+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Vigna radiata (mung bean)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        106777530 DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        106775797 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        106762532 DNA-directed RNA polymerase II subunit RPB2 isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        106765660 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        106755651 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        106775356 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        106773557 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        106765538 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        106764297 DNA-directed RNA polymerase II subunit RPB7 isoform X1	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        106770848 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        106760224 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        106767320 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        106752541 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106767413 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106760544 DNA-directed RNA polymerase V subunit 5C isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769565 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769573 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106763925 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106771260 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106770877 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106761461 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106769948 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106767094 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        106761322 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        106777329 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        106777974 DNA-directed RNA polymerase IV subunit 1 isoform X1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        106779261 LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        106762065 DNA-directed RNA polymerases IV and V subunit 2	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        106771240 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        106758062 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        106762385 transcription initiation factor IIA subunit 1 isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        106778943 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        106757229 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        106776307 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        106772666 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        106754936 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        106777544 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        106768217 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        106764661 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        106765332 transcription initiation factor TFIID subunit 5 isoform X2	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        106762344 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        106758550 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        106775101 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        106763916 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        106764373 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        106769930 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        106759260 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        106764413 transcription initiation factor TFIID subunit 9 isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        106767081 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        106758746 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        106773625 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        106774141 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        106772695 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        106770840 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        106756284 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        106768620 transcription initiation factor IIE subunit alpha isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        106766842 general transcription factor IIE subunit 2	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        106776399 transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        106765786 transcription initiation factor IIF subunit alpha isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        106775719 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        106765978 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        106759800 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        106772494 probable RNA polymerase II transcription factor B subunit 1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        106753698 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        106759988 RNA polymerase II transcription factor B subunit 4 isoform X1	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        106765355 general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        106768950 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        106774431 DNA repair helicase XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        106767754 RNA polymerase II transcription factor B subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        106774441 cyclin-dependent kinase D-3 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        106774524 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        106777693 uncharacterized protein LOC106777693	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        106779297 uncharacterized protein LOC106779297	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        106772644 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        106773599 mediator of RNA polymerase II transcription subunit 6 isoform X1	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        106777966 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        106769198 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        106755187 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        106777189 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        106767335 mediator of RNA polymerase II transcription subunit 20a	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        106761503 mediator of RNA polymerase II transcription subunit 22b	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        106767435 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        106773691 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        106767264 mediator of RNA polymerase II transcription subunit 10b	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        106770981 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        106771045 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        106775703 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        106768534 cyclin-dependent kinase E-1 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        106759473 cyclin-C1-2 isoform X1	K15161 CCNC; cyclin-C 
E        106779636 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        106777520 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        106777592 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        106758030 mediator of RNA polymerase II transcription subunit 27 isoform X1	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        106776298 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        106770757 mediator of RNA polymerase II transcription subunit 33B isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        106775740 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        106759199 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        106757920 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        106777062 transformation/transcription domain-associated protein isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        106774442 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        106779978 transcriptional adapter ADA2b isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        106768217 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        106764661 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        106765332 transcription initiation factor TFIID subunit 5 isoform X2	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        106762344 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        106758550 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        106775101 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        106763916 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        106764413 transcription initiation factor TFIID subunit 9 isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        106767081 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        106758746 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        106774141 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        106772695 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        106752666 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        106753905 uncharacterized protein LOC106753905 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        106764564 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        106753669 transcription and mRNA export factor SUS1 isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        106765229 ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        106769266 ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        106757619 splicing factor 3B subunit 3 isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
E        106772043 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        106774005 probable global transcription activator SNF2L2 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        106766995 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        106762189 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        106765008 SWI/SNF complex subunit SWI3C isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        106778856 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        106756224 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        106759780 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        106753992 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        106752724 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        106768954 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        106769397 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        106774356 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        106766995 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        106766984 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        106779729 RNA polymerase II transcriptional coactivator KIWI	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        106753246 cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        106762536 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        106753616 transcription elongation factor SPT4 homolog 2 isoform X1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        106778851 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        106753887 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        106760628 transcription elongation factor SPT6-like isoform X2	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        106771930 polyadenylation and cleavage factor homolog 4 isoform X2	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        106757735 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        106780408 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        106754373 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        106771382 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        106776218 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        106775913 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        106765134 uncharacterized protein LOC106765134 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        106754129 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106765062 serine/threonine-protein phosphatase PP1 isozyme 4 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106772054 serine/threonine-protein phosphatase PP1 isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106777220 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106770773 serine/threonine-protein phosphatase alpha-3 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106768858 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106772213 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106775729 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        106761947 uncharacterized protein LOC106761947 isoform X1	K06100 SYMPK; symplekin 
E        106774101 symplekin	K06100 SYMPK; symplekin 
E        106765188 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        106764841 5'-3' exoribonuclease 3 isoform X2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        106776366 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        106776614 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        106753902 regulation of nuclear pre-mRNA domain-containing protein 2	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        106773996 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        106780118 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        106774037 uncharacterized protein LOC106774037	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        106765422 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        106774301 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        106776948 protein CDC73 homolog isoform X2	K15175 CDC73; parafibromin 
E        106761998 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        106758025 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        106760142 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        106756902 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        106768767 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        106757662 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        106770969 ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        106768665 cyclin-T1-4	K15188 CCNT; cyclin T 
E        106777965 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106762365 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106780405 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        106768665 cyclin-T1-4	K15188 CCNT; cyclin T 
E        106777965 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106762365 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106780405 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        106769362 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        106767917 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        106774382 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        106760157 la-related protein 6B isoform X2	K15191 LARP7; La-related protein 7 
E        106768665 cyclin-T1-4	K15188 CCNT; cyclin T 
E        106777965 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106762365 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        106780405 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        106756085 TATA-binding protein-associated factor BTAF1 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        106756201 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        106768953 protein Dr1 homolog isoform X3	K21751 DR1; down-regulator of transcription 1 
E        106765261 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        106764399 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        106759776 dr1-associated corepressor homolog isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        106769114 protein spt2	K15193 SPTY2D1; protein SPT2 
E        106776416 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        106768156 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        106772312 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        106762877 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        106759261 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        106765464 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X2	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        106762932 CTD nuclear envelope phosphatase 1 homolog	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        106775425 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        106776878 mitochondrial import inner membrane translocase subunit TIM50-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        106778370 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        106753410 transcriptional elongation regulator MINIYO isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        106772222 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        106769872 RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        106778158 agamous-like MADS-box protein AGL29	K12412 MCM1; pheromone receptor transcription factor 
E        106769534 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
E        106769378 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        106759857 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        106755757 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        106774417 DNA-directed RNA polymerase III subunit 2 isoform X1	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        106776067 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        106759525 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        106758637 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        106769808 DNA-directed RNA polymerase III subunit rpc3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        106776051 uncharacterized protein LOC106776051 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        106766589 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        106777907 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        106752994 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        106758972 probable DNA-directed RNA polymerase III subunit rpc6 isoform X2	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        106772934 DNA-directed RNA polymerase III subunit rpc6-like isoform X2	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        106775199 DNA-directed RNA polymerase III subunit RPC7	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        106752726 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        106757941 DNA-directed RNA polymerase III subunit RPC9-like isoform X2	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        106757346 DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        106755389 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        106776756 DNA-directed RNA polymerase III subunit RPC10-like isoform X1	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        106752541 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106767413 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106760544 DNA-directed RNA polymerase V subunit 5C isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769565 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769573 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106763925 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106771260 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106770877 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106761461 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106769948 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106767094 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        106761322 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        106777329 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        106763926 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        106754936 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        106774534 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        106753955 transcription factor IIIB 60 kDa subunit isoform X3	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        106753843 transcription factor IIIB 70 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        106776937 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        106777581 uncharacterized protein LOC106777581	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        106777531 uncharacterized protein LOC106777531 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        106772370 uncharacterized protein LOC106772370 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        106756028 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        106776349 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        106776533 uncharacterized protein LOC106776533	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        106764293 uncharacterized protein LOC106764293 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        106776349 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        106756028 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        106765455 uncharacterized protein LOC106765455	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        106768808 snRNA-activating protein complex subunit isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        106772499 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        106772074 DNA-directed RNA polymerase I subunit 1 isoform X1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        106755075 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        106776067 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        106759525 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        106758637 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        106759675 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        106759645 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        106771855 DNA-directed RNA polymerase I subunit RPA12-like isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        106758663 DNA-directed RNA polymerase I subunit RPA12-like isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        106752541 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106767413 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106760544 DNA-directed RNA polymerase V subunit 5C isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769565 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106769573 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106763925 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        106771260 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106770877 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        106761461 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106769948 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        106767094 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        106761322 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        106777329 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        106754936 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        106767009 high mobility group B protein 6	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        106752777 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        106774293 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        106776369 upstream activation factor subunit spp27 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        106753616 transcription elongation factor SPT4 homolog 2 isoform X1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        106778851 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        106768176 ISWI chromatin-remodeling complex ATPase CHR17	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        106775663 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
E        106779295 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        106765005 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
E        106778866 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        106765099 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        106757229 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        106776307 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        106772666 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        106756284 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        106768620 transcription initiation factor IIE subunit alpha isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 9, 2024