+E Transcription factors KO
#
Transcription Factors - Variovorax paradoxus B4
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D VAPA_1c40040 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D VAPA_2c03720 transcriptional regulator, AraC family K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D VAPA_2c08960 transcriptional regulator, AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D VAPA_1c25190 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D VAPA_2c10520 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D VAPA_2c10660 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D VAPA_1c38510 putative bifunctional transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
D VAPA_1c09800 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c26410 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c26530 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c33590 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c02790 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c10480 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c05250 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c14070 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_2c02500 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_2c11720 putative transcriptional regulator PalR, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c51390 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c54120 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VAPA_1c36900 transcriptional regulator, LysR family K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D VAPA_1c33580 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VAPA_1c52570 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VAPA_1c45440 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VAPA_2c02440 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D VAPA_2c11830 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D VAPA_1c28330 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VAPA_1c00600 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D VAPA_1c32050 transcriptional regulator, LysR family K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D VAPA_1c22440 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D VAPA_1c03070 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D VAPA_1c47720 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D VAPA_1c37610 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D VAPA_1c10820 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D VAPA_1c18710 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D VAPA_1c07680 transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D VAPA_2c01440 transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D VAPA_1c40090 transcriptional regulator, LysR family K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D VAPA_2c02970 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VAPA_1c33310 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VAPA_2c09360 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VAPA_2c09380 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VAPA_1c29930 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VAPA_2c10330 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VAPA_2c07370 nac; putative nitrogen assimilation regulatory protein Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VAPA_2c11260 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VAPA_2c00190 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VAPA_2c10850 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VAPA_2c00760 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D VAPA_1c37910 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D VAPA_2c02210 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D VAPA_1c08860 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D VAPA_1c16740 transcriptional regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D VAPA_1c30990 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D VAPA_1c46550 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D VAPA_1c46500 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D VAPA_2c06870 putative deoxyribose operon repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D VAPA_1c34930 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D VAPA_1c01410 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VAPA_1c20820 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VAPA_1c21910 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VAPA_1c47830 putative ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VAPA_1c35190 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D VAPA_1c22010 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D VAPA_2c11530 phnF; phosphonate metabolism transcriptional regulator PhnF, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D VAPA_1c01900 hutC; histidine utilization repressor HutG K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VAPA_1c15240 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_1c08520 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_1c04540 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_2c05210 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_2c09600 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_1c39300 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_2c02980 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D VAPA_1c16750 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_1c18150 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_2c02910 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_1c53390 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_2c06690 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_2c06740 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VAPA_1c26810 transcriptional regulator, GntR family K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D VAPA_2c01410 transcriptional regulator, GntR family K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D VAPA_1c54170 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VAPA_1c39600 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VAPA_1c39770 putative aminotransferase domain containing transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VAPA_2c02460 putative aminotransferase domain-containing transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VAPA_1c04260 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D VAPA_1c01750 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D VAPA_1c18330 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
C TetR/AcrR family
D VAPA_1c50000 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D VAPA_1c08390 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VAPA_1c49030 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D VAPA_1c53300 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D VAPA_1c50140 rutR; putative pyrimidine utilization regulatory protein RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D VAPA_1c38450 putative transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D VAPA_1c35630 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VAPA_2c09980 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VAPA_2c12420 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VAPA_1c47020 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D VAPA_1c02120 transcriptional regulator, TetR family K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
D VAPA_1c30680 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
C Lrp/AsnC family
D VAPA_1c23040 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c04900 asnC; transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c21750 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c36870 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c41140 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c49210 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c49780 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c10590 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_2c00080 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c53130 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VAPA_1c53410 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D VAPA_1c20270 MalT-like transcriptional regulator, LuxR family K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D VAPA_1c09280 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VAPA_2c01930 transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D VAPA_1c21810 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VAPA_1c51560 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D VAPA_1c25600 putative transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VAPA_1c00290 putative Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VAPA_1c46070 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
C Fur family
D VAPA_1c04840 putative ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VAPA_1c37460 putative ferric uptake regulation protein, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VAPA_1c37580 putative ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
D VAPA_1c01220 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D VAPA_1c39380 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D VAPA_1c39470 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D VAPA_1c46120 putative beta-ketoadipate pathway transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VAPA_2c06800 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VAPA_1c25230 putative beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VAPA_1c34320 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VAPA_2c09640 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VAPA_1c39410 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D VAPA_1c22930 transcriptional regulator, IclR family K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D VAPA_1c33130 transcriptional regulator, IclR family K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
C CRP/FNR family
D VAPA_2c05040 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c43600 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c32020 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c48090 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c13510 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c29220 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c00820 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c22160 transcriptional regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c55080 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c51940 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_1c45890 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VAPA_2c03470 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VAPA_1c10540 putative cyclic nucleotide-binding domain-containing Crp-type transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D VAPA_1c23110 iscR; transcriptional regulator, IscR family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VAPA_2c04410 transcriptional regulator, Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D VAPA_1c19870 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VAPA_1c20920 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D VAPA_1c00940 transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D VAPA_1c33550 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
C PadR family
D VAPA_1c20070 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
C Other families
D VAPA_1c54080 putative biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VAPA_1c47740 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VAPA_1c21770 propionate catabolism activator, Fis family K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D VAPA_2c12280 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VAPA_1c10740 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VAPA_1c25980 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VAPA_2c12840 putative transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VAPA_2c13020 putative transcription regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D VAPA_1c07080 sigma54-specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_2c01980 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_2c08560 putative GAF-modulated sigma54-specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_1c00840 acoR; putative acetoin catabolism regulatory protein AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_1c31410 sigma54-specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_1c06980 transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_1c16870 putative transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_1c52100 transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VAPA_2c07610 norR; nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VAPA_1c22260 transcritpional regulator, NifA subfamily K02584 nifA; Nif-specific regulatory protein
D VAPA_1c42230 putative molybdate transport repressor ModE K02019 modE; molybdate transport system regulatory protein
B Ribbon-helix-helix
C CopG family
C Other families
D VAPA_1c49770 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D VAPA_2c08580 putative nitrous oxide reductase expression regulator NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D VAPA_1c26150 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VAPA_1c00490 ParB-like partion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VAPA_2c00020 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VAPA_2c11310 putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VAPA_1c45040 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D VAPA_1c41550 putative transcriptional regulator, DeoR family K11531 lsrR; lsr operon transcriptional repressor
D VAPA_2c12660 greA; putative transcription elongation factor GreA K06140 rnk; regulator of nucleoside diphosphate kinase
D VAPA_1c47560 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D VAPA_1c32790 putative phage transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein
D VAPA_1c27590 putative FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D VAPA_2c12470 putative FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D VAPA_1c47580 hypothetical protein K07735 algH; putative transcriptional regulator
D VAPA_1c09590 dksA; putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VAPA_2c03360 putative transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D VAPA_1c31690 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D VAPA_1c45950 rtcR; transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D VAPA_1c09630 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0