPBB_2426 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VPBB_2865 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vpb00362]
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_A0589 Protocatechuate 3 4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D VPBB_A1042 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VPBB_A1561 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VPBB_0573 Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2365 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vpb00627]
D VPBB_1486 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VPBB_0325 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:vpb00364]
D VPBB_A0966 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:vpb00625]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:vpb00361]
D VPBB_A0966 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:vpb00623]
D VPBB_A0966 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vpb00633]
D VPBB_A1454 Oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VPBB_A0356 2 4-dienoyl-CoA reductase [NADPH] K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D VPBB_A0713 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VPBB_2027 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPBB_0028 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vpb00643]
D VPBB_1272 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VPBB_1274 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VPBB_1273 Fumarylacetoacetase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vpb00930]
D VPBB_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPBB_2026 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vpb00626]
D VPBB_A0513 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPBB_A0064 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPBB_1956 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D VPBB_A0589 Protocatechuate 3 4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vpb03020]
D VPBB_2760 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPBB_2759 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPBB_0295 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPBB_0151 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vpb03010]
D VPBB_1866 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VPBB_2134 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VPBB_0276 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VPBB_0294 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VPBB_0287 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VPBB_2598 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VPBB_2628 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VPBB_0284 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VPBB_0421 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VPBB_0269 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VPBB_0293 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VPBB_2629 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VPBB_0292 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VPBB_0283 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D VPBB_2279 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VPBB_2355 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VPBB_0279 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VPBB_2596 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D VPBB_0274 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VPBB_0505 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VPBB_0390 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VPBB_2763 LSU ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1
D VPBB_0273 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VPBB_0270 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VPBB_0271 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VPBB_0282 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VPBB_0285 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VPBB_2761 LSU ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VPBB_2595 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VPBB_2762 LSU ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10
D VPBB_2764 LSU ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11
D VPBB_0420 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VPBB_0280 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VPBB_0289 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VPBB_0277 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VPBB_0296 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VPBB_0286 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VPBB_2352 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VPBB_1207 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VPBB_0337 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VPBB_0275 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VPBB_0272 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VPBB_0281 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VPBB_1134 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VPBB_0338 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VPBB_0192 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VPBB_0278 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VPBB_0288 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VPBB_0268 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VPBB_2146 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VPBB_1892 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VPBB_0193 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D VPBB_0005 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VPBB_1206 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VPBB_0291 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VPBB_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r31 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r25 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r28 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_Ar01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r30 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r24 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r27 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_Ar02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_Ar03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r26 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r29 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r23 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vpb00970]
D VPBB_t10 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_At03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t98 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t107 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t76 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t56 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t60 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t54 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t58 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t55 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t52 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t57 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t47 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t68 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t65 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t71 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t73 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t105 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t74 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t109 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t80 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t96 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_At08 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_At10 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_At13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_t46 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_t26 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t30 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t18 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t22 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_At01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t112 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t11 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t81 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_At12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t94 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t86 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t85 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t87 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t92 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t88 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t90 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t45 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t83 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_At14 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t102 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t05 tRNA-His K14226 tRNA-His; tRNA His
D VPBB_t07 tRNA-His K14226 tRNA-His; tRNA His
D VPBB_t108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPBB_t77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPBB_t78 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At06 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t99 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t111 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t49 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t91 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t89 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t82 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t84 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t93 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t09 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t29 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t20 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t32 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t64 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t67 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t69 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t62 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t06 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t33 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t08 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t40 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t59 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t61 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t48 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_At07 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_At05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t63 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t66 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t70 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t72 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t104 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t75 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t101 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t13 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t79 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t95 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t36 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t38 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t37 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t39 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t103 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t42 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_At04 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t97 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t03 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t110 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t41 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_0730 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPBB_2372 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_0584 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_0995 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPBB_1736 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPBB_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPBB_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPBB_1204 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPBB_1037 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPBB_1076 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPBB_1903 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPBB_2876 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VPBB_2466 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPBB_0698 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPBB_0508 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPBB_0490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPBB_0816 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPBB_2148 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPBB_0580 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPBB_1215 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPBB_1216 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPBB_A0340 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_2295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_1024 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPBB_2655 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vpb03060]
D VPBB_0290 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPBB_2766 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPBB_2285 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPBB_0563 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_A1109 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_0564 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_A1108 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_0562 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPBB_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPBB_0447 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPBB_2682 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPBB_2356 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPBB_2794 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D VPBB_0093 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPBB_0094 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPBB_0095 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VPBB_2396 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VPBB_0509 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vpb04122]
D VPBB_0568 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPBB_1126 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_A1075 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPBB_0024 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VPBB_2630 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VPBB_2631 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VPBB_2632 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VPBB_1485 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VPBB_1057 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VPBB_1928 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VPBB_1933 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VPBB_1929 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D VPBB_A1071 Molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VPBB_1930 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VPBB_1932 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VPBB_0662 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPBB_2855 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D VPBB_2856 Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vpb03018]
D VPBB_0496 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VPBB_1896 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPBB_2835 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPBB_2278 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VPBB_A0361 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0789 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_0862 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0532 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0539 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_2658 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPBB_A0556 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPBB_2839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_2156 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_2833 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_0625 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPBB_A0266 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2701 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPBB_0547 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPBB_0552 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VPBB_2328 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vpb03030]
D VPBB_1583 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2726 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0733 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1744 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2108 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0067 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2223 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2119 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPBB_1998 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPBB_1882 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPBB_0696 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPBB_2465 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPBB_0011 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPBB_2593 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VPBB_0388 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_0172 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPBB_2109 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPBB_2120 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vpb03410]
D VPBB_1945 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VPBB_0477 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VPBB_2446 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VPBB_0196 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VPBB_A0038 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPBB_1105 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VPBB_0954 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VPBB_0476 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_0488 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vpb03420]
D VPBB_0928 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VPBB_2532 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VPBB_1937 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VPBB_1786 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VPBB_2844 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vpb03430]
D VPBB_2376 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VPBB_2669 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VPBB_0495 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VPBB_2844 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPBB_1225 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VPBB_0586 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VPBB_0658 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VPBB_0488 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_2119 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPBB_0011 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPBB_1998 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPBB_0696 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPBB_1882 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPBB_1583 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2726 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0733 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1744 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2108 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0067 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2223 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2465 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPBB_2600 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_2559 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vpb03440]
D VPBB_0488 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_0012 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VPBB_2393 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VPBB_1996 Recombination protein RecR K06187 recR; recombination protein RecR
D VPBB_2374 RecA protein K03553 recA; recombination protein RecA
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_0998 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VPBB_0999 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VPBB_0996 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VPBB_0148 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VPBB_2203 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VPBB_2204 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPBB_2168 RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPBB_2202 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPBB_2119 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPBB_0011 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPBB_1998 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPBB_0696 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPBB_1882 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPBB_1583 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2726 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0733 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1744 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2108 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0067 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2223 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2465 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPBB_0267 Helicase PriA essential for oriC K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VPBB_2597 Primosomal replication protein N K02686 priB; primosomal replication protein N
D VPBB_0956 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vpb03250]
D VPBB_2185 Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vpb02010]
D VPBB_1408 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VPBB_1407 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D VPBB_A0964 Nitrate ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPBB_A0963 Nitrate ABC transporter permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPBB_A0962 Nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPBB_A0124 Hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPBB_A0125 Hydroxymethylpyrimidine ABC transporter transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPBB_A0126 Hydroxymethylpyrimidine ABC transporter ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VPBB_A0852 Molybdenum ABC transporter periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VPBB_A0851 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPBB_A0543 ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D VPBB_A0218 Ferric iron ABC transporter iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPBB_2317 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPBB_A0220 Ferric iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D VPBB_2316 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPBB_A0219 Ferric iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPBB_2315 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPBB_0326 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VPBB_0327 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D VPBB_0328 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VPBB_1431 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_1432 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_A0339 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_1434 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VPBB_1435 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VPBB_A1015 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPBB_1587 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPBB_1586 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPBB_A1014 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPBB_1585 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPBB_A1013 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPBB_A1274 ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPBB_A1273 ABC transporter permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VPBB_A1272 ABC transporter permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VPBB_A1275 transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VPBB_2480 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VPBB_2481 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VPBB_2482 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VPBB_A1527 ABC-type sugar transport system periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPBB_A0988 Ribose ABC transport system periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPBB_A0989 Ribose ABC transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VPBB_A0990 Ribose ABC transport system ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VPBB_A0991 Ribose ABC transport system high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VPBB_A1535 L-arabinose-binding periplasmic protein precursor AraF K10537 araF; L-arabinose transport system substrate-binding protein
D VPBB_A1533 L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D VPBB_A1534 L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VPBB_A1334 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_A0552 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_0545 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_A1333 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPBB_0548 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPBB_A1332 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPBB_0549 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPBB_A1331 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPBB_0550 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPBB_A0586 Arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VPBB_A0588 Arginine ABC transporter permease protein ArtM K09998 artM; arginine transport system permease protein
D VPBB_A0587 Arginine ABC transporter permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VPBB_A0585 Arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_1479 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VPBB_1480 Glutamate Aspartate transport system permease protein GltJ K09970 aapQ; general L-amino acid transport system permease protein
D VPBB_1481 Glutamate Aspartate transport system permease protein GltK K09971 aapM; general L-amino acid transport system permease protein
D VPBB_1482 ABC-type polar amino acid transport system, ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_0008 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VPBB_0007 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VPBB_0006 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VPBB_0950 Lysine-arginine-ornithine-binding periplasmic protein precursor K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VPBB_0952 Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D VPBB_0951 Arginine ornithine ABC transporter, permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VPBB_0949 Arginine ornithine ABC transporter, ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_A1049 Branched-chain amino acid ABC transporter amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPBB_A1051 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPBB_A1050 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPBB_A1053 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPBB_A1048 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPBB_0675 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPBB_0386 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPBB_0677 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VPBB_1927 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_A1588 Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1269 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1926 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1268 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1925 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_1267 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_A1365 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1924 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1266 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1923 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1265 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1097 Peptide transport periplasmic protein sapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPBB_1096 Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D VPBB_1095 Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D VPBB_1094 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPBB_1861 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D VPBB_0162 ABC-type oligopeptide transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D VPBB_0160 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VPBB_0161 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VPBB_A1519 Ferrichrome ABC transporter periplasmic iron-binding protein PvuB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPBB_A1517 Ferrichrome ABC transporter (permease) PvuD K23182 fecD; ferric citrate transport system permease protein
D VPBB_A1518 Ferrichrome ABC transporter (permease) PvuC K23183 fecC; ferric citrate transport system permease protein
D VPBB_A1516 Ferrichrome ABC transporter (ATP binding subunit) PvuE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPBB_A1310 Ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPBB_A1311 Ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VPBB_A1309 Ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VPBB_0456 Vitamin B12 ABC transporter, B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VPBB_1235 Vitamin B12 ABC transporter, permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VPBB_1236 Vitamin B12 ABC transporter, ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VPBB_0810 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VPBB_A0151 Cation ABC transporter periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPBB_0808 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D VPBB_A0153 ABC transporter in pyoverdin gene cluster permease component K09816 znuB; zinc transport system permease protein
D VPBB_0809 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPBB_0930 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VPBB_0932 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VPBB_0931 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VPBB_2038 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE K02196 ccmD; heme exporter protein D
D VPBB_2039 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D VPBB_2040 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D VPBB_2041 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VPBB_2463 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VPBB_2462 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D VPBB_2488 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VPBB_2792 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPBB_2793 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPBB_0935 Lipid A export ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VPBB_1343 putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1567 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1307 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1585 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPBB_A1317 putative transport protein MfpB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPBB_1173 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VPBB_A0206 Macrolide export protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:vpb02060]
D VPBB_0758 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VPBB_0759 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_1880 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_A1530 PTS system glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_0788 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPBB_0681 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPBB_A1592 PTS system N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPBB_A0454 PTS system mannitol-specific cryptic IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPBB_A0455 PTS system mannitol-specific cryptic IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPBB_0377 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPBB_2455 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPBB_2457 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPBB_2456 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPBB_A0213 PTS system IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPBB_A0212 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPBB_A0211 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPBB_A0760 Fructose-specific phosphocarrier protein HPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VPBB_0373 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D VPBB_A0758 PTS system fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPBB_A0278 PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPBB_A0759 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VPBB_0497 Phosphocarrier protein kinase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VPBB_2493 Phosphocarrier protein, nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VPBB_2491 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPBB_A1294 Putative PTS system nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vpb03070]
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_1552 Type III secretion cytoplasmic protein (YscF) K03221 yscF; type III secretion protein F
D VPBB_1529 Type III secretion spans bacterial envelope protein (YscO) K04056 yscO; type III secretion protein O
D VPBB_1530 Type III secretion protein (YscP) K04057 yscP; type III secretion protein P
D VPBB_1524 Type III secretion protein SctX K04059 yscX; type III secretion protein X
D VPBB_1555 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D VPBB_A1217 T3SS2 secretion system EscC-like protein K03219 yscC; type III secretion protein C
D VPBB_1527 Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) K04058 yscW; type III secretion protein W
D VPBB_1548 Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D VPBB_1532 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR, flagellar export protein-like protein) K03226 yscR; type III secretion protein R
D VPBB_1533 Type III secretion inner membrane protein (YscS, flagellar export protein-like protein) K03227 yscS; type III secretion protein S
D VPBB_1534 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1 flagellar export protein-like protein) K03228 yscT; type III secretion protein T
D VPBB_1535 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) K03229 yscU; type III secretion protein U
D VPBB_1522 Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D VPBB_A1232 T3SS2 inner membrane channel protein (LcrD HrcV EscV SsaV) K03230 yscV; type III secretion protein V
D VPBB_1528 Type III secretion ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPBB_A1216 T3SS2 ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPBB_1531 Type III secretion inner membrane protein (YscQ flagellar export protein-like protein) K03225 yscQ; type III secretion protein Q
D VPBB_1546 Type III secretion cytoplasmic protein (YscL) K03223 yscL; type III secretion protein L
D VPBB_0123 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPBB_0122 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPBB_0125 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPBB_0126 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPBB_0127 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPBB_0128 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPBB_0129 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPBB_0130 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPBB_0131 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPBB_0132 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPBB_0124 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPBB_0563 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_A1109 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_0564 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_A1108 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_2766 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPBB_2285 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPBB_0290 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPBB_0562 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPBB_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPBB_0447 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPBB_2794 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D VPBB_2682 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPBB_2356 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPBB_0093 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPBB_0094 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPBB_0095 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VPBB_1310 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPBB_A0932 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPBB_A0933 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D VPBB_1309 TypeVI secretion Hcp protein, biofilm development K11903 hcp; type VI secretion system secreted protein Hcp
D VPBB_A0948 Type VI secretion protein K11906 vasD; type VI secretion system protein VasD
D VPBB_1327 Type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD
D VPBB_A0945 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPBB_1323 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPBB_A0946 Type VI secretion system family protein K11892 impK; type VI secretion system protein ImpK
D VPBB_1329 Outer membrane protein ImpK K11892 impK; type VI secretion system protein ImpK
D VPBB_A0934 ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D VPBB_1308 ClpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vpb02020]
D VPBB_0544 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPBB_0543 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VPBB_1983 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_A0977 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_1186 Phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPBB_A1334 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_A0552 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_0545 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_0145 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPBB_0144 Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VPBB_2709 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPBB_2708 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_A0137 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_A1157 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPBB_A1156 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D VPBB_0416 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPBB_0369 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPBB_0368 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPBB_A0437 efflux RND transporter membrane fusion protein CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPBB_A0436 Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein
D VPBB_1594 Sensor protein basS K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPBB_1593 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPBB_A1415 LafA lateral flagellin protein K02406 fliC; flagellin
D VPBB_0754 Polar flagellin protein FlaC K02406 fliC; flagellin
D VPBB_0755 Polar flagellin protein FlaD K02406 fliC; flagellin
D VPBB_0756 Polar flagellin protein FlaE K02406 fliC; flagellin
D VPBB_2076 Polar flagellin protein FlaA K02406 fliC; flagellin
D VPBB_2077 Polar flagellin protein FlaB K02406 fliC; flagellin
D VPBB_2078 Flagellin protein FlaF K02406 fliC; flagellin
D VPBB_A1421 FliA lateral flagellar RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2050 Polar flagellar RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_0659 Polar Na+-driven flagellar motor protein MotA (PomA) K02556 motA; chemotaxis protein MotA
D VPBB_A1422 MotA lateral flagellar H+-driven motor rotation protein K02556 motA; chemotaxis protein MotA
D VPBB_A1305 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPBB_A0622 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPBB_0982 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VPBB_1087 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPBB_1088 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPBB_0981 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPBB_0466 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPBB_0468 Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VPBB_1513 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VPBB_1512 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VPBB_1511 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VPBB_A0492 Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPBB_0010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPBB_A0625 hypothetical protein K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D VPBB_A0893 C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VPBB_1182 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VPBB_1748 DNA-binding response regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPBB_A1096 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPBB_A1095 response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VPBB_2690 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPBB_2691 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPBB_2692 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPBB_2693 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPBB_A0771 Phosphoglycerate transporter protein PgtP K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPBB_A0878 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPBB_A0877 Sensor histidine protein kinase UhpB glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPBB_A0876 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VPBB_A0875 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VPBB_2390 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPBB_1787 BarA-associated response regulator UvrY (GacA SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPBB_2370 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPBB_A0679 VbsS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPBB_A0684 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPBB_A1373 Fimbrial-like tip adhesin CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPBB_A1376 Fimbrial-like subunit CSuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPBB_A1375 Fimbrial-like chaperone protein K07346 fimC; fimbrial chaperone protein
D VPBB_A1374 Fimbrial-like usher protein CsuD K07347 fimD; outer membrane usher protein
D VPBB_A0662 Flp pilus assembly protein pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D VPBB_2249 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPBB_2247 Flp pilus assembly protein RcpC K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0663 Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0664 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_2246 Type II/IV secretion system secretin RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_A0666 Type II/IV secretion system ATPase TadZ/CpaE associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPBB_2241 Type II/IV secretion system ATPase TadZ K02282 cpaE; pilus assembly protein CpaE
D VPBB_A0667 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_2240 Type II/IV secretion system ATP hydrolase TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_A0668 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPBB_2239 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPBB_A0669 Type II/IV secretion system protein TadC associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D VPBB_2238 Type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D VPBB_2136 [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VPBB_2115 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VPBB_0109 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPBB_0108 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0772 Phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D VPBB_A0773 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPBB_A0774 Phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VPBB_A1580 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_0873 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_A0171 Two component Sigma-54 Specific central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPBB_0872 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPBB_2489 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPBB_2345 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPBB_0741 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPBB_1979 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0405 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0021 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0910 Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1395 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1088 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1487 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2449 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1322 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1335 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1735 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0446 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0464 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1362 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0918 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1745 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0501 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0509 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1819 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0559 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1018 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2677 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1515 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0190 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1112 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0786 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0544 Aerotaxis methyl accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPBB_A1083 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPBB_2043 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_2044 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_2047 Chemotaxis histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPBB_1294 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPBB_2046 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPBB_1873 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0687 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_0740 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0400 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A1121 Autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPBB_A1120 Autoinducer 2 sensor K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPBB_A0654 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPBB_1807 Autoinducer 1 sensor kinase K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPBB_1935 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPBB_1379 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPBB_1936 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPBB_2338 Quorum-sensing regulator OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPBB_0868 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VPBB_0869 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VPBB_0870 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VPBB_1847 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_1127 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_1846 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPBB_1128 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPBB_1850 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPBB_1848 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPBB_1849 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPBB_2071 Polar flagellar regulatory protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPBB_2069 Polar flagellar regulatory protein FlaM K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1405 LafK sigma 54-dependent lateral flagellar regulatory protein K10943 flrC; two-component system, response regulator FlrC
D VPBB_1803 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2647 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2443 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPBB_0422 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VPBB_0423 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPBB_0424 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPBB_A1044 hypothetical protein K08738 CYC; cytochrome c
D VPBB_1449 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VPBB_1448 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VPBB_1447 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VPBB_1446 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VPBB_A1038 putative Cytochrome bd2 subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPBB_1000 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPBB_A1039 putative Cytochrome bd2 subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPBB_1001 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_A1465 Polysaccharide export lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D VPBB_A1466 Low molecular weight protein-tyrosine-phosphatase Wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VPBB_1898 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VPBB_A1467 Tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VPBB_0230 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VPBB_0231 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VPBB_A0007 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPBB_A0241 FlgM lateral flagellar anti-sigma factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPBB_0738 Negative regulator of flagellin synthesis polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vpb04148]
D VPBB_A1499 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VPBB_0422 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vpb02024]
D VPBB_2359 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPBB_A1121 Autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPBB_A1120 Autoinducer 2 sensor K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPBB_1806 N-(3-hydroxybutanoyl)-L-homoserine lactone synthase LuxM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VPBB_1807 Autoinducer 1 sensor kinase K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPBB_A0655 8-amino-7-oxononanoate synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPBB_A0654 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPBB_1935 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPBB_1379 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPBB_1936 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPBB_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPBB_2338 Quorum-sensing regulator OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPBB_2619 Transcriptional regulator, PadR family, AphA K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPBB_1797 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPBB_1798 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VPBB_1476 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_A1085 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_0520 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPBB_1594 Sensor protein basS K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPBB_1593 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPBB_A1305 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPBB_1607 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VPBB_A0326 Ferric iron ABC transporter iron-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPBB_1256 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPBB_A0323 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPBB_1261 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPBB_A0324 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPBB_1260 Spermidine Putrescine ABC transporter permease component PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPBB_A0322 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPBB_1259 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPBB_A1049 Branched-chain amino acid ABC transporter amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPBB_A1051 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPBB_A1050 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPBB_A1053 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPBB_A1048 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPBB_0824 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1052 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1804 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_0359 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1803 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2647 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2587 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPBB_1762 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_A0005 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPBB_0649 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VPBB_1927 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_A1588 Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1269 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1926 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1268 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1925 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_1267 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_A1365 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1924 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1266 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1923 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1265 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_0044 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPBB_2305 (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPBB_0045 Peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPBB_2306 (GlcNAc)2 ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPBB_0046 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPBB_2307 (GlcNAc)2 ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPBB_0043 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPBB_2308 (GlcNAc)2 ABC transporter, ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPBB_2309 (GlcNAc)2 ABC transporter, ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPBB_A0003 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPBB_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPBB_A0209 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPBB_2766 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPBB_2285 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPBB_0290 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPBB_0562 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPBB_0447 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPBB_2794 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D VPBB_2682 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPBB_2356 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vpb05111]
D VPBB_2359 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPBB_A1120 Autoinducer 2 sensor K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPBB_A1121 Autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPBB_A0655 8-amino-7-oxononanoate synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPBB_A0654 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPBB_1935 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPBB_1379 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPBB_1936 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPBB_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPBB_2619 Transcriptional regulator, PadR family, AphA K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPBB_2003 Cyn operon transcriptional activator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VPBB_A1320 Transcriptional regulator CpsS K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VPBB_0491 Capsule transcriptional regulator CpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VPBB_0230 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VPBB_0231 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VPBB_2684 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPBB_A1276 Capsular polysaccharide synthesis enzyme CpsA sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VPBB_A1277 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VPBB_A1278 Capsular polysaccharide synthesis enzyme CpsC polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPBB_A1279 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPBB_A1286 hypothetical protein CpsK K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D VPBB_0122 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPBB_0123 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPBB_0124 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPBB_0125 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPBB_0126 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPBB_0127 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPBB_0128 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPBB_0129 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPBB_0130 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPBB_0131 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPBB_0132 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPBB_0133 General secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VPBB_0778 Transcriptional activator ToxR K10921 toxR; cholera toxin transcriptional activator
D VPBB_0777 Transmembrane regulatory protein ToxS K10922 toxS; transmembrane regulatory protein ToxS
D VPBB_2292 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPBB_A0641 Accessory colonization factor AcfA K10936 acfA; accessory colonization factor AcfA
D VPBB_A1251 Accessory colonization factor AcfD precursor K10939 acfD; accessory colonization factor AcfD
D VPBB_2338 Quorum-sensing regulator OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPBB_A0695 Vibriolysin extracellular zinc protease @ Pseudolysin extracellular zinc protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VPBB_2390 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPBB_1787 BarA-associated response regulator UvrY (GacA SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPBB_2370 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_1880 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_A1530 PTS system glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_2824 Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VPBB_1803 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2647 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2733 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPBB_1912 GGDEF family protein K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D VPBB_A0061 GGDEF family protein K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D VPBB_0910 GGDEF family member K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D VPBB_1352 GGDEF family protein K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D VPBB_A0816 GGDEF & EAL family protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_2809 putative signal transduction protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_2816 GGDEF & EAL family protein with FIST domain K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_2272 GGDEF & EAL family protein K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_A0992 GGDEF & EAL family member K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_2521 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VPBB_A0688 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPBB_2517 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPBB_2515 MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VPBB_2514 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VPBB_2071 Polar flagellar regulatory protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPBB_2489 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPBB_2377 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VPBB_2069 Polar flagellar regulatory protein FlaM K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1405 LafK sigma 54-dependent lateral flagellar regulatory protein K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1421 FliA lateral flagellar RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2050 Polar flagellar RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vpb02030]
D VPBB_1979 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0405 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0021 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0910 Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1395 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1088 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1487 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2449 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1322 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1335 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1735 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0446 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0464 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1362 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0918 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1745 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0501 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0509 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1819 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0559 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1018 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2677 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1515 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0190 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1112 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0786 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0544 Aerotaxis methyl accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPBB_A1083 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPBB_A1274 ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPBB_A0988 Ribose ABC transport system periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPBB_2047 Chemotaxis histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPBB_2043 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_2044 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_1294 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPBB_2048 Chemotaxis phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VPBB_2588 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VPBB_2046 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPBB_1873 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0687 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_0740 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0400 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_0741 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPBB_A1402 FliG lateral flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VPBB_2066 Polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPBB_2060 Polar flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPBB_A1408 FliN lateral fgellar motor protein K02417 fliN; flagellar motor switch protein FliN
D VPBB_2059 Polar flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPBB_0659 Polar Na+-driven flagellar motor protein MotA (PomA) K02556 motA; chemotaxis protein MotA
D VPBB_A1422 MotA lateral flagellar H+-driven motor rotation protein K02556 motA; chemotaxis protein MotA
D VPBB_0660 Polar Na+-driven flagellar motor protein MotB (PomB) K02557 motB; chemotaxis protein MotB
D VPBB_A1423 MotB lateral flagellar H+-driven motor rotation protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vpb02040]
D VPBB_A1404 FliE lateral flagellar hook-basal body MS-ring-rod junction protein K02408 fliE; flagellar hook-basal body complex protein FliE
D VPBB_2068 Polar flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPBB_A1403 FliF lateral flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VPBB_2067 Polar flagellar MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPBB_A1402 FliG lateral flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VPBB_2066 Polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPBB_A1401 FliH lateral flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VPBB_2065 Polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPBB_A1400 FliI lateral flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_2064 Polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_2063 Polar flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VPBB_A1419 FliK lateral flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D VPBB_2062 Polar flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPBB_A1420 FliL lateral flagellar protein K02415 fliL; flagellar protein FliL
D VPBB_2788 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPBB_2061 Polar flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPBB_2060 Polar flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPBB_A1408 FliN lateral fgellar motor protein K02417 fliN; flagellar motor switch protein FliN
D VPBB_2059 Polar flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPBB_2058 Polar flagellar biosynthesis FliO K02418 fliO; flagellar protein FliO/FliZ
D VPBB_A1409 FliP lateral flagellar protein K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_2057 Polar flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_A1410 FliQ lateral flagellar protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_2056 Polar flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_A1411 FliR lateral flagellar protein K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_2055 Polar flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_A1413 FlhA lateral flagellar protein K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_2053 Polar flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_A1412 FlhB lateral flagellar protein K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_2054 Polar flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_A0242 FlgA lateral flagellar protein P-ring assembly K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPBB_0739 Polar flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPBB_A0243 FlgB lateral flagellar proximal rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D VPBB_0742 Polar flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPBB_A0244 FlgC lateral flagellar proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D VPBB_0743 Polar flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPBB_A0245 FlgD lateral flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPBB_0744 Polar flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPBB_A0246 FlgE lateral flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D VPBB_0745 Polar flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPBB_A0247 FlgF lateral flagellar proximal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D VPBB_0747 Polar flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPBB_A0248 FlgG lateral flagellar distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D VPBB_0748 Polar flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPBB_A0249 FlgH lateral flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D VPBB_0749 Polar flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPBB_A0250 FlgI lateral flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D VPBB_0750 Polar flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPBB_A0251 FlgJ lateral flagellar peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPBB_0751 Polar flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPBB_A0252 FlgK lateral flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D VPBB_0752 Polar flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPBB_A0253 FlgL lateral flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPBB_0753 Polar flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPBB_0735 Polar flagellar protein FlgO K24344 flgO; flagellar H-ring protein FlgO
D VPBB_0736 Polar flagellar protein FlgP K09860 flgP; outer membrane protein FlgP
D VPBB_0733 Polar flagellar protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D VPBB_2661 Polar Na+-driven flagellar motor protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPBB_1948 Polar Na+-driven flagellar motor protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPBB_A1406 MotY lateral flagellar H+-driven motor protein K21218 motY; sodium-type flagellar protein MotY
D VPBB_A1415 LafA lateral flagellin protein K02406 fliC; flagellin
D VPBB_0754 Polar flagellin protein FlaC K02406 fliC; flagellin
D VPBB_0755 Polar flagellin protein FlaD K02406 fliC; flagellin
D VPBB_0756 Polar flagellin protein FlaE K02406 fliC; flagellin
D VPBB_2076 Polar flagellin protein FlaA K02406 fliC; flagellin
D VPBB_2077 Polar flagellin protein FlaB K02406 fliC; flagellin
D VPBB_2078 Flagellin protein FlaF K02406 fliC; flagellin
D VPBB_A1416 FliD lateral flagellar distal cap protein K02407 fliD; flagellar hook-associated protein 2
D VPBB_2074 Polar flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPBB_A1417 FliS lateral flagellar chaperone protein K02422 fliS; flagellar secretion chaperone FliS
D VPBB_2072 Polar flagellar regulatory protein FlaJ K02422 fliS; flagellar secretion chaperone FliS
D VPBB_0659 Polar Na+-driven flagellar motor protein MotA (PomA) K02556 motA; chemotaxis protein MotA
D VPBB_A1422 MotA lateral flagellar H+-driven motor rotation protein K02556 motA; chemotaxis protein MotA
D VPBB_0660 Polar Na+-driven flagellar motor protein MotB (PomB) K02557 motB; chemotaxis protein MotB
D VPBB_A1423 MotB lateral flagellar H+-driven motor rotation protein K02557 motB; chemotaxis protein MotB
D VPBB_A0241 FlgM lateral flagellar anti-sigma factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPBB_0738 Negative regulator of flagellin synthesis polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPBB_A0240 FlgN lateral flagellar chaperone protein K02399 flgN; flagellar biosynthesis protein FlgN
D VPBB_0737 Polar flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPBB_0387 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VPBB_2071 Polar flagellar regulatory protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPBB_2489 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPBB_2069 Polar flagellar regulatory protein FlaM K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1405 LafK sigma 54-dependent lateral flagellar regulatory protein K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1421 FliA lateral flagellar RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2050 Polar flagellar RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D VPBB_2537 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vpb01501]
D VPBB_2292 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPBB_2186 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VPBB_1927 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_A1588 Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1269 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1926 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1268 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1925 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_1267 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_A1365 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1924 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1266 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1923 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1265 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_0039 Transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VPBB_1019 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_A1090 RND efflux system membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0038 putative Co Zn Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0898 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_1020 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0037 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPBB_A0427 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPBB_A1089 RND efflux system inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_2609 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPBB_0693 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPBB_0434 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vpb01502]
D VPBB_A0831 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPBB_2592 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_A0911 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VPBB_0437 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPBB_0440 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vpb01503]
D VPBB_A1160 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPBB_1097 Peptide transport periplasmic protein sapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPBB_1096 Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D VPBB_1095 Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D VPBB_1094 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPBB_2709 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPBB_2708 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_A0137 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPBB_A1343 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPBB_0416 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPBB_A1152 disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPBB_2888 DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPBB_2185 Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPBB_1019 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_A1090 RND efflux system membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0038 putative Co Zn Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0898 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_1020 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0037 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPBB_A0427 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPBB_A1089 RND efflux system inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_2122 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vpb01000]
C 01001 Protein kinases [BR:vpb01001]
D VPBB_0052 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VPBB_A0954 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VPBB_A1467 Tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VPBB_A1279 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPBB_0544 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPBB_0145 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPBB_A1157 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPBB_2709 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPBB_0369 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPBB_1594 Sensor protein basS K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPBB_A0622 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPBB_0466 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPBB_A1096 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPBB_A0877 Sensor histidine protein kinase UhpB glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPBB_2390 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPBB_A0679 VbsS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPBB_1749 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VPBB_1572 Sensor kinase CitA, DpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VPBB_0513 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VPBB_0109 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPBB_A0773 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPBB_A1580 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_0873 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_1410 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VPBB_2047 Chemotaxis histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPBB_A1120 Autoinducer 2 sensor K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPBB_A0654 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPBB_1807 Autoinducer 1 sensor kinase K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPBB_1847 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_1127 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_A0007 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPBB_2304 Chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vpb01009]
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPBB_2257 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vpb01002]
D VPBB_0509 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VPBB_2348 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPBB_A0661 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPBB_A0536 Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D VPBB_0588 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VPBB_1394 Cell wall-associated hydrolase K13695 nlpC; probable lipoprotein NlpC
D VPBB_2004 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VPBB_0461 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0463 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPBB_0366 Glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPBB_0784 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VPBB_A1223 T3SS2 effector K08598 yopJ; YopJ protease family
D VPBB_2193 DJ-1 protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VPBB_A1343 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPBB_1757 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VPBB_1464 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VPBB_0065 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VPBB_1233 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D VPBB_A0695 Vibriolysin extracellular zinc protease @ Pseudolysin extracellular zinc protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VPBB_A0415 Surface-induced secreted collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPBB_1263 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPBB_2362 Protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VPBB_A1514 putative zinc protease insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VPBB_2464 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VPBB_0575 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VPBB_A1475 Acetylornithine deacetylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D VPBB_2085 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VPBB_A1092 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VPBB_1270 Peptidase, M20A family K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VPBB_0641 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VPBB_1302 Cell wall endopeptidase, family M23 M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_A0469 Cell wall endopeptidase family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_2135 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VPBB_2852 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VPBB_1264 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VPBB_1603 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VPBB_2288 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VPBB_1046 putative protease htpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VPBB_2094 Exported zinc metalloprotease YfgC precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VPBB_2127 Intramembrane protease RasP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VPBB_0538 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_0953 hypothetical protein K21429 impA; immunomodulating metalloprotease
D VPBB_0416 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPBB_0415 Outer membrane stress sensor protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VPBB_A0209 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPBB_A0424 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPBB_A1366 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPBB_A1340 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VPBB_A0156 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VPBB_0690 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1176 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1457 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_2293 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VPBB_0875 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VPBB_0877 ATP-dependent protease La Type I, LonS K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VPBB_1455 Putative protease La-like protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VPBB_2784 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VPBB_2396 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VPBB_1466 Tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VPBB_1972 Protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D VPBB_1868 putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VPBB_2789 GlpG protein (membrane protein of glp regulon) K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VPBB_0264 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VPBB_2637 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPBB_2843 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPBB_A1532 Putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VPBB_0541 Putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VPBB_2274 Putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VPBB_2273 Putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VPBB_2495 PmbA protein K03592 pmbA; PmbA protein
D VPBB_A0129 protein part of proposed proteolytic complex K03592 pmbA; PmbA protein
D VPBB_2503 TldD protein K03568 tldD; TldD protein
D VPBB_A0128 TldD protein part of proposed proteolytic complex K03568 tldD; TldD protein
D VPBB_2664 HflC protein K04087 hflC; modulator of FtsH protease HflC
D VPBB_2665 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vpb01003]
D VPBB_0975 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPBB_A1481 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPBB_2323 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPBB_2609 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vpb01005]
D VPBB_2122 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VPBB_2121 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VPBB_0445 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VPBB_2124 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VPBB_1074 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VPBB_0936 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VPBB_2332 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_1604 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_0187 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPBB_0221 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VPBB_0945 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VPBB_0217 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VPBB_A1160 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPBB_0203 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VPBB_0716 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPBB_0938 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPBB_2485 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPBB_0200 Lipopolysaccharide biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VPBB_0219 ADP-heptose--lipooligosaccharide heptosyltransferase, putative K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VPBB_0201 Lipopolysaccharide heptosyltransferase I K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D VPBB_2104 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VPBB_0679 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VPBB_0407 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VPBB_0222 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpb01011]
D VPBB_2478 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPBB_2770 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPBB_0441 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VPBB_0438 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPBB_0435 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPBB_A0831 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPBB_2592 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_A0911 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPBB_2775 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VPBB_0437 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPBB_0440 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VPBB_0396 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0356 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPBB_0506 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D VPBB_2609 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPBB_2323 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPBB_0693 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPBB_0434 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPBB_0690 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1176 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_A1457 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPBB_2293 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VPBB_A1481 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPBB_A1343 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPBB_1757 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VPBB_0538 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_1302 Cell wall endopeptidase, family M23 M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_A0469 Cell wall endopeptidase family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPBB_0525 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VPBB_2198 Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VPBB_0830 Membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VPBB_2448 Membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VPBB_2112 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VPBB_0635 Transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VPBB_1884 protein YceG like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VPBB_0691 Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VPBB_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPBB_2343 N-acetylmuramoyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPBB_A1342 Outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vpb01004]
D VPBB_1889 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPBB_1890 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPBB_A0883 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPBB_0843 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_2013 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPBB_0840 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_1886 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPBB_A1020 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A1186 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_0841 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1888 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_A0572 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPBB_1456 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VPBB_2123 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPBB_1155 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_A0817 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPBB_A0819 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VPBB_0906 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VPBB_1810 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VPBB_A0651 Fatty acid desaturase Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VPBB_2727 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPBB_1504 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPBB_A1058 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_A0525 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPBB_0824 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1052 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1804 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_0359 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_2785 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPBB_1891 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VPBB_0393 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPBB_2477 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:vpb01006]
D VPBB_0657 Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VPBB_0336 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VPBB_2130 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VPBB_0262 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VPBB_2786 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VPBB_A0493 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0577 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:vpb01007]
D VPBB_0730 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPBB_A0340 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_2295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_1024 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPBB_2655 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPBB_1076 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPBB_0816 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPBB_1903 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPBB_0508 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPBB_2466 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPBB_0698 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPBB_0490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPBB_0995 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPBB_1736 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPBB_0580 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPBB_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPBB_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPBB_1037 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPBB_2148 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPBB_1204 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPBB_2372 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_0584 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_1215 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPBB_1216 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPBB_A0858 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPBB_0017 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VPBB_0885 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPBB_1741 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPBB_1066 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPBB_A1378 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VPBB_1042 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VPBB_2651 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPBB_1629 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPBB_1580 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPBB_1784 Diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPBB_1040 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VPBB_2300 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VPBB_2909 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPBB_A0217 pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VPBB_2534 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPBB_1170 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vpb00194]
D VPBB_2917 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VPBB_2918 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VPBB_2919 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VPBB_2920 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VPBB_2921 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VPBB_2922 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VPBB_2923 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VPBB_2924 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPBB_2925 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vpb03000]
D VPBB_0181 DNA-cytosine methyltransferase() K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPBB_A1540 Arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D VPBB_1558 Type III secretion regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D VPBB_0811 putative transcriptional regulator AraC/XylS K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D VPBB_A0371 Transcriptional regulator AraC family K13652 K13652; AraC family transcriptional regulator
D VPBB_A0038 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPBB_0663 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VPBB_0595 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VPBB_0034 HTH-type transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VPBB_1814 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VPBB_0503 Transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VPBB_2610 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPBB_A0411 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPBB_0555 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPBB_2415 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VPBB_0358 CalR, calcium-responsive transcription factor, LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VPBB_2003 Cyn operon transcriptional activator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VPBB_1030 Cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VPBB_A1555 transcriptional regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VPBB_A0034 Transcriptional regulator LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VPBB_2215 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VPBB_A0986 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VPBB_2222 Galactose operon repressor, GalR-LacI family of transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VPBB_0266 Transcriptional (co)regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VPBB_A0761 Fructose repressor FruR LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VPBB_0680 Trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VPBB_0980 Purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VPBB_0053 Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VPBB_2230 Evolved beta-D-galactosidase transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D VPBB_1201 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VPBB_1906 Transcriptional regulator for fatty acid degradation FadR, GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VPBB_2342 Transcriptional repressor for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VPBB_A1136 putative transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VPBB_0363 Transcriptional regulator SwrZ K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D VPBB_A1018 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D VPBB_0039 Transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VPBB_0188 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VPBB_2338 Quorum-sensing regulator OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPBB_A1288 Transcriptional regulator TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VPBB_A0958 Transcriptional regulator TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VPBB_2780 Unsaturated fatty acid biosynthesis repressor FabR, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VPBB_0066 Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VPBB_1033 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A1569 PutR transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A0084 Transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A1114 Transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_0904 Putative HTH-type transcriptional regulator ybaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VPBB_A0330 Transcriptional regulator VpsT family K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VPBB_A1319 Transcriptional regulator CpsQ K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VPBB_2530 transcriptional regulator, LuxR family K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VPBB_A1320 Transcriptional regulator CpsS K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VPBB_A1486 Transcriptional activator of maltose regulon MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VPBB_A1119 putative transcription regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VPBB_A1544 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VPBB_A0606 HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VPBB_2744 HTH-type transcriptional regulator zntR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VPBB_A0311 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VPBB_A1345 Transcriptional regulator MerR family associated with photolyase K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
D VPBB_0790 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VPBB_2587 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPBB_A0069 Transcriptional regulator KdgR KDG operon repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D VPBB_1803 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_2647 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPBB_1441 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VPBB_0567 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VPBB_2659 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D VPBB_2808 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VPBB_A0452 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VPBB_0504 Transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D VPBB_2619 Transcriptional regulator, PadR family, AphA K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPBB_A1590 Sialic acid utilization regulator RpiR family K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D VPBB_1159 Phosphogluconate repressor HexR, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VPBB_2769 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VPBB_2733 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPBB_0526 Transcriptional repressor protein TrpR K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VPBB_A0808 SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA K11925 sgrR; SgrR family transcriptional regulator
D VPBB_1635 Putrescine utilization regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D VPBB_2892 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D VPBB_2071 Polar flagellar regulatory protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPBB_0491 Capsule transcriptional regulator CpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VPBB_1563 Sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VPBB_1307 Sigma-54 dependent transcriptional regulator, FhlA family K11914 sfa2; sigma-54 dependent transcriptional regulator
D VPBB_1117 Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VPBB_A0106 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D VPBB_2623 Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VPBB_A1577 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPBB_2182 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VPBB_A1599 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPBB_2926 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPBB_0783 Transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VPBB_0333 Arginine pathway regulatory protein ArgR, repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D VPBB_0786 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family K02565 nagC; N-acetylglucosamine repressor
D VPBB_1874 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon K15545 mlc; transcriptional regulator of PTS gene
D VPBB_0375 Mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VPBB_A0123 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D VPBB_1721 Transcriptional repressor protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VPBB_2743 Transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon
D VPBB_2090 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D VPBB_1101 Phage shock protein C K03973 pspC; phage shock protein C
D VPBB_0374 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase operon regulatory protein DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D VPBB_A0900 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VPBB_0171 putative transcriptional regulator K07733 alpA; prophage regulatory protein
D VPBB_2432 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D VPBB_2326 C4-type zinc finger protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VPBB_0648 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D VPBB_0645 Curlin genes transcriptional activator K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vpb03021]
D VPBB_0295 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPBB_2760 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPBB_2759 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPBB_0151 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VPBB_0387 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VPBB_2377 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VPBB_2188 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPBB_2401 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPBB_2489 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPBB_A1421 FliA lateral flagellar RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2050 Polar flagellar RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2501 RNA polymerase associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VPBB_2283 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VPBB_0653 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VPBB_2765 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VPBB_0425 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D VPBB_0426 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D VPBB_A0955 Serine phosphatase RsbU regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D VPBB_A0954 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VPBB_2400 Sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D VPBB_2399 Sigma factor RpoE negative regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB
D VPBB_2398 Sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D VPBB_2326 C4-type zinc finger protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VPBB_2291 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VPBB_0142 Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VPBB_2833 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPBB_A0090 Rho-specific inhibitor of transcription termination (YaeO) K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vpb03019]
D VPBB_1896 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPBB_2506 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VPBB_2395 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPBB_2658 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPBB_2673 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VPBB_2835 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VPBB_A0361 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0789 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_0862 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0532 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0539 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPBB_A0556 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPBB_2839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_2156 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPBB_2278 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VPBB_2833 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPBB_2705 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPBB_0625 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPBB_A0266 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2701 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPBB_0547 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPBB_0552 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VPBB_2328 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VPBB_0496 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VPBB_2370 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPBB_2528 GGDEF & EAL family, MSHA biogenesis protein MshH K18765 csrD; RNase E specificity factor CsrD
D VPBB_0261 Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D VPBB_2470 Ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D VPBB_2492 ATP-binding protein (contains P-loop) K06958 rapZ; RNase adapter protein RapZ
D VPBB_1364 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VPBB_2324 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vpb03011]
D VPBB_1866 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VPBB_2134 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VPBB_0276 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VPBB_0294 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VPBB_0287 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VPBB_2598 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VPBB_2628 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VPBB_0284 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VPBB_0421 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VPBB_0269 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VPBB_0293 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VPBB_2629 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VPBB_0292 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VPBB_0283 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D VPBB_2279 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VPBB_2355 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VPBB_0279 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VPBB_2596 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D VPBB_0274 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VPBB_0505 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VPBB_0390 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VPBB_2763 LSU ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1
D VPBB_0273 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VPBB_0270 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VPBB_0271 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VPBB_0282 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VPBB_0285 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VPBB_2595 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VPBB_2762 LSU ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10
D VPBB_2764 LSU ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11
D VPBB_2761 LSU ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VPBB_0420 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VPBB_0280 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VPBB_0289 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VPBB_0277 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VPBB_0296 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VPBB_0286 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VPBB_2352 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VPBB_1207 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VPBB_0337 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VPBB_0275 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VPBB_0272 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VPBB_0281 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VPBB_0338 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VPBB_0192 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VPBB_0278 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VPBB_0288 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VPBB_0268 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VPBB_2146 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VPBB_1892 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VPBB_0193 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D VPBB_0005 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VPBB_1206 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VPBB_0291 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VPBB_1134 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VPBB_Ar03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r26 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r29 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r23 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r31 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r25 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r28 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_Ar01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r30 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r24 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r27 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_Ar02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vpb03009]
D VPBB_2395 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPBB_2673 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VPBB_2394 GTP-binding protein Era K03595 era; GTPase
D VPBB_0339 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D VPBB_2326 C4-type zinc finger protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VPBB_2283 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VPBB_0653 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VPBB_2765 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VPBB_1139 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VPBB_0345 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VPBB_2877 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VPBB_2303 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VPBB_2795 Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VPBB_2430 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VPBB_1472 Ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VPBB_2928 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VPBB_0432 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VPBB_0431 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VPBB_0068 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VPBB_1980 Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VPBB_2657 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VPBB_2289 Cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VPBB_1248 Ribosomal RNA large subunit methyltransferase F K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VPBB_2183 23S rRNA (guanine-N-2-) -methyltransferase rlmG K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VPBB_0694 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VPBB_1489 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VPBB_0064 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VPBB_1460 23S rRNA (guanine-N-2-) -methyltransferase rlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VPBB_0666 Putative RNA 2'-O-ribose methyltransferase mtfA K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D VPBB_0577 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VPBB_2389 23S rRNA (Uracil-5-) -methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VPBB_2498 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_1113 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_A0055 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_1792 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VPBB_1895 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VPBB_0532 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VPBB_0961 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VPBB_0719 Ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VPBB_2267 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VPBB_1720 Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VPBB_A0162 Ribosomal protein S6 glutaminyl transferase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VPBB_A0700 putative ribosomal-protein-serine N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VPBB_2354 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D VPBB_2731 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VPBB_2021 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VPBB_1896 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPBB_2506 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VPBB_2433 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VPBB_0301 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VPBB_A0556 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPBB_2674 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPBB_A1493 putative GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPBB_0583 GTP-binding protein EngA K03977 engA; GTPase
D VPBB_A0656 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D VPBB_2666 GTP-binding protein HflX K03665 hflX; GTPase
D VPBB_2867 Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VPBB_0150 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VPBB_2281 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VPBB_2284 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D VPBB_A0764 hypothetical protein K14761 rlbA; ribosome-associated protein
D VPBB_0695 Iojap protein K09710 ybeB; ribosome-associated protein
D VPBB_0702 Metal-dependent hydrolase YbeY K07042 ybeY; probable rRNA maturation factor
D VPBB_2290 RNA binding protein K07574 yhbY; RNA-binding protein
D VPBB_A0132 hypothetical protein K14762 yibL; ribosome-associated protein
D VPBB_2496 Putative alpha helix protein K09889 yjgA; ribosome-associated protein
D VPBB_2490 Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D VPBB_0529 Ribosome hibernation protein YfiA K05809 raiA; ribosome-associated inhibitor A
D VPBB_0706 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D VPBB_1893 protein, clustered with ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vpb03016]
D VPBB_0397 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VPBB_0730 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPBB_2148 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPBB_0508 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPBB_0698 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPBB_1903 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPBB_0816 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPBB_0490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPBB_0995 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPBB_2372 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_0584 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPBB_1736 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPBB_1204 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPBB_1037 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPBB_1076 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPBB_2466 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPBB_0580 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPBB_1215 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPBB_1216 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPBB_A0340 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_2295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_1024 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPBB_2655 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPBB_0116 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VPBB_2445 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VPBB_2147 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VPBB_2009 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VPBB_2280 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VPBB_2381 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VPBB_0568 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPBB_2867 Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VPBB_0002 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VPBB_2929 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VPBB_0134 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VPBB_0004 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VPBB_1949 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VPBB_0185 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VPBB_A0555 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VPBB_0825 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VPBB_0524 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VPBB_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPBB_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPBB_0718 YbaK family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VPBB_2417 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VPBB_A0705 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VPBB_0633 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VPBB_2545 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VPBB_2732 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VPBB_1911 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VPBB_0704 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VPBB_0993 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VPBB_0992 tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VPBB_0984 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VPBB_2778 tRNA (Uracil54-C5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VPBB_2353 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VPBB_0149 tRNA (Guanosine18-2'-O-) -methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D VPBB_0566 tRNA:Cm32 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VPBB_2711 tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VPBB_0483 tRNA (adenine37-N(6))-methyltransferase TrmN6 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VPBB_A0130 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D VPBB_0911 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D VPBB_2138 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VPBB_2498 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_1113 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_A0055 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPBB_1057 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VPBB_1439 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VPBB_0024 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VPBB_2630 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VPBB_2631 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VPBB_2632 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VPBB_1485 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VPBB_0570 Iron binding protein IscA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D VPBB_2405 Folate-dependent protein for Fe K06980 ygfZ; tRNA-modifying protein YgfZ
D VPBB_1028 tRNA-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VPBB_2014 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VPBB_0560 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VPBB_1498 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VPBB_1734 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VPBB_1499 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VPBB_0672 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VPBB_2672 Epoxyqueuosine (oQ) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VPBB_0561 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VPBB_0662 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPBB_2117 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VPBB_A1598 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VPBB_0820 putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VPBB_0391 YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VPBB_2671 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VPBB_2197 HesA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VPBB_2658 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPBB_2278 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vpb03012]
D VPBB_A0833 Translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1
D VPBB_2282 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VPBB_1205 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VPBB_2642 Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VPBB_2133 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D VPBB_2767 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_2626 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_A0305 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D VPBB_2627 Translation elongation factor G K02355 fusA; elongation factor G
D VPBB_2254 Translation elongation factor G-like protein K02355 fusA; elongation factor G
D VPBB_0712 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VPBB_2131 Ribosome recycling factor K02838 frr; ribosome recycling factor
D VPBB_0713 Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VPBB_0707 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VPBB_0967 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D VPBB_1790 Translation elongation factor P-related protein K02356 efp; elongation factor P
D VPBB_2695 Translation elongation factor P K02356 efp; elongation factor P
D VPBB_2017 Putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VPBB_2266 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D VPBB_A0500 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:vpb03110]
D VPBB_0965 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VPBB_0534 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VPBB_0876 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VPBB_0263 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPBB_0625 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPBB_0572 Chaperone protein HscA K04044 hscA; molecular chaperone HscA
D VPBB_A0266 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2701 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_0626 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VPBB_0349 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D VPBB_0571 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VPBB_0120 33 kDa chaperonin (Heat shock protein 33) (HSP33) K04083 hslO; molecular chaperone Hsp33
D VPBB_0622 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPBB_0016 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D VPBB_0121 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4-like protein) K04762 hslR; ribosome-associated heat shock protein Hsp15
D VPBB_A0265 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPBB_2702 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPBB_0416 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPBB_2288 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VPBB_2924 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPBB_A1375 Fimbrial-like chaperone protein K07346 fimC; fimbrial chaperone protein
D VPBB_2682 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPBB_2707 P pilus assembly K06006 cpxP; periplasmic protein CpxP/Spy
D VPBB_A1491 Copper metallochaperone bacterial Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D VPBB_A0598 Copper metallochaperone bacterial Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D VPBB_0981 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPBB_1361 Putative oxidoreductase component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D VPBB_A0209 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPBB_0723 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2312 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPBB_2185 Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPBB_1075 Peptidyl-prolyl cis-trans isomerase ppiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VPBB_A0020 Peptidyl-prolyl cis-trans isomerase ppiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VPBB_0879 Peptidyl-prolyl cis-trans isomerase ppiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VPBB_2634 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VPBB_0298 FKBP-type peptidyl-prolyl cis-trans isomerase fklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VPBB_2638 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VPBB_0347 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VPBB_A0884 Thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VPBB_0767 Thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
D VPBB_1157 Glutaredoxin 1 K03674 grxA; glutaredoxin 1
D VPBB_A0357 Glutaredoxin 2 K03675 grxB; glutaredoxin 2
D VPBB_1952 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VPBB_A1152 disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPBB_2888 DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPBB_0487 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPBB_2715 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VPBB_1765 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D VPBB_2035 Cytochrome c-type biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vpb04131]
D VPBB_0576 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPBB_0021 putative transmembrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VPBB_A1130 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPBB_1875 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_A0770 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_0364 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vpb04121]
C 03051 Proteasome [BR:vpb03051]
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vpb03032]
D VPBB_0172 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPBB_2109 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPBB_0181 DNA-cytosine methyltransferase() K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPBB_2749 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPBB_0878 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPBB_1218 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPBB_1865 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPBB_0010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPBB_2593 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VPBB_0388 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_2119 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPBB_0011 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPBB_2465 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPBB_0696 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPBB_1882 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPBB_1583 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2726 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0733 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1744 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2108 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0067 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2223 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1998 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPBB_2120 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPBB_2600 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_2559 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_0795 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VPBB_1773 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VPBB_0013 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VPBB_0414 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPBB_0413 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPBB_0973 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VPBB_1969 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vpb03036]
D VPBB_0181 DNA-cytosine methyltransferase() K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPBB_2395 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPBB_1060 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VPBB_2749 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPBB_0878 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPBB_1218 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPBB_1865 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPBB_0010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPBB_0428 Phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VPBB_A0510 Non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D VPBB_A0409 Non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D VPBB_2733 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPBB_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPBB_2415 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VPBB_1033 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A1569 PutR transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A0084 Transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_A1114 Transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPBB_1963 Nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D VPBB_0987 Chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D VPBB_0986 Chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D VPBB_0985 Chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D VPBB_0443 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VPBB_2793 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPBB_0434 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPBB_1034 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VPBB_0433 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D VPBB_0442 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VPBB_0439 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VPBB_2792 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPBB_0444 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPBB_0762 Cell division protein ZipA K03528 zipA; cell division protein ZipA
D VPBB_2410 Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D VPBB_0260 Putative cytoplasmic protein K09892 zapB; cell division protein ZapB
D VPBB_1461 hypothetical protein K18657 zapC; cell division protein ZapC
D VPBB_2350 hypothetical protein K18778 zapD; cell division protein ZapD
D VPBB_0419 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D VPBB_0299 hypothetical protein K07269 ytfB; cell division protein YtfB
D VPBB_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPBB_1019 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_A1090 RND efflux system membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0038 putative Co Zn Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0898 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0828 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VPBB_0827 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VPBB_0826 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VPBB_1188 Cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D VPBB_0188 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VPBB_0795 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VPBB_2510 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPBB_2509 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VPBB_2508 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VPBB_0692 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VPBB_A0011 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VPBB_2045 Soj-like, protein partioning protein K03496 parA; chromosome partitioning protein
D VPBB_2927 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPBB_A1599 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPBB_2926 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPBB_0414 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPBB_0413 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPBB_2929 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VPBB_2928 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VPBB_2818 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D VPBB_0486 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VPBB_1902 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VPBB_0100 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vpb03400]
D VPBB_A0039 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VPBB_A1344 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VPBB_0477 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VPBB_2446 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VPBB_1945 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VPBB_0448 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPBB_1396 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPBB_A0288 Nudix-related transcriptional regulator NrtR K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPBB_A0187 Protein related to deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VPBB_A0038 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPBB_1105 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VPBB_0196 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VPBB_0954 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VPBB_0476 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VPBB_0488 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPBB_0763 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPBB_0099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPBB_2532 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VPBB_1937 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VPBB_1786 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VPBB_2844 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPBB_2760 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPBB_2759 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPBB_0295 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPBB_0151 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VPBB_0928 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VPBB_2376 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VPBB_2669 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VPBB_0495 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VPBB_1225 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VPBB_0586 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VPBB_0658 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VPBB_2119 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPBB_0011 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPBB_2465 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPBB_0696 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPBB_1882 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPBB_1583 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2726 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0733 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1744 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2108 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_A0067 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_2223 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPBB_1998 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_2600 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_2559 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_2203 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VPBB_2204 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPBB_2168 RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPBB_2202 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPBB_2374 RecA protein K03553 recA; recombination protein RecA
D VPBB_0998 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VPBB_0999 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VPBB_0996 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VPBB_0267 Helicase PriA essential for oriC K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VPBB_2597 Primosomal replication protein N K02686 priB; primosomal replication protein N
D VPBB_0956 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D VPBB_A0929 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D VPBB_A0930 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D VPBB_2255 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VPBB_0012 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VPBB_0148 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VPBB_2393 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VPBB_1996 Recombination protein RecR K06187 recR; recombination protein RecR
D VPBB_0619 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VPBB_0542 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D VPBB_1138 DNA or RNA helicase of superfamily II K19789 radD; DNA repair protein RadD
D VPBB_1773 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VPBB_0013 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VPBB_0973 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VPBB_2749 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPBB_0878 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPBB_2733 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPBB_1218 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPBB_1865 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPBB_2839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_2156 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPBB_1060 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VPBB_2157 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VPBB_2158 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VPBB_2784 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VPBB_1788 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VPBB_1870 RecA K14160 imuA; protein ImuA
D VPBB_1871 DNA polymerase-like protein K14161 imuB; protein ImuB
D VPBB_1872 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D VPBB_2373 Regulatory protein RecX K03565 recX; regulatory protein
D VPBB_0040 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VPBB_A0618 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VPBB_0819 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VPBB_0958 ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VPBB_1775 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPBB_1776 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vpb03029]
D VPBB_0423 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPBB_2282 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VPBB_1205 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VPBB_2133 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D VPBB_2767 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_2626 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_A0305 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D VPBB_2627 Translation elongation factor G K02355 fusA; elongation factor G
D VPBB_2254 Translation elongation factor G-like protein K02355 fusA; elongation factor G
D VPBB_2394 GTP-binding protein Era K03595 era; GTPase
D VPBB_A0340 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_2295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPBB_0698 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPBB_0995 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPBB_0816 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPBB_0667 minor nuclease C1B isoform precursor K01173 ENDOG; endonuclease G, mitochondrial
D VPBB_2529 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPBB_2126 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VPBB_0625 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPBB_0622 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPBB_A0266 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2701 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_A0265 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPBB_2702 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPBB_0626 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VPBB_0568 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPBB_0571 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VPBB_1952 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VPBB_1902 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VPBB_A0493 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0577 Heme O synthase protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPBB_A0487 Cytochrome oxidase biogenesis protein Cox11-CtaG copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPBB_A0492 Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPBB_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPBB_A0489 Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D VPBB_A1490 Cytochrome oxidase biogenesis protein K07152 SCO1; protein SCO1
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vpb02000]
D VPBB_0935 Lipid A export ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VPBB_1343 putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1567 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1307 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPBB_A1585 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPBB_A1317 putative transport protein MfpB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPBB_1173 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VPBB_A0206 Macrolide export protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D VPBB_1458 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein
D VPBB_A0852 Molybdenum ABC transporter periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VPBB_A0851 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPBB_A0543 ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D VPBB_1408 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VPBB_1407 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D VPBB_A0964 Nitrate ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPBB_A0963 Nitrate ABC transporter permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPBB_A0962 Nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPBB_A0218 Ferric iron ABC transporter iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPBB_2317 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPBB_A0220 Ferric iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D VPBB_2316 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPBB_A0219 Ferric iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPBB_2315 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPBB_0326 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VPBB_0327 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D VPBB_0328 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VPBB_1431 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_1432 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_A0339 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPBB_1434 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VPBB_1435 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VPBB_A0326 Ferric iron ABC transporter iron-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPBB_1256 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPBB_A0323 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPBB_1261 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPBB_A0324 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPBB_1260 Spermidine Putrescine ABC transporter permease component PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPBB_A0322 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPBB_1259 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPBB_A1015 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPBB_1587 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPBB_1586 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPBB_A1014 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPBB_1585 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPBB_A1013 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPBB_A0124 Hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPBB_A0125 Hydroxymethylpyrimidine ABC transporter transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPBB_A0126 Hydroxymethylpyrimidine ABC transporter ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VPBB_1122 ABC transporter, periplasmic substrate-binding protein YnjB K05777 ynjB; putative thiamine transport system substrate-binding protein
D VPBB_1121 ABC transporter, permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein
D VPBB_A1274 ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPBB_A1273 ABC transporter permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VPBB_A1272 ABC transporter permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VPBB_A1275 transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VPBB_A1527 ABC-type sugar transport system periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPBB_A1535 L-arabinose-binding periplasmic protein precursor AraF K10537 araF; L-arabinose transport system substrate-binding protein
D VPBB_A1533 L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D VPBB_A1534 L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VPBB_A0988 Ribose ABC transport system periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPBB_A0989 Ribose ABC transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VPBB_A0990 Ribose ABC transport system ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VPBB_1085 YbbM seven transmembrane helix protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D VPBB_2481 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VPBB_2482 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VPBB_2480 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VPBB_A1334 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_A0552 Phosphate ABC transporter periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_0545 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPBB_A1333 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPBB_0548 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPBB_A1332 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPBB_0549 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPBB_A1331 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPBB_0550 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPBB_A0586 Arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VPBB_A0588 Arginine ABC transporter permease protein ArtM K09998 artM; arginine transport system permease protein
D VPBB_A0587 Arginine ABC transporter permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VPBB_A0585 Arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_1479 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VPBB_1480 Glutamate Aspartate transport system permease protein GltJ K09970 aapQ; general L-amino acid transport system permease protein
D VPBB_1481 Glutamate Aspartate transport system permease protein GltK K09971 aapM; general L-amino acid transport system permease protein
D VPBB_1482 ABC-type polar amino acid transport system, ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_0950 Lysine-arginine-ornithine-binding periplasmic protein precursor K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VPBB_0952 Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D VPBB_0951 Arginine ornithine ABC transporter, permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VPBB_0949 Arginine ornithine ABC transporter, ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_A1049 Branched-chain amino acid ABC transporter amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPBB_A1051 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPBB_A1050 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPBB_A1053 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPBB_A1048 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPBB_0675 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPBB_0386 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPBB_0677 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VPBB_1916 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D VPBB_1915 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D VPBB_1914 Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D VPBB_0008 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VPBB_0007 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VPBB_0006 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VPBB_A0006 ABC-type amino acid transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VPBB_A0767 Cyclohexadienyl dehydratase K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VPBB_A0766 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPBB_A0768 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPBB_A0769 Amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPBB_1927 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_A1588 Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1269 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPBB_1926 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1268 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPBB_1925 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_1267 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPBB_A1365 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1924 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1266 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPBB_1923 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1265 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPBB_1097 Peptide transport periplasmic protein sapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPBB_1096 Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D VPBB_1095 Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D VPBB_1094 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPBB_0044 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPBB_2305 (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPBB_0045 Peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPBB_2306 (GlcNAc)2 ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPBB_0046 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPBB_2307 (GlcNAc)2 ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPBB_0043 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPBB_2308 (GlcNAc)2 ABC transporter, ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPBB_2309 (GlcNAc)2 ABC transporter, ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPBB_A0003 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPBB_1861 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D VPBB_0162 ABC-type oligopeptide transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D VPBB_0160 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VPBB_0161 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VPBB_A1519 Ferrichrome ABC transporter periplasmic iron-binding protein PvuB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPBB_A1517 Ferrichrome ABC transporter (permease) PvuD K23182 fecD; ferric citrate transport system permease protein
D VPBB_A1518 Ferrichrome ABC transporter (permease) PvuC K23183 fecC; ferric citrate transport system permease protein
D VPBB_A1516 Ferrichrome ABC transporter (ATP binding subunit) PvuE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPBB_A1310 Ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPBB_A1311 Ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VPBB_A1309 Ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VPBB_A0392 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D VPBB_A0391 Hemin ABC transporter permease protein K25133 hmuU; heme transport system permease protein
D VPBB_A0390 ABC-type hemin transport system ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VPBB_A0602 Ferric vibriobactin enterobactin transport system substrate-binding protein VctP K25282 yclQ; iron-siderophore transport system substrate-binding protein
D VPBB_A0604 iron(III) ABC transporter permease protein K25283 yclO; iron-siderophore transport system permease protein
D VPBB_A0603 Ferric vibriobactin enterobactin transport system permease protein VctD K25284 yclN; iron-siderophore transport system permease protein
D VPBB_A0605 Ferric vibriobactin enterobactin transport system ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D VPBB_0456 Vitamin B12 ABC transporter, B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VPBB_1235 Vitamin B12 ABC transporter, permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VPBB_1236 Vitamin B12 ABC transporter, ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VPBB_0810 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VPBB_A0151 Cation ABC transporter periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPBB_0808 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D VPBB_A0153 ABC transporter in pyoverdin gene cluster permease component K09816 znuB; zinc transport system permease protein
D VPBB_0809 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPBB_A1354 Substrate-specific component MtsA of methionine-regulated ECF transporter K16924 mtsT; energy-coupling factor transport system substrate-specific component
D VPBB_A1355 Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D VPBB_A1188 Zinc ABC transporter periplasmic-binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D VPBB_A1187 Zinc ABC transporter inner membrane permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D VPBB_2463 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VPBB_2462 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D VPBB_2488 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VPBB_0930 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VPBB_0932 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VPBB_0931 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VPBB_2038 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE K02196 ccmD; heme exporter protein D
D VPBB_2039 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D VPBB_2040 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D VPBB_2041 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VPBB_2792 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPBB_2793 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPBB_A0026 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPBB_1576 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPBB_1575 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPBB_2333 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPBB_A0443 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPBB_A0027 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPBB_2334 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPBB_A0444 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPBB_1833 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_1834 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_0311 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_1150 AttF component of AttEFGH ABC transport system K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_A0820 Putative permease precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_A0014 Lipoprotein releasing system transmembrane protein LolC K02004 ABC.CD.P; putative ABC transport system permease protein
D VPBB_A0506 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_1832 Macrolide export ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_0312 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_1149 AttE component of AttEFGH ABC transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_A0818 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_A0013 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPBB_2676 Transporter, putative K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPBB_1180 Di-and tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPBB_1292 Transporter, putative K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPBB_1387 Multi antimicrobial extrusion protein K26939 norM; MATE family, multidrug efflux pump
D VPBB_A0054 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VPBB_2782 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D VPBB_A1127 Multi antimicrobial extrusion protein K26937 dinF; MATE family, multidrug efflux pump
D VPBB_1148 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VPBB_2704 Multi antimicrobial extrusion protein K26937 dinF; MATE family, multidrug efflux pump
D VPBB_2275 Multi antimicrobial extrusion protein K26937 dinF; MATE family, multidrug efflux pump
D VPBB_A0887 Gamma-aminobutyrate alpha-ketoglutarate aminotransferase K26937 dinF; MATE family, multidrug efflux pump
D VPBB_A0860 Adhesin K26937 dinF; MATE family, multidrug efflux pump
D VPBB_A0646 oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VPBB_2724 putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VPBB_A0875 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VPBB_2211 Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VPBB_A0771 Phosphoglycerate transporter protein PgtP K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPBB_A0878 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPBB_2805 Permease of the major facilitator superfamily K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D VPBB_2186 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VPBB_1140 MFS family multidrug transport protein, bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VPBB_2850 Multidrug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VPBB_A0157 Multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VPBB_A1438 Putative transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D VPBB_A0089 Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VPBB_1239 putative efflux permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VPBB_A0885 Permease of the major facilitator superfamily K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VPBB_0758 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VPBB_0497 Phosphocarrier protein kinase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VPBB_0759 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VPBB_2493 Phosphocarrier protein, nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VPBB_A0760 Fructose-specific phosphocarrier protein HPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VPBB_0373 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D VPBB_0757 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPBB_1880 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_A1530 PTS system glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPBB_0788 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPBB_0681 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPBB_A1592 PTS system N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPBB_A0278 PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPBB_A0758 PTS system fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPBB_A1293 PTS system fructose-specific IIA component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPBB_A0277 PTS system fructose-specific IIA component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPBB_A0454 PTS system mannitol-specific cryptic IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPBB_A0455 PTS system mannitol-specific cryptic IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPBB_0377 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPBB_2455 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPBB_2457 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPBB_2456 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPBB_A0213 PTS system IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPBB_A0212 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPBB_A0211 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPBB_2491 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPBB_A1294 Putative PTS system nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPBB_1995 Aquaporin Z K06188 aqpZ; aquaporin Z
D VPBB_2213 Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D VPBB_1011 putative eukaryotic-type potassium channel K10716 kch; voltage-gated potassium channel
D VPBB_1958 Potassium voltage-gated channel subfamily KQT, possible potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D VPBB_0404 cAMP-dependent Kef-type K+ transport system K10716 kch; voltage-gated potassium channel
D VPBB_A1446 Potassium channel protein K10716 kch; voltage-gated potassium channel
D VPBB_1428 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D VPBB_2318 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D VPBB_A0591 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPBB_A1290 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPBB_0425 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D VPBB_A1327 BatA K07114 yfbK; Ca-activated chloride channel homolog
D VPBB_A1328 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D VPBB_A0635 BatA K07114 yfbK; Ca-activated chloride channel homolog
D VPBB_A0636 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D VPBB_1483 Putative TEGT family carrier transport protein K19416 yccA; modulator of FtsH protease
D VPBB_1083 Formate efflux transporter K06212 focA; formate transporter
D VPBB_A0795 Formate efflux transporter K06212 focA; formate transporter
D VPBB_A0897 Nitrite transporter K21993 fdhC; formate transporter
D VPBB_2418 Protein involved in stability of MscS mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VPBB_1987 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VPBB_A1371 Small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D VPBB_A1139 Magnesium transporter K06213 mgtE; magnesium transporter
D VPBB_2494 Magnesium transporter K06213 mgtE; magnesium transporter
D VPBB_0659 Polar Na+-driven flagellar motor protein MotA (PomA) K02556 motA; chemotaxis protein MotA
D VPBB_A1422 MotA lateral flagellar H+-driven motor rotation protein K02556 motA; chemotaxis protein MotA
D VPBB_0660 Polar Na+-driven flagellar motor protein MotB (PomB) K02557 motB; chemotaxis protein MotB
D VPBB_A1423 MotB lateral flagellar H+-driven motor rotation protein K02557 motB; chemotaxis protein MotB
D VPBB_2661 Polar Na+-driven flagellar motor protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPBB_1948 Polar Na+-driven flagellar motor protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPBB_A1406 MotY lateral flagellar H+-driven motor protein K21218 motY; sodium-type flagellar protein MotY
D VPBB_A0141 proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D VPBB_A0142 Ferric siderophore transport system biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPBB_0156 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPBB_0157 MotA K03561 exbB; biopolymer transport protein ExbB
D VPBB_A0394 Ferric siderophore transport system biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPBB_A0143 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D VPBB_0155 Biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VPBB_1004 MotA K03562 tolQ; biopolymer transport protein TolQ
D VPBB_1005 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D VPBB_2217 Magnesium and cobalt transport protein CorA K16074 zntB; zinc transporter
D VPBB_2859 Protein crcB-like protein K06199 crcB; fluoride exporter
D VPBB_0861 Hemolysins-related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_2750 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_2358 Hemolysins-related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_2292 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPBB_A1507 Maltoporin K02024 lamB; maltoporin
D VPBB_A0227 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPBB_0731 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPBB_A1086 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPBB_0607 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPBB_A0204 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPBB_2030 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPBB_2031 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPBB_A0804 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPBB_2191 Outer membrane protein OmpK K05517 tsx; nucleoside-specific channel-forming protein
D VPBB_A1374 Fimbrial-like usher protein CsuD K07347 fimD; outer membrane usher protein
D VPBB_A1520 Vibrioferrin receptor PvuA K16091 fecA; Fe(3+) dicitrate transport protein
D VPBB_2777 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D VPBB_2423 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VPBB_A0609 Enterobactin receptor VctA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPBB_A0827 heme transport protein HutA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPBB_A1339 TonB-dependent heme receptor HutR K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_0159 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_A1308 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_A1521 Ferric siderophore receptor PsuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_A0891 Aerobactin siderophore receptor IutA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_A0139 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_1491 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPBB_1494 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPBB_A0334 Outer membrane protein OprN K18300 oprN; outer membrane protein, multidrug efflux system
D VPBB_A1278 Capsular polysaccharide synthesis enzyme CpsC polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPBB_A1465 Polysaccharide export lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D VPBB_2126 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VPBB_0582 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) K17713 bamB; outer membrane protein assembly factor BamB
D VPBB_2088 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL) K07287 bamC; outer membrane protein assembly factor BamC
D VPBB_0531 putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) K05807 bamD; outer membrane protein assembly factor BamD
D VPBB_0618 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex K06186 bamE; outer membrane protein assembly factor BamE
D VPBB_0318 Uncharacterized protein YtfM precursor K07278 tamA; translocation and assembly module TamA
D VPBB_0319 Uncharacterized protein YtfN K09800 tamB; translocation and assembly module TamB
D VPBB_A0078 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D VPBB_0724 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D VPBB_2487 LptA, protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D VPBB_2486 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters K11719 lptC; lipopolysaccharide export system protein LptC
D VPBB_0348 Outer membrane protein Imp, required for envelope biogenesis K04744 lptD; LPS-assembly protein
D VPBB_0697 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D VPBB_A1277 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VPBB_1517 Type III secretion host injection protein (YopB) K23475 yopB; transloator
D VPBB_1516 Type III secretion host injection and negative regulator protein (YopD) K23476 yopD; transloator
D VPBB_0701 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D VPBB_A1498 antiporter PotE K03756 potE; putrescine:ornithine antiporter
D VPBB_2741 Cadaverine antiporter membrane protein CadB K03757 cadB; cadaverine:lysine antiporter
D VPBB_1607 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VPBB_A1135 Amino acid transporter K16263 yjeH; amino acid efflux transporter
D VPBB_2706 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D VPBB_A0436 Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein
D VPBB_1020 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0037 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPBB_A0427 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPBB_A1089 RND efflux system inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_2297 RND multidrug efflux transporter K18989 vexF; multidrug efflux pump
D VPBB_A0696 Quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VPBB_0056 Spermidine export protein MdtI K11742 mdtI; spermidine export protein MdtI
D VPBB_0055 Spermidine export protein MdtJ K11743 mdtJ; spermidine export protein MdtJ
D VPBB_2840 Protein rarD K05786 rarD; chloramphenicol-sensitive protein RarD
D VPBB_A0690 putative chloramphenicol-sensitive protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D VPBB_1950 Histidine permease YuiF K07084 yuiF; putative amino acid transporter
D VPBB_0059 Low-affinity gluconate K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VPBB_A0107 D-glycerate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VPBB_2714 C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VPBB_A0893 C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VPBB_A1368 L-lactate permease K03303 lutP; lactate permease
D VPBB_A0328 High-affinity choline uptake protein BetT K05020 opuD; glycine betaine transporter
D VPBB_2484 Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter
D VPBB_A1575 symporter PutP K11928 putP; sodium/proline symporter
D VPBB_2719 Acetate permease ActP K14393 actP; cation/acetate symporter
D VPBB_A1494 SstT K07862 sstT; serine/threonine transporter
D VPBB_A0025 symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D VPBB_A0029 symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D VPBB_1346 putative sodium glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VPBB_1152 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D VPBB_1907 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D VPBB_1960 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D VPBB_1061 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VPBB_2717 Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D VPBB_2538 Na+/H+ antiporter, putative K03316 nhaP; Na+:H+ antiporter
D VPBB_2640 putative Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VPBB_A0420 Glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VPBB_2641 Glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VPBB_A0421 Glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VPBB_0864 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPBB_A1303 K(+)-uptake protein KtrB integral membrane subunit Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPBB_0031 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPBB_2879 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPBB_0863 KtrA K03499 trkA; trk/ktr system potassium uptake protein
D VPBB_A1304 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VPBB_2878 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VPBB_A1141 Cytosine permease K10974 codB; cytosine permease
D VPBB_2099 Uracil permease K02824 uraA; uracil permease
D VPBB_0146 Xanthine permease K16345 xanP; xanthine permease XanP
D VPBB_0642 ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VPBB_A0462 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPBB_1339 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPBB_1730 Serine transporter K03837 sdaC; serine transporter
D VPBB_A0972 Serine transporter K03837 sdaC; serine transporter
D VPBB_1994 Serine transporter K26604 cyuP; cysteine uptake transport protein
D VPBB_A1066 exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D VPBB_2235 Chromate transport protein ChrA K07240 chrA; chromate transporter
D VPBB_2335 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VPBB_1897 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VPBB_0868 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VPBB_0869 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VPBB_0870 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VPBB_A0451 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D VPBB_A0650 Anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VPBB_0506 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D VPBB_1022 Transporter K13936 mdcF; malonate transporter and related proteins
D VPBB_1217 membrane protein K24180 mleP; malate permease and related proteins
D VPBB_2416 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VPBB_2810 homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPBB_A0349 hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPBB_1297 homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPBB_A1106 Putative threonine efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPBB_2842 L-lysine permease K05835 rhtC; threonine efflux protein
D VPBB_A1132 hypothetical protein K05835 rhtC; threonine efflux protein
D VPBB_A0268 Putative threonine efflux protein K05835 rhtC; threonine efflux protein
D VPBB_A0913 putative branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D VPBB_A0480 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D VPBB_A0479 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D VPBB_A0914 putative transmembrane protein K26606 azlD; branched chain amino acid efflux pump
D VPBB_1513 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VPBB_1512 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VPBB_1511 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VPBB_2092 Putative permease PerM (YfgO) K03548 perM; putative permease
D VPBB_2837 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D VPBB_A1463 Multiple antibiotic transporter K05595 marC; multiple antibiotic resistance protein
D VPBB_0439 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VPBB_0021 putative transmembrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VPBB_A0144 Ferric siderophore transport system periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPBB_0154 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPBB_A0395 Ferric siderophore transport system periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPBB_1008 18K peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VPBB_1006 TolA protein K03646 tolA; colicin import membrane protein
D VPBB_1007 tolB protein precursor K03641 tolB; TolB protein
D VPBB_2365 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPBB_2366 Oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VPBB_1843 Membrane protein, suppressor for copper-sensitivity ScsB K08344 scsB; suppressor for copper-sensitivity B
D VPBB_1358 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VPBB_1359 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VPBB_1360 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D VPBB_1088 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPBB_1087 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPBB_0981 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPBB_A0118 Cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPBB_A0119 Biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPBB_1850 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPBB_1848 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPBB_1849 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPBB_A1316 Membrane-fusion protein MfpC K12537 hasE; membrane fusion protein, type I secretion system
D VPBB_A0437 efflux RND transporter membrane fusion protein CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPBB_A1582 ABC-type protease exporter membrane fusion protein (MFP) family component K12542 lapC; membrane fusion protein, adhesin transport system
D VPBB_A0317 Membrane fusion protein of RND family multidrug efflux pump K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPBB_A0426 putative efflux system membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPBB_A0336 putative efflux protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VPBB_1019 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_A1090 RND efflux system membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0038 putative Co Zn Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0898 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_2298 Membrane-fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D VPBB_A0205 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D VPBB_A1279 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPBB_A1467 Tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VPBB_A0984 Ribosyl nicotinamide transporter PnuC-like protein K03811 pnuC; nicotinamide mononucleotide transporter
D VPBB_0813 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VPBB_0814 Ferrous iron transport protein C K10123 feoC; putative ferrous iron transport protein C
D VPBB_0073 Universal stress protein B K06144 uspB; universal stress protein B
D VPBB_1766 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VPBB_2036 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VPBB_2699 membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D VPBB_A0298 Outer membrane protein OmpV K07274 mipA; MipA family protein
D VPBB_1357 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vpb02044]
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_A1317 putative transport protein MfpB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPBB_A1316 Membrane-fusion protein MfpC K12537 hasE; membrane fusion protein, type I secretion system
D VPBB_A1585 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPBB_A1582 ABC-type protease exporter membrane fusion protein (MFP) family component K12542 lapC; membrane fusion protein, adhesin transport system
D VPBB_1491 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPBB_1494 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPBB_0398 General secretion pathway protein A K02450 gspA; general secretion pathway protein A
D VPBB_0399 General secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VPBB_0122 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPBB_0123 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPBB_0124 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPBB_0125 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPBB_0126 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPBB_0127 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPBB_0128 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPBB_0129 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPBB_0130 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPBB_0131 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPBB_0132 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPBB_0133 General secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VPBB_2348 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPBB_2345 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPBB_2346 Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VPBB_2347 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VPBB_0627 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VPBB_1610 Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VPBB_2608 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VPBB_2607 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VPBB_2606 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VPBB_2605 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VPBB_2604 Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VPBB_2435 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VPBB_2434 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VPBB_0631 Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VPBB_0629 Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VPBB_0628 Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D VPBB_2010 hypothetical protein K08086 fimV; pilus assembly protein FimV
D VPBB_A0661 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPBB_2247 Flp pilus assembly protein RcpC K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0663 Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0664 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_2246 Type II/IV secretion system secretin RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_A0666 Type II/IV secretion system ATPase TadZ/CpaE associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPBB_2241 Type II/IV secretion system ATPase TadZ K02282 cpaE; pilus assembly protein CpaE
D VPBB_A0667 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_2240 Type II/IV secretion system ATP hydrolase TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_A0668 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPBB_2239 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPBB_A0669 Type II/IV secretion system protein TadC associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D VPBB_2238 Type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D VPBB_A0670 Flp pilus assembly protein TadD contains TPR repeat K12512 tadD; tight adherence protein D
D VPBB_A0671 Flp pilus assembly membrane protein TadE K12513 tadE; tight adherence protein E
D VPBB_A0672 Flp pilus assembly surface protein K12514 tadF; tight adherence protein F
D VPBB_A0673 Protein TadG associated with Flp pilus assembly K12515 tadG; tight adherence protein G
D VPBB_A0662 Flp pilus assembly protein pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D VPBB_2249 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPBB_A0688 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPBB_2517 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPBB_2515 MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VPBB_2514 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VPBB_2521 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VPBB_2519 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D VPBB_2520 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D VPBB_2527 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D VPBB_2526 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D VPBB_2525 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D VPBB_2524 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D VPBB_2523 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D VPBB_2522 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D VPBB_2513 MSHA biogenesis protein MshO K12285 mshO; MSHA biogenesis protein MshO
D VPBB_2512 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D VPBB_2511 MSHA biogenesis protein MshQ K12287 mshQ; MSHA biogenesis protein MshQ
D VPBB_2438 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D VPBB_0880 DNA uptake protein-related DNA-binding protein K02237 comEA; competence protein ComEA
D VPBB_A1091 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VPBB_0934 Rec2-related protein K02238 comEC; competence protein ComEC
D VPBB_1555 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D VPBB_A1217 T3SS2 secretion system EscC-like protein K03219 yscC; type III secretion protein C
D VPBB_1554 Type III secretion inner membrane protein (YscD, flagellar export protein-like protein) K03220 yscD; type III secretion protein D
D VPBB_1552 Type III secretion cytoplasmic protein (YscF) K03221 yscF; type III secretion protein F
D VPBB_1549 Type III secretion cytoplasmic protein (YscI) K04053 yscI; type III secretion protein I
D VPBB_1548 Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D VPBB_1547 Type III secretion cytoplasmic protein (YscK) K04054 yscK; type III secretion protein K
D VPBB_1546 Type III secretion cytoplasmic protein (YscL) K03223 yscL; type III secretion protein L
D VPBB_1528 Type III secretion ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPBB_A1216 T3SS2 ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPBB_1529 Type III secretion spans bacterial envelope protein (YscO) K04056 yscO; type III secretion protein O
D VPBB_1530 Type III secretion protein (YscP) K04057 yscP; type III secretion protein P
D VPBB_1531 Type III secretion inner membrane protein (YscQ flagellar export protein-like protein) K03225 yscQ; type III secretion protein Q
D VPBB_1532 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR, flagellar export protein-like protein) K03226 yscR; type III secretion protein R
D VPBB_1533 Type III secretion inner membrane protein (YscS, flagellar export protein-like protein) K03227 yscS; type III secretion protein S
D VPBB_1534 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1 flagellar export protein-like protein) K03228 yscT; type III secretion protein T
D VPBB_1535 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) K03229 yscU; type III secretion protein U
D VPBB_1522 Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D VPBB_A1232 T3SS2 inner membrane channel protein (LcrD HrcV EscV SsaV) K03230 yscV; type III secretion protein V
D VPBB_1527 Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) K04058 yscW; type III secretion protein W
D VPBB_1524 Type III secretion protein SctX K04059 yscX; type III secretion protein X
D VPBB_1556 Type III secretion chaperone protein for YopN (SycN,YscB) K04049 yscB; type III secretion protein B
D VPBB_1551 Type III secretion spans bacterial envelope protein (YscG) K04051 yscG; type III secretion protein G
D VPBB_1550 Type III secretion effector protein (YopR, encoded by YscH) K04052 yscH; type III secretion protein H
D VPBB_1523 Chaperone protein YscY (Yop proteins translocation protein Y) K04060 yscY; type III secretion protein Y
D VPBB_A1413 FlhA lateral flagellar protein K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_2053 Polar flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_A1412 FlhB lateral flagellar protein K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_2054 Polar flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_A1403 FliF lateral flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VPBB_2067 Polar flagellar MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPBB_A1401 FliH lateral flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VPBB_2065 Polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPBB_A1400 FliI lateral flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_2064 Polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_A1408 FliN lateral fgellar motor protein K02417 fliN; flagellar motor switch protein FliN
D VPBB_2059 Polar flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPBB_2058 Polar flagellar biosynthesis FliO K02418 fliO; flagellar protein FliO/FliZ
D VPBB_A1409 FliP lateral flagellar protein K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_2057 Polar flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_A1410 FliQ lateral flagellar protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_2056 Polar flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_A1411 FliR lateral flagellar protein K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_2055 Polar flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_0487 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPBB_A0945 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPBB_1323 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPBB_A0946 Type VI secretion system family protein K11892 impK; type VI secretion system protein ImpK
D VPBB_1329 Outer membrane protein ImpK K11892 impK; type VI secretion system protein ImpK
D VPBB_A0947 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D VPBB_1328 Uncharacterized protein ImpJ K11893 impJ; type VI secretion system protein ImpJ
D VPBB_A0935 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D VPBB_1321 Uncharacterized protein ImpH K11895 impH; type VI secretion system protein ImpH
D VPBB_A0936 Protein ImpG/VasA K11896 impG; type VI secretion system protein ImpG
D VPBB_1320 Protein ImpG K11896 impG; type VI secretion system protein ImpG
D VPBB_A0937 Uncharacterized protein ImpF K11897 impF; type VI secretion system protein ImpF
D VPBB_A0940 Uncharacterized protein ImpC K11900 impC; type VI secretion system protein ImpC
D VPBB_1318 Uncharacterized protein ImpC K11900 impC; type VI secretion system protein ImpC
D VPBB_A0941 Uncharacterized protein ImpB K11901 impB; type VI secretion system protein ImpB
D VPBB_1317 Uncharacterized protein ImpB K11901 impB; type VI secretion system protein ImpB
D VPBB_A0942 Uncharacterized protein ImpA K11902 impA; type VI secretion system protein ImpA
D VPBB_A0933 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D VPBB_1309 TypeVI secretion Hcp protein, biofilm development K11903 hcp; type VI secretion system secreted protein Hcp
D VPBB_1310 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPBB_A0932 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPBB_1319 hypothetical protein K11905 K11905; type VI secretion system protein
D VPBB_A0948 Type VI secretion protein K11906 vasD; type VI secretion system protein VasD
D VPBB_1327 Type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD
D VPBB_A0934 ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D VPBB_1308 ClpB protein K11907 vasG; type VI secretion system protein VasG
D VPBB_1316 Uncharacterized protein ImpA K11910 vasJ; type VI secretion system protein VasJ
D VPBB_1324 Uncharacterized protein ImpA K11911 vasL; type VI secretion system protein VasL
D VPBB_A0944 Protein phosphatase ImpM K11890 impM; type VI secretion system protein ImpM
D VPBB_A0949 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D VPBB_1326 Uncharacterized protein ImpI K11894 impI; type VI secretion system protein ImpI
D VPBB_A0938 Protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE
D VPBB_A0939 Uncharacterized protein ImpD K11899 impD; type VI secretion system protein ImpD
D VPBB_1307 Sigma-54 dependent transcriptional regulator, FhlA family K11914 sfa2; sigma-54 dependent transcriptional regulator
D VPBB_A1375 Fimbrial-like chaperone protein K07346 fimC; fimbrial chaperone protein
D VPBB_A1374 Fimbrial-like usher protein CsuD K07347 fimD; outer membrane usher protein
D VPBB_A1373 Fimbrial-like tip adhesin CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPBB_A1376 Fimbrial-like subunit CSuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPBB_0447 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPBB_2682 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPBB_0563 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_A1109 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPBB_2766 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPBB_0564 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_A1108 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPBB_2285 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPBB_0290 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPBB_2356 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPBB_2794 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D VPBB_0562 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPBB_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPBB_0093 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPBB_0094 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPBB_0095 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vpb02042]
D VPBB_2206 Tellurite resistance protein K11041 eta; exfoliative toxin A/B
D VPBB_A1067 Tellurite resistance protein K11041 eta; exfoliative toxin A/B
D VPBB_0861 Hemolysins-related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_2750 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_2358 Hemolysins-related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPBB_A1196 thermostable direct hemolysin K11019 tdh; thermostable direct hemolysin
D VPBB_A1254 thermostable direct hemolysin K11019 tdh; thermostable direct hemolysin
D VPBB_2881 putative membrane protein hemolysin III-like protein K11068 hlyIII; hemolysin III
D VPBB_A0208 lecithin-dependent hemolysin LDH K11018 tlh; thermolabile hemolysin
D VPBB_A0415 Surface-induced secreted collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPBB_1263 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vpb02022]
D VPBB_0544 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPBB_0543 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VPBB_0145 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPBB_0144 Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VPBB_A1157 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPBB_A1156 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D VPBB_2709 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPBB_2708 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_A0137 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPBB_0369 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPBB_0368 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPBB_1594 Sensor protein basS K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPBB_1593 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPBB_A1305 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPBB_A0622 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPBB_0982 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VPBB_0466 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPBB_0468 Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VPBB_A0625 hypothetical protein K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D VPBB_1136 Two-component system response regulator QseB K02483 K02483; two-component system, OmpR family, response regulator
D VPBB_A1529 DNA-binding response regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D VPBB_1748 DNA-binding response regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPBB_A1096 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPBB_A1095 response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VPBB_A0877 Sensor histidine protein kinase UhpB glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPBB_A0876 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VPBB_2390 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPBB_1787 BarA-associated response regulator UvrY (GacA SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPBB_A0679 VbsS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPBB_A0684 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPBB_1749 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VPBB_1572 Sensor kinase CitA, DpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VPBB_1571 Transcriptional regulatory protein CitB, DpiA K02475 K02475; two-component system, CitB family, response regulator
D VPBB_0513 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VPBB_0512 Response regulator of the LytR K02477 K02477; two-component system, LytTR family, response regulator
D VPBB_0109 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPBB_0108 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VPBB_A0773 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPBB_A0774 Phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VPBB_A1580 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_0873 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPBB_A0171 Two component Sigma-54 Specific central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPBB_0872 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPBB_1410 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VPBB_2047 Chemotaxis histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPBB_1294 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPBB_2046 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPBB_1873 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0687 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_0740 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0400 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A1120 Autoinducer 2 sensor K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPBB_A0654 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPBB_1807 Autoinducer 1 sensor kinase K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPBB_1935 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPBB_1379 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPBB_1936 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPBB_1847 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_1127 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPBB_1846 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPBB_1128 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPBB_2069 Polar flagellar regulatory protein FlaM K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1405 LafK sigma 54-dependent lateral flagellar regulatory protein K10943 flrC; two-component system, response regulator FlrC
D VPBB_A0007 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPBB_A0965 putative two-component response regulatory protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D VPBB_2304 Chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vpb02035]
D VPBB_2047 Chemotaxis histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPBB_2043 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_2044 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPBB_2588 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VPBB_0741 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPBB_2046 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPBB_1294 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPBB_2048 Chemotaxis phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VPBB_1873 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0687 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_0740 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_A0400 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPBB_1979 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0405 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0021 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0910 Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1395 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1088 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1487 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2449 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1322 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1335 Methyl-accepting chemotaxis protein I (chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1735 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0446 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0464 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1362 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0918 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1745 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0501 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0509 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1819 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0559 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1018 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_2677 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A1515 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_0190 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_1112 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0786 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPBB_A0544 Aerotaxis methyl accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPBB_A1083 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPBB_A1401 FliH lateral flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VPBB_2065 Polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPBB_A1400 FliI lateral flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_2064 Polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPBB_2063 Polar flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VPBB_2058 Polar flagellar biosynthesis FliO K02418 fliO; flagellar protein FliO/FliZ
D VPBB_A1409 FliP lateral flagellar protein K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_2057 Polar flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPBB_A1410 FliQ lateral flagellar protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_2056 Polar flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPBB_A1411 FliR lateral flagellar protein K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_2055 Polar flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPBB_A1413 FlhA lateral flagellar protein K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_2053 Polar flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPBB_A1412 FlhB lateral flagellar protein K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_2054 Polar flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPBB_A1402 FliG lateral flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VPBB_2066 Polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPBB_2060 Polar flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPBB_A1408 FliN lateral fgellar motor protein K02417 fliN; flagellar motor switch protein FliN
D VPBB_2059 Polar flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPBB_A1403 FliF lateral flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VPBB_2067 Polar flagellar MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPBB_A0250 FlgI lateral flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D VPBB_0750 Polar flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPBB_A0242 FlgA lateral flagellar protein P-ring assembly K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPBB_0739 Polar flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPBB_A0249 FlgH lateral flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D VPBB_0749 Polar flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPBB_A1420 FliL lateral flagellar protein K02415 fliL; flagellar protein FliL
D VPBB_2788 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPBB_2061 Polar flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPBB_A1404 FliE lateral flagellar hook-basal body MS-ring-rod junction protein K02408 fliE; flagellar hook-basal body complex protein FliE
D VPBB_2068 Polar flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPBB_A1419 FliK lateral flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D VPBB_2062 Polar flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPBB_A0243 FlgB lateral flagellar proximal rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D VPBB_0742 Polar flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPBB_A0244 FlgC lateral flagellar proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D VPBB_0743 Polar flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPBB_A0245 FlgD lateral flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPBB_0744 Polar flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPBB_A0247 FlgF lateral flagellar proximal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D VPBB_0747 Polar flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPBB_A0248 FlgG lateral flagellar distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D VPBB_0748 Polar flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPBB_A0251 FlgJ lateral flagellar peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPBB_0751 Polar flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPBB_A0246 FlgE lateral flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D VPBB_0745 Polar flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPBB_A0252 FlgK lateral flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D VPBB_0752 Polar flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPBB_A0253 FlgL lateral flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPBB_0753 Polar flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPBB_A0240 FlgN lateral flagellar chaperone protein K02399 flgN; flagellar biosynthesis protein FlgN
D VPBB_0737 Polar flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPBB_0733 Polar flagellar protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D VPBB_0735 Polar flagellar protein FlgO K24344 flgO; flagellar H-ring protein FlgO
D VPBB_0736 Polar flagellar protein FlgP K09860 flgP; outer membrane protein FlgP
D VPBB_2661 Polar Na+-driven flagellar motor protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPBB_1948 Polar Na+-driven flagellar motor protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPBB_A1406 MotY lateral flagellar H+-driven motor protein K21218 motY; sodium-type flagellar protein MotY
D VPBB_A1415 LafA lateral flagellin protein K02406 fliC; flagellin
D VPBB_0754 Polar flagellin protein FlaC K02406 fliC; flagellin
D VPBB_0755 Polar flagellin protein FlaD K02406 fliC; flagellin
D VPBB_0756 Polar flagellin protein FlaE K02406 fliC; flagellin
D VPBB_2076 Polar flagellin protein FlaA K02406 fliC; flagellin
D VPBB_2077 Polar flagellin protein FlaB K02406 fliC; flagellin
D VPBB_2078 Flagellin protein FlaF K02406 fliC; flagellin
D VPBB_A1416 FliD lateral flagellar distal cap protein K02407 fliD; flagellar hook-associated protein 2
D VPBB_2074 Polar flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPBB_A1417 FliS lateral flagellar chaperone protein K02422 fliS; flagellar secretion chaperone FliS
D VPBB_2072 Polar flagellar regulatory protein FlaJ K02422 fliS; flagellar secretion chaperone FliS
D VPBB_A1421 FliA lateral flagellar RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_2050 Polar flagellar RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VPBB_0659 Polar Na+-driven flagellar motor protein MotA (PomA) K02556 motA; chemotaxis protein MotA
D VPBB_A1422 MotA lateral flagellar H+-driven motor rotation protein K02556 motA; chemotaxis protein MotA
D VPBB_0660 Polar Na+-driven flagellar motor protein MotB (PomB) K02557 motB; chemotaxis protein MotB
D VPBB_A1423 MotB lateral flagellar H+-driven motor rotation protein K02557 motB; chemotaxis protein MotB
D VPBB_2071 Polar flagellar regulatory protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPBB_2069 Polar flagellar regulatory protein FlaM K10943 flrC; two-component system, response regulator FlrC
D VPBB_A1405 LafK sigma 54-dependent lateral flagellar regulatory protein K10943 flrC; two-component system, response regulator FlrC
D VPBB_A0241 FlgM lateral flagellar anti-sigma factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPBB_0738 Negative regulator of flagellin synthesis polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPBB_2075 Polar flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D VPBB_2073 Polar flagellar protein FlaI K06604 flaI; flagellar protein FlaI
D VPBB_2052 Polar flagellar regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D VPBB_2051 Polar flagellar regulator FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D VPBB_2435 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VPBB_2434 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VPBB_2345 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPBB_2346 Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VPBB_2347 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VPBB_2348 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPBB_1610 Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VPBB_2604 Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VPBB_2605 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VPBB_2606 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VPBB_2607 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VPBB_2608 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VPBB_0631 Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VPBB_0629 Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VPBB_0627 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VPBB_A0662 Flp pilus assembly protein pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D VPBB_2249 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPBB_A0661 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPBB_2247 Flp pilus assembly protein RcpC K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0663 Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPBB_A0664 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_2246 Type II/IV secretion system secretin RcpA K02280 cpaC; pilus assembly protein CpaC
D VPBB_A0666 Type II/IV secretion system ATPase TadZ/CpaE associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPBB_2241 Type II/IV secretion system ATPase TadZ K02282 cpaE; pilus assembly protein CpaE
D VPBB_A0667 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_2240 Type II/IV secretion system ATP hydrolase TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPBB_A1375 Fimbrial-like chaperone protein K07346 fimC; fimbrial chaperone protein
D VPBB_A1374 Fimbrial-like usher protein CsuD K07347 fimD; outer membrane usher protein
D VPBB_A1373 Fimbrial-like tip adhesin CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPBB_A1376 Fimbrial-like subunit CSuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vpb04812]
D VPBB_2510 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPBB_0444 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPBB_0443 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VPBB_0828 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VPBB_0827 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VPBB_0826 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VPBB_2045 Soj-like, protein partioning protein K03496 parA; chromosome partitioning protein
D VPBB_2927 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPBB_A1599 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPBB_2926 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vpb04147]
D VPBB_0779 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPBB_2385 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPBB_A1130 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPBB_2420 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPBB_1875 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_A0770 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_0364 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPBB_2185 Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPBB_0554 Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VPBB_A0266 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_2701 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPBB_0625 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPBB_2589 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPBB_0587 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VPBB_2767 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_2626 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPBB_A0136 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPBB_0824 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1052 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_1804 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_0359 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPBB_A1026 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A0566 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_A1104 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPBB_0780 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPBB_1999 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VPBB_2614 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPBB_0323 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPBB_2227 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPBB_A1482 1 4-alpha-glucan (glycogen) branching enzyme GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VPBB_2214 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VPBB_0111 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPBB_0097 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VPBB_1271 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPBB_A0527 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPBB_1983 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_A0977 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_2413 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_1687 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPBB_2746 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPBB_2339 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPBB_A1057 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D VPBB_1570 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPBB_0251 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPBB_A0926 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vpb02048]
D VPBB_A1262 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D VPBB_A1263 CRISPR-associated protein Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D VPBB_2165 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VPBB_2162 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VPBB_2161 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VPBB_2600 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_2559 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPBB_0181 DNA-cytosine methyltransferase() K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPBB_1701 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D VPBB_1706 RelE replicon stabilization protein K06218 relE; mRNA interferase RelE/StbE
D VPBB_1700 hypothetical protein K18923 stbD; antitoxin StbD
D VPBB_1705 RelB replicon stabilization protein K18923 stbD; antitoxin StbD
D VPBB_1676 Prevent host death protein, Phd antitoxin K19159 yefM; antitoxin YefM
D VPBB_1101 Phage shock protein C K03973 pspC; phage shock protein C
D VPBB_1100 Phage shock protein B K03970 pspB; phage shock protein B
D VPBB_1660 ParE toxin protein K19092 parE1_3_4; toxin ParE1/3/4
D VPBB_1679 Death on curing protein, Doc toxin K19092 parE1_3_4; toxin ParE1/3/4
D VPBB_2892 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D VPBB_0444 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPBB_2510 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPBB_0414 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPBB_0413 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPBB_0730 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPBB_2404 YgfY K09159 cptB; antitoxin CptB
D VPBB_0568 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:vpb04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vpb04090]
C 01504 Antimicrobial resistance genes [BR:vpb01504]
D VPBB_1061 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VPBB_A0024 Chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPBB_A1596 Acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPBB_A0087 Qnr K18555 qnr; fluoroquinolone resistance protein
D VPBB_0369 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPBB_0368 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPBB_1019 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_A1090 RND efflux system membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0038 putative Co Zn Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_0898 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPBB_1020 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_0037 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPBB_A0427 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPBB_A1089 RND efflux system inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPBB_A0334 Outer membrane protein OprN K18300 oprN; outer membrane protein, multidrug efflux system
D VPBB_A0336 putative efflux protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VPBB_A0606 HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VPBB_0408 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPBB_A0317 Membrane fusion protein of RND family multidrug efflux pump K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPBB_A0426 putative efflux system membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vpb00537]
D VPBB_1983 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPBB_A0977 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vpb03100]
D VPBB_t10 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_At03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t98 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t107 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t76 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPBB_t51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t56 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t60 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t54 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t58 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t55 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t52 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t57 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPBB_t47 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t68 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t65 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t71 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t73 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPBB_t105 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t74 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t109 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t80 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_t96 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPBB_At08 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_At10 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_At13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_t46 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPBB_t26 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t30 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t18 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_t22 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPBB_At01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t112 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t11 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t81 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_t01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPBB_At12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t94 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t86 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t85 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t87 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t92 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t88 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t90 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t45 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t83 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_At14 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t102 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPBB_t05 tRNA-His K14226 tRNA-His; tRNA His
D VPBB_t07 tRNA-His K14226 tRNA-His; tRNA His
D VPBB_t108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPBB_t77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPBB_t78 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At06 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_t15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPBB_At02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t99 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t111 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPBB_t49 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t91 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t89 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t82 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t84 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t93 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t09 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t29 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t20 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t32 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPBB_t64 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t67 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t69 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t62 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPBB_t06 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t33 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t08 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPBB_t40 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t59 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t61 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t48 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_At07 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_At05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPBB_t63 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t66 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t70 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t72 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t104 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t75 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t101 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPBB_t13 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t79 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t95 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPBB_t36 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t38 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t37 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t39 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t103 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPBB_t42 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_At04 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t97 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t03 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t110 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_t41 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPBB_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r31 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r25 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r28 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_Ar01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPBB_r09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r30 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r24 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_r27 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_Ar02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPBB_Ar03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r26 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r29 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r23 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPBB_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VPBB_A0512 PQQ-dependent oxidoreductase gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D VPBB_0214 Oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D VPBB_A0701 Aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D VPBB_2807 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D VPBB_1971 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VPBB_A1289 Putative oxidoreductase YncB K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D VPBB_A1055 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VPBB_A0592 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VPBB_2364 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VPBB_1363 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D VPBB_A1546 Alkyl hydroperoxide reductase protein F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D VPBB_1852 Cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D VPBB_A0281 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPBB_0317 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPBB_A0189 Peptide methionine sulfoxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D VPBB_1976 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VPBB_A1178 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VPBB_1922 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VPBB_1577 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPBB_A1006 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPBB_2091 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VPBB_A1545 Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D VPBB_A1543 Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VPBB_2079 putative dye-decolorizing peroxidase (DyP), YfeX-like subgroup K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VPBB_A0035 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VPBB_A1170 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VPBB_2660 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VPBB_0072 Ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2]
D VPBB_A1450 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D VPBB_2095 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VPBB_A0861 Ribonucleotide reductase of class III (anaerobic) activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VPBB_A1432 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPBB_0944 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPBB_1299 radical activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPBB_1115 NADH oxidoreductase hcr K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D VPBB_2379 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VPBB_1051 S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VPBB_A0396 Radical SAM family protein HutW similar to coproporphyrinogen III oxidase oxygen-independent associated with heme uptake K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D VPBB_1616 Galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D VPBB_A1036 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPBB_A0191 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPBB_A0065 putative N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D VPBB_0700 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VPBB_2270 Acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VPBB_1685 Histone acetyltransferase HPA2-related acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D VPBB_2468 Histone acetyltransferase HPA2 K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VPBB_A1435 putative acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D VPBB_1291 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D VPBB_0969 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VPBB_0968 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VPBB_1401 Putative cytoplasmic protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VPBB_0882 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VPBB_0499 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VPBB_2175 Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VPBB_A0344 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VPBB_0406 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VPBB_0867 Selenoprotein O and cysteine-containing protein-like protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VPBB_1544 hypothetical protein K26088 vopS; protein adenylyltransferase VopS [EC:2.7.7.108]
D VPBB_A0094 Macro domain possibly ADP-ribose binding module K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D VPBB_0847 4-hydroxybenzoyl-CoA thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPBB_1003 4-hydroxybenzoyl-CoA thioesterase family active site protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPBB_A1451 Heat shock protein 60 family chaperone GroEL K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPBB_1795 putative metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VPBB_2023 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VPBB_A0542 EAL family protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPBB_1296 HD-GYP family protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D VPBB_2429 extracellular deoxyribonuclease precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VPBB_1881 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPBB_0096 Putative deoxyribonuclease similar to YcfH, type 2 K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPBB_2264 Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPBB_0794 Esterase ybfF K01175 ybfF; esterase [EC:3.1.-.-]
D VPBB_0644 hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VPBB_A0778 Chitodextrinase precursor K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VPBB_A0093 Putative isomerase K03931 ygjK; glucosidase [EC:3.2.1.-]
D VPBB_A0726 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VPBB_2875 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VPBB_2458 Deacetylase DA1 K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D VPBB_2504 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VPBB_A1287 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VPBB_2476 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VPBB_1993 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VPBB_0403 Adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VPBB_0240 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D VPBB_1894 Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VPBB_A1324 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPBB_A0632 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPBB_A0918 Putative regulator protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPBB_A1433 Transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D VPBB_A1060 YjeF protein function unknown K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VPBB_A0216 4-aminobutyrate aminotransferase K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D VPBB_2194 Cysteine desulfurase CsdA-CsdE, main protein CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VPBB_0324 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VPBB_1942 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VPBB_1941 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VPBB_1940 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VPBB_2181 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VPBB_2180 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VPBB_2179 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VPBB_2178 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VPBB_2177 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VPBB_2176 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VPBB_1444 Type cbb3 cytochrome oxidase biogenesis protein CcoI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VPBB_0915 Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D VPBB_2325 Sugar maltose fermentation stimulation protein-like protein K06206 sfsA; sugar fermentation stimulation protein A
D VPBB_A0621 Periplasmic protein torT precursor K11930 torT; periplasmic protein TorT
D VPBB_0558 Putative acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D VPBB_A0874 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D VPBB_1412 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D VPBB_0912 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin
D VPBB_1777 Ferredoxin K11107 yfaE; ferredoxin
D VPBB_1943 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VPBB_1944 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VPBB_1939 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VPBB_0001 Flavoprotein MioC K06205 mioC; MioC protein
D VPBB_0485 Flavodoxin 2 K03840 fldB; flavodoxin II
D VPBB_0569 Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D VPBB_A1393 Soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D VPBB_A1098 Periplasmic nitrate reductase component NapD K02570 napD; periplasmic nitrate reductase NapD
D VPBB_A1097 Ferredoxin-type protein NapF (periplasmic nitrate reductase) K02572 napF; ferredoxin-type protein NapF
D VPBB_1086 Periplasmic nitrate reductase component NapE K02571 napE; periplasmic nitrate reductase NapE
D VPBB_1764 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D VPBB_0792 Flavodoxin 1 K03839 fldA; flavodoxin I
D VPBB_A1357 Ferredoxin-type protein NapG (periplasmic nitrate reductase) K02573 napG; ferredoxin-type protein NapG
D VPBB_A1056 Electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D VPBB_1769 Cytochrome c-type protein NrfB precursor K04013 nrfB; cytochrome c-type protein NrfB
D VPBB_1768 NrfC protein K04014 nrfC; protein NrfC
D VPBB_1767 NrfD protein K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VPBB_0761 Sulfate transporter, CysZ-type K06203 cysZ; CysZ protein
D VPBB_A1390 Hypothetical protein YaeR with similarity to glyoxylase family K08234 yaeR; glyoxylase I family protein
D VPBB_A0095 Lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein
D VPBB_A1589 Gamma-D-Glutamyl-meso-Diaminopimelate Amidase K14054 mpaA; murein peptide amidase A
D VPBB_2436 Hypothetical protein YggS, proline synthase co-transcribed bacterial-like protein PROSC K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VPBB_1864 membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D VPBB_1863 Heat shock (predicted periplasmic) protein YciM, precursor K19804 lapB; lipopolysaccharide assembly protein B
D VPBB_0210 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D VPBB_0220 glycosyl transferase, family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D VPBB_A0457 Pantothenate kinase K02173 yggC; putative kinase
D VPBB_2828 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) K02498 hemY; HemY protein
D VPBB_0092 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D VPBB_0091 YigP K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VPBB_0036 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VPBB_2271 Putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VPBB_2144 Multidrug efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
D VPBB_0632 Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D VPBB_2015 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D VPBB_2848 putative transmembrane protein K15977 K15977; putative oxidoreductase
D VPBB_A0036 hypothetical protein K15977 K15977; putative oxidoreductase
D VPBB_A0829 Protein acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VPBB_A0499 Cold shock protein CspE K03704 cspA; cold shock protein
D VPBB_A1171 Cold shock protein CspA K03704 cspA; cold shock protein
D VPBB_0963 Cold shock protein CspD K03704 cspA; cold shock protein
D VPBB_2758 Regulator of sigma D K07740 rsd; regulator of sigma D
D VPBB_2319 Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VPBB_0140 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D VPBB_1129 Heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D VPBB_0874 Cell division trigger factor K03545 tig; trigger factor
D VPBB_0615 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D VPBB_2891 MG(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D VPBB_2906 MG(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D VPBB_1336 SM-20-related protein K07394 K07394; SM-20-related protein
D VPBB_1951 Thioredoxin K07396 K07396; putative protein-disulfide isomerase
D VPBB_A0056 Thioredoxin-like protein K07396 K07396; putative protein-disulfide isomerase
D VPBB_A0190 hypothetical protein K07397 yhfA; putative redox protein
D VPBB_0136 NfuA Fe-S protein maturation K07400 nfuA; Fe/S biogenesis protein NfuA
D VPBB_0775 Selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D VPBB_A1009 Putative membrane-bound ClpP-class protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D VPBB_0908 methylated-DNA--protein-cysteine methyltransferase-related protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VPBB_0180 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VPBB_0191 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VPBB_0089 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D VPBB_A0798 putative ATP-dependent endonuclease of the OLD family K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VPBB_A1122 hypothetical protein K07461 K07461; putative endonuclease
D VPBB_2873 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D VPBB_1036 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
D VPBB_2871 DNA topoisomerase I-like protein K07479 yrdD; putative DNA topoisomerase
D VPBB_1689 Mobile element protein K07483 K07483; transposase
D VPBB_A1268 putative transposase K07497 K07497; putative transposase
D VPBB_1688 transposase OrfAB, subunit B K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VPBB_1099 Phage shock protein A K03969 pspA; phage shock protein A
D VPBB_A0264 Phage shock protein E K03972 pspE; phage shock protein E
D VPBB_A1436 Prophage Lp2 protein 6 K07504 K07504; predicted type IV restriction endonuclease
D VPBB_1997 hypothetical protein co-occurring with RecR K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VPBB_0899 RND multidrug efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D VPBB_1582 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPBB_1746 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPBB_1367 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPBB_0782 Di-tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VPBB_0401 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VPBB_2225 putative sodium-dependent galactose transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPBB_A0080 sodium-solute symporter putative K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPBB_A0077 putative transporter protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPBB_1878 Sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPBB_1111 Putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPBB_2152 Sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPBB_1600 Sodium glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPBB_0480 Sodium alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPBB_0593 Sodium alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPBB_0484 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VPBB_A0173 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VPBB_2263 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPBB_A0180 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPBB_0832 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPBB_A0702 putative translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D VPBB_1156 TrkA, Potassium channel-family protein K07085 K07085; putative transport protein
C 99978 Cell growth
D VPBB_1809 Intracellular septation protein IspA K06190 ispZ; intracellular septation protein
D VPBB_0233 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D VPBB_2882 putative Transcriptional Regulator K06377 spo0M; sporulation-control protein
D VPBB_1202 putative SpoOM-related protein K06377 spo0M; sporulation-control protein
D VPBB_1384 Anti anti-sigma regulatory factor SypA K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D VPBB_0939 Stage V sporulation protein involved in spore cortex synthesis (SpoVR) K06415 spoVR; stage V sporulation protein R
D VPBB_2685 NlpD-related protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VPBB_0922 Lipoprotein YcfM, part of a salvage pathway of unknown substrate K07337 K07337; penicillin-binding protein activator
D VPBB_0979 Positive regulator of competence TfoX K07343 tfoX; DNA transformation protein and related proteins
D VPBB_1165 Regulator of competence-specific genes K07343 tfoX; DNA transformation protein and related proteins
D VPBB_0673 Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D VPBB_1467 ProQ: influences osmotic activation of compatible solute ProP K03607 proQ; ProP effector
D VPBB_A0836 Universal stress protein family 2 K06149 uspA; universal stress protein A
D VPBB_0071 Universal stress protein A K06149 uspA; universal stress protein A
D VPBB_1440 Universal stress protein E K14055 uspE; universal stress protein E
D VPBB_0329 Universal stress protein family 3 K14061 uspF; universal stress protein F
D VPBB_0112 GTP-binding protein TypA K06207 typA; GTP-binding protein
D VPBB_2187 hypothetical protein K07167 chrR; putative transcriptional regulator
D VPBB_0703 Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VPBB_2502 putative ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
D VPBB_0941 Serine protein kinase (prkA protein), P-loop containing K07180 prkA; serine protein kinase
D VPBB_1584 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPBB_2725 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPBB_1743 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPBB_A0068 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPBB_2224 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPBB_0400 Arylsulfatase K07184 ygiM; SH3 domain protein
D VPBB_1477 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D VPBB_1035 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D VPBB_0710 Outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB
D VPBB_2032 Lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VPBB_0970 putative outer membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D VPBB_1118 putative outer membrane lipoprotein Pcp K06077 slyB; outer membrane lipoprotein SlyB
D VPBB_2125 Outer membrane chaperone Skp (OmpH) precursor K06142 hlpA; outer membrane protein
D VPBB_2378 Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D VPBB_2277 Lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D VPBB_A0088 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D VPBB_2594 membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D VPBB_0822 Starvation lipoprotein Slp-like protein K07285 slp; outer membrane lipoprotein
D VPBB_2184 putative lipoprotein YajG precursor K07286 yajG; uncharacterized lipoprotein
D VPBB_1900 AsmA protein K07289 asmA; AsmA protein
D VPBB_1574 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG K01993 ABC-2.TX; HlyD family secretion protein
D VPBB_A0445 putative membrane fusion protein (MFP) component of efflux pump membrane anchor protein YbhG K01993 ABC-2.TX; HlyD family secretion protein
D VPBB_1836 Membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D VPBB_2037 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VPBB_2034 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VPBB_0578 putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
D VPBB_1398 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D VPBB_0551 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VPBB_A0810 Periplasmic divalent cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D VPBB_0553 Cytoplasmic copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
D VPBB_0344 ApaG protein K06195 apaG; ApaG protein
D VPBB_2823 Frataxin-like protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VPBB_A0397 Putative heme iron utilization protein K07227 chuX; heme iron utilization protein
D VPBB_1761 Iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
D VPBB_2218 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VPBB_2005 Bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D VPBB_1437 Putative Bax protein K03796 bax; Bax protein
D VPBB_1854 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D VPBB_A1161 Oxidoreductase family protein K03810 mviM; virulence factor
D VPBB_0300 ElaA protein K02348 elaA; ElaA protein
D VPBB_0076 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D VPBB_A0458 putative histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase
D VPBB_A1394 putative histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase
D VPBB_0475 Pyruvate formate-lyase K06866 grcA; autonomous glycyl radical cofactor
D VPBB_2221 tRNA-binding protein YgjH K06878 K06878; tRNA-binding protein
D VPBB_2322 hypothetical protein K07001 K07001; NTE family protein
D VPBB_A0114 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VPBB_1694 L-2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D VPBB_A0653 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VPBB_2299 putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D VPBB_A0731 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D VPBB_0115 Inner membrane protein YihY, formerly thought to be RNase BN K07058 K07058; membrane protein
D VPBB_2712 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D VPBB_2196 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE K02426 sufE; cysteine desulfuration protein SufE
D VPBB_A1460 Rhodanese domain protein UPF0176 K07146 K07146; UPF0176 protein
D VPBB_1056 a protein of unknown function perhaps involved in purine metabolism K07153 hflD; high frequency lysogenization protein
D VPBB_A0649 LemA protein K03744 lemA; LemA protein
D VPBB_2636 hypothetical protein K03745 slyX; SlyX protein
D VPBB_2872 Protein of unknown function Smg K03747 smg; Smg protein
D VPBB_A0782 Conserved uncharacterized protein CreA K05805 creA; CreA protein
D VPBB_2428 Protein sprT K02742 sprT; SprT protein
D VPBB_2006 DedD protein K03749 dedD; DedD protein
D VPBB_2601 DamX, an inner membrane protein involved in bile resistance K03112 damX; DamX protein
D VPBB_1181 SanA protein K03748 sanA; SanA protein
D VPBB_1853 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VPBB_1470 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VPBB_A1488 membrane protein K08974 K08974; putative membrane protein
D VPBB_A0811 putative membrane protein K08984 yjdF; putative membrane protein
D VPBB_2814 putative membrane protein K08985 K08985; putative lipoprotein
D VPBB_1012 Membrane protein with DUF350 domain K08989 K08989; putative membrane protein
D VPBB_1722 Membrane protein YcjF K08990 ycjF; putative membrane protein
D VPBB_2796 hypothetical protein K08993 yhhL; putative membrane protein
D VPBB_1072 UPF0225 protein YchJ K09858 K09858; SEC-C motif domain protein
D VPBB_0907 Lipoprotein-related protein K09914 K09914; putative lipoprotein
D VPBB_A1506 Maltose operon periplasmic protein MalM K05775 malM; maltose operon periplasmic protein
D VPBB_0165 hypothetical protein K13256 psiE; protein PsiE
D VPBB_A0802 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D VPBB_A0286 AnkB protein K06867 K06867; uncharacterized protein
D VPBB_A0643 Putative arylsulfatase regulatory protein K06871 K06871; uncharacterized protein
D VPBB_A0549 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D VPBB_A0631 Putative arylsulfatase regulatory protein K06871 K06871; uncharacterized protein
D VPBB_1537 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D VPBB_1538 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D VPBB_1723 Conserved protein YcjX with nucleoside triphosphate hydrolase domain K06918 K06918; uncharacterized protein
D VPBB_A0959 putative DNA-binding protein K06934 K06934; uncharacterized protein
D VPBB_1990 proteinase inhibitor, putative K06940 K06940; uncharacterized protein
D VPBB_A1144 metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D VPBB_1049 Amine oxidase, flavin-containing K06954 K06954; uncharacterized protein
D VPBB_1226 L-cystine uptake protein TcyP K06956 K06956; uncharacterized protein
D VPBB_A1360 putative acetyltransferase K06975 K06975; uncharacterized protein
D VPBB_0639 putative deacylase K06987 K06987; uncharacterized protein
D VPBB_A0923 putative deacylase K06987 K06987; uncharacterized protein
D VPBB_A0284 Glyoxalase family protein K06996 K06996; uncharacterized protein
D VPBB_0924 YcfP protein: probably an esterase that is part of a salvage cluster K07000 K07000; uncharacterized protein
D VPBB_0412 Putative esterase K07000 K07000; uncharacterized protein
D VPBB_1211 putative exporter of the RND superfamily K07003 K07003; uncharacterized protein
D VPBB_2653 Extracellular deoxyribonuclease Xds K07004 K07004; uncharacterized protein
D VPBB_A1137 Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein
D VPBB_1965 hydrolase of alkaline phosphatase superfamily K07014 K07014; uncharacterized protein
D VPBB_2205 putative hydrolase K07014 K07014; uncharacterized protein
D VPBB_2644 hypothetical protein K07019 K07019; uncharacterized protein
D VPBB_0664 putative hydrolase of the alpha K07020 K07020; uncharacterized protein
D VPBB_0591 hypothetical protein K07034 K07034; uncharacterized protein
D VPBB_1015 hypothetical protein K07039 K07039; uncharacterized protein
D VPBB_1910 Protein export cytoplasm protein SecA ATPase RNA helicase K07039 K07039; uncharacterized protein
D VPBB_2639 Putative cytoplasmic protein, probably associated with Glutathione-regulated potassium-efflux K07070 K07070; uncharacterized protein
D VPBB_0769 Cell division inhibitor K07071 K07071; uncharacterized protein
D VPBB_1515 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D VPBB_0332 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D VPBB_A0174 TRAP transporter solute receptor TAXI family precursor K07080 K07080; uncharacterized protein
D VPBB_1514 putative permease K07090 K07090; uncharacterized protein
D VPBB_A0689 hypothetical protein K07090 K07090; uncharacterized protein
D VPBB_0776 putative permease K07090 K07090; uncharacterized protein
D VPBB_0957 hypothetical protein K07090 K07090; uncharacterized protein
D VPBB_0454 Putative membrane protein YfcA K07090 K07090; uncharacterized protein
D VPBB_0498 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D VPBB_A0168 Putative phosphatase K07093 K07093; uncharacterized protein
D VPBB_0774 Phosphodiesterase yfcE K07095 K07095; uncharacterized protein
D VPBB_A0202 Protein ytfJ precursor K07109 K07109; uncharacterized protein
D VPBB_0315 Protein ytfJ precursor K07109 K07109; uncharacterized protein
D VPBB_A0867 putative transporter component K07112 K07112; uncharacterized protein
D VPBB_A0868 putative transmembrane protein K07112 K07112; uncharacterized protein
D VPBB_0430 LppC putative lipoprotein K07121 K07121; uncharacterized protein
D VPBB_1190 hypothetical protein K07126 K07126; uncharacterized protein
D VPBB_A0692 glutathione S-transfersae-related protein K07136 K07136; uncharacterized protein
D VPBB_0913 NAD(FAD)-utilizing dehydrogenase, sll0175-like protein K07137 K07137; uncharacterized protein
D VPBB_0464 putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D VPBB_A0380 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K07140 K07140; MOSC domain-containing protein
D VPBB_2190 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein
D VPBB_0389 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D VPBB_2439 UPF0235 protein K09131 K09131; uncharacterized protein
D VPBB_0689 putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D VPBB_1988 YcgN K09160 K09160; uncharacterized protein
D VPBB_0942 hypothetical protein K09161 K09161; uncharacterized protein
D VPBB_1050 Hypothetical protein K09701 K09701; uncharacterized protein
D VPBB_A0237 Hemolysin K09712 K09712; uncharacterized protein
D VPBB_A1597 putative polymerase-like protein K09749 K09749; uncharacterized protein
D VPBB_2143 hypothetical protein K09768 K09768; uncharacterized protein
D VPBB_0211 acid phosphatase K09775 K09775; uncharacterized protein
D VPBB_1811 YciL protein K09780 K09780; uncharacterized protein
D VPBB_A0377 hypothetical protein K09781 K09781; uncharacterized protein
D VPBB_0940 UPF0229 protein YeaH K09786 K09786; uncharacterized protein
D VPBB_2000 Hypothetical protein DUF454 K09790 K09790; uncharacterized protein
D VPBB_0937 Protein YcaR in KDO2-Lipid A biosynthesis cluster K09791 K09791; uncharacterized protein
D VPBB_1442 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D VPBB_A0373 hypothetical protein K09794 K09794; uncharacterized protein
D VPBB_0381 putative periplasmic protein K09797 K09797; uncharacterized protein
D VPBB_0617 UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D VPBB_A1126 UPF0265 protein YeeX K09802 K09802; uncharacterized protein
D VPBB_2414 Protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D VPBB_A0224 putative virK protein K09824 virK; uncharacterized protein
D VPBB_A0302 putative exported protein K05952 K05952; uncharacterized protein
D VPBB_2174 putative exported or periplasmic protein in ApbE locus K05952 K05952; uncharacterized protein
D VPBB_1473 hypothetical protein K00243 K00243; uncharacterized protein
D VPBB_1855 putative lipoprotein K09857 K09857; uncharacterized protein
D VPBB_0920 hypothetical protein K09859 K09859; uncharacterized protein
D VPBB_0481 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D VPBB_2351 zinc-binding protein K09862 K09862; uncharacterized protein
D VPBB_2751 hypothetical protein K09891 K09891; uncharacterized protein
D VPBB_0103 Protein of unknown function DUF414 K09894 K09894; uncharacterized protein
D VPBB_2409 Putative conserved exported protein precursor K09895 K09895; uncharacterized protein
D VPBB_2885 Protein yihD K09896 K09896; uncharacterized protein
D VPBB_A0033 hypothetical protein K09897 K09897; uncharacterized protein
D VPBB_2645 hypothetical protein K09898 K09898; uncharacterized protein
D VPBB_1917 hypothetical protein K09899 K09899; uncharacterized protein
D VPBB_1791 hypothetical protein K09901 K09901; uncharacterized protein
D VPBB_0829 Protein YcgL K09902 K09902; uncharacterized protein
D VPBB_1964 hypothetical protein K09904 K09904; uncharacterized protein
D VPBB_0817 Protein yecM K09907 K09907; uncharacterized protein
D VPBB_0418 hypothetical protein K09908 K09908; uncharacterized protein
D VPBB_0960 hypothetical protein K09909 K09909; uncharacterized protein
D VPBB_A1448 Acetylornithine deacetylase K09909 K09909; uncharacterized protein
D VPBB_2320 hypothetical protein K09910 K09910; uncharacterized protein
D VPBB_A0350 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D VPBB_A1123 Protein of unknown function YceH K09915 K09915; uncharacterized protein
D VPBB_1974 Uncharacterized protein YeaC K09916 K09916; uncharacterized protein
D VPBB_A0837 hypothetical protein K09917 K09917; uncharacterized protein
D VPBB_2208 YebG, DNA damage-inducible gene in SOS regulon, expressed in stationary phase K09918 K09918; uncharacterized protein
D VPBB_0410 hypothetical protein K09920 K09920; uncharacterized protein
D VPBB_2819 Protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D VPBB_A0167 hypothetical protein K09923 K09923; uncharacterized protein
D VPBB_1445 hypothetical protein K09926 K09926; uncharacterized protein
D VPBB_0933 hypothetical protein K09928 K09928; uncharacterized protein
D VPBB_2846 hypothetical protein K09930 K09930; uncharacterized protein
D VPBB_2663 Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D VPBB_2098 hypothetical protein K09938 K09938; uncharacterized protein
D VPBB_A0146 putative membrane protein K09939 K09939; uncharacterized protein
D VPBB_1238 hypothetical protein K09941 K09941; uncharacterized protein
D VPBB_1758 putative exported protein K09947 K09947; uncharacterized protein
D VPBB_0902 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D VPBB_0310 hypothetical protein K09950 K09950; uncharacterized protein
D VPBB_A0531 hypothetical protein K09954 K09954; uncharacterized protein
D VPBB_A0610 Hypothetical protein colocalized with Enterobactin receptor VctA K09956 K09956; uncharacterized protein
D VPBB_0722 hypothetical protein K09973 K09973; uncharacterized protein
D VPBB_0797 hypothetical protein K09977 K09977; uncharacterized protein
D VPBB_0402 Phosphate transport regulator K07220 K07220; uncharacterized protein
D VPBB_1759 Iron-regulated protein A precursor K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024