+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D YE1017 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases D YE1747 conserved hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D YE0369 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C YE1018 era; putative GTP-binding protein K03595 era; GTPase C YE0421 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C YE0725 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor C YE0433 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA C YE3159 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C YE0280 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D YE1424 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D YE0630 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D YE3891 conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D YE0561 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D YE0224 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D YE3426 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D YE4214 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D YE0664 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D YE3726 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D YE4053 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D YE1768 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D YE0385 putative methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D YE0427 ftsJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D YE2849 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D YE3699 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D YE3001 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D YE1593 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D YE4055 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D YE1571 conserved hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D YE3298 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D YE1070 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D YE0743 rumA; 23s rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D YE1490 putative RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D YE0635 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D YE2636 rluA; putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D YE2206 putative RNA pseudouridylate synthase-family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D YE1628 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D YE0891 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D YE1724 ymfC; putative pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D YE1843 conserved hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D YE3244 putative trna/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] B ribosomal protein modification factors C YE0563 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C YE2412 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C YE0844 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM C YE1150 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C YE1534 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C YE3815 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] C YE1280 conserved hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] C YE1716 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] C YE3022 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] B rRNA processing factors C YE1017 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C YE1627 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C YE3801 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C YE3429 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C YE1785 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] C YE0440 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C YE1007 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] B GTPases C YE1018 era; putative GTP-binding protein K03595 era; GTPase C YE0368 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C YE1077 engA; putative GTP-binding protein K03977 engA; GTPase C YE0421 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] C YE0378 hflX; GTP-binding protein K03665 hflX; GTPase B Other maturation factors C YE3885 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C YE0045 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C YE0435 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C YE0432 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C YE3046 conserved hypothetical protein K14761 rlbA; ribosome-associated protein C YE3000 conserved hypothetical protein K09710 ybeB; ribosome-associated protein C YE2987 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor C YE0426 conserved hypothetical protein K07574 yhbY; RNA-binding protein C YE4143 conserved hypothetical protein K14762 yibL; ribosome-associated protein C YE3790 conserved hypothetical protein K09889 yjgA; ribosome-associated protein C YE3760 yhbH; probable sigma (54) modulation protein K05808 hpf; ribosome hibernation promoting factor C YE0889 yfiA; putative sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A C YE2439 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase C YE1630 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025