+D GENES KO
#
KEGG Orthology (KO) - Vibrio parahaemolyticus UCM-V493
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vph00010]
D VPUCM_2834 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0269 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPUCM_2681 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0787 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0264 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPUCM_20446 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2245 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2682 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPUCM_2926 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPUCM_0377 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_2112 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_20726 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_20356 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPUCM_2605 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPUCM_2604 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_20140 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPUCM_1783 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_0843 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_2246 Aldose 1-epimerase family protein YeaD K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VPUCM_0124 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPUCM_21510 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_2718 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_20175 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21488 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2117 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vph00020]
D VPUCM_2382 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VPUCM_2585 Aconitate hydratase 2 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPUCM_2197 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPUCM_2377 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VPUCM_2376 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_2374 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPUCM_2375 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPUCM_2379 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2378 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2381 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPUCM_2380 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_1335 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPUCM_2971 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPUCM_21136 Putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_0124 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPUCM_2605 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPUCM_2604 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vph00030]
D VPUCM_2834 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPUCM_1790 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPUCM_1789 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VPUCM_1788 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VPUCM_2844 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPUCM_2687 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPUCM_20496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPUCM_20497 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VPUCM_2674 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VPUCM_0807 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VPUCM_20594 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VPUCM_0809 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_2484 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VPUCM_0059 Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VPUCM_0062 4-hydroxy-2-oxoglutarate aldolase 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPUCM_20077 4-hydroxy-2-oxoglutarate aldolase 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPUCM_0060 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D VPUCM_20076 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VPUCM_2681 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0787 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0269 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vph00040]
D VPUCM_20080 Exopolygalacturonate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D VPUCM_20082 Oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D VPUCM_20073 Pectin degradation protein KdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D VPUCM_20071 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D VPUCM_0262 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPUCM_2814 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0263 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_2844 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPUCM_1894 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:vph00051]
D VPUCM_21259 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_20852 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_21107 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0269 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPUCM_0389 Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VPUCM_21137 Putative oxidoreductase linked to yggC K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D VPUCM_20715 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VPUCM_2681 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0787 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0264 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPUCM_20287 Phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPUCM_21255 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPUCM_20714 PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPUCM_21139 PTS system, IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPUCM_21138 PTS system, mannitol-specific IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPUCM_0390 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vph00052]
D VPUCM_0843 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VPUCM_0842 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPUCM_0841 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPUCM_20785 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_0840 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_2814 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0263 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_0838 Evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VPUCM_0837 Evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D VPUCM_2052 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_1139 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:vph00053]
D VPUCM_0262 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPUCM_2096 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPUCM_20224 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPUCM_20223 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPUCM_20222 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPUCM_1894 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:vph00500]
D VPUCM_1139 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VPUCM_2814 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0263 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_2418 Cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VPUCM_2719 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2721 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2720 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPUCM_21510 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_2718 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_20175 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPUCM_2185 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPUCM_20735 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPUCM_2184 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPUCM_21440 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VPUCM_21442 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VPUCM_21460 putative pullulanase precursor K01200 pulA; pullulanase [EC:3.2.1.41]
D VPUCM_21438 Periplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPUCM_20884 Cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPUCM_0018 Periplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPUCM_21178 Glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPUCM_21441 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21466 Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D VPUCM_2512 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPUCM_2511 Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_2834 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vph00520]
D VPUCM_0900 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VPUCM_20049 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VPUCM_0533 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VPUCM_2469 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_2576 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_2577 Chitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_2393 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPUCM_1537 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VPUCM_2394 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VPUCM_20032 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VPUCM_2575 Glucosamine kinase GpsK K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D VPUCM_0379 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPUCM_0676 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VPUCM_3149 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VPUCM_21548 PTS system, N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPUCM_0531 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VPUCM_21547 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VPUCM_0532 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VPUCM_2758 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPUCM_3017 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPUCM_0206 N-Acetylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D VPUCM_21488 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2117 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_2814 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0263 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0262 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPUCM_0842 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPUCM_0841 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPUCM_20785 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_0840 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_2096 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPUCM_2834 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPUCM_21259 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_20852 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_21107 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPUCM_2185 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VPUCM_20735 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vph00620]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_2605 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPUCM_2604 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_1106 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_1134 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_21032 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_1133 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPUCM_0377 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_2112 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_20726 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_0935 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VPUCM_2978 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPUCM_2979 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPUCM_2278 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_20697 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_1703 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VPUCM_1783 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VPUCM_21329 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VPUCM_20140 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPUCM_20137 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VPUCM_20890 D-Lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D VPUCM_20289 putative glyoxylase family protein (Lactoylglutathione lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPUCM_2253 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPUCM_20675 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPUCM_2214 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPUCM_0942 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VPUCM_1304 putative metal-binding enzyme, YcbL K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VPUCM_1960 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VPUCM_2869 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VPUCM_2630 Oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VPUCM_2629 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPUCM_2631 Oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_1335 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPUCM_2971 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPUCM_21136 Putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_2863 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPUCM_0124 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPUCM_20356 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPUCM_0569 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VPUCM_20194 Malate synthase-related protein K01638 aceB; malate synthase [EC:2.3.3.9]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_0367 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VPUCM_21195 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vph00630]
D VPUCM_0570 Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_0569 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VPUCM_20194 Malate synthase-related protein K01638 aceB; malate synthase [EC:2.3.3.9]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_2382 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VPUCM_2585 Aconitate hydratase 2 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20471 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VPUCM_20292 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPUCM_21252 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPUCM_2778 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPUCM_2902 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VPUCM_2817 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_2507 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20706 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20704 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPUCM_20708 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_20705 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VPUCM_20112 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPUCM_0062 4-hydroxy-2-oxoglutarate aldolase 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPUCM_20077 4-hydroxy-2-oxoglutarate aldolase 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPUCM_1607 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPUCM_21155 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPUCM_1608 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VPUCM_1609 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VPUCM_0965 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vph00640]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_1723 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPUCM_1134 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_21032 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_1133 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPUCM_20991 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPUCM_20992 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPUCM_20993 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_1106 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPUCM_0027 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_0935 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VPUCM_2978 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPUCM_2979 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPUCM_2278 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_20697 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_2375 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPUCM_2374 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPUCM_20556 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_21021 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_1727 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D VPUCM_1725 2-methylcitrate dehydratase FeS dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D VPUCM_1724 2-methylaconitate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D VPUCM_2585 Aconitate hydratase 2 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPUCM_1728 Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D VPUCM_20140 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPUCM_20619 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VPUCM_20732 Iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D VPUCM_0383 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:vph00650]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_20776 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_1986 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPUCM_20474 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D VPUCM_20471 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VPUCM_2629 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPUCM_2379 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2378 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2381 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPUCM_2380 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_2712 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1853 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1106 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPUCM_20549 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_21028 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_21067 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_20520 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_0373 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_3140 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_0374 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPUCM_3141 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPUCM_20366 2-deoxy-D-gluconate 3-dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vph00660]
D VPUCM_0373 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_3140 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_0374 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPUCM_3141 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPUCM_2375 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPUCM_2374 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPUCM_0365 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VPUCM_0364 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VPUCM_0366 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vph00562]
D VPUCM_0578 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VPUCM_20556 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_21021 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_0264 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vph00190]
D VPUCM_1085 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VPUCM_2379 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2378 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2381 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPUCM_2380 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_0433 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VPUCM_0434 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPUCM_0435 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPUCM_21011 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21097 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21012 Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D VPUCM_21103 Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D VPUCM_21105 Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D VPUCM_21106 Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D VPUCM_21104 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPUCM_21098 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPUCM_1645 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VPUCM_1644 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VPUCM_1643 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VPUCM_1642 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VPUCM_21013 Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D VPUCM_21014 Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D VPUCM_21015 Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D VPUCM_2158 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPUCM_20541 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPUCM_2157 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPUCM_20540 putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPUCM_20534 hypothetical protein K08738 CYC; cytochrome c
D VPUCM_3153 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VPUCM_3151 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VPUCM_3152 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VPUCM_3154 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VPUCM_3150 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VPUCM_3157 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPUCM_3155 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VPUCM_3156 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VPUCM_0335 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VPUCM_2050 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VPUCM_1851 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VPUCM_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPUCM_0565 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:vph00710]
D VPUCM_2682 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPUCM_20446 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2245 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2681 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0787 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0269 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPUCM_2687 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPUCM_20496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPUCM_2674 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VPUCM_2891 Phosphoribulokinase-like protein, function unknown K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D VPUCM_0264 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPUCM_2844 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPUCM_20497 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VPUCM_2863 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPUCM_0124 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPUCM_2869 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:vph00720]
D VPUCM_20356 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPUCM_2863 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_1335 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VPUCM_2971 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPUCM_21136 Putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D VPUCM_2379 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2378 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2381 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VPUCM_2380 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_2374 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPUCM_2375 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_2197 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPUCM_2585 Aconitate hydratase 2 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPUCM_0935 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VPUCM_2978 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPUCM_2979 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPUCM_2278 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_20697 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_20736 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VPUCM_0980 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VPUCM_2865 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VPUCM_1133 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPUCM_1134 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_21032 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:vph00680]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_20064 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D VPUCM_1607 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPUCM_21155 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPUCM_1608 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VPUCM_1609 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VPUCM_2507 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20706 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_2817 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPUCM_2778 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPUCM_2863 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_2681 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0787 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0269 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_2053 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPUCM_2054 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPUCM_2178 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPUCM_20122 Cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPUCM_20123 Biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPUCM_20666 Glutamate synthase [NADPH] large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D VPUCM_1134 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_21032 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_1133 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_20356 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VPUCM_2926 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPUCM_2675 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPUCM_1971 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPUCM_0812 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vph00910]
D VPUCM_20965 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPUCM_20964 Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPUCM_20963 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPUCM_20478 Periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D VPUCM_20477 Nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D VPUCM_20971 Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D VPUCM_20872 Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPUCM_20962 Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPUCM_20871 Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VPUCM_20961 Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VPUCM_1289 Cytochrome c552 precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D VPUCM_2026 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D VPUCM_20285 Enoyl-[acyl-carrier-protein] reductase [FMN] K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D VPUCM_1680 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_0474 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0476 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0473 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_0475 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_2017 Formate dehydrogenase-O, major subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_2600 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VPUCM_21332 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
D VPUCM_20214 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vph00920]
D VPUCM_0217 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0319 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0220 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_0318 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_0219 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPUCM_0321 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPUCM_0139 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VPUCM_2825 Phosphoadenylyl-sulfate reductase [thioredoxin] K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VPUCM_2827 Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VPUCM_2826 Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VPUCM_1996 Cytochrome c553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D VPUCM_2086 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPUCM_2084 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPUCM_2085 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPUCM_2016 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_20503 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_3037 Thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VPUCM_0198 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_2931 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_1046 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPUCM_2431 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPUCM_1830 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VPUCM_2867 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPUCM_1578 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VPUCM_1579 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VPUCM_1580 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vph00061]
D VPUCM_0935 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VPUCM_2978 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VPUCM_2979 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VPUCM_2278 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_20697 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPUCM_0995 Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D VPUCM_0996 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
D VPUCM_2124 Acyl carrier protein K02078 acpP; acyl carrier protein
D VPUCM_2126 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPUCM_20856 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPUCM_2127 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPUCM_0985 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_2283 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_0982 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_2123 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_21016 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20561 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20387 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_0983 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_2125 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_1673 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VPUCM_0930 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPUCM_20776 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_1986 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_0372 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0971 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1255 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20526 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vph00071]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_0951 Butyryl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VPUCM_1987 Butyryl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VPUCM_0372 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0971 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1255 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20526 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vph00561]
D VPUCM_20112 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPUCM_0384 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D VPUCM_0385 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D VPUCM_0383 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VPUCM_0854 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VPUCM_3032 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPUCM_2128 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VPUCM_0404 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPUCM_2757 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VPUCM_0195 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPUCM_20417 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPUCM_2034 Lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VPUCM_0639 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VPUCM_2052 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vph00564]
D VPUCM_2930 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VPUCM_0852 Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VPUCM_3032 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPUCM_0404 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPUCM_2757 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VPUCM_0195 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPUCM_20417 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPUCM_20689 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_1958 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_3058 Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VPUCM_20139 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VPUCM_0858 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VPUCM_0924 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VPUCM_3019 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VPUCM_2921 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VPUCM_1274 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VPUCM_2537 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VPUCM_20124 Phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VPUCM_2032 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D VPUCM_20324 Cardiolipin synthetase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:vph00565]
D VPUCM_20689 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_1958 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:vph00600]
D VPUCM_2052 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VPUCM_2469 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_2576 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D VPUCM_20689 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_1958 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D VPUCM_20689 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_1958 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:vph00592]
D VPUCM_20689 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_1958 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vph01040]
D VPUCM_20651 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VPUCM_20777 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VPUCM_1049 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VPUCM_1249 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vph00230]
D VPUCM_20894 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_0421 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_20211 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_0140 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VPUCM_0809 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_2484 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VPUCM_2274 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VPUCM_2994 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VPUCM_2373 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VPUCM_1921 Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VPUCM_2556 Phosphoribosylformylglycinamidine synthase, synthetase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VPUCM_2372 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VPUCM_3117 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VPUCM_3116 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VPUCM_1955 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VPUCM_1205 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VPUCM_2993 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPUCM_2267 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VPUCM_20756 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPUCM_2475 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2010 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2643 5-nucleotidase SurE Exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPUCM_1209 Inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VPUCM_20737 Inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VPUCM_0063 Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_21306 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_0810 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_20051 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VPUCM_0547 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VPUCM_2601 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VPUCM_0600 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VPUCM_0589 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPUCM_0541 Inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VPUCM_2703 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VPUCM_2549 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VPUCM_0601 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VPUCM_20519 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VPUCM_0157 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VPUCM_1284 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPUCM_1283 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VPUCM_20835 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VPUCM_1026 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR K01129 dgt; dGTPase [EC:3.1.5.1]
D VPUCM_0603 hypothetical protein K01129 dgt; dGTPase [EC:3.1.5.1]
D VPUCM_1027 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VPUCM_0155 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VPUCM_0559 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VPUCM_3084 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VPUCM_2651 GTP pyrophosphokinase, (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VPUCM_3071 Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VPUCM_1841 Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D VPUCM_20359 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPUCM_2908 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPUCM_0110 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VPUCM_2524 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VPUCM_20402 Adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D VPUCM_0316 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VPUCM_2401 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPUCM_2650 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPUCM_0423 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VPUCM_0356 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VPUCM_0219 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPUCM_0321 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VPUCM_0217 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0319 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0220 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_0318 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:vph00240]
D VPUCM_0462 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPUCM_0461 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPUCM_2753 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VPUCM_2754 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VPUCM_21226 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VPUCM_1679 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VPUCM_0180 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VPUCM_2099 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VPUCM_0921 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VPUCM_0589 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPUCM_2650 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPUCM_2789 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VPUCM_1900 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D VPUCM_2649 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VPUCM_2104 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VPUCM_2139 Uridine kinase [C1] K00876 udk; uridine kinase [EC:2.7.1.48]
D VPUCM_20756 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPUCM_2475 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2010 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2643 5-nucleotidase SurE Exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPUCM_20210 5'-nucleotidase YjjG K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VPUCM_20600 N-Ribosylnicotinamide phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VPUCM_1075 Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VPUCM_20051 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VPUCM_2371 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VPUCM_0316 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VPUCM_2524 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VPUCM_1920 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VPUCM_20434 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPUCM_20835 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VPUCM_1284 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPUCM_1283 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VPUCM_1027 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VPUCM_20486 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VPUCM_2120 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VPUCM_0808 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VPUCM_1228 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VPUCM_0514 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vph00250]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_2665 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VPUCM_20358 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPUCM_2241 L-asparaginase I, cytoplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPUCM_2882 Isoaspartyl aminopeptidase Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPUCM_2397 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VPUCM_1028 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPUCM_2817 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPUCM_1181 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VPUCM_2961 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VPUCM_2859 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPUCM_2858 Argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VPUCM_20359 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPUCM_2908 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VPUCM_1205 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VPUCM_2753 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VPUCM_2754 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_2712 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1853 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_0474 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0476 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0473 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_0475 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_2017 Formate dehydrogenase-O, major subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VPUCM_1680 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPUCM_21531 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_0462 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPUCM_0461 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPUCM_2705 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPUCM_0379 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPUCM_2274 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vph00260]
D VPUCM_2820 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_2634 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_1800 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_0485 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2866 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2281 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2227 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_0486 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VPUCM_0487 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VPUCM_20895 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VPUCM_2507 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20706 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_2817 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPUCM_2778 Hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPUCM_20112 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPUCM_2926 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VPUCM_2675 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPUCM_1971 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPUCM_0812 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VPUCM_21339 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VPUCM_21338 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VPUCM_20704 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPUCM_20708 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_20705 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VPUCM_3019 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VPUCM_20565 Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D VPUCM_20564 Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D VPUCM_1329 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPUCM_20246 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPUCM_3144 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VPUCM_1970 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VPUCM_2947 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPUCM_1257 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VPUCM_1258 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPUCM_21058 Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPUCM_1276 Diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPUCM_1802 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPUCM_1803 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D VPUCM_1801 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vph00270]
D VPUCM_0198 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_2931 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_1046 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPUCM_2431 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VPUCM_2033 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VPUCM_2821 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPUCM_2064 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPUCM_1246 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPUCM_2688 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VPUCM_1253 N-(3-hydroxybutanoyl)-L-homoserine lactone synthase LuxM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VPUCM_0471 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VPUCM_20588 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VPUCM_0547 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPUCM_1685 Free methionine-(R)-sulfoxide reductase, contains GAF domain K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VPUCM_p0001 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPUCM_2623 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPUCM_1236 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D VPUCM_2820 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_2634 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_1800 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_0485 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2866 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2281 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2227 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_1830 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VPUCM_2867 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPUCM_0631 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D VPUCM_3142 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPUCM_2625 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VPUCM_2693 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_2016 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_20503 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_20140 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPUCM_2947 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPUCM_0347 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPUCM_1329 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPUCM_20246 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VPUCM_2675 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPUCM_1971 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vph00280]
D VPUCM_3142 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPUCM_20991 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPUCM_20992 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPUCM_20993 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_20553 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VPUCM_21024 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_20560 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPUCM_21253 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPUCM_21017 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPUCM_20556 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_21021 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_20550 Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D VPUCM_20552 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPUCM_21026 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPUCM_20551 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPUCM_21027 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPUCM_20549 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_21028 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_21067 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_20520 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vph00290]
D VPUCM_3144 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VPUCM_0365 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VPUCM_0364 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VPUCM_0366 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VPUCM_0373 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_3140 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_0374 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPUCM_3141 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPUCM_0036 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VPUCM_3143 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VPUCM_3142 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPUCM_0017 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VPUCM_1028 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPUCM_0367 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VPUCM_21195 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vph00300]
D VPUCM_2820 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_2634 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_1800 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_0485 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2866 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2281 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2227 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2359 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VPUCM_0460 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VPUCM_0859 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VPUCM_2896 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPUCM_2355 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VPUCM_3067 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VPUCM_21484 Vibrioferrin decarboxylase protein PvsE K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPUCM_3068 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPUCM_20379 Aspartate aminotransferase (AspB-4) K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D VPUCM_0446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPUCM_0447 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vph00310]
D VPUCM_2376 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_2947 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPUCM_2987 Lysine decarboxylase, inducible K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_2712 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1853 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_20183 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VPUCM_1948 Fe-S protein, lactate dehydrogenase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VPUCM_0633 putative exported protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
C 00220 Arginine biosynthesis [PATH:vph00220]
D VPUCM_2752 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VPUCM_2859 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPUCM_2858 Argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VPUCM_2751 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D VPUCM_2705 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_0462 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VPUCM_0461 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VPUCM_1680 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1028 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPUCM_0868 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VPUCM_1403 Acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D VPUCM_2860 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VPUCM_2861 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VPUCM_2896 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPUCM_2862 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vph00330]
D VPUCM_20434 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPUCM_20165 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VPUCM_20164 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VPUCM_1854 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D VPUCM_1855 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D VPUCM_21457 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VPUCM_1277 Carboxynorspermidine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D VPUCM_1278 Carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D VPUCM_21165 Spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VPUCM_1407 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VPUCM_2895 Arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VPUCM_2894 Succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VPUCM_1908 Succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VPUCM_1860 Gamma-glutamyl-putrescine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D VPUCM_1856 Gamma-glutamyl-putrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D VPUCM_1857 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D VPUCM_2699 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VPUCM_21531 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPUCM_2546 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VPUCM_2545 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1890 Ornithine cyclodeaminase K19742 lhpI; 1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.49]
C 00340 Histidine metabolism [PATH:vph00340]
D VPUCM_1215 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VPUCM_1222 Phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VPUCM_1220 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VPUCM_1219 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VPUCM_1221 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VPUCM_1218 Histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_1216 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VPUCM_0990 Putative histidine ammonia-lyase protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VPUCM_1945 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VPUCM_1944 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VPUCM_1942 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VPUCM_1943 Formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:vph00350]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPUCM_1875 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPUCM_1874 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VPUCM_1872 Maleylacetoacetate isomerase Glutathione S-transferase, zeta K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VPUCM_1873 Fumarylacetoacetase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPUCM_0265 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VPUCM_2712 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1853 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vph00360]
D VPUCM_21066 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPUCM_21318 Histone acetyltransferase HPA2 K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D VPUCM_1875 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPUCM_0624 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VPUCM_20668 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPUCM_21187 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vph00380]
D VPUCM_2376 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20185 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D VPUCM_20292 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPUCM_21252 Catalase K03781 katE; catalase [EC:1.11.1.6]
D VPUCM_20668 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPUCM_21187 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vph00400]
D VPUCM_20493 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_1693 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_0534 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_2847 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VPUCM_2977 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VPUCM_3113 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VPUCM_2848 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VPUCM_2188 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VPUCM_2290 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VPUCM_1262 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPUCM_1261 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VPUCM_1260 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VPUCM_1259 Indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VPUCM_1257 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VPUCM_1258 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPUCM_21058 Tryptophan synthase beta chain like protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPUCM_0535 Chorismate mutase I K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VPUCM_0542 Chorismate mutase I K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VPUCM_3147 Cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPUCM_21066 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vph00410]
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_2595 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_20556 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPUCM_21021 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:vph00430]
D VPUCM_3091 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPUCM_1181 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VPUCM_1680 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPUCM_1133 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPUCM_1134 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VPUCM_21032 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vph00440]
D VPUCM_20226 Phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VPUCM_20228 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VPUCM_1431 toxin resistance protein K03823 pat; phosphinothricin acetyltransferase [EC:2.3.1.183]
C 00450 Selenocompound metabolism [PATH:vph00450]
D VPUCM_2867 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VPUCM_2033 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VPUCM_2821 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPUCM_2064 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPUCM_1246 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VPUCM_1967 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VPUCM_0217 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0319 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0220 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_0318 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_2141 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vph00460]
D VPUCM_3091 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPUCM_20358 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPUCM_2241 L-asparaginase I, cytoplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPUCM_2882 Isoaspartyl aminopeptidase Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPUCM_2507 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20706 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vph00470]
D VPUCM_2837 Alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_20886 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_20791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPUCM_2947 Alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VPUCM_2705 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPUCM_3022 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VPUCM_0449 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPUCM_20314 EBNA-1 nuclear protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D VPUCM_20313 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D VPUCM_1970 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VPUCM_3067 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VPUCM_21484 Vibrioferrin decarboxylase protein PvsE K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPUCM_3068 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPUCM_1893 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D VPUCM_1892 D-amino acid dehydrogenase family protein in hydroxy-L-proline catabolic cluster K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D VPUCM_1889 1-pyrroline-4-hydroxy-2-carboxylate deaminase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D VPUCM_1894 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VPUCM_0624 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vph00480]
D VPUCM_3091 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPUCM_20783 Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VPUCM_20781 Allophanate hydrolase 2 subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D VPUCM_2625 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VPUCM_2693 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VPUCM_2735 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VPUCM_0588 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VPUCM_1681 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VPUCM_2551 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VPUCM_20995 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPUCM_21251 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPUCM_0065 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VPUCM_2197 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VPUCM_1788 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VPUCM_1790 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPUCM_20427 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VPUCM_2856 Peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D VPUCM_20401 Antioxidant, AhpC/Tsa family K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D VPUCM_21457 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vph00511]
D VPUCM_0838 Evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VPUCM_0837 Evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D VPUCM_2469 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_2576 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_20341 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:vph00540]
D VPUCM_0931 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VPUCM_0456 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VPUCM_0929 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VPUCM_1225 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VPUCM_0932 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VPUCM_1096 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VPUCM_0250 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPUCM_2766 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPUCM_0248 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPUCM_2476 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPUCM_0249 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPUCM_1098 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPUCM_0208 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VPUCM_0181 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_1826 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_2596 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_0210 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VPUCM_1105 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VPUCM_20416 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPUCM_0196 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VPUCM_0952 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VPUCM_0418 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VPUCM_2514 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VPUCM_0211 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VPUCM_0209 ADP-heptose--lipooligosaccharide heptosyltransferase, putative K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:vph00542]
D VPUCM_0216 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0234 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vph00541]
D VPUCM_2814 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_0263 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPUCM_20785 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_0840 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VPUCM_0262 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VPUCM_2096 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPUCM_0240 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPUCM_0243 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VPUCM_0241 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VPUCM_0242 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D VPUCM_21259 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_20852 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPUCM_21107 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPUCM_3149 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:vph00550]
D VPUCM_2758 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPUCM_3017 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPUCM_0452 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VPUCM_0449 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPUCM_0446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPUCM_20791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPUCM_0447 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VPUCM_0923 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VPUCM_0407 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0369 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0448 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPUCM_0451 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VPUCM_21439 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPUCM_2854 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPUCM_2587 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPUCM_2500 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPUCM_0445 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPUCM_21418 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_20398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_2503 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_0669 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vph00552]
D VPUCM_0407 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0369 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0216 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0234 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vph00543]
D VPUCM_21237 Capsular polysaccharide synthesis enzyme CpsA, sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VPUCM_0216 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0234 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0198 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_2931 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vph00730]
D VPUCM_3106 Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VPUCM_20131 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VPUCM_3104 Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VPUCM_0581 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPUCM_2531 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPUCM_3101 Thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VPUCM_2536 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VPUCM_3102 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VPUCM_20126 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VPUCM_3105 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VPUCM_20125 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VPUCM_2538 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VPUCM_21451 putative GTPase EngC - like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPUCM_2920 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPUCM_20979 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2251 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_1083 Thiamine kinase Adenosylcobinamide kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D VPUCM_2401 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPUCM_20127 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:vph00740]
D VPUCM_1297 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_20006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_2541 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VPUCM_2543 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VPUCM_3064 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VPUCM_20428 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VPUCM_2540 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VPUCM_1523 Lumazine protein, riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VPUCM_2542 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VPUCM_0521 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VPUCM_3077 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VPUCM_21425 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D VPUCM_20126 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VPUCM_20894 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_0421 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_20211 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPUCM_0338 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vph00750]
D VPUCM_21534 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VPUCM_21454 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VPUCM_2684 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VPUCM_2282 Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VPUCM_1971 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VPUCM_0359 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VPUCM_2655 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VPUCM_0487 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vph00760]
D VPUCM_2665 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VPUCM_1141 Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VPUCM_2608 Quinolinate phosphoribosyltransferase [decarboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VPUCM_20297 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VPUCM_0063 Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_21306 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_0810 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPUCM_20756 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VPUCM_2475 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2010 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VPUCM_2643 5-nucleotidase SurE Exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPUCM_21222 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VPUCM_2650 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPUCM_3004 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VPUCM_21223 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VPUCM_2638 C-terminal domain of CinA type S K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VPUCM_20294 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VPUCM_1626 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VPUCM_0654 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VPUCM_3028 Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VPUCM_20815 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VPUCM_20814 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VPUCM_2712 Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPUCM_1853 Gamma-glutamyl-aminobutyraldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vph00770]
D VPUCM_0373 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_3140 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VPUCM_0374 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VPUCM_3141 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VPUCM_0036 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VPUCM_3143 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VPUCM_2594 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VPUCM_0876 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VPUCM_2595 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VPUCM_3015 Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D VPUCM_0183 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VPUCM_2650 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VPUCM_0191 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VPUCM_2613 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VPUCM_2654 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VPUCM_20745 Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VPUCM_3142 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPUCM_1981 Glutamate decarboxylase, eukaryotic type K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:vph00780]
D VPUCM_1193 Biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VPUCM_0985 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_2283 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_0982 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_2123 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_21016 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20561 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20387 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_0983 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_2125 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_0930 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPUCM_0143 Biotin synthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VPUCM_1192 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VPUCM_1190 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VPUCM_1194 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VPUCM_1191 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VPUCM_3016 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vph00785]
D VPUCM_2505 Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VPUCM_2506 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_2605 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VPUCM_2604 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VPUCM_2377 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VPUCM_2376 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPUCM_20991 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPUCM_20992 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPUCM_20993 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPUCM_20704 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPUCM_20708 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPUCM_20705 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vph00790]
D VPUCM_20508 GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VPUCM_20979 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2251 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_1956 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPUCM_20657 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D VPUCM_0405 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VPUCM_0406 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VPUCM_2593 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VPUCM_0675 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VPUCM_0355 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VPUCM_2277 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VPUCM_1297 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_20006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_2541 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VPUCM_2898 Para-aminobenzoate synthase, amidotransferase component PabAb K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VPUCM_1334 Para-aminobenzoate synthase, aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VPUCM_2122 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VPUCM_1326 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VPUCM_21065 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPUCM_21066 Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VPUCM_1718 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VPUCM_1717 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VPUCM_2521 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VPUCM_1120 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VPUCM_1122 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VPUCM_1124 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VPUCM_1121 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VPUCM_1593 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VPUCM_20507 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VPUCM_1594 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vph00670]
D VPUCM_0355 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VPUCM_20736 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VPUCM_0980 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VPUCM_2507 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_20706 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPUCM_2373 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VPUCM_2993 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPUCM_3124 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VPUCM_20708 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPUCM_2821 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VPUCM_0514 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VPUCM_0965 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VPUCM_2865 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VPUCM_2673 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vph00860]
D VPUCM_2462 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPUCM_2481 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VPUCM_2563 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VPUCM_0099 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VPUCM_3072 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VPUCM_3073 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VPUCM_3001 Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VPUCM_3114 Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VPUCM_0109 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VPUCM_0032 Protoporphyrinogen IX oxidase, oxygen-independent, HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VPUCM_2400 Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VPUCM_3074 Uroporphyrinogen-III methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPUCM_20869 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPUCM_20970 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPUCM_0317 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPUCM_1695 Siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D VPUCM_21011 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21097 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21098 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPUCM_0758 Aerobic cobaltochelatase CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D VPUCM_2137 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VPUCM_20825 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VPUCM_0470 Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VPUCM_1911 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VPUCM_1912 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VPUCM_1913 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VPUCM_1910 Alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VPUCM_21205 Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D VPUCM_2870 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vph00130]
D VPUCM_3034 Chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VPUCM_3033 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VPUCM_3079 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VPUCM_0338 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VPUCM_2669 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VPUCM_1285 3-demethylubiquinol 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D VPUCM_2670 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VPUCM_0091 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 2-heptaprenyl-1,4-naphthoquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VPUCM_2488 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VPUCM_1029 Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VPUCM_1030 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VPUCM_1031 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VPUCM_1033 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VPUCM_1034 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VPUCM_1032 Naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VPUCM_20765 Uncharacterized protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VPUCM_0274 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VPUCM_2366 Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VPUCM_21543 Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VPUCM_1875 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vph00900]
D VPUCM_2536 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VPUCM_0925 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VPUCM_2646 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VPUCM_2483 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VPUCM_2645 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VPUCM_0592 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VPUCM_0525 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20853 Hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D VPUCM_0338 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VPUCM_20269 Isopentenyl-diphosphate delta-isomerase, FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D VPUCM_2535 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VPUCM_0349 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VPUCM_0923 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:vph00907]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_20549 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_21028 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VPUCM_2687 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPUCM_20496 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:vph00523]
D VPUCM_0240 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPUCM_0243 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VPUCM_0241 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VPUCM_0242 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D VPUCM_1029 Menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D VPUCM_0243 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vph00332]
D VPUCM_2546 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VPUCM_2545 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vph00261]
D VPUCM_0217 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0319 Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VPUCM_0220 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_0318 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VPUCM_2820 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_2634 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_1800 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VPUCM_0485 Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2866 Aspartokinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VPUCM_2281 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2227 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VPUCM_2359 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VPUCM_0460 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vph00521]
D VPUCM_2385 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VPUCM_0578 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VPUCM_0240 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPUCM_0243 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VPUCM_0241 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VPUCM_0242 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:vph00525]
D VPUCM_0240 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VPUCM_0243 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:vph00401]
D VPUCM_0535 Chorismate mutase I K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VPUCM_1262 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPUCM_1261 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VPUCM_2126 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPUCM_21016 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20561 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20387 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_0983 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_2125 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VPUCM_0995 Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D VPUCM_0996 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
D VPUCM_2124 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vph00999]
D VPUCM_2688 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VPUCM_3113 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vph00362]
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_20997 Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D VPUCM_20537 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VPUCM_0586 Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2629 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vph00627]
D VPUCM_1703 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VPUCM_0338 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:vph00364]
D VPUCM_20968 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:vph00625]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:vph00361]
D VPUCM_20968 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:vph00623]
D VPUCM_20968 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vph00633]
D VPUCM_21415 Oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VPUCM_20674 2,4-dienoyl-CoA reductase [NADPH] K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D VPUCM_20369 2,4-dienoyl-CoA reductase [NADPH] K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VPUCM_0028 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPUCM_2297 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vph00643]
D VPUCM_1874 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VPUCM_1872 Maleylacetoacetate isomerase Glutathione S-transferase, zeta K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VPUCM_1873 Fumarylacetoacetase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vph00930]
D VPUCM_0029 Enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VPUCM_2296 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vph00626]
D VPUCM_21077 Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPUCM_20065 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPUCM_2224 Alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D VPUCM_20997 Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vph03020]
D VPUCM_3007 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPUCM_3006 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPUCM_0307 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPUCM_0156 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vph03010]
D VPUCM_2103 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VPUCM_0919 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VPUCM_0288 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VPUCM_0306 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VPUCM_0299 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VPUCM_2843 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VPUCM_2873 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VPUCM_0296 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VPUCM_0432 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VPUCM_0281 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VPUCM_0305 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VPUCM_2874 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VPUCM_0304 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VPUCM_0295 SSU ribosomal protein S14p (S29e) SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D VPUCM_0683 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VPUCM_2619 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VPUCM_0291 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VPUCM_2841 SSU ribosomal protein S18p SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D VPUCM_0286 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VPUCM_0519 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VPUCM_0401 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VPUCM_3010 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D VPUCM_0285 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VPUCM_0282 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VPUCM_0283 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VPUCM_0294 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VPUCM_0297 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VPUCM_3008 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D VPUCM_2840 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VPUCM_3009 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D VPUCM_3011 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D VPUCM_0431 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VPUCM_0292 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VPUCM_0301 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VPUCM_0289 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VPUCM_0308 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VPUCM_0298 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VPUCM_2616 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VPUCM_1935 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VPUCM_0350 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VPUCM_0287 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VPUCM_0284 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VPUCM_0293 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VPUCM_2007 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VPUCM_0351 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VPUCM_0186 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VPUCM_0290 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VPUCM_0300 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VPUCM_0907 LSU ribosomal protein L31p LSU ribosomal protein L31p, zinc-independent K02909 RP-L31; large subunit ribosomal protein L31
D VPUCM_0280 LSU ribosomal protein L31p LSU ribosomal protein L31p, zinc-dependent K02909 RP-L31; large subunit ribosomal protein L31
D VPUCM_2129 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VPUCM_0187 LSU ribosomal protein L33p LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D VPUCM_0005 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VPUCM_1936 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VPUCM_0303 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VPUCM_3163 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3251 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3258 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3292 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3276 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3175 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3282 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_21557 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3275 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3281 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3285 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3288 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_21562 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3167 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3178 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3248 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3256 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3179 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_21563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3247 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3168 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3274 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3245 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vph00970]
D VPUCM_3176 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_3249 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_21560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_3200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3184 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3223 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3227 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3226 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3229 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3228 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3238 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3241 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3191 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3243 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3244 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3273 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3254 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3286 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3193 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_21567 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_21570 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_3204 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3208 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3212 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3221 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3216 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_21558 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3257 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3164 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3291 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3177 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_21566 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3278 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_21569 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3264 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3266 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3194 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3196 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3262 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3272 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3268 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3263 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3170 tRNA-His K14226 tRNA-His; tRNA His
D VPUCM_3172 tRNA-His K14226 tRNA-His; tRNA His
D VPUCM_3250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPUCM_21565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3182 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_21568 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3213 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3211 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3217 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3219 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3209 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3207 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3252 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_21559 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3165 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3290 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3174 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3202 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3214 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3218 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3205 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3183 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3269 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3267 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3259 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3271 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3261 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3232 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3239 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3237 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3234 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3171 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_3201 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_3173 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_21564 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_21571 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3199 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3283 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3231 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3233 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3236 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3242 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3246 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3277 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3181 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPUCM_3253 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPUCM_3185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3189 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3188 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3187 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3186 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3279 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_21561 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3289 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3166 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3197 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3198 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_2462 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPUCM_2392 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VPUCM_2635 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_0597 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_1847 Ser-tRNA(Ala) deacylase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_2163 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPUCM_1323 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPUCM_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPUCM_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPUCM_1938 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPUCM_1186 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPUCM_1227 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPUCM_2141 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPUCM_3124 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VPUCM_2737 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPUCM_2495 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPUCM_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPUCM_0504 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPUCM_0963 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPUCM_0905 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPUCM_0593 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPUCM_1927 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPUCM_1926 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPUCM_2558 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_20352 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_1174 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPUCM_2901 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vph03060]
D VPUCM_0302 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPUCM_3013 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPUCM_0677 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPUCM_20467 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_0576 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_20468 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_0577 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_0575 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPUCM_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPUCM_0458 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPUCM_2929 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPUCM_2620 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPUCM_3041 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VPUCM_0094 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPUCM_0095 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPUCM_0096 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VPUCM_2659 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VPUCM_0523 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vph04122]
D VPUCM_0581 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPUCM_2016 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_20503 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPUCM_0024 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VPUCM_2875 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VPUCM_2876 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VPUCM_2877 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VPUCM_1702 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VPUCM_1207 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VPUCM_1124 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VPUCM_1120 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VPUCM_1123 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D VPUCM_20506 Molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VPUCM_1122 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VPUCM_1121 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VPUCM_2531 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPUCM_3103 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D VPUCM_3104 Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vph03018]
D VPUCM_0510 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VPUCM_2134 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPUCM_3083 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPUCM_0684 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VPUCM_20374 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_20746 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21514 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21053 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21060 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_1005 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_2904 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPUCM_21035 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPUCM_0897 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_3087 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_3081 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_0777 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0658 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_20275 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2950 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2913 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPUCM_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPUCM_0565 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VPUCM_2592 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vph03030]
D VPUCM_0720 DNA polymerase III, epsilon subunit-like protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20068 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1315 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20695 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0846 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0945 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1805 DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2975 3'-5' exonuclease domain epsilon subunit of DNA polymerase III, PA3232-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0934 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPUCM_2266 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPUCM_2119 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPUCM_2497 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPUCM_0694 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VPUCM_2736 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPUCM_0010 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPUCM_2838 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VPUCM_0399 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0944 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPUCM_0933 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vph03410]
D VPUCM_2213 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VPUCM_0491 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VPUCM_2708 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VPUCM_0189 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VPUCM_20039 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPUCM_2036 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VPUCM_2205 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VPUCM_0489 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_0502 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vph03420]
D VPUCM_1088 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VPUCM_2815 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VPUCM_1116 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VPUCM_1273 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VPUCM_3092 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vph03430]
D VPUCM_2639 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VPUCM_2915 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VPUCM_0509 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VPUCM_3092 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPUCM_1917 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VPUCM_0599 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VPUCM_2534 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VPUCM_0502 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0934 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPUCM_0010 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPUCM_2266 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPUCM_2497 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPUCM_2119 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPUCM_0720 DNA polymerase III, epsilon subunit-like protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20068 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1315 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20695 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0846 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0945 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1805 DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2975 3'-5' exonuclease domain epsilon subunit of DNA polymerase III, PA3232-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2736 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPUCM_0694 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPUCM_2845 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vph03440]
D VPUCM_0502 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0011 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VPUCM_2656 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VPUCM_2264 Recombination protein RecR K06187 recR; recombination protein RecR
D VPUCM_2637 RecA protein K03553 recA; recombination protein RecA
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_2160 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VPUCM_2159 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VPUCM_2162 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VPUCM_0153 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VPUCM_0865 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VPUCM_0864 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPUCM_0866 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPUCM_0934 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPUCM_0010 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPUCM_2266 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPUCM_2497 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPUCM_2119 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPUCM_0720 DNA polymerase III, epsilon subunit-like protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20068 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1315 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20695 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0846 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0945 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1805 DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2975 3'-5' exonuclease domain epsilon subunit of DNA polymerase III, PA3232-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2736 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPUCM_0694 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VPUCM_0279 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VPUCM_2842 Primosomal replication protein N K02686 priB; primosomal replication protein N
D VPUCM_2203 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vph03250]
D VPUCM_0883 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vph02010]
D VPUCM_1597 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VPUCM_1596 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D VPUCM_1595 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VPUCM_20965 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPUCM_20964 Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPUCM_20963 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPUCM_20128 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPUCM_20129 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPUCM_20130 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VPUCM_20824 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VPUCM_20823 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D VPUCM_20822 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPUCM_21048 Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D VPUCM_2581 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPUCM_20229 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPUCM_2580 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPUCM_20232 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPUCM_2579 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPUCM_20231 ABC transporter of unknown compound (not Fe3+), ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPUCM_0339 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VPUCM_0340 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D VPUCM_0341 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VPUCM_20351 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1627 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1628 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1629 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D VPUCM_1630 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VPUCM_1631 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VPUCM_20566 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPUCM_1809 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPUCM_20567 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPUCM_1808 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPUCM_20568 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPUCM_1807 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPUCM_21235 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPUCM_21234 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VPUCM_21233 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VPUCM_21236 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VPUCM_2761 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VPUCM_2762 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VPUCM_2763 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VPUCM_2760 Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D VPUCM_2764 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VPUCM_21485 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPUCM_20593 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPUCM_20592 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VPUCM_20591 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VPUCM_20590 Ribose ABC transport system, high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VPUCM_21292 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_0558 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_21040 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_21291 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPUCM_0561 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPUCM_21290 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPUCM_0562 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPUCM_21289 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPUCM_0563 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPUCM_21001 Arginine ABC transporter, periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VPUCM_20999 Arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D VPUCM_21000 Arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VPUCM_21002 Arginine ABC transporter, ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_1696 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VPUCM_1697 Glutamate Aspartate transport system permease protein GltJ K09970 aapQ; general L-amino acid transport system permease protein
D VPUCM_1698 Glutamate transport membrane-spanning protein K09971 aapM; general L-amino acid transport system permease protein
D VPUCM_1699 ABC-type polar amino acid transport system, ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_0008 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VPUCM_0007 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VPUCM_0006 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VPUCM_1110 Lysine-arginine-ornithine-binding periplasmic protein precursor K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VPUCM_1112 Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D VPUCM_1111 Arginine/ornithine ABC transporter, permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VPUCM_1109 Arginine/ornithine ABC transporter, ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_20529 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPUCM_20527 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPUCM_20528 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPUCM_20525 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPUCM_20530 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPUCM_0397 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPUCM_2518 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPUCM_2517 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D VPUCM_2516 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VPUCM_1878 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1125 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_21544 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1879 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1126 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1880 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1127 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1881 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_1128 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_21325 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1882 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1129 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_2044 Peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPUCM_2045 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VPUCM_2046 Peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VPUCM_2047 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPUCM_2048 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VPUCM_0167 ABC-type oligopeptide transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D VPUCM_2098 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D VPUCM_0165 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VPUCM_0166 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VPUCM_21477 Ferrichrome ABC transporter, periplasmic iron-binding protein PvuB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPUCM_21475 Ferrichrome ABC transporter (permease) PvuD K23182 fecD; ferric citrate transport system permease protein
D VPUCM_21476 Ferrichrome ABC transporter (permease) PvuC K23183 fecC; ferric citrate transport system permease protein
D VPUCM_21474 Ferrichrome ABC transporter (ATP binding subunit) PvuE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPUCM_21271 Ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPUCM_21272 Ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VPUCM_21270 Ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VPUCM_0469 Vitamin B12 ABC transporter, B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VPUCM_1907 Vitamin B12 ABC transporter, permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VPUCM_1906 Vitamin B12 ABC transporter, ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VPUCM_20156 Cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPUCM_0956 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VPUCM_20158 ABC transporter in pyoverdin gene cluster, permease component K09816 znuB; zinc transport system permease protein
D VPUCM_0954 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D VPUCM_20157 ABC transporter in pyoverdin gene cluster, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPUCM_0955 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPUCM_21314 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D VPUCM_0239 Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D VPUCM_0237 Polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D VPUCM_0238 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D VPUCM_1090 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VPUCM_1092 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VPUCM_1091 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VPUCM_2308 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE K02196 ccmD; heme exporter protein D
D VPUCM_2309 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D VPUCM_2310 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D VPUCM_2311 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VPUCM_2734 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VPUCM_2733 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D VPUCM_2769 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VPUCM_3039 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPUCM_3040 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPUCM_1095 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VPUCM_1564 ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_1563 Putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_21520 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_21268 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_21540 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPUCM_21275 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPUCM_1969 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VPUCM_1968 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VPUCM_20217 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:vph02060]
D VPUCM_2433 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VPUCM_2432 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21488 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2117 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2393 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPUCM_2512 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPUCM_21548 PTS system, N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPUCM_21139 PTS system, IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPUCM_21138 PTS system, mannitol-specific IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPUCM_0390 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPUCM_2719 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2721 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2720 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPUCM_20224 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPUCM_20223 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPUCM_20222 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPUCM_20716 Fructose-specific phosphocarrier protein HPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VPUCM_0386 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D VPUCM_20714 PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPUCM_21255 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPUCM_20287 Phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPUCM_20715 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VPUCM_0511 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VPUCM_2774 Phosphocarrier protein, nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VPUCM_2772 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21256 Putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vph03070]
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_1773 Type III secretion cytoplasmic protein (YscF) K03221 yscF; type III secretion protein F
D VPUCM_1750 Type III secretion spans bacterial envelope protein (YscO) K04056 yscO; type III secretion protein O
D VPUCM_1751 Type III secretion protein (YscP) K04057 yscP; type III secretion protein P
D VPUCM_1745 Type III secretion protein SctX K04059 yscX; type III secretion protein X
D VPUCM_1776 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D VPUCM_1748 Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) K04058 yscW; type III secretion protein W
D VPUCM_1769 Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D VPUCM_1753 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,flagellar export components) K03226 yscR; type III secretion protein R
D VPUCM_1754 Type III secretion inner membrane protein (YscS,flagellar export components) K03227 yscS; type III secretion protein S
D VPUCM_1755 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,flagellar export components) K03228 yscT; type III secretion protein T
D VPUCM_1756 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export components) K03229 yscU; type III secretion protein U
D VPUCM_1743 Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D VPUCM_1749 Flagellum-specific ATP synthase FliI K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPUCM_1752 Type III secretion inner membrane protein (YscQ, flagellar export components) K03225 yscQ; type III secretion protein Q
D VPUCM_1767 Type III secretion cytoplasmic protein (YscL) K03223 yscL; type III secretion protein L
D VPUCM_0232 hypothetical protein K02453 gspD; general secretion pathway protein D
D VPUCM_20803 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0128 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0127 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPUCM_0224 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0130 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0222 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0131 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0132 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPUCM_0133 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPUCM_0134 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPUCM_0228 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0135 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0136 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPUCM_0137 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPUCM_0129 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_p0106 Type IV fimbrial assembly, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_20467 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_0576 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_20468 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_0577 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_3013 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPUCM_0677 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPUCM_0302 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPUCM_0575 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPUCM_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPUCM_0458 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPUCM_3041 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VPUCM_2929 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPUCM_2620 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPUCM_0094 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPUCM_0095 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPUCM_0096 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VPUCM_20933 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPUCM_20934 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D VPUCM_20946 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPUCM_20947 Flagellar motor rotation protein MotB K11892 impK; type VI secretion system protein ImpK
D VPUCM_20935 ClpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vph02020]
D VPUCM_0557 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPUCM_0556 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VPUCM_20979 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2251 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_1956 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPUCM_21292 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_0558 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_21040 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_0150 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPUCM_0149 Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VPUCM_2957 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPUCM_20141 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_2956 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_20419 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPUCM_20420 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D VPUCM_0428 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPUCM_0382 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPUCM_0381 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPUCM_21158 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPUCM_21159 Cobalt-zinc-cadmium resistance protein CzcA K07787 cusA; copper/silver efflux system protein
D VPUCM_1816 Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPUCM_1815 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPUCM_2346 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2347 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2348 Flagellin protein FlaF K02406 fliC; flagellin
D VPUCM_0176 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_21376 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2435 Flagellin protein FlaE K02406 fliC; flagellin
D VPUCM_2436 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2437 Flagellin protein FlaC K02406 fliC; flagellin
D VPUCM_21383 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2320 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_21384 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_2533 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_21266 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPUCM_20621 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPUCM_2177 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VPUCM_2054 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPUCM_2053 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPUCM_2178 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPUCM_0479 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPUCM_0481 Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VPUCM_1734 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VPUCM_1733 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VPUCM_1732 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VPUCM_21098 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPUCM_0009 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPUCM_20624 DNA-binding response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D VPUCM_20664 Transcriptional regulatory protein CitB, DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D VPUCM_20866 C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VPUCM_1960 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VPUCM_1311 DNA-binding response regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPUCM_20481 Nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPUCM_20482 Nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VPUCM_2938 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VPUCM_2939 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VPUCM_2940 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VPUCM_2941 Fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VPUCM_20851 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPUCM_20727 Phosphoglycerate transporter protein PgtP K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPUCM_20850 Sensor histidine protein kinase UhpB, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPUCM_20849 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VPUCM_20848 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VPUCM_2653 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPUCM_1272 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPUCM_2633 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPUCM_20914 Sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPUCM_20909 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPUCM_20912 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPUCM_21333 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21337 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21336 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21335 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D VPUCM_21334 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D VPUCM_0820 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPUCM_0822 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D VPUCM_0823 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D VPUCM_0828 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPUCM_0829 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPUCM_0830 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPUCM_0831 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D VPUCM_0917 [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VPUCM_0938 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VPUCM_0113 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPUCM_0112 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_0770 Flagellar regulatory protein FleQ K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20728 Phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D VPUCM_20729 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPUCM_20730 Phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VPUCM_1016 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_21535 Signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_20178 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPUCM_1015 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPUCM_2770 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPUCM_2609 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPUCM_2451 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPUCM_2247 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1168 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2030 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20489 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21280 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21293 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0416 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21322 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1314 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1324 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2924 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21473 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20743 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1530 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20022 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20885 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1704 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21031 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0184 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21081 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21089 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1077 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2711 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21128 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21148 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21047 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPUCM_20495 Methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPUCM_2313 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_2314 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_2317 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPUCM_1546 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2319 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2316 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPUCM_2452 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20905 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_21202 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2110 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20455 Autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPUCM_20456 Autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPUCM_20920 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPUCM_1252 Autoinducer 1 sensor kinase/phosphatase LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPUCM_1118 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPUCM_1514 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_1117 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_2602 Quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPUCM_1011 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VPUCM_1012 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VPUCM_1013 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VPUCM_2083 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2015 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2082 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPUCM_2014 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPUCM_2086 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPUCM_2084 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPUCM_2085 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPUCM_2341 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPUCM_2340 Flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VPUCM_2339 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21366 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_1256 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2892 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2705 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VPUCM_0433 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VPUCM_0434 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPUCM_0435 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPUCM_20534 hypothetical protein K08738 CYC; cytochrome c
D VPUCM_1645 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VPUCM_1644 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VPUCM_1643 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VPUCM_1642 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VPUCM_2158 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPUCM_20541 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPUCM_2157 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPUCM_20540 putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_2136 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VPUCM_20008 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPUCM_2454 Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPUCM_20253 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vph04148]
D VPUCM_21457 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VPUCM_0433 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vph02024]
D VPUCM_2623 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPUCM_20455 Autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPUCM_20456 Autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPUCM_1253 N-(3-hydroxybutanoyl)-L-homoserine lactone synthase LuxM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VPUCM_1252 Autoinducer 1 sensor kinase/phosphatase LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPUCM_20919 8-amino-7-oxononanoate synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPUCM_20920 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPUCM_1118 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPUCM_1514 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_1117 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_2913 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPUCM_2602 Quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPUCM_2864 Transcriptional regulator, PadR family K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPUCM_1262 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VPUCM_1261 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VPUCM_0255 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D VPUCM_20493 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_1693 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_0534 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VPUCM_1816 Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPUCM_1815 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPUCM_21266 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPUCM_1828 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VPUCM_0607 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D VPUCM_0609 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D VPUCM_1891 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPUCM_20338 Ferric iron ABC transporter, iron-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPUCM_1886 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPUCM_20335 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPUCM_1887 Spermidine Putrescine ABC transporter permease component PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPUCM_20336 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPUCM_1888 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPUCM_20334 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPUCM_20529 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPUCM_20527 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPUCM_20528 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPUCM_20525 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPUCM_20530 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPUCM_0372 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0971 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1255 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20526 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1256 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2892 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2832 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPUCM_1297 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_20006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VPUCM_2543 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VPUCM_1878 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1125 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_21544 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1879 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1126 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1880 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1127 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1881 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_1128 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_21325 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1882 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1129 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_0046 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPUCM_2569 (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPUCM_0047 Peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPUCM_2570 (GlcNAc)2 ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPUCM_0048 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPUCM_2571 (GlcNAc)2 ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPUCM_0045 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_20004 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_2572 (GlcNAc)2 ABC transporter, ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_0168 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_2573 (GlcNAc)2 ABC transporter, ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_0169 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_20003 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPUCM_20220 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPUCM_3013 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPUCM_0677 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPUCM_0302 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPUCM_0575 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPUCM_0458 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPUCM_3041 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VPUCM_2929 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPUCM_2620 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vph05111]
D VPUCM_2623 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPUCM_20456 Autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPUCM_20455 Autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPUCM_20919 8-amino-7-oxononanoate synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPUCM_20920 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPUCM_1118 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPUCM_1514 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_1117 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_2913 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPUCM_2864 Transcriptional regulator, PadR family K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPUCM_2271 Cyn operon transcriptional activator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VPUCM_21278 Transcriptional regulator VpsT K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VPUCM_0505 Transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VPUCM_0198 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_2931 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPUCM_21237 Capsular polysaccharide synthesis enzyme CpsA, sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VPUCM_21238 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VPUCM_21239 Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPUCM_21240 Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPUCM_21247 hypothetical protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D VPUCM_0127 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPUCM_0232 hypothetical protein K02453 gspD; general secretion pathway protein D
D VPUCM_20803 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0128 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0129 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_p0106 Type IV fimbrial assembly, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_0224 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0130 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0222 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0131 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0132 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPUCM_0133 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPUCM_0134 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPUCM_0228 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0135 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0136 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPUCM_0137 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPUCM_0138 General secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VPUCM_2403 Transcriptional activator ToxR K10921 toxR; cholera toxin transcriptional activator
D VPUCM_2404 Transmembrane regulatory protein ToxS K10922 toxS; transmembrane regulatory protein ToxS
D VPUCM_0670 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPUCM_20641 Accessory colonization factor AcfA K10936 acfA; accessory colonization factor AcfA
D VPUCM_2602 Quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPUCM_20654 Vibriolysin, extracellular zinc protease Pseudolysin, extracellular zinc protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VPUCM_2653 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPUCM_1272 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPUCM_2633 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21488 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2117 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_3071 Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VPUCM_1256 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2892 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2982 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPUCM_1140 GGDEF family protein K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D VPUCM_20062 Transcriptional regulator CdgA K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D VPUCM_1054 GGDEF domain protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D VPUCM_1572 GGDEF family protein K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D VPUCM_20775 GGDEF family protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_3056 putative signal transduction protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_3063 Sensory box/GGDEF family protein K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_0690 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_20589 putative signal transduction protein K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_2803 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VPUCM_20904 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPUCM_2799 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPUCM_2796 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VPUCM_2341 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPUCM_2770 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPUCM_2640 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VPUCM_2340 Flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VPUCM_2339 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21366 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21383 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2320 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vph02030]
D VPUCM_2247 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1168 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2030 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20489 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21280 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21293 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0416 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21322 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1314 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1324 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2924 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21473 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20743 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1530 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20022 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20885 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1704 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21031 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0184 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21081 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21089 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1077 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2711 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21128 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21148 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21047 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPUCM_20495 Methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPUCM_21235 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPUCM_20593 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPUCM_2317 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPUCM_2313 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_2314 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_1546 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2319 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2318 Chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VPUCM_2833 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VPUCM_2316 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPUCM_2452 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20905 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_21202 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2110 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2451 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPUCM_21363 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_2336 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_2330 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPUCM_21369 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2329 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_21384 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_2533 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_21385 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2532 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vph02040]
D VPUCM_21365 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPUCM_2338 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPUCM_21364 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_2337 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_21363 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_2336 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_21362 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_2335 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_21361 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_2334 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_2333 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VPUCM_21381 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPUCM_2332 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPUCM_21382 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_3035 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_2331 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_2330 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPUCM_21369 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2329 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2328 Flagellar biosynthesis protein FliQ K02418 fliO; flagellar protein FliO/FliZ
D VPUCM_21370 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_2327 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_21371 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_2326 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_21372 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_2325 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_21374 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_2323 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_21373 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_2324 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_2453 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPUCM_20254 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPUCM_2450 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPUCM_20255 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPUCM_2449 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPUCM_20256 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPUCM_2448 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPUCM_20257 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPUCM_2447 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPUCM_20258 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPUCM_20259 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPUCM_2445 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPUCM_20260 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPUCM_2444 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPUCM_20261 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPUCM_2443 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPUCM_20262 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPUCM_2442 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPUCM_20263 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPUCM_2441 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPUCM_20264 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPUCM_2440 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPUCM_20265 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPUCM_2439 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPUCM_2457 Flagellar protein FlgO K24344 flgO; flagellar H-ring protein FlgO
D VPUCM_2456 Flagellar protein FlgP K09860 flgP; outer membrane protein FlgP
D VPUCM_2459 Flagellar protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D VPUCM_2907 Sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPUCM_2216 Sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPUCM_21367 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VPUCM_2346 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2347 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2348 Flagellin protein FlaF K02406 fliC; flagellin
D VPUCM_0176 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_21376 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2435 Flagellin protein FlaE K02406 fliC; flagellin
D VPUCM_2436 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2437 Flagellin protein FlaC K02406 fliC; flagellin
D VPUCM_2344 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPUCM_21378 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPUCM_21379 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VPUCM_2342 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VPUCM_21384 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_2533 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_21385 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2532 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2454 Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPUCM_20253 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPUCM_2455 Flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPUCM_20252 LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPUCM_0398 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VPUCM_2341 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPUCM_2770 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPUCM_2339 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21366 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21383 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2320 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D VPUCM_2821 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vph01501]
D VPUCM_0670 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPUCM_0882 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VPUCM_0533 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VPUCM_1878 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1125 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_21544 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1879 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1126 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1880 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1127 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1881 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_1128 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_21325 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1882 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1129 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_0040 Transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VPUCM_20487 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1169 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0039 putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1041 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1170 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0038 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPUCM_21168 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPUCM_20488 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_2854 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPUCM_2500 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPUCM_0445 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPUCM_21162 Beta-lactamase K19217 blaCARB-17; beta-lactamase class A CARB-17 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:vph01502]
D VPUCM_20791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPUCM_2837 Alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_20886 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_0447 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VPUCM_0448 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPUCM_0451 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vph01503]
D VPUCM_20416 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPUCM_2044 Peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPUCM_2045 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VPUCM_2046 Peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VPUCM_2047 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPUCM_2048 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VPUCM_2957 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPUCM_20141 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_2956 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_2916 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPUCM_21302 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPUCM_0428 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPUCM_3136 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPUCM_20424 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPUCM_0883 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPUCM_20487 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1169 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0039 putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1041 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1170 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0038 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPUCM_21168 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPUCM_20488 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_0931 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vph01000]
C 01001 Protein kinases [BR:vph01001]
D VPUCM_0054 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VPUCM_20955 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VPUCM_21240 Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPUCM_0557 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPUCM_0150 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPUCM_20419 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPUCM_2957 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPUCM_0382 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPUCM_1816 Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPUCM_20621 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPUCM_0479 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPUCM_20481 Nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPUCM_20850 Sensor histidine protein kinase UhpB, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPUCM_2653 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPUCM_20914 Sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPUCM_1310 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VPUCM_1792 Sensor kinase CitA, DpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VPUCM_0527 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VPUCM_0113 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPUCM_20729 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPUCM_1016 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_21535 Signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_1599 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VPUCM_2317 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPUCM_20456 Autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPUCM_20920 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPUCM_1252 Autoinducer 1 sensor kinase/phosphatase LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPUCM_2083 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2015 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2340 Flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VPUCM_20008 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPUCM_2568 Chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vph01009]
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPUCM_0812 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vph01002]
D VPUCM_0523 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VPUCM_2612 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPUCM_21056 Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D VPUCM_0601 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VPUCM_1529 Cell wall-associated hydrolase K13695 nlpC; probable lipoprotein NlpC
D VPUCM_2274 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VPUCM_0474 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0476 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VPUCM_0379 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VPUCM_2397 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VPUCM_0875 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VPUCM_21302 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPUCM_1302 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VPUCM_1681 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VPUCM_0067 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VPUCM_1909 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D VPUCM_20654 Vibriolysin, extracellular zinc protease Pseudolysin, extracellular zinc protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VPUCM_1884 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPUCM_21180 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPUCM_21472 Zinc protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VPUCM_2626 Protease, insulinase family/protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VPUCM_2735 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VPUCM_0588 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VPUCM_21433 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D VPUCM_2355 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VPUCM_20485 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VPUCM_1877 Peptidase, M20A family K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VPUCM_2551 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VPUCM_21123 Cell wall endopeptidase, family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPUCM_0918 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VPUCM_1883 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VPUCM_3100 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VPUCM_1825 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VPUCM_0674 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VPUCM_1196 putative protease htpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VPUCM_0784 Peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VPUCM_0717 Peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VPUCM_2364 Exported zinc metalloprotease YfgC precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VPUCM_0926 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VPUCM_0551 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VPUCM_1113 hypothetical protein K21429 impA; immunomodulating metalloprotease
D VPUCM_0428 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPUCM_0427 Outer membrane stress sensor protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VPUCM_20220 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPUCM_21171 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPUCM_21326 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPUCM_21298 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VPUCM_20161 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VPUCM_21418 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_20398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_2503 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_0669 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VPUCM_1018 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VPUCM_1020 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VPUCM_1672 Putative protease La K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VPUCM_3031 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VPUCM_0704 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VPUCM_p0013 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VPUCM_2659 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VPUCM_1683 Tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VPUCM_2240 Protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D VPUCM_2105 putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VPUCM_3036 GlpG protein (membrane protein of glp regulon) K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VPUCM_0276 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VPUCM_2882 Isoaspartyl aminopeptidase Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VPUCM_3091 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPUCM_21490 Putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VPUCM_0554 Putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VPUCM_0688 Putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VPUCM_0689 FPutative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VPUCM_2776 TldE protein, part of TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D VPUCM_20133 TldE protein, part of TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D VPUCM_2785 TldD protein, part of TldE/TldD proteolytic complex K03568 tldD; TldD protein
D VPUCM_20132 TldD protein, part of TldE/TldD proteolytic complex K03568 tldD; TldD protein
D VPUCM_2910 HflC protein K04087 hflC; modulator of FtsH protease HflC
D VPUCM_2911 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vph01003]
D VPUCM_2184 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPUCM_2418 Cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VPUCM_21439 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPUCM_2587 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPUCM_2854 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPUCM_0216 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0234 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vph01005]
D VPUCM_0931 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VPUCM_0932 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VPUCM_0456 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VPUCM_0929 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VPUCM_1225 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VPUCM_1096 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VPUCM_0181 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_1826 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_2596 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VPUCM_0210 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VPUCM_1105 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VPUCM_0208 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VPUCM_20416 putative membrane-associated metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VPUCM_0196 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VPUCM_0248 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPUCM_2476 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VPUCM_0249 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPUCM_1098 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VPUCM_0250 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPUCM_2766 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VPUCM_0193 Lipopolysaccharide biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VPUCM_0209 ADP-heptose--lipooligosaccharide heptosyltransferase, putative K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VPUCM_0194 Lipopolysaccharide heptosyltransferase I K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D VPUCM_0952 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VPUCM_2514 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VPUCM_0418 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VPUCM_0211 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VPUCM_0255 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D VPUCM_0216 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VPUCM_0234 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vph01011]
D VPUCM_2758 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VPUCM_3017 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPUCM_0452 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VPUCM_0449 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPUCM_0446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPUCM_20791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPUCM_2837 Alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_20886 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VPUCM_3022 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VPUCM_0448 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VPUCM_0451 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VPUCM_0407 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0369 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VPUCM_0520 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D VPUCM_2854 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VPUCM_2587 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VPUCM_2500 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VPUCM_0445 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPUCM_21418 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_20398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_2503 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPUCM_0669 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VPUCM_21439 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPUCM_21302 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VPUCM_1302 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VPUCM_0551 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VPUCM_21123 Cell wall endopeptidase, family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPUCM_0539 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VPUCM_0870 Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VPUCM_0977 Membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VPUCM_2710 Membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VPUCM_0941 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VPUCM_2557 Transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VPUCM_2121 protein YceG like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VPUCM_2502 Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VPUCM_2916 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPUCM_2607 N-acetylmuramoyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPUCM_21300 Outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vph01004]
D VPUCM_2126 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPUCM_20856 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPUCM_2127 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VPUCM_0985 3-oxoacyl-[ACP] synthase FabV like protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_2283 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VPUCM_0982 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_2123 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VPUCM_21016 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20561 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_20387 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_0983 3-oxoacyl-[ACP] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_2125 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPUCM_1673 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VPUCM_0930 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VPUCM_20776 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_1986 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPUCM_20777 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VPUCM_1049 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VPUCM_1249 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VPUCM_20651 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VPUCM_2976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPUCM_1723 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPUCM_21067 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_20520 Acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPUCM_0372 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0971 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1255 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20526 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_3032 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VPUCM_2128 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VPUCM_0404 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VPUCM_2757 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:vph01006]
D VPUCM_2535 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VPUCM_0349 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VPUCM_0923 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VPUCM_2914 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VPUCM_0274 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VPUCM_3033 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VPUCM_21011 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21097 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:vph01007]
D VPUCM_2462 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPUCM_2392 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VPUCM_2591 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VPUCM_2558 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_20352 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_1174 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPUCM_2901 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPUCM_1227 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPUCM_0963 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPUCM_2141 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPUCM_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPUCM_2737 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPUCM_2495 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPUCM_0504 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPUCM_2163 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPUCM_1323 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPUCM_0593 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPUCM_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPUCM_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPUCM_1186 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPUCM_0905 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPUCM_1938 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPUCM_2635 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_0597 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_1847 Ser-tRNA(Ala) deacylase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_1927 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPUCM_1926 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPUCM_20830 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VPUCM_0017 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VPUCM_1028 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VPUCM_1318 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPUCM_1217 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPUCM_21339 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VPUCM_1192 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VPUCM_2896 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VPUCM_1852 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPUCM_1276 Diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPUCM_1802 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VPUCM_1190 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VPUCM_2563 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VPUCM_3142 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPUCM_20228 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VPUCM_2817 Serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VPUCM_1971 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vph00194]
D VPUCM_3150 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VPUCM_3151 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VPUCM_3152 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VPUCM_3153 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VPUCM_3154 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VPUCM_3155 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VPUCM_3156 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VPUCM_3157 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPUCM_3158 ATP synthase protein I2 K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vph03000]
D VPUCM_p0001 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPUCM_1779 Type III secretion thermoregulatory protein (LcrF,VirF,transcription regulation of virulence plasmid) K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D VPUCM_0957 DNA-binding response regulator, AraC family K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D VPUCM_20380 Transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D VPUCM_20039 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPUCM_2530 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VPUCM_0625 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VPUCM_0637 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VPUCM_0034 HTH-type transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VPUCM_1245 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VPUCM_0517 Transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VPUCM_2855 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPUCM_0568 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPUCM_21184 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPUCM_2677 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VPUCM_0371 putative transcriptional activator for leuABCD operon K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VPUCM_2271 Cyn operon transcriptional activator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VPUCM_1179 Cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VPUCM_21509 Transcriptional regulator, LysR family K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VPUCM_20035 Transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VPUCM_0853 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VPUCM_20595 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VPUCM_0847 Galactose operon repressor, GalR-LacI family of transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VPUCM_0278 Transcriptional (co)regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VPUCM_20717 Fructose repressor FruR, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VPUCM_2513 Trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VPUCM_2179 Purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VPUCM_0055 Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VPUCM_0839 Evolved beta-D-galactosidase transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D VPUCM_1941 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VPUCM_2143 Transcriptional regulator for fatty acid degradation FadR, GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VPUCM_2606 Transcriptional repressor for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VPUCM_20440 putative transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VPUCM_20563 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D VPUCM_0040 Transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VPUCM_0182 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VPUCM_2602 Quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPUCM_21249 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VPUCM_20959 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VPUCM_3027 Unsaturated fatty acid biosynthesis repressor FabR, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VPUCM_0068 Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VPUCM_21522 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_1182 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_20462 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_20085 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_1047 Putative HTH-type transcriptional regulator ybaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VPUCM_2813 Transcriptional regulator, LuxR family K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VPUCM_20342 Transcriptional regulator VpsT K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VPUCM_21278 Transcriptional regulator VpsT K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VPUCM_21444 Transcriptional activator of maltose regulon, MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VPUCM_1068 hypothetical protein K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator
D VPUCM_20457 Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VPUCM_21498 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VPUCM_20607 HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VPUCM_2991 HTH-type transcriptional regulator zntR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VPUCM_20318 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VPUCM_21304 Transcriptional regulator, MerR family, associated with photolyase K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
D VPUCM_2391 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VPUCM_2832 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPUCM_20070 Transcriptional regulator KdgR, KDG operon repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D VPUCM_1256 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_2892 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VPUCM_1637 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VPUCM_0580 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VPUCM_2905 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D VPUCM_3055 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VPUCM_21141 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VPUCM_0518 Transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D VPUCM_2864 Transcriptional regulator, PadR family K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPUCM_21546 Sialic acid utilization regulator, RpiR family K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D VPUCM_1982 Phosphogluconate repressor HexR, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VPUCM_3016 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VPUCM_2982 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPUCM_0540 Transcriptional repressor protein TrpR K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VPUCM_20767 SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA K11925 sgrR; SgrR family transcriptional regulator
D VPUCM_1858 Putrescine utilization regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D VPUCM_2341 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPUCM_1214 putative transcription regulator TxR K18219 txr; sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
D VPUCM_0505 Transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VPUCM_1784 Sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VPUCM_2025 Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VPUCM_20110 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D VPUCM_2868 Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VPUCM_21531 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VPUCM_0886 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VPUCM_p0053 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_3159 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_21555 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_2398 Transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VPUCM_0346 Arginine pathway regulatory protein ArgR, repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D VPUCM_2395 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family K02565 nagC; N-acetylglucosamine repressor
D VPUCM_2111 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon K15545 mlc; transcriptional regulator of PTS gene
D VPUCM_0388 Mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VPUCM_20127 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D VPUCM_1339 Transcriptional repressor protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VPUCM_2989 Transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon
D VPUCM_2360 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D VPUCM_2043 Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D VPUCM_2040 Phage shock protein C K03973 pspC; phage shock protein C
D VPUCM_0387 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase operon regulatory protein DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D VPUCM_20873 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VPUCM_0174 hypothetical protein K07733 alpA; prophage regulatory protein
D VPUCM_2694 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D VPUCM_2590 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VPUCM_2544 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D VPUCM_2547 Curlin genes transcriptional activator K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vph03021]
D VPUCM_0307 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPUCM_3007 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPUCM_3006 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPUCM_0156 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VPUCM_0398 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VPUCM_2640 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VPUCM_0880 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPUCM_2664 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPUCM_2298 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPUCM_3038 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D VPUCM_2770 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VPUCM_21383 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2320 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2782 RNA polymerase associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VPUCM_0679 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VPUCM_2539 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VPUCM_3012 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VPUCM_0436 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D VPUCM_0437 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D VPUCM_20956 Serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D VPUCM_20955 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VPUCM_2663 Sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D VPUCM_2662 Sigma factor RpoE negative regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB
D VPUCM_2661 Sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D VPUCM_2590 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VPUCM_0671 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VPUCM_0147 Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VPUCM_3081 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPUCM_20093 Rho-specific inhibitor of transcription termination (YaeO) K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vph03019]
D VPUCM_2134 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPUCM_2788 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VPUCM_2658 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPUCM_2904 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPUCM_2919 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VPUCM_3083 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VPUCM_20374 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_20746 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21514 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21053 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21060 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_1005 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPUCM_21035 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPUCM_0897 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_3087 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPUCM_0684 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VPUCM_3081 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPUCM_2953 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VPUCM_0777 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0658 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_20275 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2950 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2913 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPUCM_0560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VPUCM_0565 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VPUCM_2592 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VPUCM_0510 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VPUCM_2633 Carbon storage regulator K03563 csrA; carbon storage regulator
D VPUCM_2811 MSHA biogenesis protein MshH K18765 csrD; RNase E specificity factor CsrD
D VPUCM_0483 Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D VPUCM_0273 Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D VPUCM_2750 Ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D VPUCM_2773 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
D VPUCM_1584 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VPUCM_2588 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vph03011]
D VPUCM_2103 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VPUCM_0919 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VPUCM_0288 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VPUCM_0306 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VPUCM_0299 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VPUCM_2843 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VPUCM_2873 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VPUCM_0296 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VPUCM_0432 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VPUCM_0281 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VPUCM_0305 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VPUCM_2874 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VPUCM_0304 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VPUCM_0295 SSU ribosomal protein S14p (S29e) SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D VPUCM_0683 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VPUCM_2619 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VPUCM_0291 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VPUCM_2841 SSU ribosomal protein S18p SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D VPUCM_0286 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VPUCM_0519 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VPUCM_0401 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VPUCM_3010 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D VPUCM_0285 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VPUCM_0282 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VPUCM_0283 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VPUCM_0294 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VPUCM_0297 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VPUCM_2840 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VPUCM_3009 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D VPUCM_3011 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D VPUCM_3008 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D VPUCM_0431 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VPUCM_0292 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VPUCM_0301 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VPUCM_0289 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VPUCM_0308 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VPUCM_0298 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VPUCM_2616 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VPUCM_1935 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VPUCM_0350 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VPUCM_0287 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VPUCM_0284 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VPUCM_0293 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VPUCM_0351 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VPUCM_0186 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VPUCM_0290 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VPUCM_0300 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VPUCM_0907 LSU ribosomal protein L31p LSU ribosomal protein L31p, zinc-independent K02909 RP-L31; large subunit ribosomal protein L31
D VPUCM_0280 LSU ribosomal protein L31p LSU ribosomal protein L31p, zinc-dependent K02909 RP-L31; large subunit ribosomal protein L31
D VPUCM_2129 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VPUCM_0187 LSU ribosomal protein L33p LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D VPUCM_0005 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VPUCM_1936 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VPUCM_0303 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VPUCM_2007 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VPUCM_3179 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_21563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3247 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3168 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3274 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3245 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3163 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3251 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3258 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3292 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3276 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3175 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3282 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_21557 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3275 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3281 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3285 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3288 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_21562 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3167 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3178 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3248 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3256 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vph03009]
D VPUCM_2658 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPUCM_2919 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VPUCM_2657 GTP-binding protein Era K03595 era; GTPase
D VPUCM_0352 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D VPUCM_2590 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VPUCM_0679 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VPUCM_2539 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VPUCM_3012 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VPUCM_2002 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VPUCM_0358 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase SSU rRNA m6,m6-A1518-1519 K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VPUCM_3125 16S rRNA (cytosine(967)-C(5))-methyltransferase SSU rRNA m5C967 K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VPUCM_2567 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VPUCM_3042 16S rRNA (guanine(966)-N(2))-methyltransferase SSU rRNA m(2)G966 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VPUCM_2692 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VPUCM_1689 Ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VPUCM_3161 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VPUCM_0443 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VPUCM_0442 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VPUCM_0069 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VPUCM_2248 Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VPUCM_2903 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VPUCM_0673 Cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VPUCM_1899 Ribosomal RNA large subunit methyltransferase F K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VPUCM_0885 23S rRNA (guanine-N-2-) -methyltransferase rlmG LSU rRNA m2G1835 K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VPUCM_2499 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VPUCM_2028 Methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VPUCM_1706 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VPUCM_0066 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VPUCM_1677 23S rRNA (guanine-N-2-) -methyltransferase rlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VPUCM_2527 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D VPUCM_0590 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VPUCM_2652 23S rRNA (Uracil-5-) -methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VPUCM_20056 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_2029 Ribosomal large subunit pseudouridine synthase D K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_2779 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_1267 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VPUCM_2132 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VPUCM_0546 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VPUCM_2198 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VPUCM_2473 Ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VPUCM_0695 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VPUCM_20972 Acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VPUCM_1340 Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VPUCM_20168 Ribosomal protein S6 glutaminyl transferase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VPUCM_20659 putative ribosomal-protein-serine N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VPUCM_1086 Putative ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VPUCM_2618 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D VPUCM_2980 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VPUCM_2291 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VPUCM_2134 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VPUCM_2788 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VPUCM_2695 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VPUCM_0314 ATP-dependent 23S rRNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VPUCM_21035 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VPUCM_0496 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D VPUCM_21451 putative GTPase EngC - like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPUCM_2920 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPUCM_0596 GTP-binding protein EngA K03977 engA; GTPase
D VPUCM_20918 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D VPUCM_2912 GTP-binding protein HflX K03665 hflX; GTPase
D VPUCM_3115 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VPUCM_0155 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VPUCM_0681 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VPUCM_0678 transcription termination protein NusA-like protein K09748 rimP; ribosome maturation factor RimP
D VPUCM_20720 hypothetical protein K14761 rlbA; ribosome-associated protein
D VPUCM_2498 Iojap protein K09710 ybeB; ribosome-associated protein
D VPUCM_2491 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor
D VPUCM_0672 RNA binding protein K07574 yhbY; RNA-binding protein
D VPUCM_20136 hypothetical protein K14762 yibL; ribosome-associated protein
D VPUCM_2777 Putative alpha helix protein K09889 yjgA; ribosome-associated protein
D VPUCM_2771 Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D VPUCM_0543 Ribosome hibernation protein YfiA K05809 raiA; ribosome-associated inhibitor A
D VPUCM_2486 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D VPUCM_2130 hypothetical protein, clustered with ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vph03016]
D VPUCM_0408 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VPUCM_2462 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPUCM_0905 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VPUCM_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VPUCM_2495 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPUCM_2141 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VPUCM_2392 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VPUCM_0963 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPUCM_0504 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VPUCM_2163 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPUCM_2635 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_0597 putative metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_1847 Ser-tRNA(Ala) deacylase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VPUCM_1323 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VPUCM_1938 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VPUCM_1186 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VPUCM_1227 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VPUCM_2737 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VPUCM_0593 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VPUCM_1927 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VPUCM_1926 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPUCM_2558 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_20352 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_1174 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPUCM_2901 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VPUCM_0121 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VPUCM_1078 YcfF/hinT protein: a purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VPUCM_2707 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VPUCM_0906 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VPUCM_2279 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VPUCM_0682 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VPUCM_2644 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VPUCM_0581 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPUCM_3115 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VPUCM_2914 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VPUCM_0002 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VPUCM_3162 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VPUCM_0139 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VPUCM_0004 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VPUCM_2217 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VPUCM_0179 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VPUCM_21036 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VPUCM_0972 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VPUCM_0538 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VPUCM_0020 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VPUCM_0019 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VPUCM_2591 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VPUCM_2474 Cys-tRNA(Pro) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VPUCM_2679 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VPUCM_20665 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VPUCM_0666 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VPUCM_2831 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VPUCM_2981 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VPUCM_2148 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VPUCM_2489 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VPUCM_2166 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VPUCM_2167 tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VPUCM_2175 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VPUCM_3025 tRNA (uracil(54)-C5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VPUCM_2617 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VPUCM_0154 tRNA (guanosine(18)-2'-O)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D VPUCM_0579 tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VPUCM_2959 tRNA (cytidine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VPUCM_0497 tRNA (adenine37-N(6))-methyltransferase TrmN6 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VPUCM_20134 protein of unknown function DUF358 K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D VPUCM_1070 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D VPUCM_0915 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VPUCM_20056 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_2029 Ribosomal large subunit pseudouridine synthase D K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_2779 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPUCM_1207 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VPUCM_1635 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VPUCM_0024 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VPUCM_2875 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VPUCM_2876 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VPUCM_2877 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VPUCM_1702 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VPUCM_0583 Iron binding protein IscA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D VPUCM_2667 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D VPUCM_1177 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VPUCM_2284 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VPUCM_0573 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VPUCM_1717 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VPUCM_1326 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VPUCM_1718 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VPUCM_2521 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VPUCM_2918 Epoxyqueuosine (oQ) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VPUCM_0574 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VPUCM_2531 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VPUCM_0936 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VPUCM_21554 putative P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VPUCM_0967 Inactive metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VPUCM_0402 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VPUCM_2917 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VPUCM_0871 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VPUCM_2904 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPUCM_0684 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vph03012]
D VPUCM_20793 Translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1
D VPUCM_0680 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VPUCM_1937 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VPUCM_2887 Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VPUCM_0920 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D VPUCM_3014 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_2871 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_20312 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D VPUCM_0815 Translation elongation factor G K02355 fusA; elongation factor G
D VPUCM_2872 Translation elongation factor G K02355 fusA; elongation factor G
D VPUCM_2480 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VPUCM_0922 Ribosome recycling factor K02838 frr; ribosome recycling factor
D VPUCM_2479 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VPUCM_2485 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VPUCM_2192 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D VPUCM_2943 Translation elongation factor P K02356 efp; elongation factor P
D VPUCM_1269 Translation elongation factor P-related protein K02356 efp; elongation factor P
D VPUCM_2936 Translation elongation factor P Lys34:lysine transferase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VPUCM_2944 Lysyl-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VPUCM_2287 Putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VPUCM_0503 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D VPUCM_0803 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D VPUCM_20490 Hypothetical protein YaeJ K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:vph03110]
D VPUCM_2194 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VPUCM_0781 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VPUCM_0548 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VPUCM_0714 ATP-dependent Clp protease ATP-binding subunit ClpA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D VPUCM_1019 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VPUCM_0275 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPUCM_0777 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0658 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0585 Chaperone protein HscA K04044 hscA; molecular chaperone HscA
D VPUCM_20988 Putative heat shock protein YegD K04046 yegD; hypothetical chaperone protein
D VPUCM_20275 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2950 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_0659 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VPUCM_0782 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D VPUCM_0362 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D VPUCM_0584 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VPUCM_0125 33 kDa chaperonin (Heat shock protein 33) (HSP33) K04083 hslO; molecular chaperone Hsp33
D VPUCM_0776 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPUCM_0655 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPUCM_0779 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D VPUCM_0713 Small HspC2 heat shock protein K13993 HSP20; HSP20 family protein
D VPUCM_0772 Heat shock protein, HSP20 family K13993 HSP20; HSP20 family protein
D VPUCM_0773 Heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D VPUCM_0016 16 kDa heat shock protein B K04080 ibpA; molecular chaperone IbpA
D VPUCM_0126 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit K04762 hslR; ribosome-associated heat shock protein Hsp15
D VPUCM_20274 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPUCM_2951 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPUCM_0428 Outer membrane stress sensor protease DegQ, serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D VPUCM_0674 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VPUCM_3157 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPUCM_21335 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D VPUCM_2929 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPUCM_2955 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein K06006 cpxP; periplasmic protein CpxP/Spy
D VPUCM_21449 Copper metallochaperone, Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D VPUCM_20987 Copper metallochaperone, Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D VPUCM_2178 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPUCM_1581 Putative oxidoreductase component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D VPUCM_20220 Alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPUCM_2469 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_2576 Beta-N-acetylhexosaminidase, (GlcNAc)2 catabolism K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPUCM_0883 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPUCM_1226 Peptidyl-prolyl cis-trans isomerase PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VPUCM_20021 Peptidyl-prolyl cis-trans isomerase PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VPUCM_1022 Peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VPUCM_2879 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VPUCM_0310 FKBP-type peptidyl-prolyl cis-trans isomerase FklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VPUCM_0524 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D VPUCM_2883 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VPUCM_21200 Peptidyl-prolyl cis-trans isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VPUCM_0360 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VPUCM_3082 Thioredoxin K03671 TXN; thioredoxin
D VPUCM_20857 Thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VPUCM_2414 Thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
D VPUCM_1984 Glutaredoxin 1 K03674 grxA; glutaredoxin 1
D VPUCM_20370 Glutaredoxin 2 K03675 grxB; glutaredoxin 2
D VPUCM_2220 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VPUCM_3136 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPUCM_20424 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPUCM_2146 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D VPUCM_0501 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPUCM_0742 Thiol:disulfide involved in conjugative transfer K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPUCM_2963 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VPUCM_1294 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D VPUCM_2305 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vph04131]
D VPUCM_0589 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VPUCM_0022 putative transmembrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VPUCM_20446 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2245 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_0377 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_2112 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_20726 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vph04121]
C 03051 Proteasome [BR:vph03051]
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vph03032]
D VPUCM_0944 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VPUCM_p0001 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPUCM_2996 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPUCM_1021 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPUCM_1924 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPUCM_2102 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPUCM_0009 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPUCM_2838 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VPUCM_0399 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0934 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPUCM_0010 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPUCM_2736 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPUCM_2497 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPUCM_2119 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPUCM_0720 DNA polymerase III, epsilon subunit-like protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20068 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1315 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20695 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0846 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0945 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1805 DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2975 3'-5' exonuclease domain epsilon subunit of DNA polymerase III, PA3232-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2266 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPUCM_0694 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VPUCM_0933 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPUCM_2845 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPUCM_2386 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VPUCM_1286 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VPUCM_0012 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VPUCM_0426 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPUCM_0425 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPUCM_2186 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VPUCM_p0057 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D VPUCM_2237 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vph03036]
D VPUCM_p0001 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPUCM_2658 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VPUCM_1210 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VPUCM_2996 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPUCM_1021 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPUCM_1924 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPUCM_2102 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPUCM_0782 DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D VPUCM_0783 Chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D VPUCM_0009 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VPUCM_0439 Phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VPUCM_21080 Non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D VPUCM_21186 Non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D VPUCM_2982 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPUCM_2913 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VPUCM_2677 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VPUCM_21522 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_1182 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_20462 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_20085 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPUCM_2231 Nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D VPUCM_2172 Chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D VPUCM_2173 Chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D VPUCM_2174 Chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D VPUCM_0454 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VPUCM_2647 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage K05589 ftsB; cell division protein FtsB
D VPUCM_3040 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPUCM_0445 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPUCM_1183 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VPUCM_0444 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D VPUCM_0453 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VPUCM_0450 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VPUCM_3039 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPUCM_0455 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPUCM_2429 Cell division protein ZipA K03528 zipA; cell division protein ZipA
D VPUCM_2672 Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D VPUCM_0272 Putative cytoplasmic protein K09892 zapB; cell division protein ZapB
D VPUCM_1678 hypothetical protein K18657 zapC; cell division protein ZapC
D VPUCM_2614 hypothetical protein K18778 zapD; cell division protein ZapD
D VPUCM_0430 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D VPUCM_0312 Putative cell envelope opacity-associated protein A K07269 ytfB; cell division protein YtfB
D VPUCM_2916 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPUCM_20487 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1169 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0039 putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1041 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0975 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VPUCM_0974 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VPUCM_0973 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VPUCM_1954 Superfamily II DNA and RNA helicase K13053 sulA; cell division inhibitor SulA
D VPUCM_0182 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VPUCM_2386 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VPUCM_2792 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPUCM_2791 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VPUCM_2790 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VPUCM_2501 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VPUCM_20011 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VPUCM_p0052 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_3160 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_2315 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_p0053 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_3159 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_21555 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_0426 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPUCM_0425 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPUCM_3162 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VPUCM_3161 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VPUCM_3065 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D VPUCM_0500 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VPUCM_2140 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VPUCM_0102 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vph03400]
D VPUCM_20040 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VPUCM_21303 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VPUCM_0491 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VPUCM_2708 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VPUCM_2213 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VPUCM_0459 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPUCM_1399 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPUCM_1531 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPUCM_20295 Nudix-related transcriptional regulator NrtR K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPUCM_20197 deoxyribodipyrimidine photolyase - like protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VPUCM_20039 ADA regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VPUCM_2036 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VPUCM_0189 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VPUCM_2205 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VPUCM_0489 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VPUCM_0502 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VPUCM_2428 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VPUCM_0101 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VPUCM_2815 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VPUCM_1116 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VPUCM_1273 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VPUCM_3092 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VPUCM_3007 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VPUCM_3006 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VPUCM_0307 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VPUCM_0156 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VPUCM_1088 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VPUCM_2639 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VPUCM_2915 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VPUCM_0509 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VPUCM_1917 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VPUCM_0599 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VPUCM_2534 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VPUCM_0934 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VPUCM_0010 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VPUCM_2736 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VPUCM_2497 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VPUCM_2119 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPUCM_0720 DNA polymerase III, epsilon subunit-like protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20068 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1315 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_20695 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0846 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_0945 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_1805 DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2975 3'-5' exonuclease domain epsilon subunit of DNA polymerase III, PA3232-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPUCM_2266 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VPUCM_0694 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_2845 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPUCM_0865 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VPUCM_0864 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPUCM_0866 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VPUCM_2637 RecA protein K03553 recA; recombination protein RecA
D VPUCM_2160 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VPUCM_2159 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VPUCM_2162 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VPUCM_0279 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VPUCM_2842 Primosomal replication protein N K02686 priB; primosomal replication protein N
D VPUCM_2203 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D VPUCM_20930 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D VPUCM_20931 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D VPUCM_0814 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VPUCM_0011 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VPUCM_0153 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VPUCM_2656 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VPUCM_2264 Recombination protein RecR K06187 recR; recombination protein RecR
D VPUCM_0652 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VPUCM_0555 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D VPUCM_2003 ATP-dependent RNA helicase YejH K19789 radD; DNA repair protein RadD
D VPUCM_1286 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VPUCM_0012 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VPUCM_2186 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VPUCM_2996 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VPUCM_1021 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VPUCM_2982 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VPUCM_1924 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VPUCM_2102 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VPUCM_0897 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_3087 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VPUCM_1210 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VPUCM_0896 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VPUCM_p0014 Error-prone, lesion bypass DNA polymerase V (UmuC) K03502 umuC; DNA polymerase V
D VPUCM_0703 Error-prone, lesion bypass DNA polymerase V (UmuC) K03502 umuC; DNA polymerase V
D VPUCM_0704 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VPUCM_p0013 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VPUCM_3031 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VPUCM_1271 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VPUCM_2107 RecA/RadA recombinase K14160 imuA; protein ImuA
D VPUCM_2108 DNA polymerase IV-like protein ImuB K14161 imuB; protein ImuB
D VPUCM_2109 Error-prone repair-like protein of DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D VPUCM_2636 Regulatory protein RecX K03565 recX; regulatory protein
D VPUCM_0041 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VPUCM_20618 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VPUCM_0966 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VPUCM_2201 ATP-dependent helicase DinG/Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VPUCM_1284 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VPUCM_1283 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vph03029]
D VPUCM_0434 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VPUCM_0680 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VPUCM_1937 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VPUCM_0920 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D VPUCM_3014 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_2871 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_20312 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D VPUCM_0815 Translation elongation factor G K02355 fusA; elongation factor G
D VPUCM_2872 Translation elongation factor G K02355 fusA; elongation factor G
D VPUCM_2657 GTP-binding protein Era K03595 era; GTPase
D VPUCM_2558 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_20352 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPUCM_2495 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VPUCM_2163 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VPUCM_0963 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VPUCM_2526 DNA/RNA endonuclease G K01173 ENDOG; endonuclease G, mitochondrial
D VPUCM_2812 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0754 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VPUCM_0927 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VPUCM_0777 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0658 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0776 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPUCM_0655 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VPUCM_20275 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2950 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_20274 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPUCM_2951 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VPUCM_0659 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VPUCM_0581 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPUCM_0584 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VPUCM_2220 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VPUCM_2140 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VPUCM_21011 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21097 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPUCM_21104 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPUCM_21098 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D VPUCM_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPUCM_21100 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D VPUCM_21448 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vph02000]
D VPUCM_1095 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VPUCM_1564 ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_1563 Putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_21520 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_21268 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPUCM_20693 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D VPUCM_21540 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPUCM_21275 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPUCM_1969 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VPUCM_1968 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VPUCM_20217 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D VPUCM_1675 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein
D VPUCM_20824 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VPUCM_20823 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D VPUCM_20822 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPUCM_21048 Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D VPUCM_1597 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VPUCM_1596 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D VPUCM_1595 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VPUCM_20965 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPUCM_20964 Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VPUCM_20963 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPUCM_2581 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPUCM_20229 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPUCM_2580 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPUCM_20232 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPUCM_2579 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPUCM_20231 ABC transporter of unknown compound (not Fe3+), ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPUCM_0339 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VPUCM_0340 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D VPUCM_0341 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VPUCM_20351 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1627 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1628 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPUCM_1629 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D VPUCM_1630 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VPUCM_1631 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VPUCM_1891 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPUCM_20338 Ferric iron ABC transporter, iron-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPUCM_1886 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPUCM_20335 Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPUCM_1887 Spermidine Putrescine ABC transporter permease component PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPUCM_20336 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPUCM_1888 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPUCM_20334 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPUCM_20566 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPUCM_1809 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPUCM_20567 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPUCM_1808 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D VPUCM_20568 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPUCM_1807 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPUCM_20128 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPUCM_20129 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPUCM_20130 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VPUCM_2020 ABC transporter, periplasmic substrate-binding protein YnjB K05777 ynjB; putative thiamine transport system substrate-binding protein
D VPUCM_2021 ABC transporter, permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein
D VPUCM_2022 ABC transporter, ATP-binding protein YnjD K05779 ynjD; putative thiamine transport system ATP-binding protein
D VPUCM_21235 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPUCM_21234 Maltose/maltodextrin ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VPUCM_21233 Maltose/maltodextrin ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VPUCM_21236 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VPUCM_21485 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPUCM_20593 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VPUCM_20592 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VPUCM_20591 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VPUCM_2056 YbbM seven transmembrane helix protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D VPUCM_2762 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VPUCM_2763 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VPUCM_2764 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VPUCM_2761 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VPUCM_2760 Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D VPUCM_21292 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_0558 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_21040 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VPUCM_21291 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPUCM_0561 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VPUCM_21290 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPUCM_0562 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VPUCM_21289 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPUCM_0563 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPUCM_21001 Arginine ABC transporter, periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VPUCM_20999 Arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D VPUCM_21000 Arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VPUCM_21002 Arginine ABC transporter, ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_1696 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VPUCM_1697 Glutamate Aspartate transport system permease protein GltJ K09970 aapQ; general L-amino acid transport system permease protein
D VPUCM_1698 Glutamate transport membrane-spanning protein K09971 aapM; general L-amino acid transport system permease protein
D VPUCM_1699 ABC-type polar amino acid transport system, ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_1110 Lysine-arginine-ornithine-binding periplasmic protein precursor K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VPUCM_1112 Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D VPUCM_1111 Arginine/ornithine ABC transporter, permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VPUCM_1109 Arginine/ornithine ABC transporter, ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_20529 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPUCM_20527 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VPUCM_20528 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D VPUCM_20525 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPUCM_20530 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VPUCM_0397 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPUCM_2518 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VPUCM_2517 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D VPUCM_2516 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VPUCM_1136 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D VPUCM_1137 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D VPUCM_1138 Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D VPUCM_0008 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VPUCM_0007 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VPUCM_0006 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VPUCM_20007 ABC-type amino acid transport/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VPUCM_20723 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VPUCM_20722 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPUCM_20724 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPUCM_20725 Amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VPUCM_1878 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1125 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_21544 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VPUCM_1879 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1126 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VPUCM_1880 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1127 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VPUCM_1881 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_1128 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VPUCM_21325 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1882 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_1129 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VPUCM_2044 Peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VPUCM_2045 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VPUCM_2046 Peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VPUCM_2047 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VPUCM_2048 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VPUCM_0046 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPUCM_2569 (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VPUCM_0047 Peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPUCM_2570 (GlcNAc)2 ABC transporter, permease component 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VPUCM_0048 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPUCM_2571 (GlcNAc)2 ABC transporter, permease component 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VPUCM_0045 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_20004 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_2572 (GlcNAc)2 ABC transporter, ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_0168 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPUCM_2573 (GlcNAc)2 ABC transporter, ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_0169 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_20003 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPUCM_0167 ABC-type oligopeptide transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D VPUCM_2098 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D VPUCM_0165 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VPUCM_0166 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VPUCM_21477 Ferrichrome ABC transporter, periplasmic iron-binding protein PvuB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPUCM_21475 Ferrichrome ABC transporter (permease) PvuD K23182 fecD; ferric citrate transport system permease protein
D VPUCM_21476 Ferrichrome ABC transporter (permease) PvuC K23183 fecC; ferric citrate transport system permease protein
D VPUCM_21474 Ferrichrome ABC transporter (ATP binding subunit) PvuE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPUCM_21271 Ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPUCM_21272 Ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VPUCM_21270 Ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VPUCM_21211 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D VPUCM_21212 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D VPUCM_21213 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VPUCM_20603 Iron compound ABC uptake transporter substrate-binding protein PiuA K25282 yclQ; iron-siderophore transport system substrate-binding protein
D VPUCM_20605 Ferric vibriobactin, enterobactin transport system, permease protein VctG K25283 yclO; iron-siderophore transport system permease protein
D VPUCM_20604 Iron compound ABC uptake transporter permease protein PiuC K25284 yclN; iron-siderophore transport system permease protein
D VPUCM_20606 Ferric vibriobactin, enterobactin transport system, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D VPUCM_0469 Vitamin B12 ABC transporter, B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VPUCM_1907 Vitamin B12 ABC transporter, permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VPUCM_1906 Vitamin B12 ABC transporter, ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VPUCM_20156 Cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPUCM_0956 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VPUCM_20158 ABC transporter in pyoverdin gene cluster, permease component K09816 znuB; zinc transport system permease protein
D VPUCM_0954 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D VPUCM_20157 ABC transporter in pyoverdin gene cluster, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPUCM_0955 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPUCM_21312 Substrate-specific component MtsA of methionine-regulated ECF transporter K16924 mtsT; energy-coupling factor transport system substrate-specific component
D VPUCM_21314 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D VPUCM_21313 Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D VPUCM_20385 Zinc ABC transporter, periplasmic-binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D VPUCM_20386 Zinc ABC transporter, inner membrane permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D VPUCM_0237 Polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D VPUCM_0239 Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D VPUCM_0238 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D VPUCM_2734 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VPUCM_2733 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D VPUCM_2769 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VPUCM_1090 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VPUCM_1092 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VPUCM_1091 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VPUCM_2308 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE K02196 ccmD; heme exporter protein D
D VPUCM_2309 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D VPUCM_2310 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D VPUCM_2311 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VPUCM_3039 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VPUCM_3040 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPUCM_20027 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPUCM_1795 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPUCM_1796 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPUCM_2597 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPUCM_21152 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPUCM_20028 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPUCM_2598 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPUCM_21151 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPUCM_2069 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_2070 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_20779 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_0324 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_1991 AttF component of AttEFGH ABC transport system K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_20015 Lipoprotein releasing system transmembrane protein LolC K02004 ABC.CD.P; putative ABC transport system permease protein
D VPUCM_2068 Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_20778 putative ABC-type transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_21084 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_0325 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_1992 AttE component of AttEFGH ABC transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_20014 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPUCM_1544 Transporter, putative K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPUCM_2922 Transporter, putative K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPUCM_1962 Di-and tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VPUCM_0516 Sodium-dependent phosphate transporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VPUCM_1522 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM K26939 norM; MATE family, multidrug efflux pump
D VPUCM_20055 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_3029 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_1993 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_2952 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_20449 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_0687 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_20860 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_20833 Adhesin K26937 dinF; MATE family, multidrug efflux pump
D VPUCM_20646 Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VPUCM_2973 putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VPUCM_20848 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VPUCM_0857 Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VPUCM_20851 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPUCM_20727 Phosphoglycerate transporter protein PgtP K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPUCM_3052 Permease of the major facilitator superfamily K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D VPUCM_0882 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VPUCM_3098 Multidrug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VPUCM_2001 MFS family multidrug transport protein, bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VPUCM_20163 Multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VPUCM_21398 Putative transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D VPUCM_21197 Putative transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D VPUCM_20092 Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VPUCM_1903 putative efflux permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VPUCM_20858 Permease of the major facilitator superfamily K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VPUCM_2433 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VPUCM_0511 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VPUCM_2432 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VPUCM_2774 Phosphocarrier protein, nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VPUCM_20716 Fructose-specific phosphocarrier protein HPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VPUCM_0386 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D VPUCM_2434 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21488 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2117 PTS system, glucose-specific IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VPUCM_2393 PTS system, N-acetylglucosamine-specific IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VPUCM_2512 PTS system, trehalose-specific IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPUCM_21548 PTS system, N-acetylmuramic acid-specific IIB component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPUCM_20287 Phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPUCM_20714 PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPUCM_21255 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPUCM_21254 PTS system, fructose-specific IIA component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPUCM_20286 PTS system, fructose-specific IIBC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPUCM_21139 PTS system, IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPUCM_21138 PTS system, mannitol-specific IIB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPUCM_0390 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VPUCM_2719 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2721 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VPUCM_2720 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPUCM_20224 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPUCM_20223 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPUCM_20222 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPUCM_2772 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPUCM_21256 Putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPUCM_2263 Aquaporin Z K06188 aqpZ; aquaporin Z
D VPUCM_0855 Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D VPUCM_1414 hypothetical protein K10716 kch; voltage-gated potassium channel
D VPUCM_1142 Putative potassium channel protein K10716 kch; voltage-gated potassium channel
D VPUCM_0415 cAMP-dependent Kef-type K+ transport system K10716 kch; voltage-gated potassium channel
D VPUCM_2226 Potassium voltage-gated channel subfamily KQT K10716 kch; voltage-gated potassium channel
D VPUCM_21406 Potassium channel protein K10716 kch; voltage-gated potassium channel
D VPUCM_2582 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D VPUCM_1624 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D VPUCM_20995 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPUCM_21251 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPUCM_0436 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D VPUCM_20634 BatA K07114 yfbK; Ca-activated chloride channel homolog
D VPUCM_20635 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D VPUCM_21285 BatA K07114 yfbK; Ca-activated chloride channel homolog
D VPUCM_21286 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D VPUCM_1700 Putative TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D VPUCM_2058 Formate efflux transporter K06212 focA; formate transporter
D VPUCM_20752 Formate efflux transporter K06212 focA; formate transporter
D VPUCM_20870 Nitrite transporter from formate/nitrite family K21993 fdhC; formate transporter
D VPUCM_2680 Protein involved in stability of MscS mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VPUCM_2255 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VPUCM_21331 Small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D VPUCM_2775 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter
D VPUCM_20437 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter
D VPUCM_21384 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_2533 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_21385 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2532 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2907 Sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPUCM_2216 Sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPUCM_21367 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VPUCM_20145 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D VPUCM_20146 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPUCM_0161 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPUCM_0162 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D VPUCM_21209 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VPUCM_20147 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D VPUCM_0160 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D VPUCM_2154 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D VPUCM_2153 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D VPUCM_0851 Magnesium and cobalt transport protein CorA K16074 zntB; zinc transporter
D VPUCM_3107 CrcB protein K06199 crcB; fluoride exporter
D VPUCM_1004 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_2997 CBS-domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_2622 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_2200 Outer membrane protein OmpT K16076 nmpC; outer membrane porin protein LC
D VPUCM_20160 Outer membrane protein N, non-specific porin K14062 ompN; outer membrane protein N
D VPUCM_0670 Outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPUCM_21465 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) K02024 lamB; maltoporin
D VPUCM_20492 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPUCM_2461 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPUCM_20239 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPUCM_0638 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPUCM_20762 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPUCM_2300 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPUCM_2301 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPUCM_20215 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPUCM_0877 Outer membrane protein OmpK K05517 tsx; nucleoside-specific channel-forming protein
D VPUCM_21334 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D VPUCM_21478 Vibrioferrin receptor PvuA K16091 fecA; Fe(3+) dicitrate transport protein
D VPUCM_3024 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D VPUCM_2685 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VPUCM_20610 Enterobactin receptor VctA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPUCM_20787 TonB-dependent heme and hemoglobin receptor HutA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPUCM_21297 TonB-dependent heme receptor HutR K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_20143 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_0164 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_21479 Ferric siderophore receptor PsuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_21269 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_20864 Aerobactin siderophore receptor IutA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_1710 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPUCM_1713 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPUCM_20346 Outer membrane protein OprN K18300 oprN; outer membrane protein, multidrug efflux system
D VPUCM_21239 Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPUCM_0927 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VPUCM_0595 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) K17713 bamB; outer membrane protein assembly factor BamB
D VPUCM_2358 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL) K07287 bamC; outer membrane protein assembly factor BamC
D VPUCM_0545 putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) K05807 bamD; outer membrane protein assembly factor BamD
D VPUCM_0651 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex K06186 bamE; outer membrane protein assembly factor BamE
D VPUCM_0331 Uncharacterized protein YtfM precursor K07278 tamA; translocation and assembly module TamA
D VPUCM_0332 Uncharacterized protein YtfN K09800 tamB; translocation and assembly module TamB
D VPUCM_20079 Oligogalacturonate-specific porin protein KdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D VPUCM_2468 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D VPUCM_p0112 autotransporter K21449 ata; trimeric autotransporter adhesin
D VPUCM_2768 LptA, protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D VPUCM_2767 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters K11719 lptC; lipopolysaccharide export system protein LptC
D VPUCM_0361 Outer membrane protein Imp, required for envelope biogenesis K04744 lptD; LPS-assembly protein
D VPUCM_2496 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D VPUCM_2415 Cellulose synthase operon protein C K20543 bcsC; cellulose synthase operon protein C
D VPUCM_21238 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VPUCM_1738 Type III secretion host injection protein (YopB) K23475 yopB; transloator
D VPUCM_1737 Type III secretion host injection and negative regulator protein (YopD) K23476 yopD; transloator
D VPUCM_2492 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D VPUCM_1918 Antiholin-like protein LrgA K06518 cidA; holin-like protein
D VPUCM_21456 Putrescine/proton symporter, putrescine/ornithine antiporter PotE K03756 potE; putrescine:ornithine antiporter
D VPUCM_2988 Lysine/cadaverine antiporter membrane protein CadB K03757 cadB; cadaverine:lysine antiporter
D VPUCM_1828 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VPUCM_20441 Amino acid transporter K16263 yjeH; amino acid efflux transporter
D VPUCM_2954 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D VPUCM_21159 Cobalt-zinc-cadmium resistance protein CzcA K07787 cusA; copper/silver efflux system protein
D VPUCM_1170 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0038 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPUCM_21168 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPUCM_20488 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_2560 RND multidrug efflux transporter K18989 vexF; multidrug efflux pump
D VPUCM_20655 Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VPUCM_0058 Spermidine export protein MdtI K11742 mdtI; spermidine export protein MdtI
D VPUCM_0057 Spermidine export protein MdtJ K11743 mdtJ; spermidine export protein MdtJ
D VPUCM_3088 Protein rarD K05786 rarD; chloramphenicol-sensitive protein RarD
D VPUCM_20902 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VPUCM_2218 Histidine permease YuiF K07084 yuiF; putative amino acid transporter
D VPUCM_0061 Low-affinity gluconate/H+ symporter GntU K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VPUCM_20111 D-glycerate transporter (predicted) K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VPUCM_2962 C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VPUCM_20866 C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VPUCM_21328 L-lactate permease K03303 lutP; lactate permease
D VPUCM_20340 High-affinity choline uptake protein BetT K05020 opuD; glycine betaine transporter
D VPUCM_2765 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D VPUCM_21529 Proline/sodium symporter PutP, Propionate/sodium symporter K11928 putP; sodium/proline symporter
D VPUCM_2968 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D VPUCM_21452 Sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D VPUCM_1566 Sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VPUCM_20030 Sodium/glutamate symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D VPUCM_20026 Sodium/glutamate symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D VPUCM_1989 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D VPUCM_2144 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D VPUCM_2228 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D VPUCM_1211 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VPUCM_2965 Cell volume regulation protein A-like protein K11105 cvrA; potassium/hydrogen antiporter
D VPUCM_2822 Na+/H+ antiporter, putative K03316 nhaP; Na+:H+ antiporter
D VPUCM_2885 putative Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VPUCM_21175 Glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VPUCM_2886 Glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VPUCM_21174 Glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VPUCM_0774 Glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter
D VPUCM_1007 K(+)-uptake protein KtrB, integral membrane subunit K03498 trkH; trk/ktr system potassium uptake protein
D VPUCM_3127 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPUCM_0031 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPUCM_21264 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPUCM_1006 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VPUCM_3126 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VPUCM_21265 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VPUCM_20435 Cytosine permease K10974 codB; cytosine permease
D VPUCM_2370 Uracil permease K02824 uraA; uracil permease
D VPUCM_0151 Xanthine permease K16345 xanP; xanthine permease XanP
D VPUCM_2550 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VPUCM_21130 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPUCM_1559 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPUCM_20974 Serine transporter K03837 sdaC; serine transporter
D VPUCM_1330 Serine transporter K03837 sdaC; serine transporter
D VPUCM_2261 Serine transporter K26604 cyuP; cysteine uptake transport protein
D VPUCM_20512 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D VPUCM_0834 Chromate transport protein ChrA K07240 chrA; chromate transporter
D VPUCM_2135 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VPUCM_2599 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VPUCM_1011 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VPUCM_1012 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VPUCM_1013 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VPUCM_21142 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D VPUCM_20650 Anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VPUCM_0520 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D VPUCM_1172 Transporter K13936 mdcF; malonate transporter and related proteins
D VPUCM_1925 membrane protein K24180 mleP; malate permease and related proteins
D VPUCM_2678 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VPUCM_3057 Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPUCM_20470 Putative threonine efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPUCM_20362 Transporter, LysE family K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPUCM_1549 putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPUCM_3090 L-lysine permease K05835 rhtC; threonine efflux protein
D VPUCM_20444 Putative threonine efflux protein K05835 rhtC; threonine efflux protein
D VPUCM_20277 Putative threonine efflux protein K05835 rhtC; threonine efflux protein
D VPUCM_20888 putative branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D VPUCM_21111 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D VPUCM_21112 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D VPUCM_20889 putative transmembrane protein K26606 azlD; branched chain amino acid efflux pump
D VPUCM_1734 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VPUCM_1733 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VPUCM_1732 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VPUCM_2362 Putative permease PerM K03548 perM; putative permease
D VPUCM_3085 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D VPUCM_21424 Multiple antibiotic resistance protein marC K05595 marC; multiple antibiotic resistance protein
D VPUCM_0450 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VPUCM_0022 putative transmembrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VPUCM_20148 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPUCM_0159 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPUCM_21208 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D VPUCM_2150 18K peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VPUCM_2152 TolA protein K03646 tolA; colicin import membrane protein
D VPUCM_2151 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins K03641 tolB; TolB protein
D VPUCM_2629 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPUCM_2630 Oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VPUCM_2631 Oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VPUCM_2079 Membrane protein, suppressor for copper-sensitivity ScsB K08344 scsB; suppressor for copper-sensitivity B
D VPUCM_1578 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VPUCM_1579 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VPUCM_1580 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D VPUCM_2053 Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPUCM_2054 Cytochrome c-type protein NapC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VPUCM_2178 Chaperone protein TorD K03533 torD; TorA specific chaperone
D VPUCM_20122 Cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPUCM_20123 Biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPUCM_2086 Tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D VPUCM_2084 Tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D VPUCM_2085 Tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPUCM_20091 Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D VPUCM_21274 Membrane-fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D VPUCM_21158 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPUCM_21537 ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE K12542 lapC; membrane fusion protein, adhesin transport system
D VPUCM_20325 Membrane fusion protein of RND family multidrug efflux pump K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPUCM_21169 putative Co/Zn/Cd efflux system membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPUCM_20348 putative efflux protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VPUCM_20487 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1169 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0039 putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1041 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_2561 Membrane-fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D VPUCM_20216 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D VPUCM_21240 Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPUCM_1507 Polysaccharide biosynthesis chain length regulator SypO K25590 epsF; protein tyrosine kinase modulator
D VPUCM_20599 Ribosyl nicotinamide transporter, PnuC-like protein K03811 pnuC; nicotinamide mononucleotide transporter
D VPUCM_0959 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D VPUCM_0960 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VPUCM_0961 Ferrous iron transport protein C K10123 feoC; putative ferrous iron transport protein C
D VPUCM_0074 Universal stress protein B K06144 uspB; universal stress protein B
D VPUCM_1293 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VPUCM_2306 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VPUCM_2948 membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D VPUCM_20305 Outer membrane protein OmpV K07274 mipA; MipA family protein
D VPUCM_1577 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vph02044]
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_21275 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPUCM_21274 Membrane-fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D VPUCM_21540 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPUCM_21537 ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE K12542 lapC; membrane fusion protein, adhesin transport system
D VPUCM_1710 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPUCM_1713 Agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPUCM_0409 General secretion pathway protein A K02450 gspA; general secretion pathway protein A
D VPUCM_0410 General secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VPUCM_0127 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VPUCM_0232 hypothetical protein K02453 gspD; general secretion pathway protein D
D VPUCM_20803 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0128 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VPUCM_0129 General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_p0106 Type IV fimbrial assembly, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VPUCM_0224 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0130 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VPUCM_0222 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0131 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VPUCM_0132 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VPUCM_0133 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VPUCM_0134 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VPUCM_0228 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0135 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VPUCM_0136 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VPUCM_0137 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VPUCM_0138 General secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VPUCM_2612 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPUCM_2609 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPUCM_2610 Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VPUCM_2611 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VPUCM_0660 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VPUCM_1831 Type IV pilus (Tfp) assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VPUCM_2853 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VPUCM_2852 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VPUCM_2851 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VPUCM_2850 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VPUCM_2849 Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VPUCM_2697 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VPUCM_2696 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VPUCM_0664 Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VPUCM_0662 Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VPUCM_0661 Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D VPUCM_2280 putative type IV pilus assembly FimV-related transmembrane protein K08086 fimV; pilus assembly protein FimV
D VPUCM_0822 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D VPUCM_0823 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D VPUCM_0828 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPUCM_0829 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPUCM_0830 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D VPUCM_0831 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D VPUCM_0820 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPUCM_20904 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPUCM_2799 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VPUCM_2796 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VPUCM_2803 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VPUCM_2801 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D VPUCM_2802 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D VPUCM_2810 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D VPUCM_2809 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D VPUCM_2808 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D VPUCM_2806 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D VPUCM_2805 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D VPUCM_2804 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D VPUCM_2795 MSHA biogenesis protein MshO K12285 mshO; MSHA biogenesis protein MshO
D VPUCM_2794 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D VPUCM_2793 MSHA biogenesis protein MshQ K12287 mshQ; MSHA biogenesis protein MshQ
D VPUCM_2700 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D VPUCM_1023 DNA uptake protein K02237 comEA; competence protein ComEA
D VPUCM_20486 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VPUCM_1094 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D VPUCM_1776 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D VPUCM_1775 Type III secretion inner membrane protein (YscD,flagellar export components) K03220 yscD; type III secretion protein D
D VPUCM_1773 Type III secretion cytoplasmic protein (YscF) K03221 yscF; type III secretion protein F
D VPUCM_1770 Type III secretion cytoplasmic protein (YscI) K04053 yscI; type III secretion protein I
D VPUCM_1769 Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D VPUCM_1768 Type III secretion cytoplasmic protein (YscK) K04054 yscK; type III secretion protein K
D VPUCM_1767 Type III secretion cytoplasmic protein (YscL) K03223 yscL; type III secretion protein L
D VPUCM_1749 Flagellum-specific ATP synthase FliI K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPUCM_1750 Type III secretion spans bacterial envelope protein (YscO) K04056 yscO; type III secretion protein O
D VPUCM_1751 Type III secretion protein (YscP) K04057 yscP; type III secretion protein P
D VPUCM_1752 Type III secretion inner membrane protein (YscQ, flagellar export components) K03225 yscQ; type III secretion protein Q
D VPUCM_1753 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,flagellar export components) K03226 yscR; type III secretion protein R
D VPUCM_1754 Type III secretion inner membrane protein (YscS,flagellar export components) K03227 yscS; type III secretion protein S
D VPUCM_1755 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,flagellar export components) K03228 yscT; type III secretion protein T
D VPUCM_1756 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export components) K03229 yscU; type III secretion protein U
D VPUCM_1743 Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D VPUCM_1748 Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) K04058 yscW; type III secretion protein W
D VPUCM_1745 Type III secretion protein SctX K04059 yscX; type III secretion protein X
D VPUCM_1777 Type III secretion chaperone protein for YopN (SycN,YscB) K04049 yscB; type III secretion protein B
D VPUCM_1772 Type III secretion spans bacterial envelope protein (YscG) K04051 yscG; type III secretion protein G
D VPUCM_1771 Type III secretion effector protein (YopR, encoded by YscH) K04052 yscH; type III secretion protein H
D VPUCM_1744 Chaperone protein YscY (Yop proteins translocation protein Y) K04060 yscY; type III secretion protein Y
D VPUCM_21374 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_2323 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_21373 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_2324 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_21364 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_2337 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_21362 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_2335 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_21361 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_2334 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_21369 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2329 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2328 Flagellar biosynthesis protein FliQ K02418 fliO; flagellar protein FliO/FliZ
D VPUCM_21370 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_2327 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_21371 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_2326 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_21372 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_2325 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_0794 IncF plasmid conjugative transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D VPUCM_0792 IncF plasmid conjugative transfer pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D VPUCM_0748 IncF plasmid conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D VPUCM_0747 IncF plasmid conjugative transfer pilus assembly protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D VPUCM_0746 IncF plasmid conjugative transfer pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D VPUCM_0745 Conjugative signal peptidase TrhF K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D VPUCM_0743 IncF plasmid conjugative transfer pilus assembly protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D VPUCM_0738 Conjugative transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D VPUCM_0737 IncF plasmid conjugative transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D VPUCM_0736 IncF plasmid conjugative transfer pilus assembly protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D VPUCM_0735 IncF plasmid conjugative transfer pilus assembly protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D VPUCM_0734 IncF plasmid conjugative transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D VPUCM_0739 Conjugative transfer protein TraA K12069 traA; conjugal transfer pilus assembly protein TraA
D VPUCM_0728 Conjugative transfer protein TraI, relaxase K12070 traI; conjugal transfer pilus assembly protein TraI
D VPUCM_0729 IncF plasmid conjugative transfer protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D VPUCM_p0064 hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD
D VPUCM_0501 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPUCM_0742 Thiol:disulfide involved in conjugative transfer K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPUCM_0793 IncF plasmid conjugative transfer pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D VPUCM_0607 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D VPUCM_0609 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D VPUCM_20946 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VPUCM_20947 Flagellar motor rotation protein MotB K11892 impK; type VI secretion system protein ImpK
D VPUCM_20948 Uncharacterized protein ImpJ/VasE K11893 impJ; type VI secretion system protein ImpJ
D VPUCM_20936 Uncharacterized protein ImpH/VasB K11895 impH; type VI secretion system protein ImpH
D VPUCM_20937 Protein ImpG/VasA K11896 impG; type VI secretion system protein ImpG
D VPUCM_20938 Uncharacterized protein ImpF K11897 impF; type VI secretion system protein ImpF
D VPUCM_20941 Uncharacterized protein ImpC K11900 impC; type VI secretion system protein ImpC
D VPUCM_20942 Uncharacterized protein ImpB K11901 impB; type VI secretion system protein ImpB
D VPUCM_20943 Uncharacterized protein ImpA K11902 impA; type VI secretion system protein ImpA
D VPUCM_20934 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D VPUCM_20933 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPUCM_20935 ClpB protein K11907 vasG; type VI secretion system protein VasG
D VPUCM_20945 Protein phosphatase ImpM K11890 impM; type VI secretion system protein ImpM
D VPUCM_20950 Uncharacterized protein ImpI/VasC K11894 impI; type VI secretion system protein ImpI
D VPUCM_20939 Protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE
D VPUCM_20940 Uncharacterized protein ImpD K11899 impD; type VI secretion system protein ImpD
D VPUCM_21335 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D VPUCM_21334 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D VPUCM_21333 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21337 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21336 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_0458 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VPUCM_2929 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D VPUCM_20467 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_0576 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPUCM_3013 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VPUCM_20468 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_0577 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPUCM_0677 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VPUCM_0302 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D VPUCM_2620 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VPUCM_3041 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VPUCM_0575 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VPUCM_0003 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPUCM_0094 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VPUCM_0095 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VPUCM_0096 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vph02042]
D VPUCM_1658 Zona occludens toxin K10954 zot; zona occludens toxin
D VPUCM_0862 Tellurite resistance protein K11041 eta; exfoliative toxin A/B
D VPUCM_1004 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_2997 CBS-domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_2622 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPUCM_3129 putative membrane protein hemolysin III - like protein K11068 hlyIII; hemolysin III
D VPUCM_20219 Thermolabile hemolysin precursor K11018 tlh; thermolabile hemolysin
D VPUCM_1884 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPUCM_21180 Microbial collagenase, secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vph02022]
D VPUCM_0557 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VPUCM_0556 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VPUCM_0150 Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPUCM_0149 Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VPUCM_20419 Sensory histidine kinase in two-component regulatory system with RstA K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPUCM_20420 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D VPUCM_2957 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VPUCM_20141 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_2956 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPUCM_0382 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPUCM_0381 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPUCM_1816 Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPUCM_1815 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPUCM_21266 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPUCM_20621 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VPUCM_2177 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VPUCM_0479 Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPUCM_0481 Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VPUCM_20624 DNA-binding response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D VPUCM_2005 Two-component system response regulator QseB K02483 K02483; two-component system, OmpR family, response regulator
D VPUCM_21487 DNA-binding response regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D VPUCM_1311 DNA-binding response regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPUCM_20481 Nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPUCM_20482 Nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VPUCM_20850 Sensor histidine protein kinase UhpB, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPUCM_20849 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VPUCM_2653 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPUCM_1272 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPUCM_20914 Sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPUCM_20909 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPUCM_20912 Putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPUCM_1310 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VPUCM_20664 Transcriptional regulatory protein CitB, DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D VPUCM_1792 Sensor kinase CitA, DpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VPUCM_1791 Transcriptional regulatory protein CitB, DpiA K02475 K02475; two-component system, CitB family, response regulator
D VPUCM_0527 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VPUCM_0526 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D VPUCM_0113 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPUCM_0112 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VPUCM_0770 Flagellar regulatory protein FleQ K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VPUCM_20729 Phosphoglycerate transport system sensor protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPUCM_20730 Phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VPUCM_1016 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_21535 Signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPUCM_20178 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPUCM_1015 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPUCM_1599 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VPUCM_2317 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPUCM_1546 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2319 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2316 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPUCM_2452 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20905 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_21202 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2110 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20456 Autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPUCM_20920 Sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VPUCM_1252 Autoinducer 1 sensor kinase/phosphatase LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPUCM_1118 Phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VPUCM_1514 Sigma-54 dependent transcriptional regulator SypG K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_1117 Regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VPUCM_2083 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2015 Tetrathionate reductase sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VPUCM_2082 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPUCM_2014 Tetrathionate reductase two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VPUCM_2340 Flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VPUCM_2339 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21366 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_20008 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D VPUCM_20967 Response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D VPUCM_2568 Chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vph02035]
D VPUCM_2317 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPUCM_2313 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_2314 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VPUCM_2833 Chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VPUCM_2451 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPUCM_2316 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VPUCM_1546 Putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2319 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VPUCM_2318 Chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VPUCM_2452 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_20905 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_21202 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2110 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPUCM_2247 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1168 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2030 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20489 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21280 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21293 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0416 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21322 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1314 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1324 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2924 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21473 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20743 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1530 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20022 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_20885 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1704 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21031 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_0184 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21081 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21089 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_1077 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_2711 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21128 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21148 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPUCM_21047 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VPUCM_20495 Methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPUCM_21362 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_2335 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPUCM_21361 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_2334 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPUCM_2333 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VPUCM_2328 Flagellar biosynthesis protein FliQ K02418 fliO; flagellar protein FliO/FliZ
D VPUCM_21370 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_2327 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPUCM_21371 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_2326 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VPUCM_21372 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_2325 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPUCM_21374 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_2323 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPUCM_21373 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_2324 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPUCM_21363 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_2336 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VPUCM_2330 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPUCM_21369 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_2329 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPUCM_21364 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_2337 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPUCM_20262 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPUCM_2442 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPUCM_2453 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPUCM_20254 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPUCM_20261 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPUCM_2443 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPUCM_21382 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_3035 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_2331 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VPUCM_21365 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPUCM_2338 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPUCM_21381 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPUCM_2332 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPUCM_2450 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPUCM_20255 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPUCM_2449 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPUCM_20256 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPUCM_2448 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPUCM_20257 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPUCM_20259 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPUCM_2445 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPUCM_20260 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPUCM_2444 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPUCM_20263 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPUCM_2441 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPUCM_2447 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPUCM_20258 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VPUCM_20264 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPUCM_2440 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VPUCM_20265 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPUCM_2439 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPUCM_2455 Flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPUCM_20252 LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D VPUCM_2459 Flagellar protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D VPUCM_2457 Flagellar protein FlgO K24344 flgO; flagellar H-ring protein FlgO
D VPUCM_2456 Flagellar protein FlgP K09860 flgP; outer membrane protein FlgP
D VPUCM_2907 Sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VPUCM_2216 Sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPUCM_21367 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VPUCM_2346 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2347 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2348 Flagellin protein FlaF K02406 fliC; flagellin
D VPUCM_0176 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_21376 Flagellin protein FlaA K02406 fliC; flagellin
D VPUCM_2435 Flagellin protein FlaE K02406 fliC; flagellin
D VPUCM_2436 Flagellin protein FlaD K02406 fliC; flagellin
D VPUCM_2437 Flagellin protein FlaC K02406 fliC; flagellin
D VPUCM_2344 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPUCM_21378 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VPUCM_21379 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VPUCM_2342 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VPUCM_21383 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_2320 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VPUCM_21384 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_2533 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VPUCM_21385 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2532 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VPUCM_2341 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VPUCM_2340 Flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VPUCM_2339 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_21366 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D VPUCM_2454 Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPUCM_20253 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPUCM_2345 Flagellin protein FlaG K06603 flaG; flagellar protein FlaG
D VPUCM_2343 Flagellar rod protein flaI K06604 flaI; flagellar protein FlaI
D VPUCM_2322 Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D VPUCM_2321 Flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D VPUCM_2697 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VPUCM_2696 Twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VPUCM_2609 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VPUCM_2610 Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VPUCM_2611 Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VPUCM_2612 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VPUCM_1831 Type IV pilus (Tfp) assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VPUCM_2849 Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VPUCM_2850 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VPUCM_2851 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VPUCM_2852 Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VPUCM_2853 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VPUCM_0664 Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VPUCM_0662 Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VPUCM_0660 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VPUCM_0820 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPUCM_0822 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D VPUCM_0823 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D VPUCM_0828 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D VPUCM_0829 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPUCM_21335 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D VPUCM_21334 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D VPUCM_21333 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21337 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPUCM_21336 Sigma-fimbriae uncharacterized subunit K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vph04812]
D VPUCM_2792 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPUCM_0699 Rod shape determination protein K18640 parM; plasmid segregation protein ParM
D VPUCM_0455 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPUCM_0454 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VPUCM_0975 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VPUCM_0974 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VPUCM_0973 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VPUCM_p0052 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_3160 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_2315 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VPUCM_p0053 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_3159 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPUCM_21555 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vph04147]
D VPUCM_2402 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VPUCM_2648 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VPUCM_20446 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2245 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPUCM_2682 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VPUCM_0377 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_2112 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_20726 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPUCM_0883 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VPUCM_0567 Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VPUCM_20275 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_2950 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPUCM_0777 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_0658 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VPUCM_2834 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPUCM_0600 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VPUCM_3014 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_2871 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D VPUCM_1078 YcfF/hinT protein: a purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VPUCM_20140 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPUCM_0372 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0971 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_1255 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_20526 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPUCM_0516 Sodium-dependent phosphate transporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VPUCM_20472 3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_20555 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_21022 3-ketoacyl-CoA thiolase [isoleucine degradation] K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPUCM_2401 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPUCM_2267 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VPUCM_2859 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VPUCM_0336 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VPUCM_0842 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPUCM_21440 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VPUCM_0854 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VPUCM_0115 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPUCM_0099 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VPUCM_1875 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPUCM_21065 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPUCM_20979 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2251 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2675 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VPUCM_2993 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VPUCM_2603 Glutathione reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPUCM_20521 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D VPUCM_1790 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPUCM_0264 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPUCM_20926 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vph02048]
D VPUCM_1064 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D VPUCM_1065 CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D VPUCM_1066 CRISPR-associated protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D VPUCM_0724 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VPUCM_1164 type I restriction-modification system, S subunit, putative K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VPUCM_0723 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VPUCM_0722 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VPUCM_1161 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VPUCM_2845 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VPUCM_p0001 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VPUCM_0642 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D VPUCM_1152 putative endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D VPUCM_1153 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D VPUCM_0643 putative mcrC protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D VPUCM_0725 Mrr restriction system protein K07448 mrr; restriction system protein
D VPUCM_p0009 hypothetical protein K07172 mazE; antitoxin MazE
D VPUCM_1479 Toxin YafO K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D VPUCM_2040 Phage shock protein C K03973 pspC; phage shock protein C
D VPUCM_2041 Phage shock protein B K03970 pspB; phage shock protein B
D VPUCM_1457 CcdB toxin protein K19163 ccdB; toxin CcdB
D VPUCM_1458 CcdA protein (antitoxin to CcdB) K19164 ccdA; antitoxin CcdA
D VPUCM_1413 Death on curing protein, Doc toxin K19092 parE1_3_4; toxin ParE1/3/4
D VPUCM_0455 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VPUCM_2792 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VPUCM_0426 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VPUCM_0425 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VPUCM_2462 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VPUCM_2666 YgfY K09159 cptB; antitoxin CptB
D VPUCM_0581 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VPUCM_p0090 3'-phosphoadenosine 5'-phosphosulfate sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vph04090]
C 01504 Antimicrobial resistance genes [BR:vph01504]
D VPUCM_21162 Beta-lactamase K19217 blaCARB-17; beta-lactamase class A CARB-17 [EC:3.5.2.6]
D VPUCM_1211 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VPUCM_20025 Chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPUCM_21552 Acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPUCM_20089 Qnr K18555 qnr; fluoroquinolone resistance protein
D VPUCM_0382 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VPUCM_0381 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPUCM_20487 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1169 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_0039 putative Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1041 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D VPUCM_1170 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_0038 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VPUCM_21168 Putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPUCM_20488 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D VPUCM_20346 Outer membrane protein OprN K18300 oprN; outer membrane protein, multidrug efflux system
D VPUCM_20348 putative efflux protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VPUCM_20607 HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VPUCM_0420 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D VPUCM_20325 Membrane fusion protein of RND family multidrug efflux pump K18901 bpeE; membrane fusion protein, multidrug efflux system
D VPUCM_21169 putative Co/Zn/Cd efflux system membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vph00537]
D VPUCM_20979 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VPUCM_2251 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vph03100]
D VPUCM_3176 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_3249 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_21560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VPUCM_3200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3184 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3223 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3227 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3226 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3229 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3228 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VPUCM_3235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3238 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3241 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3191 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3243 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VPUCM_3180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3244 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3273 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3254 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3286 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VPUCM_3193 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_21567 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_21570 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VPUCM_3204 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3208 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3212 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3221 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3216 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_3210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VPUCM_21558 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3257 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3164 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3291 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_3177 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VPUCM_21566 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3278 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_21569 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3264 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3266 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3194 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3196 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3262 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3272 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3268 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3263 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VPUCM_3170 tRNA-His K14226 tRNA-His; tRNA His
D VPUCM_3172 tRNA-His K14226 tRNA-His; tRNA His
D VPUCM_3250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VPUCM_21565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3182 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_21568 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3213 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3211 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3217 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3219 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3209 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3207 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_3252 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VPUCM_21559 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3165 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3290 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VPUCM_3174 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3202 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3214 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3218 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3205 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3183 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3269 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3267 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3259 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3271 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3261 tRNA-Met K14230 tRNA-Met; tRNA Met
D VPUCM_3232 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3239 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3237 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3234 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VPUCM_3171 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_3201 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_3173 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VPUCM_21564 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_21571 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3199 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3283 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3231 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VPUCM_3233 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3236 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3242 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3246 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3277 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VPUCM_3181 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPUCM_3253 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VPUCM_3185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3189 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3188 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3187 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3186 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_3279 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VPUCM_21561 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3289 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3166 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3197 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3198 tRNA-Val K14237 tRNA-Val; tRNA Val
D VPUCM_3163 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3251 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3258 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3292 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3276 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3175 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3282 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_21557 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VPUCM_3275 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3281 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3285 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3288 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_21562 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3167 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3178 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3248 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3256 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VPUCM_3179 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_21563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3255 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3247 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3168 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3274 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VPUCM_3245 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VPUCM_21078 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D VPUCM_20660 Aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D VPUCM_3054 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D VPUCM_2239 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VPUCM_21250 Putative oxidoreductase YncB K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D VPUCM_20994 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VPUCM_20523 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VPUCM_2628 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VPUCM_1583 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D VPUCM_21500 Alkyl hydroperoxide reductase protein F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D VPUCM_2089 Cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D VPUCM_20288 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPUCM_0330 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPUCM_20200 Peptide methionine sulfoxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D VPUCM_2244 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VPUCM_20396 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VPUCM_1130 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VPUCM_20575 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPUCM_1797 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPUCM_2361 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VPUCM_21499 Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D VPUCM_21497 Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VPUCM_2349 putative dye-decolorizing peroxidase (DyP), YfeX-like subgroup K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VPUCM_20036 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VPUCM_20405 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VPUCM_2906 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VPUCM_0073 Ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2]
D VPUCM_21410 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D VPUCM_2365 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VPUCM_20834 Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VPUCM_21393 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPUCM_1104 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPUCM_1551 radical activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VPUCM_2027 NADH oxidoreductase hcr K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D VPUCM_2642 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VPUCM_1201 Cyclopropane-fatty-acyl-phospholipid synthase, plant type K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VPUCM_21207 Radical SAM family protein HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D VPUCM_1838 Galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D VPUCM_20543 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPUCM_20202 Acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPUCM_20066 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D VPUCM_2493 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VPUCM_0692 Acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VPUCM_1469 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D VPUCM_2740 Histone acetyltransferase HPA2 K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VPUCM_21396 Histone acetyltransferase HPA2 K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D VPUCM_1542 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D VPUCM_2190 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VPUCM_2191 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VPUCM_0192 hypothetical protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D VPUCM_3062 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VPUCM_1536 Putative cytoplasmic protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VPUCM_1025 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VPUCM_0513 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VPUCM_0893 Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VPUCM_20357 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VPUCM_0417 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VPUCM_1010 Selenoprotein O and cysteine-containing K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VPUCM_1765 hypothetical protein K26088 vopS; protein adenylyltransferase VopS [EC:2.7.7.108]
D VPUCM_20097 Macro domain, possibly ADP-ribose binding module K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D VPUCM_0989 4-hydroxybenzoyl-CoA thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPUCM_2155 4-hydroxybenzoyl-CoA thioesterase family active site protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPUCM_21411 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VPUCM_1264 putative metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VPUCM_2293 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VPUCM_21049 Rtn protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPUCM_1548 HD-domain protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D VPUCM_2691 Endonuclease I precursor Extracellular deoxyribonuclease Dns K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VPUCM_0751 Endonuclease I precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VPUCM_0805 Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPUCM_0098 Putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPUCM_2118 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VPUCM_2387 Esterase ybfF K01175 ybfF; esterase [EC:3.1.-.-]
D VPUCM_2548 hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VPUCM_2416 Endoglucanase precursor K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D VPUCM_20734 Chitodextrinase precursor K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VPUCM_20096 Putative isomerase K03931 ygjK; glucosidase [EC:3.2.1.-]
D VPUCM_3123 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VPUCM_20685 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VPUCM_2722 Deacetylase DA1 K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D VPUCM_2786 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VPUCM_21248 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VPUCM_2756 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VPUCM_1411 Translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VPUCM_2260 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VPUCM_0414 Adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VPUCM_2131 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VPUCM_20631 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPUCM_21282 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPUCM_20893 Putative regulator protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPUCM_21394 Transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D VPUCM_20518 NAD(P)HX epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VPUCM_20227 4-aminobutyrate aminotransferase K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D VPUCM_0874 Cysteine desulfurase CsdA-CsdE, main protein CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VPUCM_0337 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VPUCM_1520 DNA ligase (ATP) K26441 lig; DNA ligase [EC:6.5.1.1]
D VPUCM_2210 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VPUCM_2209 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VPUCM_2208 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VPUCM_0887 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VPUCM_0888 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VPUCM_0889 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VPUCM_0890 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VPUCM_0891 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VPUCM_0892 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VPUCM_1640 Type cbb3 cytochrome oxidase biogenesis protein CcoI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VPUCM_1074 Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D VPUCM_2589 Sugar/maltose fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D VPUCM_20620 Periplasmic protein torT precursor K11930 torT; periplasmic protein TorT
D VPUCM_0571 Putative acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D VPUCM_1601 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D VPUCM_20847 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D VPUCM_1071 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin
D VPUCM_1282 Ferredoxin K11107 yfaE; ferredoxin
D VPUCM_2211 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VPUCM_2212 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VPUCM_2207 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VPUCM_0001 Flavoprotein MioC K06205 mioC; MioC protein
D VPUCM_0499 Flavodoxin 2 K03840 fldB; flavodoxin II
D VPUCM_0582 Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D VPUCM_21354 Soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D VPUCM_20479 Periplasmic nitrate reductase component NapD K02570 napD; periplasmic nitrate reductase NapD
D VPUCM_20480 Ferredoxin-type protein NapF (periplasmic nitrate reductase) K02572 napF; ferredoxin-type protein NapF
D VPUCM_2055 Periplasmic nitrate reductase component NapE K02571 napE; periplasmic nitrate reductase NapE
D VPUCM_1295 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D VPUCM_2389 Flavodoxin 1 K03839 fldA; flavodoxin I
D VPUCM_20476 Cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
D VPUCM_21317 Ferredoxin-type protein NapG (periplasmic nitrate reductase) K02573 napG; ferredoxin-type protein NapG
D VPUCM_21316 Polyferredoxin NapH (periplasmic nitrate reductase) K02574 napH; ferredoxin-type protein NapH
D VPUCM_20522 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D VPUCM_1290 Cytochrome c-type protein NrfB precursor K04013 nrfB; cytochrome c-type protein NrfB
D VPUCM_1291 NrfC protein K04014 nrfC; protein NrfC
D VPUCM_1292 NrfD protein K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VPUCM_2430 Sulfate transporter, CysZ-type K06203 cysZ; CysZ protein
D VPUCM_21351 Glyoxylase family protein K08234 yaeR; glyoxylase I family protein
D VPUCM_20098 Lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein
D VPUCM_21545 Gamma-D-Glutamyl-meso-Diaminopimelate Amidase K14054 mpaA; murein peptide amidase A
D VPUCM_2698 Hypothetical protein YggS, proline synthase co-transcribed bacterial PROSC K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VPUCM_2101 membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D VPUCM_2100 Heat shock (predicted periplasmic) protein YciM, precursor K19804 lapB; lipopolysaccharide assembly protein B
D VPUCM_21492 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D VPUCM_0199 Beta-1,4-galactosyltransferase K07270 K07270; glycosyl transferase, family 25
D VPUCM_2417 Cyclic di-GMP binding protein precursor K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D VPUCM_21135 Pantothenate kinase K02173 yggC; putative kinase
D VPUCM_3075 HemY-like protein K02498 hemY; HemY protein
D VPUCM_0093 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D VPUCM_0092 Protein YigP clustered with ubiquinone biosynthetic genes K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VPUCM_0037 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VPUCM_0691 Putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VPUCM_0909 Multidrug efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
D VPUCM_0665 Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D VPUCM_2285 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D VPUCM_20037 Membrane protein K15977 K15977; putative oxidoreductase
D VPUCM_3096 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) K15977 K15977; putative oxidoreductase
D VPUCM_20789 Protein acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VPUCM_21090 Cold shock protein CspE K03704 cspA; cold shock protein
D VPUCM_20404 Cold shock protein CspA K03704 cspA; cold shock protein
D VPUCM_2196 Cold shock protein CspD K03704 cspA; cold shock protein
D VPUCM_3005 Regulator of sigma D K07740 rsd; regulator of sigma D
D VPUCM_2583 Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VPUCM_0145 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D VPUCM_2013 Heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D VPUCM_2195 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VPUCM_1017 Cell division trigger factor K03545 tig; trigger factor
D VPUCM_0648 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D VPUCM_3139 MG(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D VPUCM_1555 SM-20-related protein K07394 K07394; SM-20-related protein
D VPUCM_20057 Thioredoxin-like protein K07396 K07396; putative protein-disulfide isomerase
D VPUCM_2219 Thioredoxin K07396 K07396; putative protein-disulfide isomerase
D VPUCM_1462 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D VPUCM_20201 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D VPUCM_0141 NfuA Fe-S protein maturation K07400 nfuA; Fe/S biogenesis protein NfuA
D VPUCM_2406 Selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D VPUCM_20572 Putative membrane-bound ClpP-class protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D VPUCM_1051 putative methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VPUCM_2525 Exodeoxyribonuclease IX K01146 xni; protein Xni
D VPUCM_0185 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VPUCM_0763 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VPUCM_0090 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D VPUCM_20755 putative ATP-dependent endonuclease of the OLD family, YbjD subgroup K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VPUCM_0440 putative endonuclease K07460 yraN; putative endonuclease
D VPUCM_20454 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D VPUCM_3121 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D VPUCM_1185 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
D VPUCM_3118 C-terminal Zn-finger domain of DNA topoisomerase I - like protein K07479 yrdD; putative DNA topoisomerase
D VPUCM_0765 putative primase K06919 K06919; putative DNA primase/helicase
D VPUCM_0791 TonB-dependent receptor K07482 K07482; transposase, IS30 family
D VPUCM_0767 Transposase K07484 K07484; transposase
D VPUCM_0771 transposase K07484 K07484; transposase
D VPUCM_20597 Mobile element protein K07485 K07485; transposase
D VPUCM_2724 Mobile element protein K07493 K07493; putative transposase
D VPUCM_1056 putative transposase K07497 K07497; putative transposase
D VPUCM_1150 Mobile element protein K07497 K07497; putative transposase
D VPUCM_2012 Mobile element protein K07497 K07497; putative transposase
D VPUCM_1426 Mobile element protein K07497 K07497; putative transposase
D VPUCM_0646 Mobile element protein K07497 K07497; putative transposase
D VPUCM_1505 Mobile element protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VPUCM_2042 Phage shock protein A K03969 pspA; phage shock protein A
D VPUCM_20273 Phage shock protein E K03972 pspE; phage shock protein E
D VPUCM_2265 hypothetical protein co-occurring with RecR K09747 ebfC; nucleoid-associated protein EbfC
D VPUCM_20196 Deoxyribodipyrimidine photolyase, single-strand-specific K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VPUCM_1313 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPUCM_1587 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPUCM_1804 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VPUCM_2399 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VPUCM_0412 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VPUCM_0844 putative sodium-dependent galactose transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPUCM_20078 putative transporter protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPUCM_20081 sodium-solute symporter, putative K03307 TC.SSS; solute:Na+ symporter, SSS family
D VPUCM_0901 Sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPUCM_2031 Putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPUCM_2115 Sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VPUCM_0494 Sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPUCM_0623 Sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPUCM_1822 Sodium/glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VPUCM_0498 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VPUCM_20180 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VPUCM_0806 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPUCM_0979 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPUCM_20188 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPUCM_20661 Di-and tricarboxylate transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D VPUCM_1985 TrkA, Potassium channel-family protein K07085 K07085; putative transport protein
C 99978 Cell growth
D VPUCM_1250 Intracellular septation protein IspA K06190 ispZ; intracellular septation protein
D VPUCM_3130 putative Transcriptional Regulator K06377 spo0M; sporulation-control protein
D VPUCM_1940 putative SpoOM-related protein K06377 spo0M; sporulation-control protein
D VPUCM_1519 Anti anti-sigma regulatory factor SypA K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D VPUCM_1099 SpoVR-like protein K06415 spoVR; stage V sporulation protein R
D VPUCM_2932 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VPUCM_1082 Lipoprotein YcfM, part of a salvage pathway of unknown substrate K07337 K07337; penicillin-binding protein activator
D VPUCM_2180 Positive regulator of competence TfoX K07343 tfoX; DNA transformation protein and related proteins
D VPUCM_1976 Regulator of competence-specific genes K07343 tfoX; DNA transformation protein and related proteins
D VPUCM_2520 Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D VPUCM_1684 ProQ: influences osmotic activation of compatible solute ProP K03607 proQ; ProP effector
D VPUCM_20808 Universal stress protein family 2 K06149 uspA; universal stress protein A
D VPUCM_0072 Universal stress protein A K06149 uspA; universal stress protein A
D VPUCM_1636 Universal stress protein E K14055 uspE; universal stress protein E
D VPUCM_0342 Universal stress protein family 3 K14061 uspF; universal stress protein F
D VPUCM_0117 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D VPUCM_0881 hypothetical protein K07167 chrR; putative transcriptional regulator
D VPUCM_2490 Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VPUCM_2784 putative ATPase K07175 phoH2; PhoH-like ATPase
D VPUCM_1101 Serine protein kinase (prkA protein), P-loop containing K07180 prkA; serine protein kinase
D VPUCM_20069 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPUCM_1316 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPUCM_0845 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPUCM_1806 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPUCM_2974 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
D VPUCM_0411 Arylsulfatase K07184 ygiM; SH3 domain protein
D VPUCM_0811 Lipoate-protein ligase A K07186 smp; membrane protein
D VPUCM_1694 hypothetical protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D VPUCM_1184 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D VPUCM_2482 Outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D VPUCM_2302 Lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VPUCM_2189 Outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D VPUCM_2024 putative outer membrane lipoprotein Pcp K06077 slyB; outer membrane lipoprotein SlyB
D VPUCM_0928 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D VPUCM_2641 Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D VPUCM_0685 Lipoprotein nlpI precursor K05803 nlpI; lipoprotein NlpI
D VPUCM_20090 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D VPUCM_2839 membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D VPUCM_0969 Starvation lipoprotein Slp K07285 slp; outer membrane lipoprotein
D VPUCM_0884 putative lipoprotein YajG precursor K07286 yajG; uncharacterized lipoprotein
D VPUCM_2138 AsmA protein K07289 asmA; AsmA protein
D VPUCM_2426 Putative activity regulator of membrane protease YbbK K07340 ybbJ; inner membrane protein
D VPUCM_1794 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG K01993 ABC-2.TX; HlyD family secretion protein
D VPUCM_21150 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG K01993 ABC-2.TX; HlyD family secretion protein
D VPUCM_2072 Membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D VPUCM_2307 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VPUCM_2304 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VPUCM_0591 putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
D VPUCM_1533 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D VPUCM_0564 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VPUCM_20769 Periplasmic divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D VPUCM_0566 Cytoplasmic copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
D VPUCM_0357 ApaG protein K06195 apaG; ApaG protein
D VPUCM_3070 Frataxin-like protein CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VPUCM_21206 Putative heme iron utilization protein K07227 chuX; heme iron utilization protein
D VPUCM_1298 Iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
D VPUCM_0850 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VPUCM_2275 Bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D VPUCM_1633 Putative Bax protein K03796 bax; Bax protein
D VPUCM_2091 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D VPUCM_20415 Oxidoreductase, Gfo/Idh/MocA family K03810 mviM; virulence factor
D VPUCM_0313 ElaA protein K02348 elaA; ElaA protein
D VPUCM_0077 putative hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D VPUCM_21134 putative histidinol phosphatase-related hydrolase of the PHP family K04477 ycdX; putative hydrolase
D VPUCM_21355 putative histidinol phosphatase-related hydrolase of the PHP family K04477 ycdX; putative hydrolase
D VPUCM_0488 Pyruvate formate-lyase K06866 grcA; autonomous glycyl radical cofactor
D VPUCM_0848 tRNA-binding protein YgjH K06878 K06878; tRNA-binding protein
D VPUCM_2586 bifunctional outer membrane translocase K07001 K07001; NTE family protein
D VPUCM_1353 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D VPUCM_20118 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VPUCM_2562 putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D VPUCM_20691 Integral membrane protein K07038 K07038; inner membrane protein
D VPUCM_0120 Inner membrane protein YihY, formerly thought to be RNase BN K07058 K07058; membrane protein
D VPUCM_2960 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D VPUCM_0872 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE K02426 sufE; cysteine desulfuration protein SufE
D VPUCM_21421 Rhodanese domain protein UPF0176 K07146 K07146; UPF0176 protein
D VPUCM_1206 a protein of unknown function perhaps involved in purine metabolism K07153 hflD; high frequency lysogenization protein
D VPUCM_20649 LemA protein K03744 lemA; LemA protein
D VPUCM_2881 Protein slyX K03745 slyX; SlyX protein
D VPUCM_3120 Protein of unknown function Smg K03747 smg; Smg protein
D VPUCM_20738 Conserved uncharacterized protein CreA K05805 creA; CreA protein
D VPUCM_2690 Protein sprT K02742 sprT; SprT protein
D VPUCM_2276 DedD protein K03749 dedD; DedD protein
D VPUCM_2846 DamX, an inner membrane protein involved in bile resistance K03112 damX; DamX protein
D VPUCM_1961 SanA protein K03748 sanA; SanA protein
D VPUCM_1687 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VPUCM_2090 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VPUCM_21446 membrane protein K08974 K08974; putative membrane protein
D VPUCM_20770 membrane protein K08984 yjdF; putative membrane protein
D VPUCM_3061 membrane protein K08985 K08985; putative lipoprotein
D VPUCM_1143 Membrane protein with DUF350 domain K08989 K08989; putative membrane protein
D VPUCM_1338 Membrane protein YcjF K08990 ycjF; putative membrane protein
D VPUCM_3043 hypothetical protein K08993 yhhL; putative membrane protein
D VPUCM_1223 UPF0225 protein YchJ K09858 K09858; SEC-C motif domain protein
D VPUCM_1050 Lipoprotein-related protein K09914 K09914; putative lipoprotein
D VPUCM_20088 hypothetical protein K11312 K11312; cupin 2 domain-containing protein
D VPUCM_21464 Maltose operon periplasmic protein MalM K05775 malM; maltose operon periplasmic protein
D VPUCM_0170 hypothetical protein K13256 psiE; protein PsiE
D VPUCM_20760 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D VPUCM_1618 ankyrin 2,3/unc44 - like protein K06867 K06867; uncharacterized protein
D VPUCM_20293 AnkB protein K06867 K06867; uncharacterized protein
D VPUCM_20630 Putative arylsulfatase regulatory protein K06871 K06871; uncharacterized protein
D VPUCM_20643 Putative arylsulfatase regulatory protein K06871 K06871; uncharacterized protein
D VPUCM_21043 Putative arylsulfatase regulatory protein K06871 K06871; uncharacterized protein
D VPUCM_1758 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D VPUCM_1759 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D VPUCM_1337 Conserved protein YcjX with nucleoside triphosphate hydrolase domain K06918 K06918; uncharacterized protein
D VPUCM_20960 putative DNA-binding protein K06934 K06934; uncharacterized protein
D VPUCM_2257 proteinase inhibitor, putative K06940 K06940; uncharacterized protein
D VPUCM_20432 metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D VPUCM_1199 Amine oxidase, flavin-containing K06954 K06954; uncharacterized protein
D VPUCM_1916 L-cystine uptake protein TcyP K06956 K06956; uncharacterized protein
D VPUCM_21320 putative acetyltransferase K06975 K06975; uncharacterized protein
D VPUCM_20898 putative deacylase K06987 K06987; uncharacterized protein
D VPUCM_2553 putative deacylase K06987 K06987; uncharacterized protein
D VPUCM_20291 Glyoxalase family protein K06996 K06996; uncharacterized protein
D VPUCM_1424 Glyoxalase family protein K06996 K06996; uncharacterized protein
D VPUCM_1490 Glyoxalase family protein K06996 K06996; uncharacterized protein
D VPUCM_1084 YcfP protein: probably an esterase that is part of a salvage cluster K07000 K07000; uncharacterized protein
D VPUCM_0424 Putative esterase K07000 K07000; uncharacterized protein
D VPUCM_1931 putative exporter of the RND superfamily K07003 K07003; uncharacterized protein
D VPUCM_2899 Extracellular deoxyribonuclease Xds K07004 K07004; uncharacterized protein
D VPUCM_20439 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07005 K07005; uncharacterized protein
D VPUCM_0197 putative hydrolase K07014 K07014; uncharacterized protein
D VPUCM_0863 putative hydrolase K07014 K07014; uncharacterized protein
D VPUCM_2233 hydrolase of alkaline phosphatase superfamily K07014 K07014; uncharacterized protein
D VPUCM_2889 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K07019 K07019; uncharacterized protein
D VPUCM_2529 putative hydrolase of the alpha/beta-hydrolase fold protein K07020 K07020; uncharacterized protein
D VPUCM_0621 hypothetical protein K07034 K07034; uncharacterized protein
D VPUCM_2147 Protein export cytoplasm protein SecA ATPase RNA helicase K07039 K07039; uncharacterized protein
D VPUCM_1146 hypothetical protein K07039 K07039; uncharacterized protein
D VPUCM_2884 Putative cytoplasmic protein, probably associated with Glutathione-regulated potassium-efflux K07070 K07070; uncharacterized protein
D VPUCM_2412 Cell division inhibitor K07071 K07071; uncharacterized protein
D VPUCM_1736 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D VPUCM_0345 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D VPUCM_20181 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D VPUCM_1735 putative permease K07090 K07090; uncharacterized protein
D VPUCM_20903 hypothetical protein K07090 K07090; uncharacterized protein
D VPUCM_0464 Putative membrane protein YfcA K07090 K07090; uncharacterized protein
D VPUCM_2405 putative permease K07090 K07090; uncharacterized protein
D VPUCM_2202 hypothetical protein K07090 K07090; uncharacterized protein
D VPUCM_0512 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D VPUCM_20174 Putative phosphatase K07093 K07093; uncharacterized protein
D VPUCM_2407 Phosphodiesterase yfcE K07095 K07095; uncharacterized protein
D VPUCM_0328 Protein ytfJ precursor K07109 K07109; uncharacterized protein
D VPUCM_20213 Protein ytfJ precursor K07109 K07109; uncharacterized protein
D VPUCM_20840 putative transporter component K07112 K07112; uncharacterized protein
D VPUCM_20841 putative transmembrane protein K07112 K07112; uncharacterized protein
D VPUCM_0441 LppC putative lipoprotein K07121 K07121; uncharacterized protein
D VPUCM_1952 hypothetical protein K07126 K07126; uncharacterized protein
D VPUCM_1798 hypothetical protein K07126 K07126; uncharacterized protein
D VPUCM_20900 glutathione S-transfersae-related protein K07136 K07136; uncharacterized protein
D VPUCM_1072 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D VPUCM_0477 putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D VPUCM_21224 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K07140 K07140; MOSC domain-containing protein
D VPUCM_0878 Uncharacterized protein, N-terminal domain of Lon protease K07157 K07157; uncharacterized protein
D VPUCM_0400 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D VPUCM_2701 UPF0235 protein K09131 K09131; uncharacterized protein
D VPUCM_2504 putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D VPUCM_1102 hypothetical protein K09161 K09161; uncharacterized protein
D VPUCM_1200 Hypothetical protein K09701 K09701; uncharacterized protein
D VPUCM_20249 Hemolysin K09712 K09712; uncharacterized protein
D VPUCM_21553 putative polymerase K09749 K09749; uncharacterized protein
D VPUCM_0910 hypothetical protein K09768 K09768; uncharacterized protein
D VPUCM_1248 YciL protein K09780 K09780; uncharacterized protein
D VPUCM_21227 hypothetical protein K09781 K09781; uncharacterized protein
D VPUCM_1100 UPF0229 protein YeaH K09786 K09786; uncharacterized protein
D VPUCM_2268 hypothetical protein K09790 K09790; uncharacterized protein
D VPUCM_1097 Protein YcaR in KDO2-Lipid A biosynthesis cluster K09791 K09791; uncharacterized protein
D VPUCM_1638 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D VPUCM_20382 hypothetical protein K09794 K09794; uncharacterized protein
D VPUCM_0394 putative periplasmic protein K09797 K09797; uncharacterized protein
D VPUCM_0650 UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D VPUCM_20450 UPF0265 protein YeeX K09802 K09802; uncharacterized protein
D VPUCM_2676 Protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D VPUCM_20236 Virulence factor VirK K09824 virK; uncharacterized protein
D VPUCM_20309 putative exported protein K05952 K05952; uncharacterized protein
D VPUCM_0894 putative exported or periplasmic protein in ApbE locus K05952 K05952; uncharacterized protein
D VPUCM_1690 hypothetical protein K00243 K00243; uncharacterized protein
D VPUCM_2092 putative lipoprotein K09857 K09857; uncharacterized protein
D VPUCM_1079 putative lipoprotein K09859 K09859; uncharacterized protein
D VPUCM_0495 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D VPUCM_2615 zinc-binding protein K09862 K09862; uncharacterized protein
D VPUCM_2998 hypothetical protein K09891 K09891; uncharacterized protein
D VPUCM_0107 Protein of unknown function DUF414 K09894 K09894; uncharacterized protein
D VPUCM_2671 Putative conserved exported protein precursor K09895 K09895; uncharacterized protein
D VPUCM_3133 Protein yihD K09896 K09896; uncharacterized protein
D VPUCM_20034 hypothetical protein K09897 K09897; uncharacterized protein
D VPUCM_2890 hypothetical protein K09898 K09898; uncharacterized protein
D VPUCM_1135 hypothetical protein K09899 K09899; uncharacterized protein
D VPUCM_1268 hypothetical protein K09901 K09901; uncharacterized protein
D VPUCM_0976 Protein YcgL K09902 K09902; uncharacterized protein
D VPUCM_2232 hypothetical protein K09904 K09904; uncharacterized protein
D VPUCM_0964 Protein yecM K09907 K09907; uncharacterized protein
D VPUCM_0429 Putative cytochrome d ubiquinol oxidase subunit III (Cytochrome bd-I oxidase subunit III) K09908 K09908; uncharacterized protein
D VPUCM_21408 Acetylornithine deacetylase K09909 K09909; uncharacterized protein
D VPUCM_2199 hypothetical protein K09909 K09909; uncharacterized protein
D VPUCM_2584 hypothetical protein K09910 K09910; uncharacterized protein
D VPUCM_1671 hypothetical protein K09911 K09911; uncharacterized protein
D VPUCM_20363 Nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D VPUCM_20453 Protein of unknown function YceH K09915 K09915; uncharacterized protein
D VPUCM_2242 Uncharacterized protein YeaC K09916 K09916; uncharacterized protein
D VPUCM_20809 hypothetical protein K09917 K09917; uncharacterized protein
D VPUCM_0860 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS K09918 K09918; uncharacterized protein
D VPUCM_0422 Putative cytoplasmic protein K09920 K09920; uncharacterized protein
D VPUCM_3066 Protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D VPUCM_20173 hypothetical protein K09923 K09923; uncharacterized protein
D VPUCM_1641 CcoH-like protein K09926 K09926; uncharacterized protein
D VPUCM_1093 hypothetical protein K09928 K09928; uncharacterized protein
D VPUCM_3094 hypothetical protein K09930 K09930; uncharacterized protein
D VPUCM_2909 Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D VPUCM_2369 hypothetical protein K09938 K09938; uncharacterized protein
D VPUCM_20151 putative membrane protein K09939 K09939; uncharacterized protein
D VPUCM_1904 hypothetical protein K09941 K09941; uncharacterized protein
D VPUCM_1301 putative exported protein K09947 K09947; uncharacterized protein
D VPUCM_1045 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D VPUCM_0323 hypothetical protein K09950 K09950; uncharacterized protein
D VPUCM_21061 Putative cytoplasmic protein K09954 K09954; uncharacterized protein
D VPUCM_20611 Hypothetical protein colocalized with Enterobactin receptor VctA K09956 K09956; uncharacterized protein
D VPUCM_2470 hypothetical protein K09973 K09973; uncharacterized protein
D VPUCM_2384 hypothetical protein K09977 K09977; uncharacterized protein
D VPUCM_0413 Phosphate transport regulator (distant of PhoU) K07220 K07220; uncharacterized protein
D VPUCM_1300 Iron-regulated protein A precursor K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024