+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Xanthomonas citri pv. citri UI7
%
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ACRISPR-Cas system
B Universal Cas proteins
C J159_03993 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C J159_03994 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D J159_03987 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D J159_03990 CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1
D J159_03989 CRISPR-associated protein (Cas_Csd1) K19117 csd1; CRISPR-associated protein Csd1
D J159_03991 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D J159_03988 CRISPR-associated protein, Cas5d family K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D J159_02808 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
D J159_03410 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE
D J159_02059 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE
D J159_03029 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D J159_00074 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D J159_02338 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
C ChpB-ChpS
D J159_00027 Growth inhibitor K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D J159_00028 Growth regulator K18842 chpS; antitoxin ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
D J159_00301 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D J159_00302 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
D J159_00891 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
C ParE-ParD
D J159_01272 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D J159_00194 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D J159_01271 putative addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D J159_01328 death-on-curing family protein K07341 doc; death on curing protein
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
D J159_00101 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D J159_00102 Virulence-associated protein K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D J159_04447 putative nucleic acid-binding protein, contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-]
D J159_04446 Plasmid stability protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D J159_00906 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D J159_00774 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D J159_01584 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D J159_01856 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D J159_02228 hypothetical protein K19168 cptA; toxin CptA
D J159_02227 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023