+D GENES KO #

  KEGG Orthology (KO) - Xanthomonas citri pv. citri mf20

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:xcf00010] D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_01936 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J172_03613 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J172_00229 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_02878 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J172_03526 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J172_03521 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J172_03048 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J172_03519 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J172_02191 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J172_00689 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J172_03836 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_00135 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_00234 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_01420 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J172_03603 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04468 lytic murein transglycosylase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D J172_03258 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] C 00020 Citrate cycle (TCA cycle) [PATH:xcf00020] D J172_03563 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J172_02029 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J172_02032 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J172_04003 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J172_01164 Isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D J172_01678 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J172_01677 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_03411 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J172_03412 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J172_02227 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J172_02229 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J172_02225 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J172_02226 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J172_01598 fumarase, class I, homodimeric K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J172_01685 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J172_01124 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J172_00689 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J172_03836 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:xcf00030] D J172_01936 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J172_02221 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_04249 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_02219 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D J172_00792 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J172_00587 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J172_03546 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J172_01020 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J172_03588 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D J172_00277 Ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J172_00936 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D J172_03257 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_01067 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J172_02218 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D J172_02217 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D J172_03387 quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D J172_01777 quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D J172_00661 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_04419 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_02897 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J172_04370 gluconate kinase, SKI family K00851 idnK; gluconokinase [EC:2.7.1.12] D J172_00249 Sugar kinase, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_00229 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J172_03613 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:xcf00040] D J172_03162 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_02535 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_03737 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_00275 5-keto 4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D J172_00276 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D J172_00773 Endopolygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D J172_02537 Endopolygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D J172_04422 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D J172_04402 D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D J172_04405 Mannitol-1-phosphate/altronate dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D J172_01695 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_03756 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_02455 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J172_00587 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J172_01921 D-xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D J172_04416 Sugar (pentulose and hexulose) kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D J172_01922 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J172_04398 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J172_02717 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D J172_04415 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:xcf00051] D J172_01943 Cellulase (glycosyl hydrolase family 5) K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J172_01701 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J172_03755 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04415 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D J172_00266 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J172_04356 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J172_04357 L-fuconolactonase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D J172_04360 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D J172_04358 2-dehydro-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D J172_04359 2,4-diketo-3-deoxy-L-fuconate hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D J172_03613 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J172_00229 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J172_02668 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J172_01922 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J172_04398 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_02878 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J172_00277 Ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J172_02669 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J172_03153 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:xcf00052] D J172_01420 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J172_03910 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J172_02455 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_01443 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_04421 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_03255 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D J172_03261 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D J172_03912 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J172_03613 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J172_00913 galactose 1-dehydrogenase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D J172_01910 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D J172_01908 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D J172_01911 2-keto-3-deoxy-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D J172_02772 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J172_02776 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J172_03487 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:xcf00053] D J172_01695 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_03756 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_00661 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_04419 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_00266 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J172_04356 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J172_04077 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01909 Gluconolactonase K13874 araB; L-arabinonolactonase [EC:3.1.1.15] D J172_02717 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:xcf00500] D J172_02772 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J172_02776 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J172_03487 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J172_03668 maltopentaose-forming -amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D J172_02455 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J172_03253 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04038 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01586 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01940 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04404 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_03693 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D J172_02690 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00458 Cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00726 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00134 Cellulase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00132 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00133 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_03258 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D J172_00539 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D J172_00540 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J172_00264 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J172_00914 Glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1] D J172_00263 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D J172_00542 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D J172_00262 Glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D J172_03432 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J172_00545 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J172_00543 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D J172_00541 maltooligosyl trehalose hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D J172_03386 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D J172_03384 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D J172_00717 Neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_01936 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J172_01701 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:xcf00520] D J172_01469 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J172_03251 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J172_00828 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D J172_01701 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J172_00827 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_03813 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_02885 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D J172_03820 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J172_04068 putative molecular chaperone distantly related to HSP70-fold metalloprotease K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D J172_02539 2-phosphoglycolate phosphatase, prokaryotic K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D J172_03130 putative phosphotransferase related to Ser/Thr protein kinase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D J172_03131 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D J172_03141 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J172_01951 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J172_00147 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J172_02256 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D J172_01419 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D J172_01408 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J172_04224 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J172_04355 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J172_04403 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_02455 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J172_01695 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_03756 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_03910 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J172_03912 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J172_04077 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J172_03153 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J172_01936 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J172_03755 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:xcf00620] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_00689 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J172_03836 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00135 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J172_03519 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J172_01542 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J172_00644 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J172_00642 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J172_02886 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J172_01056 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_00234 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J172_00239 L-lactate dehydrogenase (FMN-dependent) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D J172_00332 pyruvate dehydrogenase (quinone) K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D J172_03807 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D J172_01212 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J172_02897 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J172_03646 Malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D J172_01124 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J172_01598 fumarase, class I, homodimeric K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J172_01685 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J172_00924 Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J172_02191 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J172_00365 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_03631 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:xcf00630] D J172_00366 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_00365 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D J172_01124 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J172_03563 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J172_02029 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J172_02032 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_03664 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J172_02564 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J172_01341 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_04198 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_04158 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_02897 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J172_03797 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J172_00682 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J172_03520 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_00857 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J172_01344 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J172_03238 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_03237 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D J172_04533 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J172_02217 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D J172_00434 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J172_01780 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:xcf00640] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_00561 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J172_00560 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J172_00558 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_01542 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J172_00644 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J172_00642 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J172_02886 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J172_02656 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J172_03412 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J172_03411 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J172_01447 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J172_01263 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D J172_01264 aconitase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D J172_01267 2-methylaconitate cis-trans isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D J172_02032 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J172_01262 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:xcf00650] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_02163 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_01727 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D J172_00247 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J172_02198 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D J172_02197 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D J172_01537 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D J172_03664 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J172_02564 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J172_00477 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D J172_00478 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D J172_02227 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J172_02229 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J172_02225 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J172_02226 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J172_02636 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J172_01998 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J172_03753 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J172_03752 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J172_02195 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D J172_03628 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J172_03629 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:xcf00660] D J172_03628 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J172_03629 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J172_03412 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J172_03411 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J172_04323 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D J172_03634 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J172_03633 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J172_03632 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:xcf00562] D J172_03333 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01141 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_02548 Archaeal fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J172_02687 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D J172_00669 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_00929 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_04301 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_01447 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J172_02878 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:xcf00190] D J172_02875 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J172_02874 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J172_02873 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D J172_02872 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D J172_02871 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D J172_02870 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D J172_02869 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D J172_02868 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J172_02867 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D J172_02866 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J172_02865 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J172_02864 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J172_02863 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J172_02862 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J172_03990 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D J172_02227 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J172_02229 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J172_02225 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J172_02226 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J172_02624 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D J172_02623 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J172_02622 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D J172_04047 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J172_01394 cytochrome bo3 quinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D J172_04052 Heme/copper-type cytochrome/quinol oxidase, subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D J172_04055 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D J172_04056 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D J172_04053 Cytochrome oxidase assembly factor K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D J172_04048 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J172_01393 cytochrome bo3 quinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D J172_01392 cytochrome bo3 quinol oxidase subunit 1 apoprotein K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D J172_01391 cytochrome bo3 quinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D J172_03159 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_02500 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_03905 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_03158 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_02501 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_03906 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_02502 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J172_01829 Cytochrome c2 K08738 CYC; cytochrome c D J172_03826 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J172_03824 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J172_03825 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J172_03827 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J172_03823 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J172_03830 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J172_03828 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J172_03829 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J172_03617 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D J172_01158 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J172_01058 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:xcf00680] D J172_00760 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D J172_00849 S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00850 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D J172_00857 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J172_00924 Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J172_01124 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_00229 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J172_03613 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_02191 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J172_03048 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J172_01991 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_00126 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_01792 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:xcf00910] D J172_01423 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D J172_02662 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_00137 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J172_00136 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J172_01600 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J172_01723 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J172_01747 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J172_04247 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:xcf00920] D J172_01134 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J172_01135 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J172_01136 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J172_01137 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J172_03372 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00967 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00947 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J172_03371 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00966 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00945 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_03370 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00965 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00946 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00968 alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D J172_00444 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J172_00969 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J172_03503 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J172_03504 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J172_03243 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J172_03507 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D J172_03124 Sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J172_04204 Sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J172_03505 sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J172_03506 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D J172_01730 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J172_03803 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J172_03515 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J172_02496 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J172_03217 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J172_03216 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J172_02735 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:xcf00061] D J172_01542 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J172_00644 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J172_00642 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J172_02886 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J172_01253 acyl carrier protein K02078 acpP; acyl carrier protein D J172_04270 Acyl carrier protein K02078 acpP; acyl carrier protein D J172_01251 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_00679 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_01249 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_02112 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_02743 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_03800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_04254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_01254 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J172_01252 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00497 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00189 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_04259 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_02279 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_03799 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D J172_01547 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J172_00247 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J172_02027 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:xcf00071] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_02163 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J172_03232 Acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D J172_01610 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J172_02027 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:xcf00561] D J172_04533 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_00135 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J172_00471 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D J172_04440 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J172_04268 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J172_00955 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:xcf00564] D J172_00330 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D J172_00473 homodimeric glycerol 3-phosphate dehydrogenase (quinone) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D J172_04440 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J172_04268 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J172_00955 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J172_03333 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01141 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01601 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J172_04541 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J172_01272 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J172_02527 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D J172_02528 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D J172_00633 putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J172_01553 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J172_03740 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J172_02196 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J172_02901 phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D J172_02244 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J172_00626 Phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J172_00596 Phosphoserine phosphatase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D J172_04483 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J172_04321 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J172_00118 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J172_03045 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:xcf00565] D J172_01601 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J172_03333 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01141 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:xcf00600] D J172_02740 Glycosyltransferase, probably involved in cell wall biogenesis K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D J172_01303 O-Glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D J172_01443 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_04421 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_03251 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D J172_01601 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D J172_01601 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:xcf00592] D J172_01601 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:xcf01040] D J172_01516 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J172_00287 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J172_04127 Fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J172_04128 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D J172_00951 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J172_01376 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:xcf00230] D J172_01028 NTP pyrophosphohydrolase including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D J172_03244 ADP-ribose pyrophosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_01067 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J172_01148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J172_00623 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D J172_03137 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J172_01369 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D J172_03724 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D J172_03135 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D J172_02849 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D J172_02850 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D J172_00584 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D J172_01682 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J172_00625 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J172_02554 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J172_01739 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J172_01870 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J172_03391 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J172_01470 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D J172_02451 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J172_02165 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J172_03574 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D J172_03068 xanthine dehydrogenase, molybdenum binding subunit apoprotein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D J172_01315 xanthine dehydrogenase, molybdenum binding subunit apoprotein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D J172_03069 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D J172_01316 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D J172_03070 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D J172_01317 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D J172_02450 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J172_04387 GMP synthase - Glutamine amidotransferase domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J172_03570 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D J172_04243 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J172_04242 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J172_03568 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J172_01157 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D J172_03286 (p)ppGpp synthetase, RelA/SpoT family K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D J172_01465 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D J172_01284 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J172_00767 Sugar kinase, ribokinase family K00856 ADK; adenosine kinase [EC:2.7.1.20] D J172_00418 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D J172_02843 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D J172_03612 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J172_03242 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J172_00979 Bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D J172_03503 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J172_03504 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J172_00406 putative flavoprotein involved in K+ transport K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D J172_00405 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J172_00407 OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D J172_00409 putative urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5] D J172_00411 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D J172_00410 serine-pyruvate aminotransferase apoenzyme K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D J172_00415 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:xcf00240] D J172_02010 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J172_02008 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J172_03092 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J172_02523 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J172_01952 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D J172_04072 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D J172_04446 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D J172_01556 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D J172_02165 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J172_03242 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J172_02944 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D J172_01488 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D J172_01861 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D J172_02462 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D J172_01739 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J172_01870 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J172_02689 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D J172_02843 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D J172_00751 Cytosine/adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D J172_02913 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D J172_04243 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J172_04242 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J172_04183 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D J172_04082 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J172_04453 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D J172_00960 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J172_00667 Nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:xcf00250] D J172_01049 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J172_00357 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J172_00154 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_00162 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_01613 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_01571 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_02485 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D J172_03672 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J172_02515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J172_02509 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J172_01284 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J172_01682 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J172_03092 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J172_02636 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J172_00137 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J172_00136 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J172_02662 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J172_04058 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02010 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J172_02008 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J172_00827 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_03813 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_01148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:xcf00260] D J172_01967 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J172_03087 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J172_02896 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J172_03215 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J172_01968 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D J172_01970 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D J172_00591 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D J172_00857 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J172_02897 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J172_04533 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J172_03048 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J172_01991 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_00126 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_01792 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J172_01133 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J172_01139 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_01344 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J172_03238 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_03237 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D J172_03740 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J172_02196 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J172_00831 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D J172_00832 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D J172_03779 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J172_03778 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J172_03213 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J172_03630 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J172_00492 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J172_01949 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J172_02887 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J172_02889 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:xcf00270] D J172_03803 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J172_03515 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J172_03778 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J172_03779 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J172_01529 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D J172_01703 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_01704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_00446 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J172_00930 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J172_00598 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D J172_04093 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D J172_03391 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J172_02541 Cytosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D J172_01471 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D J172_01775 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D J172_01987 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D J172_01985 acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D J172_01986 acireductone dioxygenase apoprotein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J172_03793 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D J172_02367 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J172_00921 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J172_01967 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J172_03087 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J172_02896 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J172_03215 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J172_02496 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J172_03217 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J172_03216 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J172_01044 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J172_00842 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J172_03277 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J172_01730 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J172_01949 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J172_01124 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J172_03213 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J172_01991 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_00126 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_01792 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:xcf00280] D J172_01044 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J172_01486 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D J172_00561 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J172_00560 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J172_00558 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_00375 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J172_01451 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D J172_02437 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D J172_01447 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_02656 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J172_00373 Acetyl/propionyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D J172_00374 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D J172_02000 Enoyl-CoA hydratase/carnithine racemase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D J172_01998 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J172_03753 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J172_03752 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:xcf00290] D J172_03630 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J172_00492 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J172_03634 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J172_03633 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J172_03632 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D J172_03628 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J172_03629 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J172_03627 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J172_00457 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J172_01044 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J172_01486 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D J172_03672 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J172_03631 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:xcf00300] D J172_03215 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J172_01967 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J172_03087 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J172_02896 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J172_01905 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J172_02007 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D J172_01568 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D J172_03604 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J172_01570 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J172_00746 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J172_03354 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J172_02005 valine-pyruvate aminotransferase apoenzyme K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D J172_00891 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J172_00892 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:xcf00310] D J172_01955 NAD-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D J172_01677 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01610 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01949 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J172_02636 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J172_04020 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:xcf00220] D J172_02516 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9] D J172_02515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J172_02509 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J172_04178 arginase K01476 rocF; arginase [EC:3.5.3.1] D J172_04499 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D J172_04500 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02662 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J172_03672 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J172_02512 N-acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8] D J172_02510 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D J172_03604 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J172_02513 N-acetylcitrulline deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:xcf00330] D J172_00751 Cytosine/adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D J172_04092 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D J172_02467 putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D J172_04093 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D J172_00598 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D J172_02644 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_01120 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J172_02648 gamma-glutamylputrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D J172_04178 arginase K01476 rocF; arginase [EC:3.5.3.1] D J172_03102 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D J172_04058 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J172_02507 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J172_02506 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D J172_01026 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D J172_00803 2OG-Fe(II) oxygenase superfamily K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D J172_01487 2OG-Fe(II) oxygenase superfamily K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D J172_02387 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] C 00340 Histidine metabolism [PATH:xcf00340] D J172_01975 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D J172_01982 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D J172_01980 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D J172_01979 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D J172_01981 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D J172_01978 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01976 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D J172_01781 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D J172_01779 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D J172_01782 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D J172_01783 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D J172_01780 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_00293 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:xcf00350] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J172_00567 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J172_00568 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J172_03784 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D J172_03785 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_03348 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D J172_02636 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J172_03481 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:xcf00360] D J172_00281 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J172_00567 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J172_03863 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J172_02924 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J172_01434 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D J172_01120 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J172_03116 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D J172_00269 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:xcf00380] D J172_00563 Tryptophan 2,3-dioxygenase (vermilion) K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D J172_01743 Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9] D J172_01744 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D J172_01746 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D J172_01677 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01610 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_03601 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01120 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J172_01341 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_04198 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_04158 Catalase K03781 katE; catalase [EC:1.11.1.6] D J172_01434 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:xcf00400] D J172_00658 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J172_01118 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J172_03188 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D J172_04373 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D J172_00645 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D J172_04202 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D J172_03187 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D J172_01794 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D J172_02898 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D J172_00590 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J172_00592 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J172_00594 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D J172_02891 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D J172_00595 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D J172_02887 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J172_02889 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J172_03822 chorismate mutase, putative K04093 pheA1; chorismate mutase [EC:5.4.99.5] D J172_01793 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D J172_01667 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J172_00710 cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J172_00281 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J172_04272 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:xcf00410] D J172_01935 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01934 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J172_02656 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_01447 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:xcf00430] D J172_03626 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_02691 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_02662 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:xcf00450] D J172_03216 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J172_01703 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_01704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_00446 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J172_03778 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J172_03114 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D J172_01310 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J172_02153 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J172_03503 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J172_03504 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J172_01523 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:xcf00460] D J172_03253 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04038 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01586 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01940 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04404 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_03626 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_02691 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_01049 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J172_00357 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J172_00857 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:xcf00470] D J172_03862 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J172_00897 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J172_01949 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J172_04031 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D J172_00746 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J172_03354 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J172_03087 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J172_02387 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D J172_02722 Proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D J172_02719 putative NAD(FAD)-dependent dehydrogenase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D J172_02721 Glycine/D-amino acid oxidases (deaminating) K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-] D J172_02720 putative anaerobic dehydrogenase K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D J172_02718 Dihydrodipicolinate synthase/N-acetylneuraminate lyase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D J172_02717 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D J172_03863 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J172_02924 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:xcf00480] D J172_03626 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_02691 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_00842 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J172_03277 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J172_03731 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J172_04155 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J172_01012 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_04526 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01432 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02386 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01612 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_03377 Archaeal flagella assembly protein J K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01125 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01599 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02557 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02627 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_03987 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02923 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D J172_04003 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J172_00792 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J172_02221 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_04249 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_04520 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J172_01693 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J172_01595 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J172_01275 Peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D J172_04093 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:xcf00511] D J172_01443 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_04421 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J172_03251 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J172_03252 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D J172_01441 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J172_03249 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J172_01920 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] D J172_03268 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] D J172_01303 O-Glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:xcf00540] D J172_01546 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J172_00901 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J172_01548 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J172_01153 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J172_01545 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J172_02239 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J172_03143 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J172_01862 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J172_03144 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J172_02240 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J172_03640 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J172_03641 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J172_03958 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J172_00495 Aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D J172_00777 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D J172_01350 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J172_01220 Lipopolysaccharide kinase (Kdo/WaaP) family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D J172_03965 Lipid A core - O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:xcf00541] D J172_02455 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J172_03910 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J172_03912 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J172_01695 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_03756 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J172_04077 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J172_03759 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J172_03760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J172_03758 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J172_03757 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D J172_03755 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D J172_03820 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J172_00147 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J172_02256 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:xcf00550] D J172_03141 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J172_01951 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J172_00896 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J172_03084 UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53] D J172_03085 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23] D J172_00891 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J172_00897 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J172_00892 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J172_01554 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J172_00311 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_01155 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_00893 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J172_00895 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J172_03225 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J172_03560 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J172_03283 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J172_01273 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J172_00771 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J172_00890 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J172_00776 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:xcf00552] D J172_00311 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_01155 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_00149 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:xcf00543] D J172_01958 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D J172_01957 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD D J172_02751 Glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D J172_02748 Glycosyltransferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D J172_02753 Fucose 4-O-acetylase K13663 gumF; acyltransferase [EC:2.3.1.-] D J172_02755 Undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D J172_02746 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D J172_02750 Glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D J172_02752 Fucose 4-O-acetylase K13664 gumG; acyltransferase [EC:2.3.1.-] D J172_02747 Polysaccharide pyruvyl transferase K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:xcf00730] D J172_03622 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D J172_01898 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D J172_02737 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J172_03476 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D J172_03592 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D J172_00867 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D J172_03671 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J172_02932 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J172_03612 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:xcf00740] D J172_03960 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J172_00864 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J172_00860 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J172_04154 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D J172_00865 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D J172_00863 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D J172_01386 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D J172_00669 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_00929 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_04301 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J172_04543 Membrane-associated phospholipid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J172_00444 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J172_00969 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J172_01028 NTP pyrophosphohydrolase including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:xcf00750] D J172_03186 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D J172_01666 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D J172_01792 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J172_00982 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D J172_00116 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D J172_01970 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:xcf00760] D J172_02852 nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D J172_03697 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D J172_01739 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J172_01870 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J172_00785 cytidyltransferase-like domain K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D J172_02951 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D J172_03242 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J172_00615 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D J172_03395 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D J172_01883 competence/damage-inducible protein CinA C-terminal domain K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D J172_00786 Nicotinic acid phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D J172_01738 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D J172_01035 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J172_01040 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J172_01041 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D J172_02636 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:xcf00770] D J172_03628 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J172_03629 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J172_03627 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J172_00457 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J172_01933 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D J172_04236 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D J172_01934 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J172_04186 transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D J172_04083 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D J172_03242 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J172_02695 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D J172_03423 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D J172_04337 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D J172_01044 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J172_01935 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:xcf00780] D J172_00496 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D J172_01843 Methylase involved in ubiquinone/menaquinone biosynthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D J172_03800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_04254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_01254 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J172_01252 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00497 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00189 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_04259 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_02279 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_01547 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J172_00498 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D J172_00500 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J172_03245 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J172_03792 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D J172_00501 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D J172_04187 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:xcf00785] D J172_00779 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D J172_00780 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_00689 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J172_03836 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J172_01678 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J172_01677 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J172_00561 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J172_00560 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J172_00558 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J172_01344 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J172_03238 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J172_03237 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:xcf00790] D J172_04475 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D J172_01927 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D J172_02932 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J172_04334 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J172_04336 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J172_04039 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D J172_00798 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J172_01932 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J172_01879 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J172_00962 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J172_01145 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D J172_03960 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J172_00864 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J172_01255 aminodeoxychorismate synthase, component I, clade 2 K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D J172_03790 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J172_02267 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J172_00281 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J172_00799 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 PTR1; pteridine reductase [EC:1.5.1.33] D J172_03311 Organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J172_03309 transcriptional regulator/preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J172_04015 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J172_01222 cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J172_01223 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D J172_01225 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J172_01059 molybdenum cofactor biosynthesis protein B, proteobacterial K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D J172_02172 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D J172_02182 Molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D J172_03063 putative MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D J172_02183 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:xcf00670] D J172_00962 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J172_02452 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J172_00857 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J172_03137 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J172_00625 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J172_03968 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J172_03238 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J172_01703 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_01704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_00960 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J172_00434 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J172_00441 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J172_00907 5,10-methylenetetrahydrofolate reductase (NAD(P)) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J172_03586 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:xcf00860] D J172_03021 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J172_01062 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D J172_03595 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J172_04413 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J172_04208 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J172_00735 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D J172_00324 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D J172_03190 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D J172_04278 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D J172_01539 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D J172_04393 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D J172_00323 putative enzyme of heme biosynthesis K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D J172_03514 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D J172_02307 Uroporphyrinogen-III methylase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D J172_02309 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D J172_04047 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J172_04048 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J172_00988 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J172_03364 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J172_03361 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D J172_03363 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D J172_03362 L-threonine O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D J172_03360 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D J172_03357 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D J172_03359 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D J172_03358 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D J172_01274 Bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1] D J172_00606 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D J172_01576 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:xcf00130] D J172_04272 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D J172_00503 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J172_02540 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D J172_00990 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D J172_00755 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D J172_00991 2-octaprenyl-6-methoxyphenol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D J172_00600 Ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D J172_00303 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D J172_02385 Putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J172_00194 Putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J172_01053 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J172_03883 Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J172_00449 putative nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J172_00567 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:xcf00900] D J172_02737 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J172_01552 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D J172_01866 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D J172_01065 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D J172_01867 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D J172_01946 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D J172_01389 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_02935 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J172_03082 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J172_01554 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:xcf00907] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_03606 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13775 atuG; citronellol/citronellal dehydrogenase D J172_01998 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D J172_03546 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:xcf00523] D J172_03759 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J172_03760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J172_03758 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J172_03757 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:xcf01053] D J172_04091 amino acid adenylation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01055 Biosynthesis of vancomycin group antibiotics D J172_03760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:xcf00946] D J172_03253 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04038 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01586 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01940 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04404 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:xcf00996] D J172_01001 Enoyl-CoA hydratase/carnithine racemase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:xcf00311] D J172_00141 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J172_01575 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J172_03335 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:xcf00332] D J172_02507 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J172_02506 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:xcf00261] D J172_03503 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J172_03504 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J172_01967 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J172_03087 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J172_02896 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J172_01905 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J172_02007 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:xcf00521] D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03754 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_04081 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J172_02548 Archaeal fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J172_03759 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J172_03760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J172_03758 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J172_03757 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D J172_03247 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_02220 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J172_03293 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:xcf00525] D J172_03759 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J172_03760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:xcf00401] D J172_01667 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D J172_04217 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D J172_03171 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D J172_04445 2-polyprenyl-6-methoxyphenol hydroxylase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D J172_00590 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J172_00592 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D J172_01251 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_00679 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_01252 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00497 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00189 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_04259 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_02279 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D J172_01253 acyl carrier protein K02078 acpP; acyl carrier protein D J172_04270 Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:xcf00999] D J172_00930 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J172_04202 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D J172_03253 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04038 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01586 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_01940 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J172_04404 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:xcf00362] D J172_00483 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J172_00479 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D J172_00269 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D J172_00481 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D J172_00480 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D J172_00482 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D J172_00484 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D J172_04324 hypothetical protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D J172_04325 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D J172_04323 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D J172_00468 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J172_02163 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J172_01610 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:xcf00627] D J172_01120 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J172_01056 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J172_00466 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J172_00476 vanillate demethylase subunit A K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D J172_00475 vanillate demethylase subunit B K03863 vanB; vanillate monooxygenase ferredoxin subunit C 00364 Fluorobenzoate degradation [PATH:xcf00364] D J172_02909 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:xcf00625] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_04410 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J172_01000 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:xcf00361] D J172_02909 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:xcf00623] D J172_00466 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J172_02909 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:xcf00622] D J172_00466 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J172_00269 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:xcf00633] D J172_01498 NADH:flavin oxidoreductase, Old Yellow Enzyme family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D J172_02162 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:xcf00643] D J172_00568 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J172_03784 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D J172_03785 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D J172_01120 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J172_00477 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D J172_00478 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:xcf00791] D J172_04500 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D J172_04499 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:xcf00930] D J172_00661 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_04419 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_01453 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D J172_00269 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:xcf00626] D J172_02999 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J172_00764 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J172_00848 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D J172_00481 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D J172_00480 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:xcf03020] D J172_01083 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J172_01084 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J172_01114 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J172_03569 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:xcf03010] D J172_02461 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D J172_01559 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D J172_01096 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D J172_01113 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D J172_01107 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D J172_01765 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D J172_01086 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D J172_01104 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D J172_00602 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D J172_01089 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D J172_01112 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D J172_01085 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D J172_01111 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D J172_01103 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D J172_02855 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D J172_01425 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D J172_01099 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D J172_01766 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D J172_01094 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D J172_01384 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D J172_04041 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D J172_01079 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D J172_01093 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D J172_01090 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D J172_01091 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D J172_01102 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D J172_01105 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D J172_01081 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D J172_01767 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D J172_01080 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D J172_01078 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D J172_00601 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D J172_01100 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D J172_01109 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D J172_01097 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D J172_01115 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D J172_01106 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D J172_01428 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D J172_02763 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D J172_01381 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D J172_01095 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D J172_01092 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D J172_01101 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D J172_01068 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D J172_01382 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D J172_04327 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D J172_01098 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D J172_01108 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D J172_03564 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D J172_01248 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D J172_04326 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D J172_04548 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D J172_02764 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D J172_02463 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D J172_04065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04463 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J172_04459 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J172_04060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J172_04458 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:xcf00970] D J172_02581 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04133 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_02209 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_02211 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04064 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04462 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_00505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01167 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01896 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01956 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_02800 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J172_01207 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J172_01208 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J172_02246 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J172_00603 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J172_01066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J172_01930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_02208 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_02210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_01072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_02245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_02247 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_03473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_01168 tRNA-His K14226 tRNA-His; tRNA His D J172_04063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J172_04461 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J172_01585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02876 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01197 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J172_03310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J172_02861 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_03954 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_00604 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_02732 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J172_01166 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_02503 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_02758 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_01217 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01234 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01073 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_01390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_04184 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_01075 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J172_01071 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J172_01206 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_01259 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_02798 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_03021 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J172_00416 amidohydrolase, AtzE family K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J172_01011 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J172_01888 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J172_03327 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J172_01763 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J172_04384 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J172_04383 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J172_02767 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J172_01797 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J172_02518 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J172_01523 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J172_03968 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J172_03734 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J172_02954 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J172_01387 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J172_02023 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J172_04085 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J172_03742 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J172_01973 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J172_02762 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J172_02761 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J172_04066 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J172_04174 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:xcf03060] D J172_01110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J172_01076 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J172_02877 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J172_02678 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J172_02677 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J172_02679 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J172_04546 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J172_00904 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J172_00329 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J172_01422 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J172_01226 SRP_RNA K01983 ffs; SRP RNA D J172_02724 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J172_04391 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J172_04390 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J172_04389 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D J172_01458 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J172_01388 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:xcf04122] D J172_01730 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J172_02146 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J172_01225 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J172_01222 cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J172_01224 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D J172_01223 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D J172_01059 molybdenum cofactor biosynthesis protein B, proteobacterial K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D J172_03475 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:xcf03018] D J172_00605 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J172_02262 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J172_03997 Superfamily II DNA and RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J172_02854 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J172_03786 Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D J172_01709 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J172_02986 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J172_03297 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J172_03999 transcription termination factor Rho K03628 rho; transcription termination factor Rho D J172_01663 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J172_00655 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J172_01881 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J172_01158 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J172_01058 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J172_01931 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:xcf03030] D J172_01215 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J172_01543 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J172_01235 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J172_01257 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J172_02952 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J172_03733 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J172_00105 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J172_01615 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J172_04044 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_01214 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J172_01544 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:xcf03410] D J172_01725 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J172_03993 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J172_02725 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J172_02616 DNA-3-methyladenine glycosylase (3mg) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J172_04457 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J172_00719 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J172_01364 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J172_02995 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J172_03095 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J172_03878 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J172_02180 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_04071 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_04340 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_02013 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:xcf03420] D J172_03032 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J172_01380 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D J172_01314 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D J172_02799 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D J172_02243 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D J172_04319 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:xcf03430] D J172_01436 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J172_02568 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D J172_04319 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J172_01742 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D J172_02573 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J172_02934 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J172_02013 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_01543 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J172_00105 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J172_01235 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J172_02952 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J172_01257 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J172_01215 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J172_03733 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:xcf03440] D J172_02013 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_00106 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J172_01462 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J172_01237 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D J172_01886 RecA protein K03553 recA; recombination protein RecA D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_03322 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J172_03319 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J172_03323 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J172_03566 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J172_04510 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J172_04511 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J172_04507 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J172_01543 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J172_00105 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J172_01235 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J172_02952 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J172_01257 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J172_01215 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J172_03733 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J172_03986 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:xcf03450] D J172_00238 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku D J172_02578 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:xcf02010] D J172_01134 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J172_01135 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J172_01136 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J172_01137 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J172_03372 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00967 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00947 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J172_03371 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00966 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00945 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_03370 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00965 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00946 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_03532 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J172_03651 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D J172_03533 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D J172_03534 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J172_03658 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D J172_02643 Spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D J172_02637 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D J172_02638 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D J172_02639 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D J172_00290 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D J172_00289 ABC-type proline/glycine betaine transport systems, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J172_02222 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J172_04516 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D J172_04515 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J172_03747 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J172_04514 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J172_03745 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J172_04517 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D J172_04513 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J172_03746 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J172_01719 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_01720 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_01718 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D J172_01717 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D J172_01716 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J172_03842 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D J172_03843 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D J172_03844 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D J172_03777 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D J172_03776 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D J172_04219 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J172_04220 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J172_02232 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D J172_02233 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J172_02490 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D J172_01822 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D J172_02489 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J172_01823 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J172_02488 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D J172_02487 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D J172_03730 putative permease K07091 lptF; lipopolysaccharide export system permease protein D J172_03729 putative permease K11720 lptG; lipopolysaccharide export system permease protein D J172_03147 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J172_03995 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J172_03996 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J172_02238 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J172_02355 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J172_04381 ABC-type bacteriocin/lantibiotic exporters, containing an N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J172_02969 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J172_02498 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J172_02499 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:xcf02060] D J172_03155 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J172_03154 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D J172_03153 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J172_02667 Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D J172_02669 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J172_02668 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J172_03150 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:xcf03070] D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_02354 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J172_02355 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J172_02958 hypothetical protein K04057 yscP; type III secretion protein P D J172_00529 Type II secretory pathway, component PulD K03219 yscC; type III secretion protein C D J172_00523 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D J172_00516 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D J172_00515 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S D J172_00528 type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D J172_00520 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U D J172_00519 Type III secretory pathway, component EscV K03230 yscV; type III secretion protein V D J172_00526 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D J172_00517 type III secretion system apparatus protein YscQ/HrcQ K03225 yscQ; type III secretion protein Q D J172_00525 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D J172_00807 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D J172_03709 type II secretion system protein D K02453 gspD; general secretion pathway protein D D J172_00806 Type IV pilus biogenesis/PDZ domain K02452 gspC; general secretion pathway protein C D J172_00809 type II secretion system protein F (GspF) K02455 gspF; general secretion pathway protein F D J172_03718 Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D J172_00810 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D J172_03717 type II secretion system protein G K02456 gspG; general secretion pathway protein G D J172_00811 type II secretion system protein H (GspH) K02457 gspH; general secretion pathway protein H D J172_03716 type II secretion system protein H K02457 gspH; general secretion pathway protein H D J172_00812 type II secretion system protein I (GspI) K02458 gspI; general secretion pathway protein I D J172_03715 prepilin-type N-terminal cleavage/methylation domain K02458 gspI; general secretion pathway protein I D J172_00813 type II secretion system protein J (GspJ) K02459 gspJ; general secretion pathway protein J D J172_03714 hypothetical protein K02459 gspJ; general secretion pathway protein J D J172_00814 type II secretion system protein K (GspK) K02460 gspK; general secretion pathway protein K D J172_03713 Type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D J172_00815 type II secretion system protein L (GspL) K02461 gspL; general secretion pathway protein L D J172_03712 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D J172_00816 type II secretion system protein M (GspM) K02462 gspM; general secretion pathway protein M D J172_03711 Type II secretion system (T2SS), protein M subtype b K02462 gspM; general secretion pathway protein M D J172_00808 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_03719 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_04385 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_02678 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J172_02677 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J172_01076 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J172_02877 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J172_01110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J172_02679 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J172_04546 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J172_00904 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J172_02724 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J172_00329 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J172_01422 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J172_04391 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J172_04390 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J172_04389 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D J172_02790 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J172_00070 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J172_02789 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J172_00081 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J172_02788 Type IV secretory pathway, VirB3-like protein K03198 virB3; type IV secretion system protein VirB3 D J172_02786 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D J172_00078 Type IV secretion system protein K03200 virB5; type IV secretion system protein VirB5 D J172_02793 Type IV secretory pathway, VirB9 component K03204 virB9; type IV secretion system protein VirB9 D J172_00073 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D J172_02781 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_02785 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_00075 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_02794 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J172_00074 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J172_02792 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J172_00072 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J172_02787 type IV secretion/conjugal transfer ATPase, VirB4 family K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J172_00079 Type IV secretory pathway, VirB4 component K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J172_02791 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J172_00071 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J172_02796 Type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D J172_04293 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D J172_04313 Hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D J172_04288 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D J172_04289 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D J172_04308 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:xcf02020] D J172_01159 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J172_01160 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J172_02932 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J172_04334 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J172_04336 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J172_01719 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_01720 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_04192 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J172_04193 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J172_04543 Membrane-associated phospholipid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J172_01456 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J172_03028 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J172_03029 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D J172_00436 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J172_00435 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 baeR; two-component system, OmpR family, response regulator BaeR D J172_04017 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D J172_04018 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump D J172_04019 Cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump D J172_00437 RND family efflux transporter, MFP subunit K18321 smeA; membrane fusion protein, multidrug efflux system D J172_00438 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18322 smeB; multidrug efflux pump D J172_00439 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18323 smeC; outer membrane protein, multidrug efflux system D J172_02123 Flagellin K02406 fliC; flagellin D J172_02081 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J172_02056 Flagellar motor component K02556 motA; chemotaxis protein MotA D J172_03868 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J172_00874 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J172_00875 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J172_00871 K+-transporting ATPase, KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D J172_00872 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D J172_00873 K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D J172_03659 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J172_03660 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD D J172_04048 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J172_00104 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J172_01506 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D J172_04028 D-Ala-D-Ala dipeptidase vanX, Metallo peptidase, MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J172_03796 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D J172_00733 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J172_00734 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR D J172_04220 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J172_04219 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J172_02261 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J172_03164 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J172_01889 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D J172_03235 Beta-lactamase class C and other penicillin binding protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D J172_04162 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J172_04161 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR D J172_01562 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J172_01565 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J172_01560 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01564 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01563 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J172_01567 UTP--GlnB (protein PII) uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D J172_00313 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D J172_04098 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D J172_00315 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J172_00316 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_03647 Na+/H+-dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D J172_03413 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J172_03414 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J172_02117 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_03148 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_03420 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_03973 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J172_03419 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_01414 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_02037 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_03043 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_03900 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J172_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_00725 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_03938 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02044 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02042 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03304 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03625 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01891 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02046 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02047 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02144 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02319 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03388 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02615 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02049 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02043 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02053 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_03041 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02614 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02050 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02078 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03039 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02051 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02080 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_03451 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_01413 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_02035 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03044 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_02135 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J172_03273 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J172_03274 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J172_03272 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J172_03276 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J172_01279 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03275 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03271 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J172_03270 Chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC D J172_01814 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13589 cpdR; two-component system, cell cycle response regulator CpdR D J172_02115 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J172_02025 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J172_02024 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J172_00597 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J172_02026 Enoyl-CoA hydratase/carnithine racemase K13816 rpfF; DSF synthase D J172_01945 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D J172_01944 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D J172_02624 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D J172_02623 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J172_02622 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D J172_01829 Cytochrome c2 K08738 CYC; cytochrome c D J172_03159 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_02500 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_03905 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J172_03158 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_02501 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_03906 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J172_02502 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_02757 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein D J172_02241 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J172_00147 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J172_02690 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00458 Cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00726 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00134 Cellulase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00132 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_00133 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J172_02344 FecR family protein K07165 fecR; transmembrane sensor D J172_04299 FecR family protein K07165 fecR; transmembrane sensor D J172_02137 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:xcf04148] D J172_04178 arginase K01476 rocF; arginase [EC:3.5.3.1] D J172_02624 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:xcf02024] D J172_01881 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J172_00590 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J172_00592 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J172_00658 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J172_01118 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J172_00875 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J172_03164 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J172_03162 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_02535 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_03737 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J172_02026 Enoyl-CoA hydratase/carnithine racemase K13816 rpfF; DSF synthase D J172_00579 griselysin, Metallo peptidase, MEROPS family M04 K20273 zmpA; zinc metalloprotease ZmpA D J172_02027 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J172_02025 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J172_02024 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J172_00597 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J172_03020 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J172_03701 hypothetical protein K20326 xagA; protein XagA D J172_03700 Glycosyltransferase, probably involved in cell wall biogenesis K20327 xagB; glycosyltransferase XagB D J172_03699 hypothetical protein K20328 xagC; membrane protein XagC D J172_01943 Cellulase (glycosyl hydrolase family 5) K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J172_03960 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J172_00860 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J172_03016 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J172_00974 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J172_00975 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D J172_00976 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J172_00978 ATPase component of various ABC-type transport systems, containing duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D J172_04546 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J172_01045 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01046 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01047 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03720 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03722 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01076 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J172_02877 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J172_01110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J172_02679 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J172_00904 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J172_02724 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J172_00329 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J172_01422 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J172_03333 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01141 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:xcf02030] D J172_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_00725 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_03938 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02044 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02042 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03304 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03625 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01891 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02046 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02047 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02144 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02319 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03388 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02615 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02049 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02043 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02050 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02078 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03039 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02053 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_03041 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02614 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02051 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02080 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_03451 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02079 Chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D J172_01413 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_02035 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03044 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03900 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J172_02135 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J172_02036 Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D J172_01414 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_02037 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_03043 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_02101 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J172_02095 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J172_02094 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J172_02056 Flagellar motor component K02556 motA; chemotaxis protein MotA D J172_03868 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J172_02055 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_03869 Flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:xcf02040] D J172_02103 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D J172_02102 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J172_02101 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J172_02100 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J172_02099 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J172_02098 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D J172_02097 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D J172_02096 Flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D J172_02095 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J172_02094 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J172_02093 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J172_02092 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J172_02090 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J172_02089 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J172_02084 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J172_02085 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J172_02136 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D J172_02134 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D J172_02133 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D J172_02132 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D J172_02131 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D J172_02130 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D J172_02129 flagellar basal-body rod protein FlgG, Gram-negative bacteria K02392 flgG; flagellar basal-body rod protein FlgG D J172_02128 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D J172_02127 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D J172_02126 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D J172_02125 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D J172_02124 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D J172_02123 Flagellin K02406 fliC; flagellin D J172_02122 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D J172_02121 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D J172_02056 Flagellar motor component K02556 motA; chemotaxis protein MotA D J172_03868 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J172_02055 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_03869 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_02137 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D J172_03956 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D J172_02115 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J172_02117 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_03148 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_02081 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:xcf04980] D J172_00988 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J172_01703 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J172_01704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:xcf01501] D J172_04070 Na+/melibiose symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J172_01469 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J172_03336 Transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D J172_03235 Beta-lactamase class C and other penicillin binding protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D J172_03536 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J172_00174 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J172_03537 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J172_03335 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J172_03018 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02664 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_03502 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02214 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02665 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03501 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J172_03017 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03016 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_03560 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J172_00771 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J172_00890 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:xcf01502] D J172_04028 D-Ala-D-Ala dipeptidase vanX, Metallo peptidase, MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J172_00897 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J172_03862 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J172_00892 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J172_00893 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J172_00895 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:xcf01503] D J172_04192 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J172_04193 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J172_01350 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J172_01926 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_02569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_01456 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J172_00835 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J172_00836 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J172_03018 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02664 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_03502 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02214 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02665 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03501 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J172_03017 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_01546 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J172_01506 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:xcf01000] C 01001 Protein kinases [BR:xcf01001] D J172_00487 Serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J172_04296 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J172_00246 transcriptional regulator K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J172_00294 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J172_01404 Anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D J172_01159 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J172_04192 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J172_03028 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J172_00436 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J172_00874 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J172_03659 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J172_00843 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J172_04162 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J172_00733 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J172_00315 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J172_03413 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J172_02050 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02078 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03039 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03272 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J172_02025 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J172_01945 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:xcf01009] D J172_00921 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_01216 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:xcf01002] D J172_01388 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D J172_03422 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J172_02450 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J172_04387 GMP synthase - Glutamine amidotransferase domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J172_02646 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D J172_04381 ABC-type bacteriocin/lantibiotic exporters, containing an N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J172_02928 Cell wall-associated hydrolases (invasion-associated proteins) K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D J172_01148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J172_00137 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J172_00827 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_03813 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J172_00154 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_00162 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_01613 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_01571 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J172_03108 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D J172_03467 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D J172_00109 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein D J172_01349 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D J172_03802 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D J172_00358 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D J172_01594 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D J172_00579 griselysin, Metallo peptidase, MEROPS family M04 K20273 zmpA; zinc metalloprotease ZmpA D J172_02918 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J172_02919 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J172_02920 putative metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J172_03046 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J172_03886 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J172_04028 D-Ala-D-Ala dipeptidase vanX, Metallo peptidase, MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J172_00723 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D J172_03731 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J172_04155 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J172_04535 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_03160 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_01570 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J172_00411 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D J172_03104 Membrane protein related to metalloendopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J172_03542 Membrane protein related to metalloendopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J172_03951 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J172_01566 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J172_02716 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D J172_03579 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D J172_03581 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J172_03787 putative aminopeptidase K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] D J172_02936 Deuterolysin metalloprotease (M35) family K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D J172_01878 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J172_02562 Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D J172_01161 Putative Zn-dependent protease, contains TPR repeats K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D J172_01551 site-2 protease, Metallo peptidase, MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D J172_03536 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J172_00174 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J172_01151 peptidyl-Asp metalloendopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D J172_04189 hypothetical protein K09933 mtfA; MtfA peptidase D J172_01456 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J172_04149 periplasmic serine protease, Do/DeqQ family K04772 degQ; serine protease DegQ [EC:3.4.21.-] D J172_03168 arginyl peptidase, Serine peptidase, MEROPS family S01A K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D J172_01045 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01046 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01047 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03720 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03722 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_00740 Serine proteases of the peptidase family S9A K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D J172_04212 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J172_00743 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D J172_00776 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J172_01202 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J172_01204 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D J172_01885 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J172_01324 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J172_01458 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J172_01026 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D J172_00781 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J172_00127 C-terminal processing peptidase-3, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J172_00141 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J172_01575 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J172_03981 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D J172_02707 putative protease K08677 kscP; kumamolisin [EC:3.4.21.123] D J172_02921 putative membrane protein K07059 K07059; rhomboid family protein D J172_00749 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D J172_00357 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J172_03626 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_02691 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J172_00415 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D J172_02938 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 K03592 pmbA; PmbA protein D J172_02940 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 K03568 tldD; TldD protein D J172_00226 putative Zn-dependent proteases and their inactivated-like protein K03568 tldD; TldD protein D J172_00227 putative Zn-dependent proteases and their inactivated-like protein K03568 tldD; TldD protein D J172_01270 Large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin D J172_01282 Membrane protease subunits, stomatin/prohibitin-like protein K04087 hflC; modulator of FtsH protease HflC D J172_01281 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:xcf01003] D J172_02740 Glycosyltransferase, probably involved in cell wall biogenesis K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D J172_00539 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D J172_03693 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D J172_03225 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J172_01273 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J172_03283 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J172_03560 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J172_00149 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D J172_00731 Membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D J172_03700 Glycosyltransferase, probably involved in cell wall biogenesis K20327 xagB; glycosyltransferase XagB D J172_02755 Undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D J172_02746 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D J172_02751 Glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D J172_02748 Glycosyltransferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D J172_02750 Glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D J172_01958 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D J172_03386 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:xcf01005] D J172_01546 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J172_01545 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J172_00901 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J172_01548 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J172_01153 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J172_02239 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J172_03641 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J172_03958 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J172_00495 Aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D J172_00777 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D J172_03640 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J172_01350 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J172_01220 Lipopolysaccharide kinase (Kdo/WaaP) family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D J172_01862 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J172_02240 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J172_03144 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J172_03143 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J172_03965 Lipid A core - O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D J172_01219 ADP-heptose:LPS heptosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D J172_03224 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:xcf01011] D J172_03141 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J172_01951 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J172_00896 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J172_00891 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J172_00897 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J172_03862 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J172_00893 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J172_00895 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J172_00311 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_01155 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J172_01385 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D J172_03560 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J172_03283 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J172_01273 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J172_00771 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J172_00890 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J172_00776 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J172_03225 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J172_04028 D-Ala-D-Ala dipeptidase vanX, Metallo peptidase, MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J172_02928 Cell wall-associated hydrolases (invasion-associated proteins) K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D J172_03104 Membrane protein related to metalloendopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J172_03542 Membrane protein related to metalloendopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J172_03736 Soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J172_00774 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J172_03401 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J172_00041 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J172_01211 Transglycosylase SLT domain/LysM domain K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D J172_02902 Soluble lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D J172_01256 conserved hypothetical protein, YceG family K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D J172_00775 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J172_01926 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_02569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:xcf01004] D J172_01251 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_00679 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J172_01249 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_02112 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_02743 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J172_03800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_04254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J172_01254 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J172_01252 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00497 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_00189 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_04259 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_02279 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J172_03799 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D J172_01547 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J172_00247 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J172_00951 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J172_01376 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D J172_01516 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J172_00287 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J172_04127 Fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J172_04349 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J172_02027 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J172_00999 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J172_04440 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J172_04268 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:xcf01008] D J172_04091 amino acid adenylation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01006 Prenyltransferases [BR:xcf01006] D J172_02935 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J172_03082 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J172_01554 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J172_01880 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J172_00503 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J172_04047 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:xcf01007] D J172_03021 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J172_01011 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J172_02563 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J172_04066 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J172_04174 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J172_02518 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J172_04085 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J172_01523 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J172_01387 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J172_03734 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J172_02954 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J172_02023 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J172_03327 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J172_01763 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J172_01973 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J172_04384 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J172_04383 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J172_01797 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J172_03742 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J172_02767 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J172_01888 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J172_02762 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J172_02761 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J172_03672 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J172_00230 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J172_02486 Aspartate/tyrosine/aromatic aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D J172_01977 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01771 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_03598 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J172_01133 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J172_00500 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J172_02656 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J172_03604 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J172_02644 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J172_03245 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J172_03595 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J172_04413 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J172_01044 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J172_01792 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J172_00410 serine-pyruvate aminotransferase apoenzyme K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:xcf00194] D J172_03823 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J172_03824 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J172_03825 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J172_03826 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J172_03827 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J172_03828 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J172_03829 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J172_03830 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:xcf03000] D J172_02367 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J172_00467 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D J172_02391 transcriptional regulator, AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT D J172_03620 transcriptional regulator K07506 K07506; AraC family transcriptional regulator D J172_02316 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D J172_02995 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J172_04230 transcriptional regulator, AraC family with amidase-like domain K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D J172_02964 Transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D J172_00998 transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D J172_00443 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D J172_02321 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D J172_01672 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J172_01022 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J172_03306 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D J172_04322 Transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D J172_03336 Transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D J172_01619 Transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D J172_02890 transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D J172_00474 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D J172_00274 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_02477 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_00826 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_01699 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_03484 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_04399 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_04442 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J172_02666 transcriptional regulator, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D J172_01784 histidine utilization repressor, proteobacterial K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D J172_00824 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D J172_00995 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D J172_00360 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D J172_03637 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J172_01288 transcriptional regulator, TetR family K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D J172_04129 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D J172_03864 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J172_00282 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J172_03164 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J172_04476 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D J172_01812 Transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D J172_01593 Transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D J172_00391 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D J172_03176 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D J172_01659 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J172_03020 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J172_00486 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D J172_00597 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J172_01972 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D J172_01446 transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D J172_01535 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D J172_02187 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D J172_03537 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J172_04187 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D J172_00634 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J172_01261 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D J172_00295 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D J172_02115 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J172_00766 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D J172_04532 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator D J172_04222 transcriptional regulator K07729 K07729; putative transcriptional regulator D J172_04058 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J172_00847 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D J172_02478 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D J172_00088 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J172_04075 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J172_01661 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D J172_01904 Glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor D J172_01021 Transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D J172_02329 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J172_02356 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J172_02448 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J172_01759 negative transcriptional regulator, PaiB family K07734 paiB; transcriptional regulator D J172_03094 Putative transcriptional regulator K07735 algH; putative transcriptional regulator D J172_02521 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J172_00858 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D J172_00887 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:xcf03021] D J172_01114 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J172_01083 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J172_01084 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J172_03569 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J172_03956 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D J172_02987 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J172_01518 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J172_01826 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J172_04157 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J172_01454 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J172_03992 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D J172_02117 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_03148 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J172_02081 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J172_02859 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D J172_00866 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D J172_01077 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D J172_02621 Glutathione S-transferase K03599 sspA; stringent starvation protein A D J172_02620 Stringent starvation protein B K03600 sspB; stringent starvation protein B D J172_01404 Anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D J172_01403 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17762 rsbS; rsbT antagonist protein RsbS D J172_01402 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17763 rsbR; rsbT co-antagonist protein RsbR D J172_00685 HAMP domain/Cache domain/Stage II sporulation protein E (SpoIIE) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D J172_02521 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J172_02011 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D J172_02907 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D J172_03999 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:xcf03019] D J172_02262 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J172_02943 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D J172_01460 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J172_01709 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J172_02550 Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J172_02189 Oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D J172_03997 Superfamily II DNA and RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J172_03786 Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D J172_02986 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J172_03297 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J172_02854 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J172_03999 transcription termination factor Rho K03628 rho; transcription termination factor Rho D J172_01663 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J172_00655 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J172_01881 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J172_01158 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J172_01058 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J172_01931 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D J172_00605 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J172_01889 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D J172_02980 RraA famliy K02553 rraA; regulator of ribonuclease activity A D J172_03152 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ D J172_03295 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D J172_00403 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:xcf03011] D J172_02461 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D J172_01559 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D J172_01096 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D J172_01113 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D J172_01107 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D J172_01765 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D J172_01086 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D J172_01104 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D J172_00602 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D J172_01089 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D J172_01112 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D J172_01085 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D J172_01111 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D J172_01103 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D J172_02855 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D J172_01425 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D J172_01099 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D J172_01766 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D J172_01094 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D J172_01384 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D J172_04041 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D J172_03000 SSU ribosomal protein S31P K19033 PSRP4; 30S ribosomal protein S31 D J172_01079 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D J172_01093 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D J172_01090 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D J172_01091 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D J172_01102 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D J172_01105 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D J172_01767 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D J172_01080 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D J172_01078 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D J172_01081 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D J172_00601 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D J172_01100 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D J172_01109 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D J172_01097 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D J172_01115 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D J172_01106 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D J172_01428 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D J172_02763 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D J172_01381 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D J172_01095 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D J172_01092 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D J172_01101 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D J172_01382 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D J172_04327 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D J172_01098 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D J172_01108 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D J172_03564 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D J172_01248 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D J172_04326 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D J172_04548 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D J172_02764 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D J172_02463 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D J172_01068 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D J172_04060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J172_04458 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J172_04065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04463 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J172_04459 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:xcf03009] D J172_01460 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J172_00487 Serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J172_02189 Oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D J172_01461 GTP-binding protein Era K03595 era; GTPase D J172_01383 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D J172_02521 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J172_02859 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D J172_00866 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D J172_01077 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D J172_03853 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D J172_00981 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D J172_03967 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D J172_03854 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D J172_02696 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D J172_03246 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J172_04333 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J172_00888 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D J172_00882 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D J172_01711 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D J172_01877 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D J172_02948 rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D J172_04537 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D J172_03030 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D J172_01737 23S rRNA m(2)G-2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D J172_01007 putative SAM-dependent methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D J172_02166 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D J172_01464 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D J172_04493 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J172_02482 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J172_01131 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J172_02263 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D J172_03392 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J172_00400 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D J172_02984 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D J172_03302 16S rRNA uridine-516 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D J172_03490 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D J172_03738 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D J172_03269 [SSU ribosomal protein S5P]-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D J172_03431 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D J172_01426 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D J172_02908 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D J172_00639 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D J172_02899 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D J172_01680 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D J172_02262 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J172_02943 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D J172_03093 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D J172_02553 Superfamily II DNA and RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D J172_02986 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J172_03671 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J172_02171 ribosome-associated GTPase EngA K03977 engA; GTPase D J172_01882 GTP-binding protein HflX K03665 hflX; GTPase D J172_03976 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J172_03568 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J172_02857 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D J172_02860 hypothetical protein K09748 rimP; ribosome maturation factor RimP D J172_02989 hypothetical protein K14761 rlbA; ribosome-associated protein D J172_02950 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D J172_02631 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor D J172_01876 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein D J172_02939 hypothetical protein K09889 yjgA; ribosome-associated protein D J172_03149 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor D J172_01070 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D J172_01247 putative metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:xcf03016] D J172_02550 Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J172_00830 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D J172_04135 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D J172_03021 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J172_03742 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J172_01387 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J172_02954 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J172_01523 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J172_01011 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J172_04085 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J172_02023 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J172_03327 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J172_01888 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J172_01763 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J172_02767 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J172_01797 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J172_02518 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J172_03734 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J172_01973 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J172_02762 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J172_02761 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J172_04066 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J172_04174 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J172_03957 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D J172_01238 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J172_03477 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D J172_02892 tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D J172_02856 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D J172_01868 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D J172_03976 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J172_01880 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J172_04544 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D J172_00490 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J172_03243 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J172_04547 ribonuclease P protein component, eubacterial K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D J172_00883 RNase_P_RNA K01978 rnpB; M1 RNA D J172_01713 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D J172_03572 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D J172_02576 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D J172_01502 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D J172_04482 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D J172_00855 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D J172_04384 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J172_04383 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J172_02563 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J172_01048 transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D J172_02188 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D J172_04195 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D J172_00933 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D J172_02628 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D J172_01427 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D J172_03490 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D J172_02547 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D J172_00338 putative rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D J172_00353 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D J172_04493 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J172_02146 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J172_04397 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D J172_01764 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D J172_02223 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D J172_02681 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D J172_03309 transcriptional regulator/preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J172_03790 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J172_03311 Organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J172_04015 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J172_02572 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D J172_00442 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D J172_02680 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D J172_02933 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D J172_03280 tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D J172_04040 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D J172_02570 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D J172_01606 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D J172_01709 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J172_02854 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J172_00093 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:xcf03012] D J172_02858 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D J172_02766 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D J172_03338 ATPase component of ABC transporter with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D J172_01558 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D J172_01074 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01088 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01087 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D J172_01061 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D J172_01555 ribosome recycling factor K02838 frr; ribosome recycling factor D J172_01025 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D J172_01069 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D J172_02150 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D J172_02543 translation elongation factor P K02356 efp; elongation factor P D J172_01996 translation elongation factor P (EF-P) K02356 efp; elongation factor P D J172_01773 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D J172_02544 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D J172_02022 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D J172_03220 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D J172_00355 Protein chain release factor B K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:xcf03110] D J172_02149 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D J172_03369 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D J172_01203 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D J172_00750 ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_01663 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J172_01494 hypothetical protein K04046 yegD; hypothetical chaperone protein D J172_00655 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J172_01664 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D J172_01277 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D J172_03226 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33 D J172_01662 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D J172_01276 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D J172_01433 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D J172_00654 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D J172_01456 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J172_01878 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J172_03830 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J172_01560 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01564 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_00329 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J172_01378 hypothetical protein K09796 pccA; periplasmic copper chaperone A D J172_01045 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01046 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_01047 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03720 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03722 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J172_03251 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J172_01123 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D J172_01209 Parvulin-like peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D J172_02258 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D J172_01694 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D J172_02926 FKBP-type peptidyl prolyl cis-trans isomerase/Apo-metallochaperone SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J172_01495 FKBP-type peptidyl prolyl cis-trans isomerase/Apo-metallochaperone SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J172_00983 periplasmic chaperone for outer membrane proteins SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D J172_03998 thioredoxin K03671 TXN; thioredoxin D J172_04240 Thioredoxin K03671 TXN; thioredoxin D J172_00214 Thioredoxin K03671 TXN; thioredoxin D J172_01410 Thioredoxin domain-containing protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D J172_02956 thioredoxin K05838 ybbN; putative thioredoxin D J172_01162 Glutaredoxin, GrxC family K03676 grxC; glutaredoxin 3 D J172_02847 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J172_03677 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J172_00835 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J172_00836 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J172_01116 Thiol:disulfide interchange protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D J172_03725 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J172_02493 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D J172_01819 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:xcf04131] D J172_02165 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_03526 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J172_03048 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J172_03519 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:xcf03051] D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:xcf03032] D J172_01214 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J172_02367 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J172_01205 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J172_02760 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J172_02460 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J172_00104 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J172_01615 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J172_04044 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_01543 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J172_00105 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J172_03733 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J172_02952 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J172_01257 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J172_01215 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J172_01235 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J172_01544 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J172_03132 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D J172_01776 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J172_00108 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J172_01579 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J172_01859 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J172_03975 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J172_00139 Topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J172_02366 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:xcf03036] D J172_02367 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J172_01460 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_03743 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D J172_01205 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J172_02760 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J172_02460 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J172_01277 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D J172_00104 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J172_03296 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein D J172_00634 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J172_01881 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J172_03306 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D J172_03864 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J172_00282 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J172_01768 condensin subunit Smc K03529 smc; chromosome segregation protein D J172_02480 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D J172_02481 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D J172_00899 cell division protein FtsA K03590 ftsA; cell division protein FtsA D J172_01865 cell division protein FtsB K05589 ftsB; cell division protein FtsB D J172_03996 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J172_00890 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J172_02154 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J172_00889 cell division protein FtsL K03586 ftsL; cell division protein FtsL D J172_00898 Cell division septal protein K03589 ftsQ; cell division protein FtsQ D J172_00894 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D J172_03995 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J172_00900 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J172_01769 cell division protein ZipA K03528 zipA; cell division protein ZipA D J172_03584 cell division protein ZapA K09888 zapA; cell division protein ZapA D J172_03583 TIGR02449 family protein K09892 zapB; cell division protein ZapB D J172_00390 putative ATPase K06916 zapE; cell division protein ZapE D J172_01926 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_02569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_03018 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02664 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_03502 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02214 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_01358 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J172_01357 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J172_01356 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J172_00768 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J172_00769 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D J172_00770 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D J172_00772 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D J172_00013 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J172_02054 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_00089 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_00052 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J172_00299 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_04074 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D J172_00088 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J172_04075 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J172_01579 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J172_01859 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J172_00490 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J172_04333 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J172_00748 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D J172_03726 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D J172_02914 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D J172_00342 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D J172_00839 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:xcf03400] D J172_02996 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J172_01616 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D J172_03993 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J172_02616 DNA-3-methyladenine glycosylase (3mg) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J172_02725 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J172_01725 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J172_03530 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D J172_02194 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J172_00905 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J172_04082 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J172_01468 Uncharacterized protein related to deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D J172_03878 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J172_01364 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J172_02995 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J172_03095 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J172_04457 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J172_00719 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J172_02180 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_04071 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_04340 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J172_03049 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D J172_02013 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J172_01772 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J172_04279 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J172_01380 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D J172_01314 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D J172_02799 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D J172_02243 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D J172_02730 Excinuclease Cho K05984 cho; excinuclease Cho [EC:3.1.25.-] D J172_04319 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J172_01083 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J172_01084 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J172_01114 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J172_03569 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J172_03032 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J172_01436 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J172_02568 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D J172_01742 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D J172_02573 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J172_02934 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J172_01543 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J172_00105 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J172_03733 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J172_02952 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J172_01257 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J172_01215 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J172_01235 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_04510 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J172_04511 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J172_04507 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J172_01886 RecA protein K03553 recA; recombination protein RecA D J172_03322 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J172_03319 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J172_03323 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J172_03986 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D J172_01396 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D J172_00106 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J172_03566 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J172_01462 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J172_01237 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D J172_01660 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D J172_04396 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC D J172_04011 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D J172_02903 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D J172_00238 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku D J172_02578 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D J172_01776 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J172_00108 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J172_03975 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J172_00139 Topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J172_01205 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J172_00634 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J172_02760 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J172_02460 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J172_03297 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J172_03743 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D J172_03798 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D J172_01885 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J172_01324 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J172_01325 hypothetical protein K14160 imuA; protein ImuA D J172_01326 Nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB D J172_01327 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D J172_01887 hypothetical protein K03565 recX; regulatory protein D J172_04452 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D J172_02421 Superfamily I DNA and RNA helicase K03658 helD; DNA helicase IV [EC:5.6.2.4] D J172_04199 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D J172_03281 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D J172_01475 DEXH box helicase, DNA ligase-associated K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D J172_02617 ATP dependent helicase, Lhr family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D J172_04243 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J172_04242 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:xcf03029] D J172_02623 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J172_02858 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D J172_02766 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D J172_01558 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D J172_01074 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01088 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01087 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D J172_01461 GTP-binding protein Era K03595 era; GTPase D J172_04066 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J172_02954 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J172_03327 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J172_04085 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J172_00416 amidohydrolase, AtzE family K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J172_03939 DNA/RNA endonuclease G, NUC1 K01173 ENDOG; endonuclease G, mitochondrial D J172_04205 DNA/RNA endonuclease G, NUC1 K01173 ENDOG; endonuclease G, mitochondrial D J172_02364 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J172_03081 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J172_01550 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D J172_01663 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J172_01662 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D J172_00655 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J172_00654 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D J172_01664 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D J172_02847 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J172_03677 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J172_02914 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D J172_04047 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J172_04053 Cytochrome oxidase assembly factor K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D J172_04048 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J172_04546 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J172_04050 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D J172_02900 putative protein SCO1/SenC/PrrC K07152 SCO1; protein SCO1 D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:xcf02000] D J172_02238 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J172_02355 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J172_04381 ABC-type bacteriocin/lantibiotic exporters, containing an N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J172_02969 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J172_01673 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J172_03914 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J172_01597 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J172_02498 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J172_02499 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D J172_00160 ABC-type multidrug transport system, ATPase and permease component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D J172_01849 ABC-type multidrug transport system, ATPase and permease component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D J172_02552 ATPase component of ABC transporter with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein D J172_01671 ABC-type bacteriocin/lantibiotic exporters, containing an N-terminal double-glycine peptidase domain K02021 ABC.MR; putative ABC transport system ATP-binding protein D J172_01134 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J172_01135 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J172_01136 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J172_01137 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J172_03532 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J172_03651 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D J172_03533 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D J172_03534 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J172_03372 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00967 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J172_00947 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J172_03371 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00966 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_00945 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J172_03370 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00965 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_00946 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J172_03658 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D J172_02643 Spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D J172_02637 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D J172_02638 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D J172_02639 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D J172_00290 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D J172_00289 ABC-type proline/glycine betaine transport systems, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J172_02222 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J172_04515 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J172_03747 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J172_04514 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J172_03745 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J172_04513 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J172_03746 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J172_03748 ABC-type uncharacterized transport system, auxiliary component K18480 linN; cholesterol transport system auxiliary component D J172_04516 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D J172_04517 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D J172_02474 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D J172_02473 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D J172_02472 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D J172_01719 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_01720 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J172_01718 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D J172_01717 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D J172_01716 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J172_03842 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D J172_03843 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D J172_03844 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D J172_00974 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J172_00975 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D J172_00976 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J172_00978 ATPase component of various ABC-type transport systems, containing duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D J172_00286 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D J172_03777 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D J172_03776 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D J172_03730 putative permease K07091 lptF; lipopolysaccharide export system permease protein D J172_03729 putative permease K11720 lptG; lipopolysaccharide export system permease protein D J172_03147 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J172_04219 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J172_04220 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J172_02232 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D J172_02233 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J172_02490 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D J172_01822 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D J172_02489 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J172_01823 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J172_02488 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D J172_02487 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D J172_03995 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J172_03996 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J172_01689 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D J172_03927 protein of unknown function (DUF3526) K01992 ABC-2.P; ABC-2 type transport system permease protein D J172_03928 protein of unknown function (DUF3526)/ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D J172_04233 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D J172_03874 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D J172_01690 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J172_03929 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J172_04232 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J172_03875 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J172_03816 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J172_03817 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J172_04165 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J172_04166 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J172_00949 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J172_03815 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J172_04164 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J172_00950 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J172_03112 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D J172_04045 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J172_03982 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D J172_01430 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D J172_01923 MFS transporter, sugar porter (SP) family K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D J172_01700 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D J172_04363 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D J172_03650 Arabinose efflux permease K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D J172_04481 Arabinose efflux permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D J172_00215 Arabinose efflux permease K03762 proP; MFS transporter, MHS family, proline/betaine transporter D J172_01948 Arabinose efflux permease K03762 proP; MFS transporter, MHS family, proline/betaine transporter D J172_04426 Nitrate/nitrite transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D J172_00461 Arabinose efflux permease K26744 vanK; MFS transporter, AAHS family, vanillate permease D J172_02390 Cyanate permease K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D J172_02504 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D J172_04070 Na+/melibiose symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J172_04467 Arabinose efflux permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D J172_01347 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D J172_01499 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J172_03010 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J172_01584 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D J172_02641 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D J172_00427 Arabinose efflux permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D J172_01850 Arabinose efflux permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D J172_03155 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J172_03154 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D J172_02667 Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D J172_02669 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J172_03153 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J172_03150 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D J172_00472 MIP family channel protein K02440 glpF; glycerol uptake facilitator D J172_03605 Kef-type K+ transport systems, predicted NAD-binding component K10716 kch; voltage-gated potassium channel D J172_03183 Kef-type K+ transport systems, predicted NAD-binding component K10716 kch; voltage-gated potassium channel D J172_00314 ammonium transporter K03320 amt; ammonium transporter, Amt family D J172_01012 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_04526 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01432 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02386 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01612 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_03377 Archaeal flagella assembly protein J K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01125 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_01599 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02557 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02627 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_03987 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J172_02621 Glutathione S-transferase K03599 sspA; stringent starvation protein A D J172_03549 DNA uptake lipoprotein K07114 yfbK; Ca-activated chloride channel homolog D J172_03550 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D J172_03482 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D J172_00534 Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel D J172_02190 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D J172_03156 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter D J172_04246 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter D J172_02056 Flagellar motor component K02556 motA; chemotaxis protein MotA D J172_03868 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J172_02055 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_03869 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_02236 Biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D J172_00113 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D J172_02237 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J172_00114 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J172_00115 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J172_03317 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D J172_03316 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D J172_00715 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter D J172_02635 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter D J172_02160 camphor resistance protein CrcB K06199 crcB; fluoride exporter D J172_03609 putative membrane protein K08994 yneE; ion channel-forming bestrophin family protein D J172_01854 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J172_01684 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J172_03661 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J172_03648 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J172_01721 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J172_01129 Outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J172_00123 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D J172_01563 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J172_03474 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D J172_03796 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D J172_03117 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D J172_03349 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D J172_03367 TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter D J172_03675 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J172_00283 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J172_03544 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J172_00940 TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D J172_03705 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_04542 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_01268 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03002 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_01409 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_00829 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03789 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03228 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03248 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03619 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03624 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03926 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03339 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03341 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03342 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03375 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_04228 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_02336 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03735 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_01140 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_01573 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_00231 Outer membrane receptor for Fe3+-dicitrate K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03383 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03509 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_00970 Outer membrane receptor for Fe3+-dicitrate K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_03602 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_02774 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J172_04330 Outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_01625 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D J172_03016 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J172_00439 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18323 smeC; outer membrane protein, multidrug efflux system D J172_02757 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein D J172_02670 porin, OprB family K07267 oprB; porin D J172_01550 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D J172_02170 Beta-barrel assembly machine subunit BamB K17713 bamB; outer membrane protein assembly factor BamB D J172_03393 Beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD D J172_01658 Beta-barrel assembly machine subunit BamE K06186 bamE; outer membrane protein assembly factor BamE D J172_04376 autotransporter secretion outer membrane protein TamA K07278 tamA; translocation and assembly module TamA D J172_04375 autotransporter secretion inner membrane protein TamB K09800 tamB; translocation and assembly module TamB D J172_03721 Head domain of trimeric autotransporter adhesin/Coiled stalk of trimeric autotransporter adhesin/Extended Signal Peptide of Type V secretion system K21449 ata; trimeric autotransporter adhesin D J172_03723 Autotransporter adhesin K21449 ata; trimeric autotransporter adhesin D J172_03146 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D J172_03145 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D J172_00984 Organic solvent tolerance protein OstA K04744 lptD; LPS-assembly protein D J172_02953 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D J172_03690 Tfp pilus assembly protein PilF K20543 bcsC; cellulose synthase operon protein C D J172_02633 Putative Mg2+ and Co2+ transporter CorC K06189 corC; hemolysin (HlyC) family protein D J172_03666 Major Facilitator Superfamily K16211 malY; maltose/moltooligosaccharide transporter D J172_02770 Major Facilitator Superfamily K16211 malY; maltose/moltooligosaccharide transporter D J172_00713 D-serine/D-alanine/glycine:proton symporter, AAT family K11737 cycA; D-serine/D-alanine/glycine transporter D J172_01528 S-methylmethionine:proton symporter, AAT family K16235 mmuP; S-methylmethionine transporter D J172_02526 ethanolamine:proton symporter, EAT family K16238 eat; ethanolamine permease D J172_01452 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J172_02265 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D J172_02297 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D J172_04328 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D J172_02665 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03501 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J172_03017 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_00438 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18322 smeB; multidrug efflux pump D J172_01623 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K19585 oqxB; multidrug efflux pump D J172_04018 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump D J172_04019 Cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump D J172_00599 Membrane transporter of cations and cationic drugs K11741 sugE; quaternary ammonium compound-resistance protein SugE D J172_02382 putative permease, DMT superfamily K11939 rhtA; inner membrane transporter RhtA D J172_04168 putative permease K05786 rarD; chloramphenicol-sensitive protein RarD D J172_03241 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D J172_00447 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D J172_00833 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D J172_04346 putative symporter K14393 actP; cation/acetate symporter D J172_03647 Na+/H+-dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D J172_03876 sodium/proton antiporter, CPA1 family K24163 nhaK; monovalent cation/hydrogen antiporter D J172_02454 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D J172_04248 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D J172_03344 Kef-type potassium/proton antiporter, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter D J172_02978 transporter, CPA2 family K26731 CHX; K+:H+ antiporter D J172_00363 transporter, CPA2 family K26731 CHX; K+:H+ antiporter D J172_03380 Permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J172_00419 Permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J172_04464 benzoate transporter K05782 benE; benzoate membrane transport protein D J172_02998 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D J172_00727 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family D J172_02186 NRAMP (natural resistance-associated macrophage protein) metal ion transporter K03322 mntH; manganese transport protein D J172_00576 multisubunit potassium/proton antiporter, PhaA subunit K05559 phaA; multicomponent K+:H+ antiporter subunit A D J172_00575 multisubunit potassium/proton antiporter, PhaC subunit K05560 phaC; multicomponent K+:H+ antiporter subunit C D J172_00574 multisubunit potassium/proton antiporter, PhaD subunit K05561 phaD; multicomponent K+:H+ antiporter subunit D D J172_00573 multisubunit potassium/proton antiporter, PhaE subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E D J172_00572 multisubunit potassium/proton antiporter, PhaF subunit K05563 phaF; multicomponent K+:H+ antiporter subunit F D J172_00571 multisubunit potassium/proton antiporter, PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G D J172_01385 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D J172_00298 putative permease K24180 mleP; malate permease and related proteins D J172_03321 K+ transporter K03549 kup; KUP system potassium uptake protein D J172_03305 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D J172_00664 hypothetical protein K09125 yhhQ; queuosine precursor transporter D J172_01531 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D J172_00894 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D J172_04365 putative membrane protein K23242 mntP; manganese efflux pump family protein D J172_03055 Carbon starvation protein, predicted membrane protein K23676 btsT; pyruvate/proton symporter D J172_02266 TonB family C-terminal domain K03832 tonB; periplasmic protein TonB D J172_02947 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J172_04218 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J172_03278 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J172_01795 TonB family C-terminal domain K03832 tonB; periplasmic protein TonB D J172_00112 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J172_03313 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D J172_03315 Cell division and transport-associated protein TolA K03646 tolA; colicin import membrane protein D J172_03314 tol-pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D J172_03615 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D J172_00672 malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D J172_00673 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D J172_01583 Multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system D J172_02642 Multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system D J172_02296 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D J172_04329 Membrane-fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system D J172_02354 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J172_03018 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02664 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_03502 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02214 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_00437 RND family efflux transporter, MFP subunit K18321 smeA; membrane fusion protein, multidrug efflux system D J172_01622 RND family efflux transporter, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D J172_04017 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D J172_03706 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D J172_02001 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D J172_02002 Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B D J172_01966 TspO and MBR related protein K05770 TSPO; translocator protein D J172_04176 putative small secreted protein K16347 ecnA; entericidin A D J172_04177 putative small secreted protein K16347 ecnA; entericidin A D J172_02492 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D J172_01820 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D J172_00405 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J172_02974 Outer membrane protein V K07274 mipA; MipA family protein C 02044 Secretion system [BR:xcf02044] D J172_02355 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J172_02354 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_04381 ABC-type bacteriocin/lantibiotic exporters, containing an N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J172_00806 Type IV pilus biogenesis/PDZ domain K02452 gspC; general secretion pathway protein C D J172_00807 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D J172_03709 type II secretion system protein D K02453 gspD; general secretion pathway protein D D J172_00808 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_03719 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_04385 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J172_00809 type II secretion system protein F (GspF) K02455 gspF; general secretion pathway protein F D J172_03718 Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D J172_00810 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D J172_03717 type II secretion system protein G K02456 gspG; general secretion pathway protein G D J172_00811 type II secretion system protein H (GspH) K02457 gspH; general secretion pathway protein H D J172_03716 type II secretion system protein H K02457 gspH; general secretion pathway protein H D J172_00812 type II secretion system protein I (GspI) K02458 gspI; general secretion pathway protein I D J172_03715 prepilin-type N-terminal cleavage/methylation domain K02458 gspI; general secretion pathway protein I D J172_00813 type II secretion system protein J (GspJ) K02459 gspJ; general secretion pathway protein J D J172_03714 hypothetical protein K02459 gspJ; general secretion pathway protein J D J172_00814 type II secretion system protein K (GspK) K02460 gspK; general secretion pathway protein K D J172_03713 Type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D J172_00815 type II secretion system protein L (GspL) K02461 gspL; general secretion pathway protein L D J172_03712 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D J172_00816 type II secretion system protein M (GspM) K02462 gspM; general secretion pathway protein M D J172_03711 Type II secretion system (T2SS), protein M subtype b K02462 gspM; general secretion pathway protein M D J172_00817 type II secretion system protein N (GspN) K02463 gspN; general secretion pathway protein N D J172_03710 hypothetical protein K02463 gspN; general secretion pathway protein N D J172_03422 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J172_03420 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_03973 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J172_03419 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_03418 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J172_03421 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D J172_02838 prepilin-type N-terminal cleavage/methylation domain K02655 pilE; type IV pilus assembly protein PilE D J172_02167 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J172_03276 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J172_01279 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03275 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03274 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J172_03273 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J172_03559 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J172_03558 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D J172_03557 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D J172_03556 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J172_03555 type IV pilus secretin (or competence protein) PilQ K02666 pilQ; type IV pilus assembly protein PilQ D J172_03100 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D J172_03783 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J172_03099 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J172_02840 prepilin-type N-terminal cleavage/methylation domain K02672 pilW; type IV pilus assembly protein PilW D J172_02839 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D J172_01258 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D J172_02841 prepilin-type N-terminal cleavage/methylation domain K08084 fimT; type IV fimbrial biogenesis protein FimT D J172_02895 FimV N-terminal domain K08086 fimV; pilus assembly protein FimV D J172_03127 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA D J172_02235 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D J172_00529 Type II secretory pathway, component PulD K03219 yscC; type III secretion protein C D J172_00513 hypothetical protein K03220 yscD; type III secretion protein D D J172_00523 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D J172_00525 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D J172_00526 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D J172_02958 hypothetical protein K04057 yscP; type III secretion protein P D J172_00517 type III secretion system apparatus protein YscQ/HrcQ K03225 yscQ; type III secretion protein Q D J172_00516 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D J172_00515 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S D J172_00528 type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D J172_00520 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U D J172_00519 Type III secretory pathway, component EscV K03230 yscV; type III secretion protein V D J172_00521 type III secretion protein HrpB1/HrpK K18373 hrpB1; type III secretion protein HrpB1 D J172_00522 type III secretion protein HrpB2 K18374 hrpB2; type III secretion inner rod protein HrpB2 D J172_00511 hypothetical protein K18375 hrpE; type III secretion hrp pilus HrpE D J172_00507 NolX protein K18376 hrpF; type III secretion translocon protein HrpF D J172_00531 Soluble lytic murein transglycosylase K18377 hpa2; lysozyme-related protein Hpa2 D J172_00530 hypothetical protein K18378 hpa1; type III secretion harpin protein Hpa1 D J172_00514 hypothetical protein K18379 hpaA; type III secretion regulatory protein HpaA D J172_00510 Tir chaperone protein (CesT) family K18380 hpaB; type III secretion control protein HpaB D J172_00518 type III secretion protein HpaP K18381 hpaC; type III secretion control protein HpaP D J172_02084 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J172_02085 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J172_02102 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J172_02100 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J172_02099 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J172_02094 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J172_02093 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J172_02092 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J172_02090 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J172_02089 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J172_02790 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J172_00070 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J172_02789 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J172_00081 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J172_02788 Type IV secretory pathway, VirB3-like protein K03198 virB3; type IV secretion system protein VirB3 D J172_02787 type IV secretion/conjugal transfer ATPase, VirB4 family K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J172_00079 Type IV secretory pathway, VirB4 component K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J172_02786 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D J172_00078 Type IV secretion system protein K03200 virB5; type IV secretion system protein VirB5 D J172_02781 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_02785 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_00075 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J172_02794 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J172_00074 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J172_02793 Type IV secretory pathway, VirB9 component K03204 virB9; type IV secretion system protein VirB9 D J172_00073 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D J172_02792 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J172_00072 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J172_02791 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J172_00071 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J172_02796 Type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D J172_02357 ATPases involved in chromosome partitioning K12055 K12055; chromosome partitioning related protein ParA D J172_02349 integrating conjugative element relaxase, PFL_4751 family K12070 traI; conjugal transfer pilus assembly protein TraI D J172_02415 conjugative coupling factor TraD, TOL family K12071 traD; conjugal transfer pilus assembly protein TraD D J172_03725 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J172_03474 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D J172_04288 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D J172_04289 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D J172_04290 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ D J172_04309 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH D J172_04310 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG D J172_04311 type VI secretion system lysozyme-like protein K11897 impF; type VI secretion system protein ImpF D J172_04314 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC D J172_04315 hypothetical protein K11901 impB; type VI secretion system protein ImpB D J172_04281 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA D J172_04313 Hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D J172_04293 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D J172_04308 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D J172_04287 type VI secretion-associated protein, BMA_A0400 family K11890 impM; type VI secretion system protein ImpM D J172_04291 FHA domain protein K11894 impI; type VI secretion system protein ImpI D J172_04312 Protein of avirulence locus involved in temperature-dependent protein secretion K11898 impE; type VI secretion system protein ImpE D J172_01560 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01564 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01563 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J172_01562 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J172_01565 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J172_00904 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J172_00329 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J172_02678 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J172_01076 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J172_02677 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J172_02877 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J172_01110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J172_01422 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J172_02724 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J172_02679 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J172_04546 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J172_04391 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J172_04390 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J172_04389 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:xcf02042] D J172_01854 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J172_01684 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J172_00185 putative membrane protein, hemolysin III-like protein K11068 hlyIII; hemolysin III D J172_03221 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D J172_03333 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_01141 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J172_04097 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:xcf02022] D J172_01159 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J172_01160 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J172_04192 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J172_04193 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J172_03028 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J172_03029 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D J172_00436 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J172_00435 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 baeR; two-component system, OmpR family, response regulator BaeR D J172_00874 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J172_00875 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J172_03659 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J172_03660 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD D J172_00843 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J172_04144 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D J172_00844 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D J172_02261 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J172_04162 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J172_04161 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR D J172_02318 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 K02479; two-component system, NarL family, response regulator D J172_00733 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J172_00734 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR D J172_02292 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D J172_00315 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J172_00316 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J172_03413 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J172_03414 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J172_00334 sigma54 specific transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator D J172_02050 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02078 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03039 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02051 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02080 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_03451 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_01413 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_02035 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03044 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03900 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J172_02135 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J172_03272 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J172_03276 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J172_01279 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03275 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03271 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J172_01814 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13589 cpdR; two-component system, cell cycle response regulator CpdR D J172_02025 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J172_02024 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J172_01945 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D J172_01944 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D J172_00796 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:xcf02035] D J172_02050 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02078 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_03039 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J172_02053 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_03041 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02614 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J172_02036 Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D J172_01414 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_02037 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_03043 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J172_01413 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_02035 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03044 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J172_03900 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J172_02051 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02080 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_03451 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J172_02079 Chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D J172_02135 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J172_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_00725 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_03938 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02044 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02042 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03304 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03625 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_01891 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02046 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02047 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J172_02144 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02319 HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D J172_03388 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02615 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02049 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02043 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J172_02100 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J172_02099 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J172_02098 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D J172_02093 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J172_02092 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J172_02090 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J172_02089 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J172_02084 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J172_02085 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J172_02101 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J172_02095 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J172_02094 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J172_02102 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J172_02127 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D J172_02136 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D J172_02128 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D J172_02096 Flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D J172_02103 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D J172_02097 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D J172_02134 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D J172_02133 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D J172_02132 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D J172_02130 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D J172_02129 flagellar basal-body rod protein FlgG, Gram-negative bacteria K02392 flgG; flagellar basal-body rod protein FlgG D J172_02126 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D J172_02131 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D J172_02125 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D J172_02124 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D J172_02123 Flagellin K02406 fliC; flagellin D J172_02122 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D J172_02121 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D J172_02081 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J172_02056 Flagellar motor component K02556 motA; chemotaxis protein MotA D J172_03868 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J172_02055 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_03869 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J172_02115 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J172_02137 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D J172_02083 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D J172_02082 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG D J172_03276 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J172_01279 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03275 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J172_03274 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J172_03273 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J172_03272 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J172_03414 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J172_03413 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J172_03100 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D J172_03783 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J172_03099 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J172_03271 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J172_03270 Chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC D J172_03420 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_03973 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J172_03419 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J172_03418 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J172_03421 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D J172_03422 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J172_02167 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J172_03555 type IV pilus secretin (or competence protein) PilQ K02666 pilQ; type IV pilus assembly protein PilQ D J172_03556 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J172_03557 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D J172_03558 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D J172_03559 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J172_01258 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D J172_02840 prepilin-type N-terminal cleavage/methylation domain K02672 pilW; type IV pilus assembly protein PilW D J172_02839 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D J172_02838 prepilin-type N-terminal cleavage/methylation domain K02655 pilE; type IV pilus assembly protein PilE D J172_01560 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01564 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J172_01563 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J172_01562 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J172_01565 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:xcf04812] D J172_00768 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J172_00900 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J172_00899 cell division protein FtsA K03590 ftsA; cell division protein FtsA D J172_01358 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J172_01357 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J172_01356 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J172_00013 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J172_02054 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_00089 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_00052 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J172_00299 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J172_04074 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D J172_00088 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J172_04075 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:xcf04147] D J172_01400 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_02697 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J172_03518 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J172_01864 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J172_03526 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J172_03521 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J172_03519 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J172_04535 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_03160 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_00655 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J172_01663 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J172_01936 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J172_04212 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J172_00661 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_04419 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J172_02451 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J172_01074 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01088 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J172_01238 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J172_04045 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J172_02027 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J172_00321 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01484 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J172_01349 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D J172_00921 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J172_03612 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J172_02554 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J172_02509 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J172_02515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J172_03778 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J172_00229 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J172_01441 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J172_03249 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J172_00540 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J172_00264 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J172_00471 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D J172_00312 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02645 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_02647 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J172_04208 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J172_00567 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J172_02267 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J172_02932 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J172_01991 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_00126 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J172_00625 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J172_03834 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_01676 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J172_03762 electron transfer flavoprotein alpha subunit apoprotein K03522 fixB; electron transfer flavoprotein alpha subunit D J172_02221 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_04249 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J172_02878 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J172_03048 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J172_04124 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J172_00738 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J172_02733 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J172_04430 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:xcf02048] D J172_04011 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D J172_04012 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D J172_04005 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D J172_04010 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D J172_04008 CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1 D J172_04007 CRISPR-associated protein (Cas_Csd1) K19117 csd1; CRISPR-associated protein Csd1 D J172_04009 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D J172_04006 CRISPR-associated protein, Cas5d family K19119 cas5d; CRISPR-associated protein Cas5d D J172_03073 Type I site-specific restriction-modification system, R (restriction) subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D J172_03074 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J172_03075 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D J172_02816 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D J172_02367 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J172_02062 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J172_03037 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J172_03425 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J172_00066 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D J172_02340 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D J172_00021 Growth inhibitor K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D J172_00022 Growth regulator K18842 chpS; antitoxin ChpS D J172_00294 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J172_00295 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D J172_00885 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA D J172_01266 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D J172_00187 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D J172_01265 putative addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4 D J172_01322 death-on-curing family protein K07341 doc; death on curing protein D J172_00093 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D J172_00094 Virulence-associated protein K18829 mvpT; antitoxin VapB D J172_04488 putative nucleic acid-binding protein, contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-] D J172_04487 Plasmid stability protein K21495 fitA; antitoxin FitA D J172_00900 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J172_00768 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J172_01579 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J172_01859 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J172_03021 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J172_02231 hypothetical protein K19168 cptA; toxin CptA D J172_02230 hypothetical protein K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:xcf04052] D J172_00786 Nicotinic acid phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:xcf04090] D J172_04212 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J172_01349 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:xcf01504] D J172_04467 Arabinose efflux permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D J172_03536 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J172_00174 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J172_03537 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J172_03335 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J172_01365 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J172_04028 D-Ala-D-Ala dipeptidase vanX, Metallo peptidase, MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J172_01506 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D J172_04192 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J172_04193 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J172_03018 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02664 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_03502 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02214 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J172_02665 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03501 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J172_03017 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J172_03016 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J172_01625 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D J172_03637 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J172_03639 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J172_01619 Transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:xcf00536] D J172_04097 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] D J172_01962 filamentous hemagglutinin family N-terminal domain K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xcf00537] D J172_02932 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J172_00717 Neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D J172_04535 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_03160 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J172_04097 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:xcf03100] D J172_02581 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04133 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_02209 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_02211 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04064 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_04462 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J172_00505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01167 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01896 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_01956 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J172_02800 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J172_01207 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J172_01208 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J172_02246 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J172_00603 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J172_01066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J172_01930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_02208 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_02210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J172_01072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_02245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_02247 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_03473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J172_01168 tRNA-His K14226 tRNA-His; tRNA His D J172_04063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J172_04461 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J172_01585 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_02876 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J172_01197 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J172_03310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J172_02861 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_03954 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_00604 tRNA-Met K14230 tRNA-Met; tRNA Met D J172_02732 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J172_01166 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_02503 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_02758 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J172_01217 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01234 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J172_01073 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_01390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_04184 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J172_01075 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J172_01071 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J172_01206 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_01259 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_02798 tRNA-Val K14237 tRNA-Val; tRNA Val D J172_04065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04463 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J172_04061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J172_04459 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J172_04060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J172_04458 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J172_01226 SRP_RNA K01983 ffs; SRP RNA D J172_00883 RNase_P_RNA K01978 rnpB; M1 RNA D J172_01653 tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D J172_04088 Short-chain alcohol dehydrogenase of unknown specificity K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D J172_00347 Nucleoside-diphosphate-sugar epimerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D J172_03373 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D J172_04371 Glucose dehydrogenase K05889 pvadh; polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] D J172_04037 Glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D J172_01006 putative dehydrogenase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28] D J172_00296 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D J172_01127 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D J172_00397 Putative NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D J172_03288 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D J172_03750 Dehydrogenases (flavoproteins) K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D J172_01467 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D J172_01128 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J172_00910 putative NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J172_03942 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D J172_01798 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D J172_01023 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D J172_01018 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D J172_03866 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D J172_04213 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D J172_00697 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D J172_01791 Sulfite oxidase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D J172_03897 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D J172_02185 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D J172_01902 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J172_01024 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D J172_03091 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D J172_00392 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D J172_01892 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J172_03054 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J172_03118 putative iron-regulated protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D J172_00973 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D J172_01596 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D J172_03687 arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D J172_03290 coenzyme PQQ biosynthesis enzyme PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D J172_03638 Protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D J172_01871 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D J172_01510 Cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D J172_01513 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D J172_04318 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D J172_01735 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D J172_03959 Sortase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D J172_02484 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D J172_02151 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D J172_01240 Transglutaminase-like enzyme, putative cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D J172_01371 Putative arginyl-tRNA:protein arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D J172_00341 3-oxoacyl-[acyl-carrier-protein] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D J172_04368 Cellobiose phosphorylase K18786 E2.4.1.321; cellobionic acid phosphorylase [EC:2.4.1.321] D J172_00677 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D J172_00959 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D J172_03123 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D J172_02192 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D J172_00663 Glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D J172_00676 malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D J172_02555 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D J172_00535 Phosphoglycerol transferase K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D J172_04000 Isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D J172_03151 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D J172_03649 His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/PAS fold K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3] D J172_01917 protein of unknown function (DUF303) K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J172_04401 protein of unknown function (DUF303) K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J172_03517 putative phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D J172_01343 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J172_00267 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J172_03489 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J172_01379 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J172_03318 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J172_00300 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D J172_04126 putative signal transduction protein containing sensor and EAL domains K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D J172_02660 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D J172_00462 putative domain HDIG K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D J172_00423 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J172_03691 Endoglucanase Y K20542 bcsZ; endoglucanase [EC:3.2.1.4] D J172_04420 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J172_04423 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J172_04425 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J172_01185 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D J172_01444 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D J172_00688 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D J172_04400 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D J172_01919 Alpha-glucosidase, family 31 of glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D J172_01732 Negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_04029 Negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J172_03686 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J172_03969 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J172_03163 tricorn interacting aminopeptidase F1, Serine peptidase, MEROPS family S33 K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D J172_03676 putative xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D J172_01246 MAF protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D J172_01242 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J172_00223 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J172_03553 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J172_00674 malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D J172_00675 malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D J172_00343 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D J172_01302 yjeF C-terminal region, hydroxyethylthiazole kinase-related K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D J172_02571 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D J172_03682 Rhamnogalacturonase B, N-terminal K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23] D J172_04362 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D J172_01728 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D J172_00345 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D J172_03611 UDP-N-acetylmuramate--L-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D J172_01521 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D J172_02654 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D J172_01907 Ferredoxin K05524 fdxA; ferredoxin D J172_03761 electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D J172_01527 Lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D J172_03101 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein D J172_02511 Acetyltransferase, including N-acetylase of ribosomal protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D J172_02459 Protein of unknown function (DUF1049) K08992 lapA; lipopolysaccharide assembly protein A D J172_02458 putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B D J172_03196 Killing trait K21687 rpfA; resuscitation-promoting factor RpfA D J172_03763 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D J172_00325 Glycosyltransferase involved in LPS biosynthesis K07270 K07270; glycosyl transferase, family 25 D J172_03692 Bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D J172_00322 heme biosynthesis-associated TPR protein K02498 hemY; HemY protein D J172_00351 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D J172_01884 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D J172_00350 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D J172_04099 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism D J172_01614 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D J172_02314 putative membrane protein K15977 K15977; putative oxidoreductase D J172_03881 putative membrane protein K15977 K15977; putative oxidoreductase D J172_00732 putative esterase K06999 K06999; phospholipase/carboxylesterase D J172_04245 Acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D J172_01472 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J172_01603 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J172_02558 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J172_02203 Transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D J172_01478 putative exonuclease, DNA ligase-associated K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D J172_02148 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D J172_01201 trigger factor K03545 tig; trigger factor D J172_01790 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D J172_01655 SsrA-binding protein K03664 smpB; SsrA-binding protein D J172_04100 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D J172_03053 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein D J172_02268 Thioredoxin-like protein and domains K07400 nfuA; Fe/S biogenesis protein NfuA D J172_03066 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D J172_02922 putative methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D J172_04084 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D J172_02328 DNA repair protein radc K03630 radC; DNA repair protein RadC D J172_02442 DNA repair protein radc K03630 radC; DNA repair protein RadC D J172_03445 DNA repair protein radc K03630 radC; DNA repair protein RadC D J172_04522 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D J172_04111 putative ATP-dependent endonuclease of the OLD family K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D J172_00880 TIGR00252 family protein K07460 yraN; putative endonuclease D J172_03376 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease D J172_03971 DNA protecting protein DprA K04096 smf; DNA processing protein D J172_02158 Recombination protein MgsA K07478 ycaJ; putative ATPase D J172_01807 Toprim domain/Origin of replication binding protein K06919 K06919; putative DNA primase/helicase D J172_02586 Transposase domain (DUF772)/Transposase DDE domain K07481 K07481; transposase, IS5 family D J172_02807 transposase K07483 K07483; transposase D J172_02837 transposase K07483 K07483; transposase D J172_01228 transposase K07483 K07483; transposase D J172_02284 transposase K07483 K07483; transposase D J172_01171 transposase K07483 K07483; transposase D J172_01194 transposase K07483 K07483; transposase D J172_02069 transposase K07483 K07483; transposase D J172_02380 transposase K07483 K07483; transposase D J172_04104 hypothetical protein K07483 K07483; transposase D J172_04495 transposase K07483 K07483; transposase D J172_02253 transposase K07483 K07483; transposase D J172_00260 transposase K07483 K07483; transposase D J172_02325 transposase K07483 K07483; transposase D J172_00455 transposase K07483 K07483; transposase D J172_00691 transposase K07483 K07483; transposase D J172_00196 transposase K07483 K07483; transposase D J172_03397 transposase K07483 K07483; transposase D J172_03426 transposase K07483 K07483; transposase D J172_01804 transposase K07483 K07483; transposase D J172_03495 transposase K07483 K07483; transposase D J172_04379 transposase K07483 K07483; transposase D J172_01283 transposase K07491 rayT; REP-associated tyrosine transposase D J172_02587 transposase K07497 K07497; putative transposase D J172_02588 Transposase K07497 K07497; putative transposase D J172_03457 Transposase K07497 K07497; putative transposase D J172_03458 transposase K07497 K07497; putative transposase D J172_01805 transposase K07497 K07497; putative transposase D J172_03494 transposase K07497 K07497; putative transposase D J172_04380 transposase K07497 K07497; putative transposase D J172_02778 Transposase K07497 K07497; putative transposase D J172_02779 transposase K07497 K07497; putative transposase D J172_04496 transposase K07497 K07497; putative transposase D J172_00197 transposase K07497 K07497; putative transposase D J172_02808 transposase K07497 K07497; putative transposase D J172_02836 transposase K07497 K07497; putative transposase D J172_03680 Transposase K07497 K07497; putative transposase D J172_03681 transposase K07497 K07497; putative transposase D J172_00261 transposase K07497 K07497; putative transposase D J172_00046 transposase K07497 K07497; putative transposase D J172_00047 Transposase K07497 K07497; putative transposase D J172_01170 transposase K07497 K07497; putative transposase D J172_01195 transposase K07497 K07497; putative transposase D J172_02068 transposase K07497 K07497; putative transposase D J172_00084 transposase K07497 K07497; putative transposase D J172_00085 Transposase K07497 K07497; putative transposase D J172_00097 transposase K07497 K07497; putative transposase D J172_01229 transposase K07497 K07497; putative transposase D J172_00454 transposase K07497 K07497; putative transposase D J172_02250 transposase K07497 K07497; putative transposase D J172_02251 Transposase K07497 K07497; putative transposase D J172_02252 transposase K07497 K07497; putative transposase D J172_03064 transposase K07497 K07497; putative transposase D J172_03065 Transposase K07497 K07497; putative transposase D J172_03934 Transposase K07497 K07497; putative transposase D J172_03935 transposase K07497 K07497; putative transposase D J172_02283 transposase K07497 K07497; putative transposase D J172_02324 transposase K07497 K07497; putative transposase D J172_02381 transposase K07497 K07497; putative transposase D J172_04112 transposase K07497 K07497; putative transposase D J172_04113 Transposase K07497 K07497; putative transposase D J172_00690 transposase K07497 K07497; putative transposase D J172_01645 Transposase K07497 K07497; putative transposase D J172_01646 transposase K07497 K07497; putative transposase D J172_02534 Transposase K07497 K07497; putative transposase D J172_03398 transposase K07497 K07497; putative transposase D J172_03427 transposase K07497 K07497; putative transposase D J172_02596 transposase K07497 K07497; putative transposase D J172_02072 Integrase core domain K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D J172_01236 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D J172_04369 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D J172_03161 amino acid/polyamine/organocation transporter, APC superfamily K03293 TC.AAT; amino acid transporter, AAT family D J172_01988 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J172_01989 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J172_04528 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J172_02215 Cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J172_03662 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D J172_03234 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D J172_00564 amino acid/peptide transporter (Peptide:H+ symporter), bacterial K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D J172_01588 amino acid/peptide transporter (Peptide:H+ symporter), bacterial K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D J172_01856 Phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D J172_01941 transporter, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family D J172_00937 Nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family D J172_01837 Membrane protein involved in the export of O-antigen and teichoic acid K03328 TC.PST; polysaccharide transporter, PST family D J172_02749 Membrane protein involved in the export of O-antigen and teichoic acid K03328 TC.PST; polysaccharide transporter, PST family C 99978 Cell growth D J172_00128 Membrane-bound metallopeptidase K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D J172_00616 Membrane protein required for beta-lactamase induction K03807 ampE; AmpE protein D J172_01122 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D J172_02629 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D J172_01901 putative ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase D J172_01815 RecA-superfamily ATPases implicated in signal transduction K08482 kaiC; circadian clock protein KaiC D J172_03846 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein D J172_01287 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein C 99992 Structural proteins D J172_02156 periplasmic chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D J172_01064 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D J172_04518 Surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D J172_01604 Outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D J172_00790 putative outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D J172_01873 Membrane protein related to metalloendopeptidase K06194 nlpD; lipoprotein NlpD D J172_03839 Outer membrane protein W K07275 ompW; outer membrane protein D J172_03528 Outer membrane protein W K07275 ompW; outer membrane protein D J172_00736 Putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein D J172_01239 outer membrane lipoprotein, Slp family K07285 slp; outer membrane lipoprotein D J172_03222 Uncharacterized protein involved in outer membrane biogenesis K07290 yhjG; AsmA family protein D J172_03239 Membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein D J172_03814 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D J172_03026 Inner membrane protein involved in colicin E2 resistance K06143 creD; inner membrane protein D J172_02491 Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D J172_01821 Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D J172_02494 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J172_02495 Cytochrome c biogenesis factor K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J172_01818 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J172_02756 Uncharacterized protein involved in exopolysaccharide biosynthesis K13661 gumC; GumC protein D J172_02754 hypothetical protein K13662 gumE; putative polymerase D J172_02168 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D J172_01715 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D J172_04455 Periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D J172_04539 Membrane protein TerC, possibly involved in tellurium resistance K05794 terC; tellurite resistance protein TerC D J172_00647 hypothetical protein K03926 cutA; periplasmic divalent cation tolerance protein D J172_03267 Uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein D J172_00980 Uncharacterized protein affecting Mg2+/Co2+ transport K06195 apaG; ApaG protein D J172_02650 hemerythrin-like metal-binding domain K07216 hr; hemerythrin D J172_03806 Uncharacterized protein involved in copper resistance K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D J172_01147 putative membrane protein, required for colicin V production K03558 cvpA; membrane protein required for colicin V production D J172_02826 putative chitinase K03791 K03791; putative chitinase D J172_00580 putative chitinase K03791 K03791; putative chitinase D J172_00752 putative acyltransferase K02348 elaA; ElaA protein D J172_00794 putative periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein D J172_03287 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D J172_03289 coenzyme PQQ biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D J172_00184 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster K06877 K06877; DEAD/DEAH box helicase domain-containing protein D J172_02880 Truncated hemoglobin K06886 glbN; hemoglobin D J172_00284 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D J172_04023 putative hydrolase (HAD superfamily) K07025 K07025; putative hydrolase of the HAD superfamily D J172_00612 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D J172_03111 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D J172_03113 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D J172_00931 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D J172_00879 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D J172_01054 tRNA-processing RNAse BN K07058 K07058; membrane protein D J172_04043 putative membrane protein K07058 K07058; membrane protein D J172_02519 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE D J172_02260 putative sulfurtransferase K07146 K07146; UPF0176 protein D J172_02145 Uncharacterized protein involved in purine metabolism K07153 hflD; high frequency lysogenization protein D J172_00956 hypothetical protein K03744 lemA; LemA protein D J172_01696 hypothetical protein K03745 slyX; SlyX protein D J172_03972 hypothetical protein K03747 smg; Smg protein D J172_03962 putative membrane protein K08981 K08981; putative membrane protein D J172_03233 putative membrane protein K08987 K08987; putative membrane protein D J172_03181 putative membrane protein K08989 K08989; putative membrane protein D J172_02176 putative outer membrane protein K08995 K08995; putative membrane protein D J172_04470 hypothetical protein K09858 K09858; SEC-C motif domain protein D J172_01497 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D J172_04197 Ankyrin repeat protein K06867 K06867; uncharacterized protein D J172_04252 Ankyrin repeat protein K06867 K06867; uncharacterized protein D J172_02075 radical SAM additional 4Fe4S-binding SPASM domain K06871 K06871; uncharacterized protein D J172_00957 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein D J172_02306 Stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D J172_02729 Stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D J172_04137 Alpha/beta hydrolase family K06889 K06889; uncharacterized protein D J172_03654 Ketosteroid isomerase-related protein K06893 K06893; uncharacterized protein D J172_00344 putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein D J172_00459 hypothetical protein K06940 K06940; uncharacterized protein D J172_04182 putative GTPase K06945 K06945; uncharacterized protein D J172_01474 putative phosphoesterase K06953 K06953; uncharacterized protein D J172_01515 putative NAD/FAD-binding protein K06954 K06954; uncharacterized protein D J172_01591 putative acetyltransferase K06975 K06975; uncharacterized protein D J172_01359 putative acetyltransferase, GNAT superfamily K06977 K06977; uncharacterized protein D J172_02505 putative hydrolase, CocE/NonD family K06978 K06978; uncharacterized protein D J172_00708 putative archaeal methyltransferase K06983 K06983; uncharacterized protein D J172_00361 putative enzyme related to lactoylglutathione lyase K06996 K06996; uncharacterized protein D J172_02894 putative enzyme related to lactoylglutathione lyase K06996 K06996; uncharacterized protein D J172_00384 putative extracellular nuclease K07004 K07004; uncharacterized protein D J172_00562 putative extracellular nuclease K07004 K07004; uncharacterized protein D J172_03795 putative hydrolase of the alpha/beta superfamily K07017 K07017; uncharacterized protein D J172_00389 putative hydrolase of the alpha/beta superfamily K07018 K07018; uncharacterized protein D J172_00305 putative hydrolase of the alpha/beta-hydrolase fold K07019 K07019; uncharacterized protein D J172_00101 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein D J172_00030 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein D J172_04143 TIGR01777 family protein K07071 K07071; uncharacterized protein D J172_04471 putative permease K07090 K07090; uncharacterized protein D J172_00782 putative permease K07090 K07090; uncharacterized protein D J172_02949 putative phosphatase K07093 K07093; uncharacterized protein D J172_01939 putative phosphatase K07093 K07093; uncharacterized protein D J172_00265 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D J172_03109 Proteins containing SET domain K07117 K07117; uncharacterized protein D J172_00881 Putative lipoprotein K07121 K07121; uncharacterized protein D J172_02879 Short-chain dehydrogenase of various substrate specificities K07124 K07124; uncharacterized protein D J172_03119 Sel1 repeat K07126 K07126; uncharacterized protein D J172_02925 putative membrane protein K07148 K07148; uncharacterized protein D J172_03610 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein D J172_02522 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D J172_01318 hypothetical protein K09003 K09003; uncharacterized protein D J172_03589 hypothetical protein K09005 K09005; uncharacterized protein D J172_04042 hypothetical protein K09117 K09117; uncharacterized protein D J172_00778 hypothetical protein K09158 K09158; uncharacterized protein D J172_02567 hypothetical protein K09164 K09164; uncharacterized protein D J172_01731 hypothetical protein K09164 K09164; uncharacterized protein D J172_03961 hypothetical protein K09167 K09167; uncharacterized protein D J172_01514 hypothetical protein K09701 K09701; uncharacterized protein D J172_02303 hypothetical protein K09702 K09702; uncharacterized protein D J172_03259 hypothetical protein K09704 K09704; uncharacterized protein D J172_02745 hypothetical protein K09705 K09705; uncharacterized protein D J172_02961 hypothetical protein K09779 K09779; uncharacterized protein D J172_02479 hypothetical protein K09780 K09780; uncharacterized protein D J172_00537 hypothetical protein K09781 K09781; uncharacterized protein D J172_00744 hypothetical protein K09790 K09790; uncharacterized protein D J172_01602 hypothetical protein K09793 K09793; uncharacterized protein D J172_04244 hypothetical protein K09799 K09799; uncharacterized protein D J172_01657 hypothetical protein K09801 K09801; uncharacterized protein D J172_02945 hypothetical protein K09807 K09807; uncharacterized protein D J172_02323 hypothetical protein K09822 K09822; uncharacterized protein D J172_03582 hypothetical protein K09895 K09895; uncharacterized protein D J172_04253 hypothetical protein K09902 K09902; uncharacterized protein D J172_00915 hypothetical protein K09912 K09912; uncharacterized protein D J172_04449 hypothetical protein K09915 K09915; uncharacterized protein D J172_02152 hypothetical protein K09919 K09919; uncharacterized protein D J172_02193 hypothetical protein K09920 K09920; uncharacterized protein D J172_00747 hypothetical protein K09921 K09921; uncharacterized protein D J172_00944 hypothetical protein K09922 K09922; uncharacterized protein D J172_00354 hypothetical protein K09924 K09924; uncharacterized protein D J172_03134 hypothetical protein K09938 K09938; uncharacterized protein D J172_03120 hypothetical protein K09939 K09939; uncharacterized protein D J172_02937 hypothetical protein K09940 K09940; uncharacterized protein D J172_03850 hypothetical protein K09941 K09941; uncharacterized protein D J172_02453 hypothetical protein K09948 K09948; uncharacterized protein D J172_02700 hypothetical protein K09955 K09955; uncharacterized protein D J172_04497 hypothetical protein K09958 K09958; uncharacterized protein D J172_00235 hypothetical protein K09959 K09959; uncharacterized protein D J172_02566 hypothetical protein K09973 K09973; uncharacterized protein D J172_03126 hypothetical protein K09975 K09975; uncharacterized protein D J172_03185 hypothetical protein K09980 K09980; uncharacterized protein D J172_04160 Trehalose utilization K09992 K09992; uncharacterized protein D J172_00183 putative exonuclease K07502 yprB; uncharacterized protein D J172_01855 Phosphate transport regulator K07220 K07220; uncharacterized protein D J172_00666 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 24, 2024