+D GENES KO #

  KEGG Orthology (KO) - Yimella sp. cx-51

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:yim00010] D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_07025 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5M86_04370 phosphosugar isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D J5M86_13705 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J5M86_11435 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D J5M86_12795 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5M86_06995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J5M86_06985 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5M86_06990 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J5M86_12450 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5M86_06770 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5M86_11860 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J5M86_06030 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J5M86_09060 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_02735 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5M86_02730 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5M86_11280 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D J5M86_06135 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_03605 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_02590 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_06115 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D J5M86_00780 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:yim00020] D J5M86_11195 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J5M86_08600 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J5M86_03690 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J5M86_10650 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_02735 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5M86_02730 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5M86_03640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J5M86_03635 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5M86_03820 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5M86_03825 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_14000 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_03815 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_14010 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_11490 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J5M86_01260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_00780 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D J5M86_06030 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J5M86_09060 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:yim00030] D J5M86_07025 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5M86_04370 phosphosugar isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D J5M86_13685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_02515 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_07020 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_07010 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D J5M86_00015 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J5M86_06645 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J5M86_07035 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J5M86_07030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J5M86_09920 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J5M86_03960 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_03190 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J5M86_08280 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D J5M86_12795 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5M86_11435 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D J5M86_13705 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:yim00040] D J5M86_04165 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5M86_03015 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J5M86_06645 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J5M86_01485 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D J5M86_01480 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:yim00051] D J5M86_11440 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5M86_12470 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5M86_04370 phosphosugar isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D J5M86_03970 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_04360 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_03840 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5M86_13705 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J5M86_11435 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D J5M86_13010 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J5M86_00680 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J5M86_01480 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J5M86_12795 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5M86_06995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J5M86_09920 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J5M86_13015 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J5M86_06350 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:yim00052] D J5M86_02590 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5M86_00835 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_02355 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_03015 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_13705 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J5M86_09950 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:yim00053] D J5M86_04165 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:yim00500] D J5M86_09950 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J5M86_11900 alpha-amylase family protein K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D J5M86_03015 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J5M86_12130 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D J5M86_07170 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D J5M86_03775 glycosyltransferase family 4 protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D J5M86_01640 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5M86_10320 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5M86_10305 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D J5M86_10315 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D J5M86_09935 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D J5M86_10310 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D J5M86_07175 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D J5M86_08470 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J5M86_10290 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J5M86_12620 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D J5M86_12625 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_07025 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5M86_04370 phosphosugar isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D J5M86_11440 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:yim00520] D J5M86_03485 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J5M86_14680 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D J5M86_11440 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5M86_03435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5M86_11510 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D J5M86_03185 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J5M86_08555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5M86_12035 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5M86_04220 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D J5M86_03765 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_06115 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_03015 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J5M86_04165 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5M86_00835 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_02355 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_06350 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J5M86_07025 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5M86_04370 phosphosugar isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D J5M86_12470 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5M86_03970 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_04360 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_03840 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5M86_07170 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:yim00620] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_02735 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5M86_02730 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5M86_06030 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J5M86_09060 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_06135 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J5M86_01015 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5M86_01020 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5M86_06770 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5M86_04005 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D J5M86_09480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_03605 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J5M86_11280 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D J5M86_12935 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D J5M86_01515 alpha-hydroxy-acid oxidizing protein K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D J5M86_08095 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J5M86_11355 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D J5M86_04665 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J5M86_09030 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_11490 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J5M86_01260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J5M86_13805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J5M86_00780 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D J5M86_11860 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J5M86_12135 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D J5M86_05000 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_05805 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D J5M86_10155 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:yim00630] D J5M86_05005 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_12135 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D J5M86_05000 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_11195 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J5M86_08600 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10395 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D J5M86_04005 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D J5M86_04125 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D J5M86_03245 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03250 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_05675 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D J5M86_07870 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D J5M86_05670 FAD-binding oxidoreductase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D J5M86_05665 4Fe-4S dicluster domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D J5M86_14120 catalase K03781 katE; catalase [EC:1.11.1.6] D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_00615 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_10510 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_07935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J5M86_09040 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_07960 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D J5M86_13130 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_08985 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_10650 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D J5M86_00405 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D J5M86_00410 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D J5M86_00415 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D J5M86_00640 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J5M86_09425 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:yim00640] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_05235 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D J5M86_01015 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5M86_01020 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5M86_13205 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_00875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_13210 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_00880 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_13285 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D J5M86_13215 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_00885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_12090 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_04005 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_04125 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D J5M86_10395 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D J5M86_03245 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03250 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03635 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5M86_03640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J5M86_13775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J5M86_11280 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:yim00650] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_13055 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_10405 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_03820 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5M86_03825 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_14000 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_03815 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_14010 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_03540 succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_05320 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_02735 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5M86_02730 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5M86_02565 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J5M86_01625 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J5M86_01630 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J5M86_10890 beta-lactamase family protein K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114] D J5M86_10180 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J5M86_10175 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:yim00660] D J5M86_10180 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J5M86_10175 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J5M86_03635 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5M86_03640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J5M86_04805 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J5M86_04810 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J5M86_10165 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:yim00562] D J5M86_08640 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J5M86_14305 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D J5M86_08195 CDP-alcohol phosphatidyltransferase family protein K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D J5M86_15055 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D J5M86_15050 TIM barrel protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D J5M86_13750 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D J5M86_13770 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D J5M86_13760 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D J5M86_13775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J5M86_06995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:yim00190] D J5M86_02630 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J5M86_02750 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J5M86_02635 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J5M86_02755 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J5M86_02640 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D J5M86_02760 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D J5M86_02110 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D J5M86_02645 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D J5M86_02650 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D J5M86_02655 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D J5M86_02660 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D J5M86_02665 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J5M86_02765 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J5M86_02770 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D J5M86_02675 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J5M86_02775 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J5M86_02680 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J5M86_02780 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J5M86_02685 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J5M86_02785 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J5M86_02690 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J5M86_02790 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J5M86_02695 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J5M86_02795 NADH/ubiquinone/plastoquinone K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J5M86_11715 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D J5M86_03820 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5M86_03825 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_14000 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_03815 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_14010 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_08930 Rieske (2Fe-2S) protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D J5M86_08935 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D J5M86_08925 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D J5M86_07040 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J5M86_08950 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D J5M86_08920 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D J5M86_08955 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D J5M86_08960 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D J5M86_07045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D J5M86_14595 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J5M86_14590 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J5M86_10470 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J5M86_10460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J5M86_10465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J5M86_10475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J5M86_10435 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J5M86_10490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J5M86_10480 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J5M86_10485 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J5M86_03060 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D J5M86_02005 HAD-IIIA family hydrolase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1] D J5M86_12540 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J5M86_00300 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J5M86_11330 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:yim00710] D J5M86_06990 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J5M86_06985 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5M86_12795 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5M86_11435 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D J5M86_07035 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J5M86_09920 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J5M86_06995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J5M86_06645 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J5M86_07030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J5M86_13805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:yim00720] D J5M86_11860 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J5M86_13805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_11490 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J5M86_01260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J5M86_03820 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5M86_03825 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_14000 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5M86_03815 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_14010 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5M86_03640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J5M86_03635 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_02735 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5M86_02730 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5M86_03690 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J5M86_08600 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J5M86_10395 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D J5M86_03245 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03250 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_11295 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D J5M86_03670 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J5M86_08820 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J5M86_01020 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5M86_01015 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:yim00680] D J5M86_13430 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D J5M86_04730 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D J5M86_00405 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D J5M86_00410 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D J5M86_00415 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D J5M86_00615 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_10510 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5M86_13805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_12795 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5M86_11435 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D J5M86_13705 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J5M86_01015 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5M86_01020 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_11860 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J5M86_12450 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5M86_09325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5M86_02885 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5M86_07165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D J5M86_08940 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D J5M86_04825 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D J5M86_04320 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D J5M86_04315 coenzyme F420-0:L-glutamate ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:yim00910] D J5M86_04450 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D J5M86_04455 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D J5M86_04460 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04465 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04475 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D J5M86_05915 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D J5M86_04630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J5M86_13290 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D J5M86_00495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_06760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J5M86_06765 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J5M86_11495 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:yim00920] D J5M86_00735 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D J5M86_11945 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J5M86_11950 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J5M86_11955 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D J5M86_05440 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D J5M86_05435 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D J5M86_14065 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_05875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_01095 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J5M86_01090 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D J5M86_10520 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D J5M86_09265 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J5M86_03370 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_04840 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_06065 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:yim00061] D J5M86_04005 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D J5M86_04260 acyl carrier protein K02078 acpP; acyl carrier protein D J5M86_05995 acyl carrier protein K02078 acpP; acyl carrier protein D J5M86_06005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5M86_06000 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J5M86_05990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5M86_12075 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_12150 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_04270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_07140 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_13925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_14750 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_05500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_11085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:yim00071] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_12090 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D J5M86_05650 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J5M86_07865 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J5M86_13270 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J5M86_13925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_14750 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_05500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_11085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:yim00561] D J5M86_13130 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_08985 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_06135 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J5M86_08700 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D J5M86_08705 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D J5M86_08710 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D J5M86_01215 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D J5M86_06345 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D J5M86_01560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_07820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08045 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_14490 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J5M86_13785 DUF1298 domain-containing protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D J5M86_02940 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D J5M86_04605 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] C 00564 Glycerophospholipid metabolism [PATH:yim00564] D J5M86_04835 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D J5M86_12240 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D J5M86_01205 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D J5M86_01560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_07820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08045 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_14490 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J5M86_14555 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J5M86_06015 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J5M86_08560 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J5M86_05190 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J5M86_14620 hypothetical protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D J5M86_09575 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J5M86_07980 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D J5M86_12250 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] C 00600 Sphingolipid metabolism [PATH:yim00600] D J5M86_14645 aspartate aminotransferase family protein K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:yim00592] D J5M86_12090 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:yim01040] D J5M86_13415 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J5M86_05960 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J5M86_13410 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D J5M86_05955 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D J5M86_12090 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D J5M86_10660 G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J5M86_09965 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:yim00230] D J5M86_14180 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_03190 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J5M86_12685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J5M86_12720 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D J5M86_03660 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J5M86_13040 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D J5M86_12680 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D J5M86_04155 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D J5M86_04160 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D J5M86_12710 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D J5M86_14445 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J5M86_03665 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5M86_08125 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J5M86_12175 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5M86_00675 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5M86_03800 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D J5M86_03975 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D J5M86_09180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J5M86_02060 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D J5M86_03520 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5M86_03535 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5M86_09845 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J5M86_10105 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D J5M86_13120 FAD binding domain-containing protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D J5M86_13115 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D J5M86_07785 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D J5M86_07780 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D J5M86_07775 2Fe-2S iron-sulfur cluster binding domain-containing protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D J5M86_03565 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J5M86_06095 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7] D J5M86_13105 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D J5M86_06605 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D J5M86_00990 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_09360 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_00985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J5M86_05895 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D J5M86_08120 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5M86_02285 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D J5M86_03240 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D J5M86_04130 biotin--[acetyl-CoA-carboxylase] ligase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D J5M86_12750 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J5M86_08970 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D J5M86_12030 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D J5M86_03905 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D J5M86_11710 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J5M86_03495 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D J5M86_08200 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D J5M86_11945 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J5M86_11950 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J5M86_11955 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D J5M86_13145 pucL; urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3] D J5M86_13135 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J5M86_13140 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D J5M86_12275 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5] D J5M86_13125 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] C 00240 Pyrimidine metabolism [PATH:yim00240] D J5M86_06580 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5M86_06575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5M86_06565 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J5M86_06570 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J5M86_06590 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D J5M86_06585 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D J5M86_03845 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D J5M86_12870 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D J5M86_06595 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D J5M86_05180 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D J5M86_09845 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J5M86_04065 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D J5M86_06405 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D J5M86_08050 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D J5M86_03945 ATP-binding protein K00876 udk; uridine kinase [EC:2.7.1.48] D J5M86_12175 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5M86_00675 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5M86_03800 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D J5M86_01435 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D J5M86_06560 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D J5M86_03885 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D J5M86_01030 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D J5M86_00990 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_09360 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_00985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J5M86_01990 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D J5M86_08630 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J5M86_03895 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D J5M86_08660 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D J5M86_09625 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J5M86_13235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:yim00250] D J5M86_05720 FAD-binding protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D J5M86_13150 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D J5M86_10440 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J5M86_07925 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J5M86_08585 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D J5M86_06430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J5M86_06300 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J5M86_12750 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J5M86_14445 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J5M86_06565 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_03540 succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_05320 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_06760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J5M86_06765 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J5M86_04630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J5M86_13290 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D J5M86_00495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5M86_04615 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_06580 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5M86_06575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5M86_01780 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D J5M86_03435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5M86_12685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:yim00260] D J5M86_01580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5M86_01585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_01590 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_10575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J5M86_10565 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D J5M86_10570 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D J5M86_12210 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D J5M86_00615 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_10510 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_13130 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_08985 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J5M86_12450 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5M86_09325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5M86_02885 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5M86_07165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D J5M86_10080 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J5M86_10075 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D J5M86_07935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J5M86_09040 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_07960 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D J5M86_00600 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D J5M86_00655 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D J5M86_00650 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D J5M86_05275 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D J5M86_00240 solA; N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D J5M86_00630 FAD-dependent oxidoreductase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D J5M86_00620 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D J5M86_00635 soxG; sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D J5M86_00625 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D J5M86_03290 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J5M86_05250 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J5M86_00105 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J5M86_06750 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J5M86_06745 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J5M86_08015 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:yim00270] D J5M86_01095 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J5M86_01090 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D J5M86_10520 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D J5M86_08000 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D J5M86_03290 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J5M86_07315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J5M86_06620 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5M86_09815 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D J5M86_02995 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D J5M86_09180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J5M86_04520 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J5M86_01580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5M86_01585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_01590 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_10575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J5M86_09265 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J5M86_03370 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_04840 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_09310 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D J5M86_06065 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D J5M86_08415 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_10160 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_14065 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_05875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_11280 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D J5M86_03680 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5M86_05250 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J5M86_09325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5M86_02885 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:yim00280] D J5M86_08415 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_10160 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_13205 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_00875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_13210 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_00880 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_13285 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D J5M86_13215 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_00885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_05650 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J5M86_07865 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J5M86_04045 acyl-CoA dehydrogenase family protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J5M86_04005 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D J5M86_04125 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D J5M86_10395 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D J5M86_03245 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03250 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_13775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_02565 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J5M86_01625 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J5M86_01630 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:yim00290] D J5M86_00105 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J5M86_04805 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J5M86_04810 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J5M86_10165 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D J5M86_10180 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J5M86_10175 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J5M86_10170 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J5M86_07495 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J5M86_08415 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_10160 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_07925 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J5M86_05805 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D J5M86_10155 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:yim00300] D J5M86_10575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J5M86_01580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5M86_01585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_01590 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_09620 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J5M86_09710 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D J5M86_11185 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D J5M86_06285 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J5M86_05155 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D J5M86_11180 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J5M86_09470 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J5M86_10580 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J5M86_14565 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5M86_09215 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:yim00310] D J5M86_13275 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_13270 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_03540 succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_05320 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:yim00220] D J5M86_06290 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D J5M86_06430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J5M86_06300 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J5M86_01780 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_06580 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5M86_06575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5M86_04630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J5M86_13290 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D J5M86_00495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5M86_07925 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J5M86_02190 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D J5M86_06275 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D J5M86_11210 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D J5M86_06280 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D J5M86_06270 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D J5M86_06285 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:yim00330] D J5M86_00600 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D J5M86_09540 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D J5M86_09535 hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D J5M86_09815 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D J5M86_05810 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_14805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07890 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_02330 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D J5M86_02325 proline dehydrogenase family protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D J5M86_04615 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D J5M86_05555 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J5M86_05565 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D J5M86_07585 alpha/beta fold hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:yim00340] D J5M86_06685 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D J5M86_06680 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D J5M86_06720 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D J5M86_06190 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D J5M86_06185 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D J5M86_06700 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D J5M86_06175 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_10745 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D J5M86_06165 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D J5M86_13250 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D J5M86_13245 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D J5M86_13225 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:yim00350] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_04710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J5M86_04745 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J5M86_04735 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D J5M86_03540 succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_05320 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:yim00360] D J5M86_00845 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D J5M86_00850 hotdog fold thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D J5M86_09660 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D J5M86_09655 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D J5M86_09650 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D J5M86_09645 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D J5M86_09640 paaK; phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D J5M86_04385 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D J5M86_11145 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_13055 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_10405 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_04710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J5M86_01865 FAD-binding oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J5M86_11485 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D J5M86_14805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07890 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07075 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:yim00380] D J5M86_04425 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D J5M86_04430 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_13270 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_14805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07890 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_14120 catalase K03781 katE; catalase [EC:1.11.1.6] D J5M86_11485 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:yim00400] D J5M86_08840 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J5M86_06525 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D J5M86_01005 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D J5M86_06520 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D J5M86_10730 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D J5M86_06515 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D J5M86_06725 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J5M86_08910 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D J5M86_06190 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D J5M86_06740 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D J5M86_06750 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J5M86_06745 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J5M86_08015 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J5M86_12735 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D J5M86_08055 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J5M86_14510 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:yim00410] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_09805 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_02140 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J5M86_13235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_12090 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D J5M86_13775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:yim00430] D J5M86_10415 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J5M86_09805 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D J5M86_04630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J5M86_01020 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5M86_01015 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:yim00450] D J5M86_03370 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_04840 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J5M86_08000 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D J5M86_07315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J5M86_07085 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D J5M86_15095 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J5M86_11945 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J5M86_11950 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J5M86_11955 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D J5M86_00425 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D J5M86_00435 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D J5M86_03095 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:yim00460] D J5M86_12130 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D J5M86_10415 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J5M86_00615 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_10510 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:yim00470] D J5M86_03455 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J5M86_04850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5M86_01780 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D J5M86_10125 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J5M86_09205 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5M86_13150 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D J5M86_09470 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J5M86_10580 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J5M86_01865 FAD-binding oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:yim00480] D J5M86_10415 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J5M86_08220 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D J5M86_09045 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J5M86_12165 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_02880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_09930 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_03690 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J5M86_00015 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J5M86_13685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_02515 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_07020 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_09815 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:yim00515] D J5M86_03075 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:yim00514] D J5M86_03075 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:yim00542] D J5M86_10505 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:yim00541] D J5M86_03015 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J5M86_00835 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_02355 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5M86_04165 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5M86_11935 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5M86_11930 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5M86_11925 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D J5M86_12595 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D J5M86_12470 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5M86_03970 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_04360 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5M86_03840 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5M86_03185 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J5M86_04220 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:yim00550] D J5M86_08555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5M86_12035 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5M86_09190 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J5M86_09205 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5M86_14565 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5M86_04850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5M86_09215 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J5M86_05840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J5M86_09850 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5M86_09210 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5M86_09195 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J5M86_09790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5M86_09220 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5M86_00180 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D J5M86_02045 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:yim00552] D J5M86_09850 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5M86_10505 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D J5M86_04230 glycosyltransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D J5M86_04235 glycosyltransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D J5M86_01180 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:yim00543] D J5M86_10505 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D J5M86_01095 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J5M86_04185 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:yim00730] D J5M86_05225 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D J5M86_05230 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D J5M86_10255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J5M86_08580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J5M86_05215 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D J5M86_05210 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D J5M86_04865 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D J5M86_10735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J5M86_11710 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:yim00740] D J5M86_05490 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D J5M86_00735 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D J5M86_05215 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D J5M86_14180 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:yim00750] D J5M86_02890 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D J5M86_14720 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D J5M86_02885 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5M86_10570 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D J5M86_08175 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D J5M86_08165 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:yim00760] D J5M86_05720 FAD-binding protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D J5M86_05725 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D J5M86_05715 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D J5M86_04760 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D J5M86_03975 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D J5M86_14675 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D J5M86_12175 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5M86_00675 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5M86_03800 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D J5M86_05575 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D J5M86_10995 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D J5M86_13595 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D J5M86_09570 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D J5M86_04755 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D J5M86_06370 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D J5M86_03540 succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J5M86_05320 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:yim00770] D J5M86_10180 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J5M86_10175 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J5M86_10170 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J5M86_07495 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J5M86_06145 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D J5M86_02140 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J5M86_03430 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D J5M86_06615 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D J5M86_04890 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D J5M86_06905 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D J5M86_03440 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D J5M86_01650 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D J5M86_08415 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_10160 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_13235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:yim00780] D J5M86_05990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5M86_12075 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_12150 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_04270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_07140 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_14415 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J5M86_14410 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J5M86_14420 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D J5M86_14395 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] C 00785 Lipoic acid metabolism [PATH:yim00785] D J5M86_09075 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D J5M86_09080 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D J5M86_00710 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_06030 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J5M86_09060 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J5M86_10650 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D J5M86_13205 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_00875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J5M86_13210 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_00880 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J5M86_13285 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D J5M86_13215 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_00885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J5M86_07935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J5M86_09040 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5M86_07960 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:yim00790] D J5M86_02070 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D J5M86_02080 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D J5M86_02075 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J5M86_05385 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J5M86_09630 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J5M86_09860 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D J5M86_00165 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D J5M86_08420 chorismate-binding protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D J5M86_01490 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J5M86_07125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J5M86_03025 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D J5M86_10950 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J5M86_03020 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:yim00670] D J5M86_09630 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J5M86_11295 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D J5M86_03670 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J5M86_00615 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_10510 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5M86_03660 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J5M86_03665 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5M86_06635 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J5M86_09040 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5M86_07315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J5M86_09625 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J5M86_00640 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J5M86_09425 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J5M86_08820 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J5M86_03010 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:yim00860] D J5M86_04775 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5M86_02375 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D J5M86_00760 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J5M86_02415 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J5M86_02390 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J5M86_02380 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D J5M86_08530 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D J5M86_08515 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D J5M86_08645 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D J5M86_08510 chlorite dismutase family protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D J5M86_02385 bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D J5M86_12865 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D J5M86_07040 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J5M86_07045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D J5M86_10425 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J5M86_09035 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D J5M86_06060 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D J5M86_13060 sigma 54-interacting transcriptional regulator K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D J5M86_08305 hypothetical protein K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-] D J5M86_07670 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:yim00130] D J5M86_02620 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D J5M86_02615 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D J5M86_02595 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D J5M86_02475 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D J5M86_02455 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D J5M86_02485 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D J5M86_02450 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D J5M86_04710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:yim00900] D J5M86_08580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J5M86_05345 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D J5M86_12430 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D J5M86_03120 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D J5M86_05360 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D J5M86_11415 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_01710 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D J5M86_01750 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5M86_08825 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5M86_03415 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D J5M86_05840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:yim00906] D J5M86_01745 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D J5M86_01720 glycosyltransferase K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-] D J5M86_01715 hypothetical protein K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:yim00907] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_02565 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D J5M86_07035 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:yim00523] D J5M86_11935 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5M86_11930 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5M86_11925 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:yim01054] D J5M86_13150 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D J5M86_02615 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics [PATH:yim01055] D J5M86_08715 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D J5M86_11930 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:yim00946] D J5M86_12130 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D J5M86_13145 pucL; urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:yim00311] D J5M86_05170 aminotransferase class V-fold PLP-dependent enzyme K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17] D J5M86_12160 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:yim00332] D J5M86_05555 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J5M86_05565 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:yim00261] D J5M86_08715 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D J5M86_11945 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J5M86_11950 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J5M86_11955 cysC; adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D J5M86_01580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5M86_01585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_01590 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5M86_09620 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J5M86_09710 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:yim00521] D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_10340 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5M86_14305 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D J5M86_08640 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J5M86_15055 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D J5M86_11935 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5M86_11930 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5M86_11925 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D J5M86_08865 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D J5M86_08870 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:yim00525] D J5M86_11935 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5M86_11930 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:yim00401] D J5M86_08055 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D J5M86_06725 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D J5M86_06005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5M86_12075 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_12150 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_04270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_07140 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D J5M86_04260 acyl carrier protein K02078 acpP; acyl carrier protein D J5M86_05995 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:yim00999] D J5M86_06620 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5M86_12130 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:yim00362] D J5M86_12475 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J5M86_13270 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D J5M86_13055 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_10405 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:yim00627] D J5M86_13680 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D J5M86_14805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07890 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_09480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:yim00364] D J5M86_13725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:yim00625] D J5M86_03955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J5M86_13430 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D J5M86_04730 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D J5M86_06630 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:yim00361] D J5M86_13725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D J5M86_06630 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:yim00623] D J5M86_13725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D J5M86_08545 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:yim00643] D J5M86_04745 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J5M86_04735 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D J5M86_14805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J5M86_07890 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation D J5M86_10280 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation D J5M86_03545 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:yim03020] D J5M86_11980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5M86_11975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5M86_11565 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J5M86_06610 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D J5M86_02560 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:yim03010] D J5M86_06895 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J5M86_05160 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J5M86_11790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J5M86_11570 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J5M86_11735 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J5M86_14285 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J5M86_11890 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J5M86_11750 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J5M86_11520 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J5M86_11825 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J5M86_11575 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J5M86_11895 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J5M86_11580 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J5M86_11755 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J5M86_09750 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J5M86_05020 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J5M86_11775 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J5M86_14275 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J5M86_11800 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J5M86_09415 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J5M86_12005 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J5M86_11805 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J5M86_11820 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J5M86_11815 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J5M86_11760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J5M86_11745 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J5M86_11990 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J5M86_14270 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J5M86_11995 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J5M86_12010 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J5M86_11525 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J5M86_11770 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J5M86_11725 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J5M86_11785 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J5M86_11560 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J5M86_11740 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J5M86_05095 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J5M86_06250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J5M86_05535 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J5M86_11795 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J5M86_11810 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J5M86_11765 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J5M86_03195 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D J5M86_05540 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J5M86_04870 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J5M86_11780 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J5M86_11730 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J5M86_10545 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J5M86_04900 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J5M86_12055 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J5M86_15140 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J5M86_06245 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J5M86_11585 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J5M86_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5M86_03300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5M86_06325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5M86_03305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:yim00970] D J5M86_03050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_05595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_10045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_10590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_02965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_01395 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_05910 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J5M86_12660 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5M86_08455 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J5M86_04785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5M86_03145 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5M86_12655 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J5M86_04790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J5M86_09905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_08430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_08460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_01025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_10060 tRNA-His K14226 tRNA-His; tRNA His D J5M86_00075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5M86_07255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_06775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_10100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_00215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_03260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_10070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5M86_12610 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5M86_10915 tRNA-Met K14230 tRNA-Met; tRNA Met D J5M86_05975 tRNA-Ile K14230 tRNA-Met; tRNA Met D J5M86_12060 tRNA-Met K14230 tRNA-Met; tRNA Met D J5M86_12665 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J5M86_09910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_08010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_01825 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_01185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_12300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_12065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_02015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_12025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J5M86_12115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J5M86_08405 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_08425 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_08450 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_06045 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_00430 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D J5M86_04775 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5M86_10205 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J5M86_10200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D J5M86_10210 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D J5M86_06495 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5M86_06440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5M86_03365 glycine--tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5M86_08255 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5M86_14485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5M86_00435 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D J5M86_12405 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5M86_03095 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5M86_06635 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J5M86_09880 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5M86_09405 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5M86_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5M86_03310 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5M86_12740 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D J5M86_00810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5M86_05400 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5M86_08090 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5M86_06260 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5M86_06265 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5M86_06310 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5M86_03805 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5M86_09495 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:yim03060] D J5M86_11720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5M86_12020 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5M86_07000 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5M86_08135 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J5M86_08130 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J5M86_08140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5M86_15125 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5M86_04570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5M86_04970 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J5M86_01550 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D J5M86_04940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5M86_08880 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D J5M86_07435 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J5M86_11110 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D J5M86_07440 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D J5M86_05100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_05105 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_05110 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_09150 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:yim04122] D J5M86_10255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J5M86_14065 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_05875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J5M86_10250 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J5M86_10950 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J5M86_07125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J5M86_12525 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D J5M86_11015 moeB; molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D J5M86_03025 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome [PATH:yim03050] D J5M86_07345 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D J5M86_07380 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D J5M86_07375 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:yim03018] D J5M86_05530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5M86_09745 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J5M86_07230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5M86_10560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J5M86_09615 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D J5M86_12965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5M86_02850 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03505 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_12540 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J5M86_00300 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J5M86_11330 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J5M86_15065 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:yim03030] D J5M86_14355 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_08900 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_09135 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5M86_01555 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5M86_01995 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5M86_09420 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5M86_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5M86_14245 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J5M86_05900 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06060 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D J5M86_05115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:yim03410] D J5M86_01895 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J5M86_12185 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J5M86_02250 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J5M86_06305 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J5M86_04910 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J5M86_14730 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J5M86_00100 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J5M86_09560 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J5M86_13495 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J5M86_11165 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J5M86_01760 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J5M86_12880 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5M86_00590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:yim03420] D J5M86_03210 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J5M86_14130 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5M86_06955 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5M86_06920 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J5M86_06965 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J5M86_03625 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_10990 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_11005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5M86_02560 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:yim03430] D J5M86_03625 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_10990 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_11005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_11420 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J5M86_11425 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_09135 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5M86_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5M86_01555 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5M86_09420 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5M86_01995 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5M86_14355 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_08900 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:yim03440] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_00025 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D J5M86_05835 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J5M86_01570 recR; recombination protein RecR K06187 recR; recombination protein RecR D J5M86_09525 recA; recombinase RecA K03553 recA; recombination protein RecA D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_08150 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J5M86_08145 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J5M86_08155 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J5M86_04880 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J5M86_00310 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J5M86_00305 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J5M86_00315 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J5M86_09135 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5M86_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5M86_01555 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5M86_09420 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5M86_01995 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5M86_14355 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_08900 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_06625 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:yim03450] D J5M86_02165 Ku protein K10979 ku; DNA end-binding protein Ku D J5M86_02155 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D J5M86_02160 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:yim03250] D J5M86_00145 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:yim02010] D J5M86_11700 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J5M86_11695 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D J5M86_11690 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J5M86_13190 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D J5M86_13185 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D J5M86_13180 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D J5M86_05280 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D J5M86_05295 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D J5M86_05290 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D J5M86_05285 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D J5M86_01055 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D J5M86_01045 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D J5M86_01050 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D J5M86_01040 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J5M86_12365 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_11465 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_12360 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D J5M86_12355 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D J5M86_12350 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D J5M86_11480 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D J5M86_11475 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D J5M86_11470 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D J5M86_01470 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D J5M86_01460 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D J5M86_01465 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_03865 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D J5M86_03875 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D J5M86_03880 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D J5M86_03870 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D J5M86_00480 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D J5M86_12550 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D J5M86_12555 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D J5M86_12560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D J5M86_12565 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J5M86_01600 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D J5M86_03525 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D J5M86_01605 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein D J5M86_01610 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D J5M86_01595 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D J5M86_01695 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein D J5M86_01700 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D J5M86_06795 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D J5M86_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D J5M86_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D J5M86_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D J5M86_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D J5M86_14800 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D J5M86_14790 ABC transporter permease K02072 metI; D-methionine transport system permease protein D J5M86_14795 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D J5M86_01235 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D J5M86_01230 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D J5M86_01225 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D J5M86_01220 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D J5M86_05860 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D J5M86_05850 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D J5M86_05855 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D J5M86_00295 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D J5M86_11455 PDGLE domain-containing protein K02009 cbiN; cobalt/nickel transport protein D J5M86_11460 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D J5M86_11450 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D J5M86_11445 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D J5M86_04085 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D J5M86_09775 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D J5M86_05075 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D J5M86_05080 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D J5M86_05070 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D J5M86_13355 ABC transporter permease K09813 hrtB; hemin transport system permease protein D J5M86_13350 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D J5M86_10795 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5M86_10800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J5M86_01060 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01355 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01065 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01360 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_14580 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J5M86_14585 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D J5M86_11985 ABC transporter ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D J5M86_13475 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:yim02060] D J5M86_13025 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J5M86_13020 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D J5M86_06350 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J5M86_13015 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J5M86_13010 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J5M86_00680 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:yim03070] D J5M86_08135 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J5M86_08130 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J5M86_12020 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5M86_07000 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5M86_11720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5M86_08140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5M86_15125 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5M86_04570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5M86_04940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5M86_04970 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J5M86_07435 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J5M86_11110 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D J5M86_07440 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:yim02020] D J5M86_12440 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D J5M86_12445 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D J5M86_12550 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D J5M86_07045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D J5M86_02865 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D J5M86_11115 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D J5M86_04530 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D J5M86_04525 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D J5M86_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J5M86_04665 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J5M86_09030 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J5M86_04460 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04465 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04475 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04470 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D J5M86_01340 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_01345 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_01335 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D J5M86_04435 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D J5M86_04445 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D J5M86_01925 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D J5M86_10840 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D J5M86_01930 hypothetical protein K12510 tadB; tight adherence protein B D J5M86_10835 type II secretion system F family protein K12510 tadB; tight adherence protein B D J5M86_10830 type II secretion system F family protein K12511 tadC; tight adherence protein C D J5M86_04965 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D J5M86_04960 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_01890 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J5M86_01780 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D J5M86_14595 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J5M86_14590 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J5M86_14430 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J5M86_11965 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:yim02024] D J5M86_06725 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J5M86_08840 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J5M86_15255 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D J5M86_02230 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D J5M86_02240 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D J5M86_02235 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D J5M86_02245 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D J5M86_06795 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D J5M86_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D J5M86_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D J5M86_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D J5M86_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D J5M86_11665 tandem-95 repeat protein K20276 bapA; large repetitive protein D J5M86_13925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_14750 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_05500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_11085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_01890 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J5M86_06475 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J5M86_11255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J5M86_06480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D J5M86_11260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D J5M86_06470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J5M86_11265 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J5M86_06485 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D J5M86_11270 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D J5M86_06490 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D J5M86_11275 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D J5M86_15125 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5M86_12020 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5M86_07000 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5M86_11720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5M86_08140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5M86_04570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5M86_04940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5M86_04970 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:yim02040] D J5M86_01695 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein D J5M86_09255 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:yim04980] D J5M86_10425 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J5M86_03255 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D J5M86_03245 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_03250 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D J5M86_07315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:yim01501] D J5M86_03485 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J5M86_14570 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D J5M86_14575 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J5M86_12160 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J5M86_09790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5M86_09220 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:yim01502] D J5M86_04850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5M86_03455 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J5M86_09215 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J5M86_09210 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5M86_09195 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance D J5M86_00145 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:yim01000] C 01001 Protein kinases [BR:yim01001] D J5M86_09305 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J5M86_13155 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_00170 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_00175 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_04020 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_05980 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_09065 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_11545 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5M86_14550 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D J5M86_13035 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D J5M86_03735 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D J5M86_12440 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D J5M86_04530 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D J5M86_01195 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J5M86_01340 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_01345 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_04435 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D J5M86_07840 GHKL domain-containing protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D J5M86_10595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D J5M86_04635 sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:yim01009] D J5M86_04520 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J5M86_00190 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D J5M86_11640 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D J5M86_07165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:yim01002] D J5M86_09150 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D J5M86_12295 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J5M86_03565 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J5M86_08210 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D J5M86_02900 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_14255 peptidoglycan-binding protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_14260 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_06935 C40 family peptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D J5M86_12685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J5M86_06760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J5M86_03435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5M86_10440 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J5M86_11355 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D J5M86_13435 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D J5M86_14045 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D J5M86_12165 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_02880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_09930 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J5M86_06150 immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-] D J5M86_03265 snapalysin family zinc-dependent metalloprotease K01416 snpA; snapalysin [EC:3.4.24.77] D J5M86_02570 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J5M86_01295 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J5M86_10755 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J5M86_10760 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J5M86_09045 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J5M86_09585 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J5M86_11180 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J5M86_04715 M20/M25/M40 family metallo-hydrolase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D J5M86_04925 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J5M86_06120 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J5M86_11705 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J5M86_11065 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J5M86_02065 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J5M86_12180 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D J5M86_14570 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D J5M86_10050 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-] D J5M86_04695 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D J5M86_02865 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D J5M86_11115 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D J5M86_02045 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D J5M86_09890 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J5M86_09895 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J5M86_10945 PDZ domain-containing protein K07177 K07177; Lon-like protease D J5M86_09375 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J5M86_05100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_05105 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_05110 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5M86_07585 alpha/beta fold hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D J5M86_14030 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21] D J5M86_15015 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D J5M86_07160 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D J5M86_05355 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D J5M86_10115 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D J5M86_07380 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D J5M86_07375 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D J5M86_10415 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:yim01003] D J5M86_07475 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D J5M86_03075 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D J5M86_03760 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D J5M86_08185 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D J5M86_03835 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D J5M86_03775 glycosyltransferase family 4 protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D J5M86_07175 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D J5M86_10505 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D J5M86_14525 DUF2029 domain-containing protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D J5M86_14535 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D J5M86_04185 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D J5M86_13675 glycosyltransferase family 4 protein K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393] C 01005 Lipopolysaccharide biosynthesis proteins [BR:yim01005] D J5M86_10505 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:yim01011] D J5M86_08555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5M86_12035 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5M86_09190 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J5M86_09205 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5M86_14565 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5M86_04850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5M86_03455 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J5M86_10125 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J5M86_05355 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D J5M86_10115 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D J5M86_09210 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5M86_09195 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J5M86_09850 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5M86_15080 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D J5M86_06395 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D J5M86_09790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5M86_09220 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5M86_00180 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D J5M86_02045 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J5M86_02900 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_14255 peptidoglycan-binding protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_14260 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D J5M86_06505 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:yim01004] D J5M86_06005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5M86_06000 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J5M86_05990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5M86_12075 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_12150 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_04270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_07140 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5M86_10660 G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J5M86_09965 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D J5M86_07145 fabI; enoyl-ACP reductase FabI K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118] D J5M86_13415 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J5M86_05960 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J5M86_08690 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_10625 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J5M86_05235 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D J5M86_13925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_14750 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_05500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_11085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_13470 long-chain-acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J5M86_13605 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J5M86_14320 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J5M86_01560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_07820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08045 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5M86_08845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:yim01008] D J5M86_05170 aminotransferase class V-fold PLP-dependent enzyme K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17] D J5M86_08715 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D J5M86_13150 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:yim01006] D J5M86_08825 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5M86_01750 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5M86_03415 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D J5M86_05840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J5M86_01745 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D J5M86_09475 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5M86_02450 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D J5M86_07040 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:yim01007] D J5M86_12740 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D J5M86_04775 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5M86_06310 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5M86_03805 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5M86_09495 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5M86_12405 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5M86_00810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5M86_03095 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5M86_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5M86_09880 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5M86_09405 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5M86_03310 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5M86_06440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5M86_08090 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5M86_14485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5M86_05400 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5M86_08255 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5M86_06495 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5M86_06260 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5M86_06265 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5M86_07925 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J5M86_05155 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D J5M86_00870 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_06170 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J5M86_10080 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J5M86_14415 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J5M86_08000 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D J5M86_06285 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J5M86_14350 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D J5M86_05810 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J5M86_14410 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J5M86_00760 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J5M86_02415 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J5M86_08415 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_10160 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5M86_02885 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5M86_12595 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:yim00194] D J5M86_10435 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J5M86_10460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J5M86_10465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J5M86_10470 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J5M86_10475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J5M86_10480 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J5M86_10485 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J5M86_10490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J5M86_10495 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:yim03000] D J5M86_13495 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J5M86_13005 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D J5M86_00235 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J5M86_09680 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D J5M86_07460 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J5M86_12950 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D J5M86_09970 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D J5M86_00280 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D J5M86_00970 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J5M86_05845 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J5M86_12265 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D J5M86_13100 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D J5M86_01890 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J5M86_00900 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D J5M86_05010 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D J5M86_09565 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D J5M86_02895 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D J5M86_14575 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J5M86_14675 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D J5M86_02370 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D J5M86_08035 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator D J5M86_01845 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D J5M86_04325 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D J5M86_04640 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D J5M86_10980 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D J5M86_14455 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D J5M86_15105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J5M86_12425 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D J5M86_06295 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D J5M86_05740 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D J5M86_11140 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D J5M86_06560 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D J5M86_04675 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D J5M86_09365 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D J5M86_09235 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:yim03021] D J5M86_02560 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D J5M86_11565 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J5M86_11980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5M86_11975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5M86_06610 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J5M86_09255 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D J5M86_00705 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5M86_03510 shbA; RNA polymerase sigma factor ShbA K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5M86_05050 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5M86_15085 sigM; RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5M86_10715 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5M86_05450 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J5M86_06540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J5M86_12015 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D J5M86_01960 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D J5M86_14550 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D J5M86_03390 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D J5M86_10560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:yim03019] D J5M86_05530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J5M86_04905 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5M86_09615 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D J5M86_03850 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J5M86_10055 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D J5M86_07230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5M86_09745 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J5M86_10560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J5M86_12965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5M86_02850 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03505 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_12540 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J5M86_00300 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J5M86_11330 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J5M86_15065 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D J5M86_06970 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D J5M86_07445 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D J5M86_09295 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:yim03011] D J5M86_06895 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J5M86_05160 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J5M86_11790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J5M86_11570 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J5M86_11735 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J5M86_14285 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J5M86_11890 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J5M86_11750 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J5M86_11520 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J5M86_11825 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J5M86_11575 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J5M86_11895 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J5M86_11580 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J5M86_11755 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J5M86_09750 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J5M86_05020 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J5M86_11775 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J5M86_14275 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J5M86_11800 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J5M86_09415 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J5M86_12005 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J5M86_11805 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J5M86_11820 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J5M86_11815 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J5M86_11760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J5M86_11745 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J5M86_14270 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J5M86_11995 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J5M86_12010 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J5M86_11990 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J5M86_11525 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J5M86_11770 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J5M86_11725 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J5M86_11785 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J5M86_11560 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J5M86_11740 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J5M86_05095 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J5M86_06250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J5M86_05535 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J5M86_11795 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J5M86_11810 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J5M86_11765 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J5M86_05540 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J5M86_04870 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J5M86_11780 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J5M86_11730 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J5M86_10545 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J5M86_04900 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J5M86_12055 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J5M86_15140 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J5M86_06245 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J5M86_11585 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J5M86_03195 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D J5M86_06325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5M86_03305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5M86_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5M86_03300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:yim03009] D J5M86_04905 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5M86_09305 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J5M86_10055 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D J5M86_05770 era; GTPase Era K03595 era; GTPase D J5M86_05545 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D J5M86_05450 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J5M86_06540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J5M86_12015 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D J5M86_03115 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D J5M86_06640 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D J5M86_09465 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D J5M86_11340 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D J5M86_04885 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D J5M86_05750 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J5M86_15115 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J5M86_09230 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D J5M86_03080 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D J5M86_06365 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D J5M86_12400 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D J5M86_05195 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D J5M86_07850 methyltransferase domain-containing protein K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D J5M86_07855 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J5M86_08060 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J5M86_09145 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J5M86_12170 rRNA methyltransferase K21514 aviRb; 23S rRNA (uridine2479-2'-O)-methyltransferase [EC:2.1.1.208] D J5M86_03475 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D J5M86_13880 RimK family alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D J5M86_05035 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D J5M86_09580 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D J5M86_14955 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D J5M86_05530 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J5M86_06500 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D J5M86_10735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J5M86_08040 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D J5M86_09455 hflX; GTPase HflX K03665 hflX; GTPase D J5M86_10515 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J5M86_08120 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5M86_05480 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D J5M86_05445 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D J5M86_05580 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D J5M86_05760 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D J5M86_11385 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D J5M86_04895 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:yim03016] D J5M86_03850 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J5M86_09485 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D J5M86_04775 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5M86_05400 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5M86_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5M86_09405 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5M86_03095 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5M86_00810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5M86_03310 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5M86_06440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5M86_06495 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5M86_08255 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5M86_14485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5M86_12405 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5M86_09880 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5M86_08090 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5M86_06260 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5M86_06265 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5M86_06310 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5M86_03805 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5M86_09495 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5M86_12485 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D J5M86_09105 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J5M86_07340 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D J5M86_05690 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D J5M86_11540 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D J5M86_05485 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D J5M86_10255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J5M86_10515 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J5M86_09475 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5M86_00425 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D J5M86_15135 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D J5M86_06085 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D J5M86_10110 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D J5M86_08540 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D J5M86_14635 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D J5M86_12740 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D J5M86_03365 glycine--tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5M86_13240 YbaK/EbsC family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D J5M86_07465 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D J5M86_01440 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D J5M86_09505 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D J5M86_05040 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D J5M86_14630 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D J5M86_09725 class I SAM-dependent methyltransferase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D J5M86_14465 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D J5M86_06255 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D J5M86_07855 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J5M86_10250 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J5M86_12505 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D J5M86_02055 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D J5M86_03470 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D J5M86_03480 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D J5M86_03465 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D J5M86_09745 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:yim03012] D J5M86_05460 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J5M86_06240 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J5M86_05165 elongation factor Ts K02357 tsf; elongation factor Ts D J5M86_11880 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5M86_11885 fusA; elongation factor G K02355 fusA; elongation factor G D J5M86_00440 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D J5M86_10540 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D J5M86_05185 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D J5M86_10535 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D J5M86_03200 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D J5M86_11590 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D J5M86_06535 efp; elongation factor P K02356 efp; elongation factor P D J5M86_10805 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D J5M86_13975 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:yim03110] D J5M86_12910 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D J5M86_02180 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D J5M86_09885 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D J5M86_12965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5M86_02850 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03505 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_12955 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D J5M86_05745 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J5M86_12960 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J5M86_03500 groES; co-chaperone GroES K04078 groES; chaperonin GroES D J5M86_10085 co-chaperone GroES K04078 groES; chaperonin GroES D J5M86_02065 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J5M86_10490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J5M86_00145 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D J5M86_08100 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D J5M86_13625 trxA; thioredoxin K03671 TXN; thioredoxin D J5M86_15100 trxA; thioredoxin K03671 TXN; thioredoxin D J5M86_10365 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:yim04131] D J5M86_09845 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J5M86_14520 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D J5M86_08880 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D J5M86_06985 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5M86_12450 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5M86_06770 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5M86_07490 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:yim04121] D J5M86_07370 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:yim03051] D J5M86_07380 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D J5M86_07375 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D J5M86_07345 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D J5M86_07405 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D J5M86_07425 WYL domain-containing protein K13572 pafB; proteasome accessory factor B D J5M86_07430 WYL domain-containing protein K13573 pafC; proteasome accessory factor C D J5M86_07365 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:yim03032] D J5M86_01100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_04815 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5M86_14245 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J5M86_05900 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_09135 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5M86_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5M86_09420 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5M86_01995 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5M86_14355 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_08900 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_01555 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5M86_06060 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D J5M86_05115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5M86_00065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5M86_08730 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5M86_00060 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5M86_08785 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5M86_00565 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J5M86_01970 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:yim03036] D J5M86_04905 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5M86_02150 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2 D J5M86_01100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_04815 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5M86_05945 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D J5M86_07460 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J5M86_04930 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D J5M86_08070 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D J5M86_08065 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D J5M86_10800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J5M86_09220 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5M86_09595 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J5M86_10845 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J5M86_11620 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J5M86_09200 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D J5M86_10795 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5M86_09185 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5M86_09170 cell division protein SepF K09772 sepF; cell division inhibitor SepF D J5M86_09810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5M86_09800 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D J5M86_05495 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D J5M86_15110 AAA family ATPase K03496 parA; chromosome partitioning protein D J5M86_15145 ParA family protein K03496 parA; chromosome partitioning protein D J5M86_08075 ParA family protein K03496 parA; chromosome partitioning protein D J5M86_15105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J5M86_15115 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J5M86_05145 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D J5M86_07615 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC D J5M86_08080 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D J5M86_11105 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D J5M86_06980 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:yim03400] D J5M86_13800 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J5M86_03595 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J5M86_08250 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D J5M86_12185 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J5M86_06305 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J5M86_02250 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J5M86_01895 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J5M86_02560 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D J5M86_13370 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5M86_13700 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5M86_00400 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5M86_00860 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5M86_11285 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5M86_08630 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J5M86_07595 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D J5M86_01760 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J5M86_13495 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J5M86_11165 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J5M86_04910 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J5M86_14730 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J5M86_00100 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J5M86_09560 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J5M86_12880 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5M86_00590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5M86_10235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5M86_06835 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5M86_14130 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5M86_06955 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5M86_06920 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J5M86_06965 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J5M86_03625 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_10990 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_11005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5M86_11980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5M86_11975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5M86_11565 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J5M86_06610 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J5M86_03210 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J5M86_11420 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J5M86_11425 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J5M86_09135 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5M86_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5M86_09420 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5M86_01995 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5M86_14355 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_08900 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5M86_01555 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_00310 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J5M86_00305 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J5M86_00315 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J5M86_09525 recA; recombinase RecA K03553 recA; recombination protein RecA D J5M86_08150 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J5M86_08145 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J5M86_08155 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J5M86_06625 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D J5M86_07920 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D J5M86_07915 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D J5M86_02260 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D J5M86_00025 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D J5M86_04880 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J5M86_05835 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J5M86_01570 recR; recombination protein RecR K06187 recR; recombination protein RecR D J5M86_06375 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D J5M86_01530 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D J5M86_02165 Ku protein K10979 ku; DNA end-binding protein Ku D J5M86_02155 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D J5M86_02160 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D J5M86_00065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5M86_08730 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5M86_00060 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5M86_08785 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5M86_00565 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J5M86_01970 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J5M86_01100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_04815 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5M86_07230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5M86_07235 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D J5M86_09375 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J5M86_03320 DNA polymerase Y family protein K14161 imuB; protein ImuB D J5M86_03315 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D J5M86_09520 regulatory protein RecX K03565 recX; regulatory protein D J5M86_09435 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D J5M86_09555 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D J5M86_12545 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D J5M86_13615 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D J5M86_06410 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D J5M86_00990 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_09360 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5M86_00985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:yim03029] D J5M86_05460 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J5M86_06240 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J5M86_05165 elongation factor Ts K02357 tsf; elongation factor Ts D J5M86_11880 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5M86_11885 fusA; elongation factor G K02355 fusA; elongation factor G D J5M86_05770 era; GTPase Era K03595 era; GTPase D J5M86_06310 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5M86_09405 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5M86_06440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5M86_00810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5M86_10205 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J5M86_10200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D J5M86_10210 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D J5M86_14280 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_15330 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_06340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_10015 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5M86_12965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5M86_12960 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J5M86_02850 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03505 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03500 groES; co-chaperone GroES K04078 groES; chaperonin GroES D J5M86_10085 co-chaperone GroES K04078 groES; chaperonin GroES D J5M86_12955 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D J5M86_05745 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J5M86_10255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J5M86_11105 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D J5M86_07040 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J5M86_07045 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D J5M86_15125 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:yim02000] D J5M86_01060 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01355 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01065 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_01360 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D J5M86_06710 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_07110 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_07385 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_07390 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_08270 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_08435 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5M86_14580 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J5M86_14585 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D J5M86_11985 ABC transporter ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D J5M86_13475 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein D J5M86_03125 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D J5M86_10770 FHA domain-containing protein K21397 K21397; ABC transport system ATP-binding/permease protein D J5M86_11700 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J5M86_11695 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D J5M86_11690 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J5M86_13190 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D J5M86_13185 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D J5M86_13180 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D J5M86_05280 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D J5M86_05295 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D J5M86_05290 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D J5M86_05285 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D J5M86_02230 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D J5M86_02240 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D J5M86_02235 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D J5M86_02245 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D J5M86_01055 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D J5M86_01045 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D J5M86_01050 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D J5M86_01040 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J5M86_12365 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_11465 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_12360 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D J5M86_12355 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D J5M86_12350 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D J5M86_11480 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D J5M86_11475 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D J5M86_11470 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D J5M86_01470 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D J5M86_01460 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D J5M86_01465 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_03865 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D J5M86_03875 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D J5M86_03880 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D J5M86_03870 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D J5M86_00915 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D J5M86_15045 substrate-binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D J5M86_15040 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D J5M86_15035 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D J5M86_12550 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D J5M86_12555 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D J5M86_12560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D J5M86_12565 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J5M86_01600 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D J5M86_03525 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D J5M86_01605 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein D J5M86_01610 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D J5M86_01595 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D J5M86_01695 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein D J5M86_01700 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D J5M86_06795 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D J5M86_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D J5M86_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D J5M86_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D J5M86_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D J5M86_14800 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D J5M86_14790 ABC transporter permease K02072 metI; D-methionine transport system permease protein D J5M86_14795 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D J5M86_13085 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D J5M86_13315 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D J5M86_00245 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D J5M86_04400 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D J5M86_10665 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D J5M86_13305 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D J5M86_13310 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D J5M86_00250 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D J5M86_04395 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D J5M86_10670 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D J5M86_13300 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D J5M86_00255 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D J5M86_10675 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D J5M86_06475 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J5M86_11255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J5M86_06480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D J5M86_11260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D J5M86_06470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J5M86_11265 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J5M86_06485 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D J5M86_11270 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D J5M86_06490 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D J5M86_11275 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D J5M86_01235 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D J5M86_01230 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D J5M86_01225 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D J5M86_01220 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D J5M86_13590 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D J5M86_13580 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D J5M86_13585 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein D J5M86_13575 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D J5M86_09445 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D J5M86_09440 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D J5M86_07185 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D J5M86_09450 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D J5M86_05860 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D J5M86_05850 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D J5M86_05855 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D J5M86_00295 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D J5M86_11455 PDGLE domain-containing protein K02009 cbiN; cobalt/nickel transport protein D J5M86_11450 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D J5M86_11460 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D J5M86_11445 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D J5M86_04075 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component D J5M86_09765 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component D J5M86_04085 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D J5M86_09775 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D J5M86_04080 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D J5M86_09770 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D J5M86_05075 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D J5M86_05080 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D J5M86_05070 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D J5M86_13355 ABC transporter permease K09813 hrtB; hemin transport system permease protein D J5M86_13350 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D J5M86_10795 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5M86_10800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J5M86_02220 ABC-2 family transporter protein K25154 evrC; viologen exporter family transport system permease protein D J5M86_02225 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein D J5M86_02205 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein D J5M86_11840 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_11850 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_01285 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_02495 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_03385 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_04190 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_04495 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_13950 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_14960 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_07050 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_10645 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_10925 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_11215 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5M86_04490 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_11835 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_11845 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_01290 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_02295 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_02490 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_03380 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_04195 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_13945 alpha/beta fold hydrolase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_14965 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_07055 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_10640 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_10920 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_11220 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5M86_01655 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D J5M86_05785 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D J5M86_13330 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J5M86_01660 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J5M86_05790 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J5M86_07080 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D J5M86_14265 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J5M86_03570 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D J5M86_00605 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D J5M86_11855 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D J5M86_04110 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D J5M86_04450 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D J5M86_04455 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D J5M86_12110 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D J5M86_13870 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J5M86_05680 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J5M86_12895 MFS transporter K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump D J5M86_09500 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D J5M86_07490 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D J5M86_11395 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D J5M86_13025 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J5M86_13020 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D J5M86_13015 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J5M86_06350 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J5M86_08710 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D J5M86_01210 aquaporin family protein K02440 glpF; glycerol uptake facilitator D J5M86_02270 NAD-binding protein K10716 kch; voltage-gated potassium channel D J5M86_04955 ammonium transporter K03320 amt; ammonium transporter, Amt family D J5M86_02975 substrate-binding domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D J5M86_02985 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D J5M86_09940 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D J5M86_01255 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D J5M86_07995 magnesium transporter CorA family protein K03284 corA; magnesium transporter D J5M86_13850 CrcB family protein K06199 crcB; fluoride exporter D J5M86_13855 CrcB family protein K06199 crcB; fluoride exporter D J5M86_10630 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_13915 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_05765 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_13910 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_10635 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_13730 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J5M86_12125 amino acid permease K11733 lysP; lysine-specific permease D J5M86_00695 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D J5M86_11970 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J5M86_00910 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J5M86_13900 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D J5M86_06930 EamA family transporter K11939 rhtA; inner membrane transporter RhtA D J5M86_02720 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D J5M86_07530 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D J5M86_08285 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D J5M86_08590 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D J5M86_09685 L-lactate permease K03303 lutP; lactate permease D J5M86_00660 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D J5M86_14855 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D J5M86_10610 cation acetate symporter K14393 actP; cation/acetate symporter D J5M86_10620 cation acetate symporter K14393 actP; cation/acetate symporter D J5M86_01910 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D J5M86_04100 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D J5M86_06910 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D J5M86_03005 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D J5M86_08610 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D J5M86_08615 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D J5M86_12260 purine permease K24206 uacT; uric acid transporter D J5M86_02535 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J5M86_14980 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D J5M86_08880 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D J5M86_06070 arsenic transporter K03893 arsB; arsenical pump membrane protein D J5M86_01690 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D J5M86_01685 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D J5M86_01680 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D J5M86_01675 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D J5M86_01670 sodium:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D J5M86_01665 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D J5M86_15080 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D J5M86_06395 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D J5M86_02905 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D J5M86_12290 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D J5M86_04845 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D J5M86_09670 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D J5M86_09675 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D J5M86_13375 AI-2E family transporter K20469 K20469; putative heme transporter D J5M86_11290 VIT family protein K22736 VIT; vacuolar iron transporter family protein D J5M86_09200 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D J5M86_14520 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D J5M86_10040 FTR1 family protein K07243 FTR; high-affinity iron transporter D J5M86_10035 EfeM/EfeO family lipoprotein K07224 efeO; iron uptake system component EfeO D J5M86_10030 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D J5M86_02430 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D J5M86_04460 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04465 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D J5M86_04475 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D J5M86_03735 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D J5M86_14670 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D J5M86_06675 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D J5M86_03580 flippase-like domain-containing protein K20468 K20468; putative heme transporter D J5M86_13135 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J5M86_12670 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:yim02044] D J5M86_12295 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J5M86_01925 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D J5M86_10840 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D J5M86_01930 hypothetical protein K12510 tadB; tight adherence protein B D J5M86_10835 type II secretion system F family protein K12510 tadB; tight adherence protein B D J5M86_10830 type II secretion system F family protein K12511 tadC; tight adherence protein C D J5M86_09165 YggT family protein K02221 yggT; YggT family protein D J5M86_09395 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D J5M86_09390 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D J5M86_15255 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D J5M86_04570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5M86_08135 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J5M86_12020 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5M86_08130 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J5M86_07000 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5M86_11720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5M86_04970 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J5M86_04940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5M86_08140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5M86_15125 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5M86_07435 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J5M86_11110 preprotein translocase subunit TatA K03117 tatB; sec-independent protein translocase protein TatB D J5M86_07440 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:yim02042] D J5M86_10630 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_13915 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_05765 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_13910 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_10635 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5M86_03410 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:yim02022] D J5M86_12440 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D J5M86_12445 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D J5M86_04530 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D J5M86_04525 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D J5M86_01195 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J5M86_01200 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D J5M86_01340 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_01345 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J5M86_01335 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D J5M86_04435 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D J5M86_04445 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D J5M86_07840 GHKL domain-containing protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D J5M86_10595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D J5M86_04635 sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D J5M86_06790 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:yim02035] D J5M86_01695 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein D J5M86_12295 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J5M86_01925 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D J5M86_10840 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:yim04812] D J5M86_09810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5M86_09185 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5M86_15110 AAA family ATPase K03496 parA; chromosome partitioning protein D J5M86_15145 ParA family protein K03496 parA; chromosome partitioning protein D J5M86_08075 ParA family protein K03496 parA; chromosome partitioning protein D J5M86_15105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:yim04147] D J5M86_03225 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5M86_06985 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5M86_06990 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J5M86_06770 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5M86_00145 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D J5M86_09585 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J5M86_02850 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_03505 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5M86_12965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5M86_07025 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5M86_03520 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5M86_03535 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5M86_11880 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5M86_09105 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J5M86_11280 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D J5M86_13925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_14750 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_05500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_11085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5M86_12080 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_03280 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_10390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J5M86_04520 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J5M86_11710 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J5M86_08125 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J5M86_06300 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J5M86_06430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J5M86_04735 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D J5M86_01640 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5M86_10320 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5M86_01215 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D J5M86_06155 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_09095 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5M86_02390 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J5M86_04710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J5M86_01490 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J5M86_09325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5M86_03665 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5M86_06220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_09055 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5M86_10265 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D J5M86_13290 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D J5M86_13685 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_02515 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_07020 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J5M86_06995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J5M86_12450 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:yim02048] D J5M86_01815 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D J5M86_14195 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D J5M86_01810 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J5M86_14200 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J5M86_01800 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D J5M86_14205 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D J5M86_08345 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D J5M86_08350 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D J5M86_00535 restriction endonuclease K07448 mrr; restriction system protein D J5M86_07550 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D J5M86_07555 hypothetical protein K26987 mazE7; antitoxin MazE7 D J5M86_07575 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K19156 prlF; antitoxin PrlF D J5M86_11375 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D J5M86_09185 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5M86_09810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5M86_04775 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5M86_10255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:yim04052] D J5M86_12945 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:yim01504] D J5M86_05425 kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D J5M86_13475 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein D J5M86_11000 phosphotransferase K06979 mph; macrolide phosphotransferase D J5M86_14570 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D J5M86_14575 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J5M86_12160 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J5M86_02400 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:yim00536] D J5M86_12495 hypothetical protein K16645 hbhA; heparin binding hemagglutinin HbhA C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:yim00537] D J5M86_09585 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:yim03100] D J5M86_03050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_05595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5M86_10045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_10590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_02965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_01395 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5M86_05910 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J5M86_12660 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5M86_08455 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J5M86_04785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5M86_03145 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5M86_12655 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J5M86_04790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J5M86_09905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_08430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_08460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_01025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5M86_10060 tRNA-His K14226 tRNA-His; tRNA His D J5M86_00075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5M86_07255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_06775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_10100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_00215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_03260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5M86_10070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5M86_12610 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5M86_10915 tRNA-Met K14230 tRNA-Met; tRNA Met D J5M86_05975 tRNA-Ile K14230 tRNA-Met; tRNA Met D J5M86_12060 tRNA-Met K14230 tRNA-Met; tRNA Met D J5M86_12665 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J5M86_09910 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_08010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_01825 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5M86_01185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_01500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J5M86_12300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_12065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_02015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5M86_12025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J5M86_12115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J5M86_08405 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_08425 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_08450 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_06045 tRNA-Val K14237 tRNA-Val; tRNA Val D J5M86_00430 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D J5M86_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5M86_06320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5M86_03300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5M86_06325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5M86_03305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5M86_01550 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D J5M86_06085 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D J5M86_04655 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D J5M86_12415 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D J5M86_04010 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D J5M86_14640 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D J5M86_02715 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-] D J5M86_10780 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D J5M86_00770 fgd; glucose-6-phosphate dehydrogenase (coenzyme-F420) K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D J5M86_08205 nitroreductase family deazaflavin-dependent oxidoreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D J5M86_11070 iron-containing alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24] D J5M86_00285 SDR family NAD(P)-dependent oxidoreductase K11168 DHRS12; dehydrogenase/reductase SDR family member 12 [EC:1.1.-.-] D J5M86_10850 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D J5M86_02625 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D J5M86_09410 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D J5M86_03980 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J5M86_12780 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J5M86_07885 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J5M86_04485 mtr; mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D J5M86_03350 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D J5M86_08505 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D J5M86_08995 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D J5M86_10095 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J5M86_00580 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D J5M86_06040 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D J5M86_01120 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J5M86_10685 sodN; superoxide dismutase, Ni K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1] D J5M86_03335 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D J5M86_13980 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D J5M86_03135 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D J5M86_13660 class I SAM-dependent methyltransferase K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365] D J5M86_12535 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D J5M86_13075 GNAT family N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D J5M86_04750 GNAT family N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D J5M86_07470 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D J5M86_09990 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D J5M86_09995 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D J5M86_08965 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D J5M86_12460 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D J5M86_03755 glycosyltransferase family 4 protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D J5M86_06755 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D J5M86_13520 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D J5M86_04875 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D J5M86_11865 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D J5M86_06160 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D J5M86_02255 disA; DNA integrity scanning diadenylate cyclase DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D J5M86_08850 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D J5M86_05260 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D J5M86_12995 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J5M86_09960 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J5M86_09345 HAD-IB family hydrolase K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51] D J5M86_05585 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D J5M86_11050 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D J5M86_10185 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D J5M86_03100 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J5M86_08725 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D J5M86_10410 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D J5M86_13665 prenyltransferase K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221] D J5M86_01405 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J5M86_10145 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D J5M86_12205 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D J5M86_03400 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D J5M86_03925 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J5M86_09240 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J5M86_11660 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J5M86_03445 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D J5M86_07415 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D J5M86_13840 cobalamin-dependent protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D J5M86_04305 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D J5M86_07305 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D J5M86_07150 tetratricopeptide repeat protein K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D J5M86_07155 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D J5M86_01765 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D J5M86_02340 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC D J5M86_09690 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D J5M86_09695 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D J5M86_09700 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D J5M86_07985 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D J5M86_13505 ferredoxin K05337 fer; ferredoxin D J5M86_07090 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D J5M86_10270 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D J5M86_05390 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase D J5M86_09400 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D J5M86_09175 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D J5M86_09975 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D J5M86_12330 transglycosylase family protein K21687 rpfA; resuscitation-promoting factor RpfA D J5M86_03110 resuscitation-promoting factor K21687 rpfA; resuscitation-promoting factor RpfA D J5M86_14375 transglycosylase family protein K21687 rpfA; resuscitation-promoting factor RpfA C 99987 Cofactor metabolism C 99988 Secondary metabolism D J5M86_01350 protein kinase/lanthionine synthetase C family protein K24914 ramC; probable SapB synthase C 99999 Others D J5M86_00795 hypothetical protein K15977 K15977; putative oxidoreductase D J5M86_07500 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D J5M86_01170 cold-shock protein K03704 cspA; cold shock protein D J5M86_02505 cold-shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D J5M86_04765 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D J5M86_09900 trigger factor K03545 tig; trigger factor D J5M86_10775 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D J5M86_05130 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D J5M86_07900 OsmC family protein K07397 yhfA; putative redox protein D J5M86_02435 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D J5M86_13110 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D J5M86_07795 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D J5M86_02200 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D J5M86_11400 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D J5M86_05125 YraN family protein K07460 yraN; putative endonuclease D J5M86_07330 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease D J5M86_05135 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D J5M86_06465 replication-associated recombination protein A K07478 ycaJ; putative ATPase D J5M86_13260 IS30 family transposase K07482 K07482; transposase, IS30 family D J5M86_13630 helix-turn-helix domain-containing protein K07483 K07483; transposase D J5M86_00555 transposase K07483 K07483; transposase D J5M86_07650 transposase K07483 K07483; transposase D J5M86_13635 ISL3 family transposase K07485 K07485; transposase D J5M86_03155 ISL3 family transposase K07485 K07485; transposase D J5M86_07640 IS110 family transposase K07486 K07486; transposase D J5M86_13640 transposase K07497 K07497; putative transposase D J5M86_00545 IS3 family transposase K07497 K07497; putative transposase D J5M86_00560 IS3 family transposase K07497 K07497; putative transposase D J5M86_14230 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D J5M86_07645 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D J5M86_14650 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D J5M86_01645 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J5M86_09340 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D J5M86_07395 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D J5M86_00665 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D J5M86_15120 RNA-binding protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D J5M86_02555 TerD family protein K05792 terA; tellurite resistance protein TerA D J5M86_14840 TerD family protein K05795 terD; tellurium resistance protein TerD D J5M86_14850 TerD family protein K05795 terD; tellurium resistance protein TerD D J5M86_14830 TerD family protein K05791 terZ; tellurium resistance protein TerZ D J5M86_11250 typA; translational GTPase TypA K06207 typA; GTP-binding protein D J5M86_05755 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D J5M86_03420 PhoH family protein K07175 phoH2; PhoH-like ATPase D J5M86_12120 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins C 99994 Others D J5M86_12435 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D J5M86_00965 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D J5M86_01450 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D J5M86_12650 PHP domain-containing protein K04477 ycdX; putative hydrolase D J5M86_01955 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D J5M86_09945 globin K06886 glbN; hemoglobin D J5M86_12990 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D J5M86_14385 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D J5M86_01620 patatin-like phospholipase family protein K07001 K07001; NTE family protein D J5M86_06205 patatin-like phospholipase family protein K07001 K07001; NTE family protein D J5M86_05405 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D J5M86_14825 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D J5M86_07065 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D J5M86_07070 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D J5M86_04060 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D J5M86_08465 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D J5M86_10065 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D J5M86_07480 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D J5M86_14060 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D J5M86_14995 hypothetical protein K07146 K07146; UPF0176 protein D J5M86_12855 LemA family protein K03744 lemA; LemA protein D J5M86_12835 VTT domain-containing protein K03975 dedA; membrane-associated protein D J5M86_09705 DedA family protein K03975 dedA; membrane-associated protein D J5M86_00865 phage holin family protein K08972 K08972; putative membrane protein D J5M86_03070 PH domain-containing protein K08981 K08981; putative membrane protein D J5M86_07675 SHOCT domain-containing protein K08982 K08982; putative membrane protein D J5M86_01280 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D J5M86_06435 preprotein translocase K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D J5M86_04500 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D J5M86_08485 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D J5M86_05025 RNA-binding protein K06960 K06960; uncharacterized protein D J5M86_00745 N-acetyltransferase K06975 K06975; uncharacterized protein D J5M86_01125 N-acetyltransferase K06975 K06975; uncharacterized protein D J5M86_05380 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein D J5M86_13890 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D J5M86_12100 VOC family protein K06996 K06996; uncharacterized protein D J5M86_14440 VOC family protein K06996 K06996; uncharacterized protein D J5M86_08500 lamin tail domain-containing protein K07004 K07004; uncharacterized protein D J5M86_02915 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D J5M86_07565 PPOX class F420-dependent oxidoreductase K07006 K07006; uncharacterized protein D J5M86_10720 hypothetical protein K07020 K07020; uncharacterized protein D J5M86_00700 glyoxalase K07032 K07032; uncharacterized protein D J5M86_13990 amidohydrolase K07045 K07045; uncharacterized protein D J5M86_07100 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D J5M86_00815 PIN domain-containing protein K07064 K07064; uncharacterized protein D J5M86_05310 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D J5M86_14690 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D J5M86_13740 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D J5M86_08815 helix-turn-helix domain-containing protein K07075 K07075; uncharacterized protein D J5M86_13380 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein D J5M86_11960 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5M86_00765 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5M86_01275 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5M86_04115 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5M86_05410 TSUP family transporter K07090 K07090; uncharacterized protein D J5M86_07190 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5M86_05920 PhoX family phosphatase K07093 K07093; uncharacterized protein D J5M86_01830 metallophosphoesterase K07098 K07098; uncharacterized protein D J5M86_03330 phosphoribosyltransferase K07101 K07101; uncharacterized protein D J5M86_12875 SDR family oxidoreductase K07124 K07124; uncharacterized protein D J5M86_11505 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D J5M86_13790 hypothetical protein K07149 K07149; uncharacterized protein D J5M86_06820 DUF554 domain-containing protein K07150 K07150; uncharacterized protein D J5M86_04030 VWA domain-containing protein K07161 K07161; uncharacterized protein D J5M86_06055 hypothetical protein K07164 K07164; uncharacterized protein D J5M86_15130 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D J5M86_07945 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D J5M86_03235 DUF501 domain-containing protein K09009 K09009; uncharacterized protein D J5M86_01835 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D J5M86_14865 hypothetical protein K09117 K09117; uncharacterized protein D J5M86_10935 UPF0182 family protein K09118 K09118; uncharacterized protein D J5M86_03065 PH domain-containing protein K09167 K09167; uncharacterized protein D J5M86_04505 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D J5M86_04365 hypothetical protein K09791 K09791; uncharacterized protein D J5M86_08795 DUF456 domain-containing protein K09793 K09793; uncharacterized protein D J5M86_14835 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D J5M86_04660 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D J5M86_06075 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D J5M86_04550 YcaQ family DNA glycosylase K09927 K09927; uncharacterized protein D J5M86_13480 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D J5M86_03610 DUF779 domain-containing protein K09959 K09959; uncharacterized protein D J5M86_05375 YgaC family protein K07586 ygaC; uncharacterized protein D J5M86_05455 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024