+D GENES KO
#
KEGG Orthology (KO) - Yersinia mollaretii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ymo00010]
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HRD69_03540 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_07915 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HRD69_04765 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HRD69_00890 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HRD69_04860 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HRD69_14930 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HRD69_00895 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HRD69_11715 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_08720 gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_04930 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HRD69_16285 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_16555 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_16350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HRD69_09215 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HRD69_09220 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_15990 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HRD69_02410 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_11725 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HRD69_12175 agp; bifunctional glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D HRD69_05245 yihX; glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_14915 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D HRD69_06535 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HRD69_06675 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_20420 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_17045 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_18565 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_18835 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_19160 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HRD69_17300 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HRD69_15565 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D HRD69_18840 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:ymo00020]
D HRD69_11565 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HRD69_15285 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HRD69_09240 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HRD69_17135 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HRD69_11590 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HRD69_11595 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_11605 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HRD69_11600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HRD69_11580 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_11585 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_11570 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HRD69_11575 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HRD69_07680 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_07675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_07670 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D HRD69_07665 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D HRD69_09905 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HRD69_15590 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HRD69_07935 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HRD69_06535 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HRD69_09215 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HRD69_09220 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HRD69_15990 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ymo00030]
D HRD69_03540 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HRD69_16545 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HRD69_12325 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D HRD69_12940 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HRD69_06615 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HRD69_00905 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HRD69_09930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HRD69_09935 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HRD69_08765 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HRD69_11015 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HRD69_00865 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HRD69_09580 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HRD69_08620 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HRD69_18255 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HRD69_05350 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HRD69_08630 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HRD69_10765 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_08160 phnN; ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D HRD69_16770 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HRD69_11960 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D HRD69_16540 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HRD69_19685 GMC family oxidoreductase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D HRD69_05725 ghrB; glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D HRD69_06355 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D HRD69_11930 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D HRD69_06155 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D HRD69_00890 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HRD69_07915 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HRD69_04765 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ymo00040]
D HRD69_05020 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D HRD69_14695 pectate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D HRD69_14645 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D HRD69_14705 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D HRD69_14700 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D HRD69_02345 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D HRD69_02340 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D HRD69_02335 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D HRD69_18400 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D HRD69_18405 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D HRD69_15030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HRD69_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_12935 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_15335 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HRD69_06615 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HRD69_15510 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D HRD69_15515 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D HRD69_05930 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D HRD69_05935 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D HRD69_03330 FGGY-family carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ymo00051]
D HRD69_08530 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HRD69_10405 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HRD69_15585 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HRD69_10930 cpsG; phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HRD69_10920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HRD69_10910 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10940 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10915 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_07915 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HRD69_04765 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HRD69_05790 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D HRD69_19640 srlD; sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D HRD69_09875 zinc-binding dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D HRD69_18360 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HRD69_05935 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D HRD69_00890 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HRD69_04860 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HRD69_09580 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HRD69_18355 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HRD69_14380 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HRD69_14375 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D HRD69_14370 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D HRD69_05785 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HRD69_11820 sugar phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D HRD69_14710 hxpB; hexitol phosphatase HxpB K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D HRD69_19635 srlB; PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HRD69_19630 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HRD69_19625 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D HRD69_09895 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D HRD69_09890 PTS sugar transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D HRD69_09885 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component
D HRD69_09880 PTS system mannose/fructose/sorbose family transporter subunit IID K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:ymo00052]
D HRD69_11725 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HRD69_11730 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HRD69_11735 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HRD69_10980 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_11740 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_12935 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HRD69_13515 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_08515 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HRD69_00720 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HRD69_10445 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:ymo00053]
D HRD69_15030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HRD69_11790 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HRD69_11785 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HRD69_11780 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HRD69_15335 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HRD69_07555 garL; 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D HRD69_07575 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:ymo00500]
D HRD69_20115 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_08520 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_08515 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HRD69_00720 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HRD69_10445 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HRD69_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_12935 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_07470 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D HRD69_20415 chbA; PTS N,N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_17040 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_20430 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_17055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_20425 chbC; PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_17050 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_06675 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_20420 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_17045 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_18565 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_18835 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HRD69_10855 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HRD69_06415 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HRD69_06420 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D HRD69_06405 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HRD69_06425 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HRD69_06465 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HRD69_06410 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D HRD69_05720 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HRD69_13930 amyA; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HRD69_06470 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HRD69_19160 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HRD69_15565 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D HRD69_03045 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HRD69_03050 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HRD69_03540 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HRD69_08530 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HRD69_10405 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ymo00520]
D HRD69_17230 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HRD69_11430 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HRD69_19160 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HRD69_11415 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HRD69_17190 nagK; N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D HRD69_11405 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HRD69_11410 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HRD69_08530 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HRD69_10405 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HRD69_05470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HRD69_08015 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HRD69_05465 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HRD69_20120 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D HRD69_16160 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D HRD69_11000 NTP transferase domain-containing protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D HRD69_02890 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HRD69_03785 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HRD69_19270 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D HRD69_19275 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HRD69_19280 dihydrodipicolinate synthase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HRD69_04330 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HRD69_04325 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D HRD69_16410 arnA; bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D HRD69_16420 arnB; UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D HRD69_16415 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D HRD69_16405 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D HRD69_17300 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HRD69_15565 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_12935 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_15030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HRD69_11730 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HRD69_11735 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HRD69_10980 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_11740 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_14380 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HRD69_14375 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D HRD69_14370 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D HRD69_03540 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HRD69_15585 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HRD69_10930 cpsG; phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HRD69_10920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HRD69_10910 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10940 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10915 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HRD69_10855 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HRD69_10860 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D HRD69_10865 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D HRD69_10850 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D HRD69_10870 NAD-dependent epimerase/dehydratase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D HRD69_10875 GDP-mannose 4,6-dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D HRD69_06415 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ymo00620]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_15990 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HRD69_09215 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HRD69_09220 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_18020 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_02410 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HRD69_11805 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HRD69_11800 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HRD69_16285 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_16555 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_00325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HRD69_03265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HRD69_03270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HRD69_12250 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HRD69_17740 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HRD69_18135 poxB; ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D HRD69_15970 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D HRD69_12450 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D HRD69_16215 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HRD69_00190 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HRD69_17900 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HRD69_16705 ghrA; glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HRD69_05725 ghrB; glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D HRD69_12860 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HRD69_19320 maeB; NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HRD69_07935 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HRD69_09905 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HRD69_15590 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HRD69_07680 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_07675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_07670 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D HRD69_07665 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D HRD69_04750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HRD69_06535 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HRD69_16350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HRD69_03570 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HRD69_02980 isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HRD69_09010 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ymo00630]
D HRD69_03565 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_03570 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HRD69_07935 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HRD69_11565 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HRD69_15285 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HRD69_09240 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HRD69_14740 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HRD69_12015 catalase K03781 katE; catalase [EC:1.11.1.6]
D HRD69_16705 ghrA; glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HRD69_05725 ghrB; glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D HRD69_06620 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_20020 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HRD69_00810 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HRD69_00820 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_00815 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HRD69_07560 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D HRD69_07565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HRD69_16540 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HRD69_05845 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HRD69_05850 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HRD69_05855 fdoI; formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D HRD69_15015 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HRD69_16880 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ymo00640]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_11805 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HRD69_13070 acetate/propionate family kinase K19697 pduW; propionate kinase [EC:2.7.2.15]
D HRD69_11800 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HRD69_13120 phosphate propanoyltransferase K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_18020 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HRD69_03245 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_00325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HRD69_03265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HRD69_03270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HRD69_12250 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HRD69_14730 scpB; methylmalonyl-CoA decarboxylase K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-]
D HRD69_14740 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HRD69_14725 succinate CoA transferase K22214 scpC; propionyl-CoA:succinyl-CoA transferase [EC:2.8.3.27]
D HRD69_11600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HRD69_11605 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HRD69_06300 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HRD69_09240 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HRD69_17765 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D HRD69_01825 yqhD; alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D HRD69_08455 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D HRD69_13155 pduC; propanediol dehydratase large subunit PduC K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D HRD69_13150 propanediol/glycerol family dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D HRD69_13145 pduE; propanediol dehydratase small subunit PduE K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D HRD69_13095 iron-containing alcohol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D HRD69_13100 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:ymo00650]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_05575 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HRD69_11580 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_11585 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_11570 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HRD69_11575 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HRD69_07680 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_07675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_07670 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D HRD69_07665 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D HRD69_15790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D HRD69_03135 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HRD69_18020 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HRD69_15990 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HRD69_04550 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09030 ilvI; acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HRD69_04545 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ymo00660]
D HRD69_04550 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09030 ilvI; acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HRD69_04545 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HRD69_11600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HRD69_11605 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HRD69_09000 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HRD69_08995 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HRD69_09005 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ymo00562]
D HRD69_03690 phosphatidylinositol-specific phospholipase C K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D HRD69_03695 phosphatidylinositol-specific phospholipase C K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D HRD69_15995 phosphatidylinositol-specific phospholipase C K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D HRD69_19995 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HRD69_13485 AppA family phytase/histidine-type acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D HRD69_06325 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HRD69_06290 TIM barrel protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D HRD69_06330 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D HRD69_06320 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D HRD69_06305 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D HRD69_06315 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D HRD69_06300 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HRD69_04860 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ymo00190]
D HRD69_11845 nuoA; NADH-quinone oxidoreductase subunit NuoA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D HRD69_11850 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D HRD69_11855 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D HRD69_11860 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D HRD69_11865 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HRD69_11870 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D HRD69_11875 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D HRD69_11880 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D HRD69_11885 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D HRD69_11890 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D HRD69_11895 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D HRD69_11900 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D HRD69_11905 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D HRD69_17220 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HRD69_11580 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_11585 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_11570 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HRD69_11575 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HRD69_07680 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_07675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_07670 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D HRD69_07665 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D HRD69_10575 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HRD69_10580 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D HRD69_10585 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D HRD69_10590 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D HRD69_10595 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D HRD69_11615 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HRD69_16920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HRD69_11620 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HRD69_16925 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HRD69_11625 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HRD69_05445 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HRD69_05455 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HRD69_05450 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HRD69_05440 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HRD69_05460 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HRD69_05425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HRD69_05435 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HRD69_05430 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HRD69_07905 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HRD69_19515 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ymo00680]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_12725 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D HRD69_05845 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HRD69_05850 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HRD69_05855 fdoI; formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D HRD69_07595 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HRD69_12780 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HRD69_20020 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HRD69_04750 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HRD69_07935 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HRD69_00890 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HRD69_07915 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HRD69_04765 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_18375 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D HRD69_18380 torA; trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D HRD69_07515 amine dehydrogenase K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1]
D HRD69_07500 amine dehydrogenase K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1]
D HRD69_11805 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HRD69_11800 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_16350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HRD69_11715 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_08720 gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_04930 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HRD69_00860 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HRD69_18000 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HRD69_08650 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ymo00910]
D HRD69_19340 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D HRD69_19335 napB; nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D HRD69_06645 nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D HRD69_06640 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D HRD69_17535 nrfA; ammonia-forming nitrite reductase cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HRD69_18125 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HRD69_06215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_02835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HRD69_02840 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HRD69_00685 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D HRD69_09325 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D HRD69_08325 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ymo00920]
D HRD69_19245 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_04865 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_19240 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D HRD69_19235 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D HRD69_19230 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HRD69_02440 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_06740 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_02450 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_06750 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_02445 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_06745 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_06755 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D HRD69_09565 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HRD69_09560 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HRD69_09570 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D HRD69_07865 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HRD69_09535 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D HRD69_09525 cysJ; NADPH-dependent assimilatory sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D HRD69_09530 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D HRD69_12525 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HRD69_06450 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D HRD69_04905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HRD69_10675 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HRD69_19145 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HRD69_03575 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HRD69_04830 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HRD69_18945 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HRD69_18950 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HRD69_18955 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ymo00061]
D HRD69_00325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HRD69_03265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HRD69_03270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HRD69_12250 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HRD69_07380 acyl carrier protein K02078 acpP; acyl carrier protein
D HRD69_09755 acyl carrier protein K02078 acpP; acyl carrier protein
D HRD69_17335 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HRD69_17345 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HRD69_17350 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HRD69_12160 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HRD69_09745 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17330 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17820 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_09760 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_15820 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17340 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17810 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HRD69_00350 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HRD69_05575 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HRD69_09025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_16500 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ymo00071]
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_10260 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D HRD69_09025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_16500 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_00615 aas; bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ymo00561]
D HRD69_07565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HRD69_02410 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HRD69_08460 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HRD69_09600 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HRD69_08465 dhaL; dihydroxyacetone kinase ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HRD69_09605 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HRD69_08470 dhaM; dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HRD69_08455 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D HRD69_09940 FGGY-family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HRD69_04770 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HRD69_03490 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HRD69_17355 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HRD69_01965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HRD69_01845 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HRD69_03485 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HRD69_14530 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:ymo00564]
D HRD69_04910 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HRD69_04120 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HRD69_06430 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HRD69_04115 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D HRD69_04110 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D HRD69_03490 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HRD69_01965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HRD69_01845 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HRD69_03485 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HRD69_04160 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HRD69_04140 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HRD69_03945 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HRD69_04130 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HRD69_00615 aas; bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HRD69_01535 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D HRD69_01530 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D HRD69_06175 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D HRD69_00375 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HRD69_10155 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HRD69_07695 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HRD69_13965 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HRD69_10530 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D HRD69_15295 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D HRD69_20110 yfhb; phosphatidylglycerophosphatase C K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D HRD69_15095 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ymo00565]
D HRD69_04160 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ymo00600]
D HRD69_13515 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HRD69_11430 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D HRD69_04160 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D HRD69_04160 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ymo00592]
D HRD69_04160 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ymo01040]
D HRD69_11095 tesA; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HRD69_10705 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HRD69_15130 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ymo00230]
D HRD69_01890 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HRD69_06560 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D HRD69_08630 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HRD69_10765 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_16770 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HRD69_12270 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HRD69_03620 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HRD69_19490 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HRD69_14410 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D HRD69_20090 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HRD69_19485 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HRD69_11110 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HRD69_11115 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HRD69_19430 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HRD69_17160 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HRD69_03615 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HRD69_10815 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HRD69_11045 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HRD69_09635 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HRD69_11395 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HRD69_06550 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D HRD69_11030 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D HRD69_13295 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HRD69_08635 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HRD69_10395 ppnP; pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D HRD69_10105 pgeF; polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HRD69_09320 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HRD69_19850 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HRD69_19910 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HRD69_08715 yjjX; inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D HRD69_01010 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HRD69_10335 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HRD69_19845 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HRD69_09165 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D HRD69_05150 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HRD69_00105 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_12060 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_00110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HRD69_12055 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HRD69_08220 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HRD69_09470 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D HRD69_11830 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HRD69_05160 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HRD69_04360 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HRD69_19520 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HRD69_09485 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D HRD69_04235 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D HRD69_12455 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D HRD69_11525 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D HRD69_07780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HRD69_15550 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HRD69_15755 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D HRD69_00460 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HRD69_07860 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HRD69_11610 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HRD69_10840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HRD69_09490 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HRD69_01880 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D HRD69_08890 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D HRD69_09570 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D HRD69_09565 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HRD69_09560 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HRD69_00015 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HRD69_00020 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HRD69_00025 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:ymo00240]
D HRD69_08865 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HRD69_08860 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HRD69_02990 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HRD69_02995 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HRD69_03070 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HRD69_17390 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HRD69_17865 pyrD; quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HRD69_06140 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HRD69_15320 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HRD69_00395 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HRD69_19910 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HRD69_09490 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HRD69_03220 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HRD69_02310 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D HRD69_09495 pyrG; CTP synthase (glutamine hydrolyzing) K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HRD69_17990 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HRD69_14980 pyrimidine (deoxy)nucleoside triphosphate diphosphatase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D HRD69_12905 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HRD69_11045 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HRD69_09635 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HRD69_11395 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HRD69_15805 yjjG; pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D HRD69_03915 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D HRD69_10395 ppnP; pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D HRD69_19480 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HRD69_07860 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HRD69_11610 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HRD69_00460 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HRD69_12865 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HRD69_06650 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D HRD69_08220 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HRD69_12910 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HRD69_00105 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_12060 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_00110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HRD69_12055 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HRD69_11830 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HRD69_17315 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HRD69_05010 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HRD69_08625 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D HRD69_15040 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HRD69_00575 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HRD69_01390 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HRD69_09850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HRD69_15650 ydfG; bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ymo00250]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_20200 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HRD69_14950 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HRD69_18005 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HRD69_05395 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HRD69_11390 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HRD69_10210 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D HRD69_11835 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HRD69_07615 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D HRD69_13305 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HRD69_04730 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HRD69_07780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HRD69_17160 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HRD69_02990 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HRD69_02995 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HRD69_15790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D HRD69_03135 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HRD69_02835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HRD69_02840 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HRD69_06215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HRD69_13860 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_08865 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HRD69_08860 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HRD69_01035 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_15800 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_17075 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_05470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HRD69_12270 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ymo00260]
D HRD69_03545 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HRD69_08745 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HRD69_04835 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HRD69_06365 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HRD69_08750 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HRD69_08755 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HRD69_18145 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HRD69_20020 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HRD69_16705 ghrA; glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HRD69_05725 ghrB; glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D HRD69_07565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HRD69_11715 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_08720 gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_04930 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HRD69_00860 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HRD69_18000 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HRD69_08650 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HRD69_15650 ydfG; bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D HRD69_04950 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HRD69_04945 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D HRD69_00810 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HRD69_00820 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_00815 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HRD69_02430 NarL family transcriptional regulator K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D HRD69_10155 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HRD69_18280 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D HRD69_18285 PLP-dependent transferase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HRD69_14390 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HRD69_18270 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HRD69_04530 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HRD69_05635 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HRD69_12170 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HRD69_15160 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HRD69_15165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ymo00270]
D HRD69_04905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HRD69_10675 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HRD69_19145 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HRD69_18285 PLP-dependent transferase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HRD69_01810 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HRD69_15560 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HRD69_18280 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D HRD69_03550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HRD69_03925 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HRD69_00925 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HRD69_09295 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HRD69_09300 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HRD69_02710 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D HRD69_17490 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D HRD69_09465 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HRD69_10240 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D HRD69_10105 pgeF; polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HRD69_10235 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D HRD69_10220 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D HRD69_10225 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D HRD69_10230 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D HRD69_14620 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HRD69_10020 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HRD69_03545 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HRD69_08745 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HRD69_04835 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HRD69_06365 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HRD69_03575 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HRD69_04830 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HRD69_14220 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HRD69_04540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HRD69_10015 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HRD69_00960 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_12525 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HRD69_12170 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HRD69_13830 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D HRD69_07935 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HRD69_14390 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HRD69_18270 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HRD69_19225 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D HRD69_00860 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HRD69_18000 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ymo00280]
D HRD69_04540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_14740 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HRD69_06300 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ymo00290]
D HRD69_04530 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HRD69_05635 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HRD69_09000 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HRD69_08995 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HRD69_09005 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HRD69_04550 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09030 ilvI; acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HRD69_04545 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HRD69_04480 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HRD69_04535 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HRD69_04540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HRD69_05715 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D HRD69_11835 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HRD69_02980 isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HRD69_09010 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ymo00300]
D HRD69_03545 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HRD69_08745 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HRD69_04835 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HRD69_06365 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HRD69_19440 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HRD69_08855 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HRD69_00420 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HRD69_06695 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HRD69_19395 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HRD69_04220 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HRD69_00630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HRD69_09070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HRD69_09075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ymo00310]
D HRD69_11595 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_12170 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HRD69_03135 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HRD69_17960 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D HRD69_16335 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:ymo00220]
D HRD69_08255 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HRD69_13305 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HRD69_04730 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HRD69_00015 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HRD69_00020 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HRD69_00025 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HRD69_08420 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HRD69_01035 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_15800 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_17075 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_06215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_11835 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HRD69_00530 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D HRD69_04735 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HRD69_04740 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HRD69_06695 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HRD69_04745 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ymo00330]
D HRD69_02430 NarL family transcriptional regulator K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D HRD69_06650 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D HRD69_00920 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HRD69_00980 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HRD69_00975 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D HRD69_01065 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HRD69_08135 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HRD69_09300 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HRD69_09295 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HRD69_19495 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D HRD69_16905 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D HRD69_16895 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D HRD69_16910 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D HRD69_16900 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D HRD69_16890 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D HRD69_00995 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HRD69_13860 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HRD69_10350 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HRD69_10355 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HRD69_14430 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ymo00340]
D HRD69_12980 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HRD69_12945 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D HRD69_12955 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HRD69_12960 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HRD69_12950 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HRD69_12965 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_12975 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HRD69_05110 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D HRD69_05115 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D HRD69_16875 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D HRD69_16865 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D HRD69_16880 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:ymo00350]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HRD69_03135 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ymo00360]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D HRD69_06335 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
C 00380 Tryptophan metabolism [PATH:ymo00380]
D HRD69_11595 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_19045 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D HRD69_12015 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ymo00400]
D HRD69_10075 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_11710 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_16360 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_06600 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HRD69_03260 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HRD69_07045 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HRD69_06595 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HRD69_10390 aroL; shikimate kinase AroL K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HRD69_17995 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HRD69_12130 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HRD69_15180 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HRD69_15170 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D HRD69_15160 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HRD69_15165 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HRD69_10080 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HRD69_18165 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D HRD69_10085 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HRD69_09775 transporter substrate-binding domain-containing protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ymo00410]
D HRD69_09345 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HRD69_15790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D HRD69_09365 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HRD69_09850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_06300 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ymo00430]
D HRD69_15790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D HRD69_10455 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HRD69_06755 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D HRD69_11800 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HRD69_11805 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ymo00440]
D HRD69_08185 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D HRD69_08195 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D HRD69_08190 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D HRD69_08170 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D HRD69_08165 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D HRD69_08180 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D HRD69_08155 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ymo00450]
D HRD69_04830 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HRD69_01810 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HRD69_15560 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HRD69_03550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HRD69_03925 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HRD69_18285 PLP-dependent transferase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HRD69_16305 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HRD69_18060 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HRD69_09565 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HRD69_09560 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HRD69_14965 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HRD69_03065 DgaE family pyridoxal phosphate-dependent ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HRD69_05865 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HRD69_12895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ymo00460]
D HRD69_10455 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HRD69_14950 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HRD69_18005 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HRD69_05395 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HRD69_20020 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ymo00470]
D HRD69_03440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_14855 dadX; catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_09105 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HRD69_12170 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HRD69_01035 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_15800 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_17075 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_04630 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HRD69_09085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HRD69_16025 ycjG; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D HRD69_13830 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D HRD69_04220 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HRD69_00630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ymo00480]
D HRD69_10455 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HRD69_11545 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HRD69_11535 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D HRD69_11540 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D HRD69_10015 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HRD69_00960 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HRD69_08280 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HRD69_19945 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HRD69_17870 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HRD69_10330 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HRD69_20435 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_03415 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_14545 yfcF; glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_16135 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_18320 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_06190 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HRD69_17135 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HRD69_12940 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HRD69_16545 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HRD69_16430 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HRD69_04665 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D HRD69_01065 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HRD69_08135 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HRD69_09300 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ymo00511]
D HRD69_13515 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HRD69_11430 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:ymo00540]
D HRD69_00345 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HRD69_16455 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HRD69_09125 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HRD69_00355 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HRD69_11120 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HRD69_00340 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HRD69_17965 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HRD69_02930 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HRD69_16730 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HRD69_02935 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HRD69_17945 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HRD69_04970 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HRD69_17435 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HRD69_16560 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D HRD69_13465 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D HRD69_18420 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D HRD69_16200 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HRD69_05090 eptB; kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D HRD69_14315 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D HRD69_16400 arnT; lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D HRD69_03355 lpxP; kdo(2)-lipid IV(A) palmitoleoyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D HRD69_10265 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HRD69_11005 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HRD69_01930 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HRD69_00240 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HRD69_11010 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HRD69_04955 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HRD69_10995 galactokinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D HRD69_04965 rfaC; lipopolysaccharide heptosyltransferase RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D HRD69_04960 rfaF; ADP-heptose--LPS heptosyltransferase RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HRD69_08405 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ymo00542]
D HRD69_04340 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ymo00541]
D HRD69_12930 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_12935 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HRD69_10980 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_11740 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HRD69_15030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HRD69_04315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HRD69_04320 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HRD69_04305 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D HRD69_04310 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D HRD69_10855 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HRD69_10860 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D HRD69_10865 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D HRD69_10850 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D HRD69_10870 NAD-dependent epimerase/dehydratase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D HRD69_10875 GDP-mannose 4,6-dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D HRD69_15585 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HRD69_10930 cpsG; phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HRD69_10920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HRD69_10910 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10940 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HRD69_10915 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HRD69_05465 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HRD69_04330 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HRD69_04325 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ymo00550]
D HRD69_02890 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HRD69_03785 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HRD69_09100 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HRD69_09085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HRD69_09070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HRD69_09105 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HRD69_09075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HRD69_00380 ispU; (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HRD69_01955 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_18250 ybjG; undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_09080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HRD69_09095 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HRD69_02815 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HRD69_06565 mrcA; peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HRD69_09410 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HRD69_19920 pbpC; peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HRD69_11265 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HRD69_09065 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_14335 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_11250 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_18275 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_07985 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HRD69_06025 transglycosylase domain-containing protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:ymo00552]
D HRD69_01955 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_18250 ybjG; undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_04340 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ymo00543]
D HRD69_04340 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HRD69_04285 rffM; lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D HRD69_04295 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D HRD69_16970 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D HRD69_16965 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D HRD69_04905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ymo00730]
D HRD69_03660 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HRD69_19670 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HRD69_03670 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D HRD69_19980 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HRD69_10550 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HRD69_03685 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D HRD69_10535 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HRD69_03680 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HRD69_03665 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HRD69_10525 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HRD69_07700 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HRD69_15815 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HRD69_17235 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D HRD69_10840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ymo00740]
D HRD69_15290 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HRD69_10510 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HRD69_17110 HAD family hydrolase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D HRD69_04205 yigB; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D HRD69_01915 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D HRD69_10515 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HRD69_16265 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HRD69_08830 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HRD69_13485 AppA family phytase/histidine-type acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D HRD69_03840 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D HRD69_01890 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HRD69_17145 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D HRD69_12275 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ymo00750]
D HRD69_16150 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D HRD69_16140 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HRD69_00900 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D HRD69_12230 pdxB; 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D HRD69_18000 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HRD69_08905 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D HRD69_20145 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D HRD69_08755 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ymo00760]
D HRD69_20200 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HRD69_11695 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HRD69_09185 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HRD69_17875 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HRD69_13295 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HRD69_08635 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HRD69_08660 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HRD69_11045 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HRD69_09635 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HRD69_11395 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HRD69_11280 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HRD69_09490 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HRD69_03650 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HRD69_20065 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HRD69_09960 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HRD69_14945 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D HRD69_17185 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HRD69_20230 nadK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HRD69_04655 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D HRD69_15860 pntA; Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HRD69_15855 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D HRD69_03135 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ymo00770]
D HRD69_04550 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09030 ilvI; acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HRD69_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HRD69_04545 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HRD69_04480 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HRD69_04535 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HRD69_09370 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D HRD69_10560 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HRD69_09365 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HRD69_03775 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HRD69_05005 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HRD69_09490 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HRD69_04980 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HRD69_09160 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HRD69_20140 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HRD69_10470 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D HRD69_04540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HRD69_09850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HRD69_09345 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ymo00780]
D HRD69_12345 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D HRD69_12160 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HRD69_09745 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17330 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17820 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_09760 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_15820 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17340 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_00350 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HRD69_06485 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D HRD69_12340 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HRD69_12330 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HRD69_12350 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HRD69_15620 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HRD69_12335 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D HRD69_03780 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HRD69_00620 molybdopterin-dependent oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:ymo00785]
D HRD69_11240 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HRD69_11235 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HRD69_16380 lipoate--protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09215 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HRD69_09220 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HRD69_11590 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HRD69_11595 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HRD69_00810 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HRD69_00820 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HRD69_00815 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ymo00790]
D HRD69_12745 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HRD69_15815 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HRD69_16605 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D HRD69_01960 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HRD69_09375 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HRD69_08010 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HRD69_08885 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HRD69_12255 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HRD69_15290 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HRD69_06690 aminodeoxychorismate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D HRD69_14400 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HRD69_17325 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HRD69_09520 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HRD69_09515 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HRD69_10660 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HRD69_00455 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HRD69_12375 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HRD69_12380 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HRD69_12390 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HRD69_08770 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HRD69_12695 moeA; molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HRD69_05305 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ymo00670]
D HRD69_08885 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HRD69_15490 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HRD69_11140 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HRD69_20020 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HRD69_19490 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HRD69_03615 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HRD69_07015 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HRD69_00820 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HRD69_03550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HRD69_00575 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HRD69_01390 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HRD69_15015 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HRD69_04845 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HRD69_00855 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ymo00860]
D HRD69_19100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HRD69_16755 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HRD69_09435 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HRD69_03855 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HRD69_04240 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HRD69_04245 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D HRD69_03645 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HRD69_19310 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D HRD69_05270 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D HRD69_03810 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D HRD69_10845 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HRD69_04250 hemX; uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HRD69_06630 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D HRD69_09555 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D HRD69_13065 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HRD69_10575 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HRD69_13230 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HRD69_13235 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HRD69_13220 precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D HRD69_13210 cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HRD69_13215 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D HRD69_13225 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D HRD69_13195 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D HRD69_13205 decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D HRD69_13200 cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D HRD69_13190 cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HRD69_13180 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HRD69_15250 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HRD69_13260 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HRD69_13185 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HRD69_13265 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HRD69_13270 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HRD69_13280 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HRD69_13275 adenosylcobalamin/alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D HRD69_13055 GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D HRD69_13060 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D HRD69_06845 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ymo00130]
D HRD69_03500 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D HRD69_03495 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HRD69_03845 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D HRD69_12275 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HRD69_00825 ubiI; FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D HRD69_12065 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D HRD69_00830 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D HRD69_03890 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HRD69_11355 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D HRD69_11980 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HRD69_11985 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D HRD69_11990 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D HRD69_12000 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D HRD69_12005 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D HRD69_11995 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D HRD69_16330 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D HRD69_04790 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HRD69_13885 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HRD69_14225 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ymo00900]
D HRD69_10535 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HRD69_00385 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HRD69_09620 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HRD69_16765 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HRD69_09625 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HRD69_19890 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HRD69_08850 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HRD69_12275 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HRD69_10540 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HRD69_07950 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HRD69_00380 ispU; (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ymo00907]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HRD69_00905 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HRD69_09930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HRD69_09935 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ymo00523]
D HRD69_04315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HRD69_04320 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ymo01053]
D HRD69_11980 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HRD69_13460 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D HRD69_04320 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ymo00332]
D HRD69_10350 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HRD69_10355 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ymo00261]
D HRD69_09565 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HRD69_09560 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HRD69_03545 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HRD69_08745 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HRD69_04835 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HRD69_06365 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HRD69_19440 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HRD69_08855 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HRD69_03770 GNAT family N-acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ymo00521]
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HRD69_11465 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HRD69_19995 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HRD69_06325 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HRD69_04315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HRD69_04320 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HRD69_19030 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ymo00525]
D HRD69_04315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HRD69_04320 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ymo00401]
D HRD69_10080 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HRD69_15180 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HRD69_17345 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HRD69_09760 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_15820 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17340 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HRD69_07380 acyl carrier protein K02078 acpP; acyl carrier protein
D HRD69_09755 acyl carrier protein K02078 acpP; acyl carrier protein
D HRD69_17335 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ymo00999]
D HRD69_00925 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HRD69_07045 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ymo00997]
D HRD69_17565 lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D HRD69_17555 acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D HRD69_17550 IucA/IucC family siderophore biosynthesis protein K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D HRD69_17560 iucC; aerobactin synthase IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ymo00362]
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_06160 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D HRD69_16810 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:ymo00627]
D HRD69_17740 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HRD69_12275 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HRD69_02460 amidohydrolase K15063 ligW; 5-carboxyvanillate decarboxylase
C 00364 Fluorobenzoate degradation [PATH:ymo00364]
D HRD69_03920 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D HRD69_07445 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ymo00625]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ymo00361]
D HRD69_03920 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D HRD69_07445 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ymo00623]
D HRD69_03920 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D HRD69_07445 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D HRD69_06160 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ymo00633]
D HRD69_16210 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D HRD69_01605 hybC; hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HRD69_01620 hybO; hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D HRD69_03835 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HRD69_18710 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D HRD69_00015 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HRD69_00020 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HRD69_00025 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ymo00930]
D HRD69_03830 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HRD69_18705 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D HRD69_06160 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ymo00626]
D HRD69_12730 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HRD69_15045 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ymo03020]
D HRD69_03705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HRD69_03700 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HRD69_06980 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ymo03010]
D HRD69_17985 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HRD69_00405 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HRD69_06885 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HRD69_06975 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HRD69_06940 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HRD69_07820 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HRD69_06825 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HRD69_06925 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HRD69_02860 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HRD69_06850 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HRD69_06970 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HRD69_06820 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HRD69_06965 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HRD69_06920 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HRD69_08060 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HRD69_10040 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HRD69_06900 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HRD69_07830 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HRD69_06875 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HRD69_08815 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HRD69_01975 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HRD69_03720 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HRD69_06870 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HRD69_06855 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HRD69_06860 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HRD69_06915 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HRD69_06930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HRD69_03710 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HRD69_07835 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HRD69_03715 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HRD69_03725 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HRD69_02865 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HRD69_06905 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HRD69_06950 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HRD69_06890 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HRD69_06985 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HRD69_06935 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HRD69_10055 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HRD69_14820 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HRD69_07955 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HRD69_06880 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HRD69_06865 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HRD69_06910 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HRD69_18475 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HRD69_07960 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HRD69_04995 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HRD69_06895 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HRD69_06945 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HRD69_04820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HRD69_10760 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HRD69_17360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HRD69_04990 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HRD69_05600 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HRD69_14815 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HRD69_06960 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HRD69_10755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HRD69_05330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_00235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_03610 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_05320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_00225 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_03595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_00220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ymo00970]
D HRD69_03600 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_04615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_10125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_19105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_19110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_11145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_04275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_18790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_09990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_09995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_10000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_13335 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_13380 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_13470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_00170 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_04600 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_10140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_13975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HRD69_11370 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_11360 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_11375 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_00230 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_03800 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_05325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_07060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_00735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_03750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07715 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07720 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_13970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_04270 tRNA-His K14226 tRNA-His; tRNA His
D HRD69_03605 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_04620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_10120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_08025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_11380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_13980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_04265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_11670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_19075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_13910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_00510 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_00515 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_00520 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_01990 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HRD69_08030 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_11365 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_11385 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_01070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HRD69_07545 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HRD69_18495 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_04260 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_05070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_17730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_18685 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_16710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_16715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_03765 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_03745 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_03585 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_18690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_04595 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HRD69_03760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_15000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_15010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_16275 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_16280 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19085 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19090 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19095 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_05960 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HRD69_19100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HRD69_11420 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HRD69_09975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HRD69_16610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HRD69_17880 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HRD69_05765 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HRD69_05770 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HRD69_14805 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HRD69_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HRD69_03065 DgaE family pyridoxal phosphate-dependent ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HRD69_05865 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HRD69_11130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HRD69_12895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HRD69_07015 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HRD69_08270 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HRD69_11295 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HRD69_08835 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HRD69_00740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HRD69_16660 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HRD69_00270 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HRD69_19885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HRD69_14830 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HRD69_14835 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HRD69_16145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HRD69_06625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ymo03060]
D HRD69_06955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HRD69_03735 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HRD69_08020 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HRD69_10495 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HRD69_10500 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HRD69_10490 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HRD69_05585 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HRD69_09140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HRD69_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HRD69_09135 secM; secA regulator SecM K13301 secM; secretion monitor
D HRD69_10035 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HRD69_10720 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D HRD69_04060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HRD69_03875 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HRD69_03870 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HRD69_03865 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D HRD69_11230 tatA; Sec-independent protein translocase subunit TatA K03425 tatE; sec-independent protein translocase protein TatE
D HRD69_20165 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HRD69_08840 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ymo04122]
D HRD69_19980 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HRD69_12525 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HRD69_04095 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HRD69_06815 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HRD69_06810 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HRD69_06805 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HRD69_17735 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HRD69_17150 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HRD69_12390 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HRD69_12375 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HRD69_12385 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D HRD69_12690 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HRD69_12380 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HRD69_08770 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HRD69_10550 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HRD69_03675 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D HRD69_03670 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ymo03018]
D HRD69_00590 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HRD69_17380 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HRD69_04355 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HRD69_08065 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HRD69_12425 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HRD69_07790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HRD69_08080 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HRD69_04155 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HRD69_04345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_08790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HRD69_07630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HRD69_07755 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HRD69_19515 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ymo03030]
D HRD69_14435 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D HRD69_00175 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HRD69_00330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HRD69_10820 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HRD69_17310 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HRD69_11285 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HRD69_08275 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HRD69_05610 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HRD69_03445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HRD69_01980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_00180 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HRD69_00335 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ymo03410]
D HRD69_15445 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HRD69_20220 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HRD69_01050 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HRD69_04985 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HRD69_13780 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HRD69_05755 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HRD69_14985 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HRD69_18350 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_00750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ymo03420]
D HRD69_17210 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HRD69_03425 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HRD69_12360 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D HRD69_13960 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HRD69_20315 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_04200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ymo03430]
D HRD69_09655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HRD69_07745 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HRD69_00595 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D HRD69_20315 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_04200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_13015 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HRD69_19855 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HRD69_10545 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HRD69_00750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_00330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HRD69_05610 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HRD69_10820 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HRD69_11285 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HRD69_17310 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HRD69_00175 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HRD69_14435 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D HRD69_08275 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_06610 dam; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ymo03440]
D HRD69_00750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_05615 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HRD69_20150 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HRD69_10830 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HRD69_09965 recA; recombinase RecA K03553 recA; recombination protein RecA
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_16590 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HRD69_16585 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HRD69_16595 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HRD69_05170 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HRD69_00540 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HRD69_00550 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HRD69_00535 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HRD69_00330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HRD69_05610 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HRD69_10820 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HRD69_11285 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HRD69_17310 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HRD69_00175 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HRD69_14435 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D HRD69_08275 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HRD69_04815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HRD69_07825 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D HRD69_10805 primosomal replication protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ymo03250]
D HRD69_06680 ppiA; peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ymo02010]
D HRD69_19245 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_04865 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_19240 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D HRD69_19235 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D HRD69_19230 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HRD69_02440 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_06740 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_02450 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_06750 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_02445 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_06745 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_11765 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HRD69_11770 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HRD69_11775 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HRD69_11750 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D HRD69_13395 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_18925 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_19380 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_13390 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HRD69_19375 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HRD69_13385 fbpC; ferric ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_18935 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_19370 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_08960 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D HRD69_08955 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D HRD69_08950 thiQ; thiamine ABC transporter ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D HRD69_18220 potF; spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D HRD69_18205 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D HRD69_18210 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D HRD69_18215 potG; putrescine ABC transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D HRD69_00125 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HRD69_00115 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HRD69_12540 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D HRD69_12545 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D HRD69_12555 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D HRD69_12550 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HRD69_03520 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HRD69_03525 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D HRD69_03530 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D HRD69_03515 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HRD69_14675 carbohydrate ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D HRD69_14690 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein
D HRD69_14685 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein
D HRD69_14680 ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D HRD69_02905 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D HRD69_02910 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HRD69_18865 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HRD69_02915 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HRD69_18875 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HRD69_02900 mlaB; lipid asymmetry maintenance protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D HRD69_02920 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HRD69_18870 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HRD69_05355 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HRD69_05360 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HRD69_05365 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HRD69_05370 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HRD69_15520 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D HRD69_15530 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D HRD69_15525 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D HRD69_04590 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D HRD69_04575 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D HRD69_04580 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D HRD69_04585 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D HRD69_12760 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HRD69_12770 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D HRD69_12765 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D HRD69_05940 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D HRD69_05950 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D HRD69_05945 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D HRD69_09910 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HRD69_09925 ABC transporter permease K17203 eryF; erythritol transport system permease protein
D HRD69_09920 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HRD69_16855 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D HRD69_16845 ABC transporter permease K17214 K17214; inositol transport system permease protein
D HRD69_16850 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D HRD69_03965 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HRD69_03960 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HRD69_03955 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HRD69_03950 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D HRD69_05485 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_10430 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_05490 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D HRD69_19510 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D HRD69_05495 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HRD69_19505 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HRD69_05500 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HRD69_19500 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HRD69_12480 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HRD69_12485 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D HRD69_12490 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D HRD69_12475 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HRD69_12290 ABC transporter permease K10015 hisM; histidine transport system permease protein
D HRD69_15710 ABC transporter permease subunit K10015 hisM; histidine transport system permease protein
D HRD69_15715 ABC transporter permease subunit K10016 hisQ; histidine transport system permease protein
D HRD69_12285 hisQ; histidine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein
D HRD69_12295 hisP; histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_12280 hisJ; histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D HRD69_15720 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D HRD69_12625 glnH; glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D HRD69_12620 glnP; glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D HRD69_12615 glnQ; glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_18190 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein
D HRD69_18175 artJ; arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D HRD69_18185 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D HRD69_18180 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D HRD69_18170 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_11320 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D HRD69_11310 gltK; glutamate/aspartate ABC transporter permease GltK K10002 gltK; glutamate/aspartate transport system permease protein
D HRD69_11315 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D HRD69_11305 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_03360 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D HRD69_03365 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D HRD69_03370 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D HRD69_03375 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_13835 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HRD69_13840 tcyL; cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D HRD69_13845 yecC; L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_04035 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HRD69_04030 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D HRD69_04025 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D HRD69_04020 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HRD69_04015 livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HRD69_00255 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_05570 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_18305 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_00250 metI; methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D HRD69_05560 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HRD69_18295 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HRD69_00245 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_05565 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_18300 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_12500 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D HRD69_12505 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D HRD69_12510 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D HRD69_12515 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D HRD69_12355 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D HRD69_12520 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D HRD69_15055 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15060 oppA; oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_16015 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15065 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HRD69_15070 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HRD69_15075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HRD69_15080 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HRD69_05055 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D HRD69_05050 dppB; dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein
D HRD69_05045 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D HRD69_05040 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D HRD69_05035 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D HRD69_16085 sapA; peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D HRD69_16090 sapB; peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D HRD69_16095 sapC; peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D HRD69_16100 sapD; peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D HRD69_16105 sapF; peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D HRD69_18435 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D HRD69_18440 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D HRD69_18445 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D HRD69_18450 yejF; microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D HRD69_01685 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D HRD69_01690 fepD; Fe(3+)-siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D HRD69_01695 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D HRD69_01700 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HRD69_09420 fhuD; Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D HRD69_09425 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D HRD69_09415 fhuC; Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D HRD69_09460 btuF; vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D HRD69_16435 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D HRD69_16425 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D HRD69_16570 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D HRD69_16580 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D HRD69_16575 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HRD69_14765 yfeA; iron/manganese ABC transporter substrate-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D HRD69_14755 yfeC; iron/manganese ABC transporter permease subunit YfeC K11605 sitC; manganese/iron transport system permease protein
D HRD69_14750 yfeD; iron/manganese ABC transporter permease subunit YfeD K11606 sitD; manganese/iron transport system permease protein
D HRD69_14760 yfeB; iron/manganese ABC transporter ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D HRD69_13245 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D HRD69_13240 cbiM; cobalt ECF transporter S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HRD69_13250 energy-coupling factor ABC transporter transmembrane protein K02008 cbiQ; cobalt/nickel transport system permease protein
D HRD69_13255 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HRD69_08375 lsrB; autoinducer 2 ABC transporter substrate-binding protein LsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D HRD69_08385 lsrC; autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein
D HRD69_08380 lsrD; autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein
D HRD69_08390 lsrA; autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D HRD69_19220 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D HRD69_19185 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D HRD69_19190 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D HRD69_10945 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D HRD69_10950 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HRD69_17195 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D HRD69_17205 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D HRD69_17200 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HRD69_18765 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HRD69_18770 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D HRD69_18775 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HRD69_18780 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HRD69_08285 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D HRD69_08290 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D HRD69_02950 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HRD69_04050 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HRD69_04055 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HRD69_17970 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HRD69_10685 SmdA family multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HRD69_10690 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HRD69_02610 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_06395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_17280 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_19705 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HRD69_12105 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HRD69_04695 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HRD69_18070 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HRD69_18065 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HRD69_09735 ABC transporter permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_18100 macB; macrolide ABC transporter ATP-binding protein/permease MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_19180 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_01660 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HRD69_07155 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ymo02060]
D HRD69_19155 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HRD69_19150 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D HRD69_19160 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HRD69_17300 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HRD69_11415 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HRD69_15565 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D HRD69_20115 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_08520 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_18570 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HRD69_18840 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D HRD69_03045 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HRD69_05785 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HRD69_20415 chbA; PTS N,N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_17040 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_20430 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_17055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_20425 chbC; PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_17050 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_14380 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HRD69_14375 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D HRD69_14370 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D HRD69_09895 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D HRD69_09890 PTS sugar transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D HRD69_09885 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component
D HRD69_09880 PTS system mannose/fructose/sorbose family transporter subunit IID K02815 sorM; sorbose PTS system EIID component
D HRD69_19635 srlB; PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HRD69_19630 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HRD69_19625 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D HRD69_11790 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HRD69_11785 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HRD69_11780 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HRD69_18365 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D HRD69_18355 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HRD69_18360 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HRD69_00585 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HRD69_02975 npr; PTS phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D HRD69_02965 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ymo03070]
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_07315 type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D HRD69_07340 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V
D HRD69_07365 FliM/FliN family flagellar motor switch protein K03225 yscQ; type III secretion protein Q
D HRD69_07225 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D HRD69_07170 gspS; type II secretion system pilot lipoprotein GspS K02465 gspS; general secretion pathway protein S
D HRD69_07230 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C
D HRD69_07215 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D HRD69_07210 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D HRD69_07205 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D HRD69_07200 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D HRD69_07195 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D HRD69_07190 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D HRD69_07185 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D HRD69_07180 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D HRD69_02745 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HRD69_07220 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HRD69_00675 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_07175 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_10495 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HRD69_10500 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HRD69_03735 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HRD69_08020 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HRD69_06955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HRD69_10490 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HRD69_05585 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HRD69_09140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HRD69_09135 secM; secA regulator SecM K13301 secM; secretion monitor
D HRD69_04060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HRD69_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HRD69_10035 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HRD69_03875 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HRD69_03870 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HRD69_03865 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D HRD69_11230 tatA; Sec-independent protein translocase subunit TatA K03425 tatE; sec-independent protein translocase protein TatE
D HRD69_01215 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_02675 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_17675 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_01235 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_02705 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_17700 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_19760 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_01165 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_17595 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_19755 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_01185 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
D HRD69_02640 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D HRD69_17615 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
D HRD69_19740 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D HRD69_01245 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_02645 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_17710 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_19745 tssL; type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK
D HRD69_01230 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D HRD69_17695 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D HRD69_19795 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ymo02020]
D HRD69_10425 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HRD69_10420 phoB; phosphate response regulator transcription factor PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HRD69_15815 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HRD69_05485 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_10430 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_17170 phoQ; two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HRD69_17165 phoP; two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HRD69_06525 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HRD69_06520 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HRD69_12115 porin OmpC K09475 ompC; outer membrane pore protein C
D HRD69_17885 ompF; porin OmpF K09476 ompF; outer membrane pore protein F
D HRD69_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HRD69_04885 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HRD69_02370 mzrA; EnvZ/OmpR regulon moderator MzrA K25864 mzrA; modulator protein MzrA
D HRD69_15885 rstB; two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HRD69_15880 rstA; two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D HRD69_09475 degP; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HRD69_00775 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D HRD69_00780 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D HRD69_19590 baeS; two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HRD69_19595 baeR; two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HRD69_19575 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D HRD69_19580 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D HRD69_19585 mdtC; multidrug efflux RND transporter permease subunit MdtC K07789 mdtC; multidrug efflux pump
D HRD69_19365 acrD; multidrug efflux RND transporter permease AcrD K18324 acrD; multidrug efflux pump
D HRD69_07975 pmrB; two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D HRD69_07980 pmrA; two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D HRD69_16420 arnB; UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D HRD69_16805 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HRD69_16800 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HRD69_01715 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D HRD69_01725 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HRD69_01730 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D HRD69_14860 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HRD69_14865 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HRD69_02165 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_13555 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_02160 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_13560 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_02125 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_13810 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_02170 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_13820 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_02155 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_13565 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_11485 kdbD; two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HRD69_11480 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HRD69_11500 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D HRD69_11495 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D HRD69_11490 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D HRD69_11505 K(+)-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D HRD69_18375 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D HRD69_02825 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HRD69_08735 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HRD69_05605 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HRD69_09235 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D HRD69_13420 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D HRD69_13415 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D HRD69_13425 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D HRD69_13430 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D HRD69_13435 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HRD69_13440 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D HRD69_13445 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D HRD69_13455 anion permease K09477 citT; citrate:succinate antiporter
D HRD69_17080 dcuS; two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D HRD69_17085 dcuR; two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR
D HRD69_10065 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HRD69_12860 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HRD69_17090 2-hydroxycarboxylate transporter family protein K11616 maeN; malate:Na+ symporter
D HRD69_16935 narX; nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HRD69_15200 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HRD69_19355 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D HRD69_07680 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HRD69_07675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HRD69_07670 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D HRD69_07665 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D HRD69_05075 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D HRD69_13400 uhpC; MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D HRD69_05080 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D HRD69_05085 uhpA; transcriptional regulator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D HRD69_13405 MASE1 domain-containing protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D HRD69_13410 response regulator transcription factor K20264 fusR; two-component system, NarL family, response regulator FusR
D HRD69_00260 rcsF; Rcs stress response system protein RcsF K06080 rcsF; RcsF protein
D HRD69_12075 rcsC; two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D HRD69_12085 rcsD; phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D HRD69_12080 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D HRD69_09480 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HRD69_13955 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HRD69_09980 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D HRD69_02570 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_13370 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_02565 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D HRD69_07270 response regulator transcription factor K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D HRD69_13375 response regulator transcription factor K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D HRD69_09785 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HRD69_14595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14590 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14570 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14585 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_02510 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_04410 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_06260 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_14580 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_02505 fimbrial biogenesis usher protein K07347 fimD; outer membrane usher protein
D HRD69_04415 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_06265 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_13355 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_14575 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_15390 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19555 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19780 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_01750 tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D HRD69_01755 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D HRD69_01760 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HRD69_01765 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HRD69_01770 type II secretion system F family protein K12510 tadB; tight adherence protein B
D HRD69_01775 type II secretion system F family protein K12511 tadC; tight adherence protein C
D HRD69_00415 glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HRD69_20060 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D HRD69_05260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HRD69_05265 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_06145 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D HRD69_02955 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HRD69_20080 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HRD69_20070 glrR; two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HRD69_01620 hybO; hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D HRD69_01605 hybC; hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HRD69_02075 chemotaxis protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_13595 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_01655 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_05555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_11445 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_12610 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_13935 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_18670 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_00660 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_02175 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_07910 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_13585 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_05830 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D HRD69_13535 Tar ligand binding domain-containing protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D HRD69_13590 Tar ligand binding domain-containing protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D HRD69_14215 PAS domain-containing protein K03776 aer; aerotaxis receptor
D HRD69_02140 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_13580 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_02145 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_13575 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_02085 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_13605 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_02080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13600 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13315 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HRD69_07105 two component system sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D HRD69_07100 two component system response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D HRD69_11305 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_11310 gltK; glutamate/aspartate ABC transporter permease GltK K10002 gltK; glutamate/aspartate transport system permease protein
D HRD69_11315 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D HRD69_11320 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D HRD69_06705 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HRD69_05125 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D HRD69_01035 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_15800 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_17075 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HRD69_11615 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HRD69_16920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HRD69_11620 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HRD69_16925 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HRD69_11625 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HRD69_15495 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D HRD69_15500 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system
D HRD69_15505 type I secretion system permease/ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_04330 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HRD69_04325 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D HRD69_01680 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D HRD69_01675 FecR domain-containing protein K07165 fecR; transmembrane sensor
D HRD69_07145 FecR domain-containing protein K07165 fecR; transmembrane sensor
D HRD69_02240 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HRD69_13640 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D HRD69_01065 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HRD69_08135 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ymo02024]
D HRD69_10020 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HRD69_07755 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HRD69_15180 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HRD69_10075 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_11710 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_16360 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HRD69_14860 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HRD69_14865 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HRD69_20080 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HRD69_20070 glrR; two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HRD69_02165 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_13555 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_02160 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_13560 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_11480 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HRD69_13405 MASE1 domain-containing protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D HRD69_13410 response regulator transcription factor K20264 fusR; two-component system, NarL family, response regulator FusR
D HRD69_15790 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D HRD69_15795 amino acid permease K20265 gadC; glutamate:GABA antiporter
D HRD69_08375 lsrB; autoinducer 2 ABC transporter substrate-binding protein LsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D HRD69_08385 lsrC; autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein
D HRD69_08380 lsrD; autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein
D HRD69_08390 lsrA; autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D HRD69_08400 lsrK; autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D HRD69_08395 lsrR; transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor
D HRD69_08370 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D HRD69_08365 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D HRD69_11975 protein RhiA K20268 rhiA; rhizosphere induced protein
D HRD69_04035 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HRD69_04030 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D HRD69_04025 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D HRD69_04020 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HRD69_04015 livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HRD69_02710 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D HRD69_17490 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D HRD69_02715 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_07490 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_17495 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_05020 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D HRD69_05125 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D HRD69_05120 pdeR; cyclic di-GMP phosphodiesterase K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D HRD69_12095 Ig-like domain-containing protein K20276 bapA; large repetitive protein
D HRD69_09025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_16500 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_06705 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HRD69_03470 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D HRD69_15290 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HRD69_10510 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HRD69_15055 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15060 oppA; oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_16015 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15065 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HRD69_15070 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HRD69_15075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HRD69_15080 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HRD69_00050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_08245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_09795 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_00045 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_08240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_09800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_00040 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_08235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_09805 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_00035 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_08230 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_09810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_00030 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_08225 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_09815 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_05585 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HRD69_03735 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HRD69_08020 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HRD69_06955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HRD69_10490 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HRD69_09140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HRD69_04060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HRD69_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HRD69_10035 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ymo02030]
D HRD69_01655 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_05555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_11445 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_12610 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_13935 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_18670 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_00660 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_02175 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_07910 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_13585 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_05830 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D HRD69_13535 Tar ligand binding domain-containing protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D HRD69_13590 Tar ligand binding domain-containing protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D HRD69_14215 PAS domain-containing protein K03776 aer; aerotaxis receptor
D HRD69_03520 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HRD69_05355 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HRD69_12760 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HRD69_05055 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D HRD69_02145 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_13575 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_02140 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_13580 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_02085 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_13605 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_02090 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HRD69_13610 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HRD69_02080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13600 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13315 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HRD69_02075 chemotaxis protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_13595 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_02060 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_13765 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_02030 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_13735 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_02025 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_13730 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_02155 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_13565 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_02150 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_13570 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ymo02040]
D HRD69_02070 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HRD69_13775 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HRD69_02065 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_13770 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_02060 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_13765 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_02055 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_13760 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_02050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_13755 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_02045 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D HRD69_13750 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D HRD69_02040 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HRD69_13745 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HRD69_02035 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HRD69_13740 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HRD69_02030 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_13735 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_02025 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_13730 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_02020 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_13725 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_02015 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_13720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_02010 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_13715 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_02005 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_13710 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_02105 flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HRD69_13625 flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HRD69_02100 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_13620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_02095 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_13615 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_02235 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HRD69_13645 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HRD69_02230 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HRD69_13650 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HRD69_02225 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HRD69_13655 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HRD69_02220 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HRD69_13660 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HRD69_02215 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HRD69_13665 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HRD69_02210 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HRD69_13670 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HRD69_02205 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HRD69_13675 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HRD69_02200 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HRD69_13680 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HRD69_02195 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HRD69_13685 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HRD69_02190 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HRD69_13690 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HRD69_02185 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HRD69_13700 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HRD69_02180 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HRD69_13705 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HRD69_02125 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_13810 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_02120 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HRD69_13805 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HRD69_02115 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HRD69_13800 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HRD69_02110 flagellar protein FliT K02423 fliT; flagellar protein FliT
D HRD69_13795 fliT; flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT
D HRD69_02155 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_13565 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_02150 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_13570 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_02240 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HRD69_13640 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HRD69_02245 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HRD69_13635 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HRD69_13835 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HRD69_13825 fliZ; flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D HRD69_01985 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HRD69_02165 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_13555 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_02160 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_13560 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_02955 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HRD69_02170 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_13820 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ymo04980]
D HRD69_14735 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D HRD69_14740 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HRD69_03550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
D HRD69_02620 inverse autotransporter beta domain-containing protein K13735 yeeJ; adhesin/invasin
D HRD69_09200 inverse autotransporter beta-barrel domain-containing protein K13735 yeeJ; adhesin/invasin
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D HRD69_02620 inverse autotransporter beta domain-containing protein K13735 yeeJ; adhesin/invasin
D HRD69_09200 inverse autotransporter beta-barrel domain-containing protein K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ymo01501]
D HRD69_17885 ompF; porin OmpF K09476 ompF; outer membrane pore protein F
D HRD69_12115 porin OmpC K09475 ompC; outer membrane pore protein C
D HRD69_10605 ampG; muropeptide MFS transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HRD69_17230 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HRD69_09785 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HRD69_15055 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15060 oppA; oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_16015 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15065 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HRD69_15070 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HRD69_15075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HRD69_15080 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HRD69_10780 acrA; efflux RND transporter adaptor subunit AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D HRD69_10775 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01545 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_06565 mrcA; peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HRD69_11265 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HRD69_09065 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_14335 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_02455 bla; subclass B2 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:ymo01502]
D HRD69_09105 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HRD69_03440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_14855 dadX; catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_09075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HRD69_09080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HRD69_09095 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ymo01503]
D HRD69_17170 phoQ; two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HRD69_17165 phoP; two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HRD69_05090 eptB; kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D HRD69_14315 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D HRD69_16420 arnB; UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D HRD69_16415 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D HRD69_16410 arnA; bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D HRD69_16405 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D HRD69_16400 arnT; lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D HRD69_16395 arnE; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D HRD69_16390 arnF; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D HRD69_07975 pmrB; two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D HRD69_07980 pmrA; two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D HRD69_16200 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HRD69_16085 sapA; peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D HRD69_16090 sapB; peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D HRD69_16095 sapC; peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D HRD69_16100 sapD; peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D HRD69_16105 sapF; peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D HRD69_06210 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D HRD69_00275 nlpE; envelope stress response activation lipoprotein NlpE K06079 cutF; copper homeostasis protein (lipoprotein)
D HRD69_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HRD69_04885 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HRD69_00525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_07740 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_16295 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HRD69_09475 degP; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HRD69_01460 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_01995 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_05290 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_09715 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_06680 ppiA; peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HRD69_10780 acrA; efflux RND transporter adaptor subunit AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D HRD69_10775 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01545 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_00345 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HRD69_16455 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ymo01000]
C 01001 Protein kinases [BR:ymo01001]
D HRD69_14255 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D HRD69_08445 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRD69_19610 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRD69_10425 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HRD69_17170 phoQ; two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HRD69_06525 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HRD69_15885 rstB; two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HRD69_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HRD69_00775 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D HRD69_19590 baeS; two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HRD69_07975 pmrB; two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D HRD69_16805 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HRD69_14860 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HRD69_11485 kdbD; two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HRD69_02825 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HRD69_19165 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HRD69_16935 narX; nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HRD69_05080 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D HRD69_13405 MASE1 domain-containing protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D HRD69_12085 rcsD; phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D HRD69_12075 rcsC; two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D HRD69_09480 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HRD69_02570 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_13370 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_13420 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D HRD69_17080 dcuS; two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D HRD69_06400 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HRD69_19015 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HRD69_05260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HRD69_20080 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HRD69_02145 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_13575 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_07105 two component system sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:ymo01009]
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HRD69_08650 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ymo01002]
D HRD69_08840 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HRD69_02765 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HRD69_00675 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_07175 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_01745 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HRD69_01600 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D HRD69_12790 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D HRD69_11560 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HRD69_19845 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HRD69_02610 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_06395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_17280 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_15375 C40 family peptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HRD69_18425 mepS; bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HRD69_16230 C40 family peptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D HRD69_16385 C40 family peptidase K13695 nlpC; probable lipoprotein NlpC
D HRD69_12270 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HRD69_02835 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HRD69_05470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HRD69_11390 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HRD69_10555 yajL; protein deglycase YajL K03152 thiJ; protein deglycase [EC:3.5.1.124]
D HRD69_16295 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HRD69_17910 ldtD; L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D HRD69_11190 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D HRD69_11745 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D HRD69_17870 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HRD69_06200 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D HRD69_06210 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D HRD69_03185 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D HRD69_00545 ptrA; pitrilysin K01407 ptrA; protease III [EC:3.4.24.55]
D HRD69_01665 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HRD69_06150 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HRD69_07160 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HRD69_08280 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HRD69_19945 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HRD69_19395 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HRD69_17180 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HRD69_10330 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HRD69_16565 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HRD69_00410 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HRD69_01470 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HRD69_03825 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D HRD69_00835 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HRD69_09550 aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D HRD69_15890 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D HRD69_08005 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HRD69_14635 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HRD69_00910 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D HRD69_19460 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D HRD69_00370 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HRD69_12135 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D HRD69_13475 mtfA; DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase
D HRD69_15900 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D HRD69_09475 degP; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HRD69_02880 degQ; serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D HRD69_02885 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D HRD69_14425 prolyl oligopeptidase family serine peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HRD69_11250 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_18275 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_12445 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D HRD69_18695 ampH; D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D HRD69_07985 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HRD69_10625 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HRD69_10635 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HRD69_17805 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D HRD69_03480 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HRD69_20165 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HRD69_14430 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HRD69_14630 prc; carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HRD69_14955 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D HRD69_15260 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D HRD69_06445 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D HRD69_04800 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HRD69_10455 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HRD69_19615 tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HRD69_08105 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D HRD69_08110 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D HRD69_03115 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D HRD69_03200 tldD; metalloprotease TldD K03568 tldD; TldD protein
D HRD69_12045 eco; serine protease inhibitor ecotin K08276 eco; ecotin
D HRD69_19925 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D HRD69_07770 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D HRD69_07765 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ymo01003]
D HRD69_06420 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D HRD69_07470 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D HRD69_02815 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HRD69_19920 pbpC; peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HRD69_09410 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HRD69_06565 mrcA; peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HRD69_06025 transglycosylase domain-containing protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HRD69_04285 rffM; lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D HRD69_04295 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D HRD69_04340 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HRD69_17460 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D HRD69_10365 glycosyl transferase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D HRD69_16970 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ymo01005]
D HRD69_00345 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HRD69_16455 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HRD69_00340 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HRD69_09125 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HRD69_00355 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HRD69_11120 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HRD69_17965 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HRD69_17435 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HRD69_16560 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D HRD69_13465 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D HRD69_03355 lpxP; kdo(2)-lipid IV(A) palmitoleoyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D HRD69_18420 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D HRD69_04970 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HRD69_16400 arnT; lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D HRD69_14315 pagP; lipid IV(A) palmitoyltransferase PagP K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D HRD69_16200 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HRD69_05090 eptB; kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D HRD69_16730 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HRD69_17945 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HRD69_02935 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HRD69_02930 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HRD69_04965 rfaC; lipopolysaccharide heptosyltransferase RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D HRD69_04975 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D HRD69_04960 rfaF; ADP-heptose--LPS heptosyltransferase RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HRD69_08405 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D HRD69_10265 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HRD69_11005 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HRD69_00240 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HRD69_11010 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HRD69_01930 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HRD69_04955 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HRD69_10925 glycosyltransferase K13002 wbyL; glycosyltransferase [EC:2.4.1.-]
D HRD69_04290 wzyE; O-antigen assembly polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D HRD69_10965 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HRD69_04340 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ymo01011]
D HRD69_02890 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HRD69_03785 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HRD69_09100 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HRD69_09085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HRD69_09070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HRD69_09105 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HRD69_03440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_14855 dadX; catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D HRD69_04630 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HRD69_09080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HRD69_09095 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HRD69_01955 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_18250 ybjG; undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HRD69_16665 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HRD69_06565 mrcA; peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HRD69_09410 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HRD69_19920 pbpC; peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HRD69_11265 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HRD69_09065 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_14335 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_11250 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_18275 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HRD69_07985 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HRD69_18695 ampH; D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D HRD69_12445 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D HRD69_02815 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HRD69_06025 transglycosylase domain-containing protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HRD69_16295 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HRD69_17910 ldtD; L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D HRD69_12135 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D HRD69_16230 C40 family peptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D HRD69_15375 C40 family peptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HRD69_18425 mepS; bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HRD69_16565 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HRD69_03185 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D HRD69_08705 sltY; murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HRD69_00505 mltA; murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D HRD69_18905 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HRD69_01060 mltC; membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D HRD69_00195 mltD; murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D HRD69_14770 transglycosylase SLT domain-containing protein K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D HRD69_20095 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D HRD69_17320 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HRD69_11255 rlpA; endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HRD69_00525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_07740 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_14655 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_09190 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_16290 major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ymo01004]
D HRD69_17345 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HRD69_17350 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HRD69_12160 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HRD69_09745 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17330 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_17820 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HRD69_09760 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_15820 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17340 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HRD69_17810 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HRD69_00350 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HRD69_05575 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HRD69_11095 tesA; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HRD69_10705 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HRD69_15130 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D HRD69_10655 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D HRD69_07090 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HRD69_09025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_16500 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_03490 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HRD69_17355 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HRD69_01965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HRD69_01845 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ymo01008]
D HRD69_02465 type III polyketide synthase K15431 phlD; phloroglucinol synthase [EC:2.3.1.253]
D HRD69_13460 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01006 Prenyltransferases [BR:ymo01006]
D HRD69_10540 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HRD69_07950 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HRD69_00380 ispU; (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HRD69_07750 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HRD69_04790 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HRD69_03495 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HRD69_10575 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ymo01007]
D HRD69_19100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HRD69_11420 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HRD69_09385 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HRD69_16145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HRD69_06625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HRD69_11130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HRD69_16660 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HRD69_12895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HRD69_08835 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HRD69_08270 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HRD69_11295 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HRD69_00740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HRD69_16610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HRD69_17880 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HRD69_19885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HRD69_05765 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HRD69_05770 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HRD69_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HRD69_00270 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HRD69_14805 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HRD69_09975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HRD69_14830 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HRD69_14835 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HRD69_17890 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HRD69_05715 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D HRD69_11835 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HRD69_01380 pyridoxal phosphate-dependent aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D HRD69_19000 alaC; alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D HRD69_03435 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D HRD69_10215 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D HRD69_12970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HRD69_04950 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HRD69_12340 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HRD69_15560 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HRD69_06695 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HRD69_16910 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D HRD69_12330 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HRD69_09435 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HRD69_04540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HRD69_18000 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HRD69_16420 arnB; UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D HRD69_04305 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ymo00194]
D HRD69_05460 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HRD69_05455 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HRD69_05450 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HRD69_05445 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HRD69_05440 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HRD69_05435 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HRD69_05430 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HRD69_05425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HRD69_05420 atpI; F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ymo03000]
D HRD69_15535 araC; arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D HRD69_20410 chbR; transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D HRD69_08725 robA; MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D HRD69_13175 pocR; regulatory protein PocR K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D HRD69_04895 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HRD69_00480 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HRD69_04485 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D HRD69_03930 metR; HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D HRD69_08810 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D HRD69_04660 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HRD69_00870 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D HRD69_09020 leuO; transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D HRD69_15275 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D HRD69_16940 cbl; HTH-type transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D HRD69_03155 aaeR; HTH-type transcriptional activator AaeR K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D HRD69_04570 hdfR; HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D HRD69_18260 deoR; DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D HRD69_06440 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D HRD69_19650 DNA-binding transcriptional repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D HRD69_13520 LacI family DNA-binding transcriptional regulator K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D HRD69_00625 galR; HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HRD69_01500 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HRD69_05345 rbsR; ribose operon transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HRD69_05955 DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HRD69_12755 galS; HTH-type transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HRD69_04810 cytR; DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HRD69_09040 cra; catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D HRD69_08510 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D HRD69_03040 treR; HTH-type transcriptional regulator TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D HRD69_18845 LacI family DNA-binding transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D HRD69_16245 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D HRD69_06345 gntR; gluconate operon transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D HRD69_11940 substrate-binding domain-containing protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D HRD69_15570 malI; Mal regulon transcriptional regulator MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D HRD69_08200 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D HRD69_16870 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D HRD69_16440 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D HRD69_09210 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HRD69_18410 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D HRD69_02355 exuR; transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D HRD69_00085 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D HRD69_10785 acrR; multidrug efflux transporter transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D HRD69_05015 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HRD69_16205 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HRD69_04650 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D HRD69_12420 cecR; transcriptional regulator CecR K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D HRD69_05400 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D HRD69_13500 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_15705 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_18055 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_10680 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D HRD69_02715 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_07490 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_17495 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D HRD69_06460 malT; HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D HRD69_16170 rovA; virulence master transcriptional regulator RovA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D HRD69_10190 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D HRD69_11070 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D HRD69_06990 zntR; Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D HRD69_11435 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HRD69_03470 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D HRD69_03555 iclR; glyoxylate bypass operon transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D HRD69_14650 kdgR; DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D HRD69_06705 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HRD69_15845 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HRD69_19985 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D HRD69_07785 nsrR; nitric oxide-sensing transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D HRD69_15740 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HRD69_16550 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D HRD69_03780 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HRD69_03295 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HRD69_08710 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D HRD69_05210 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_06040 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_07485 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_07940 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_08330 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_15945 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_18550 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D HRD69_08975 sgrR; HTH-type transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D HRD69_17260 SgrR family transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D HRD69_08660 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HRD69_14510 helix-turn-helix domain-containing protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D HRD69_14920 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HRD69_15685 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D HRD69_12775 flhA; formate hydrogenlyase transcriptional activator FlhA K15836 fhlA; formate hydrogenlyase transcriptional activator
D HRD69_07570 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D HRD69_11755 modE; molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D HRD69_05640 PAS domain-containing protein K21829 dauR; D-arginine utilization repressor
D HRD69_08360 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator
D HRD69_04825 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D HRD69_13860 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HRD69_10615 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D HRD69_01285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HRD69_03850 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D HRD69_07930 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D HRD69_11400 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D HRD69_15615 mlc; ROK family transcriptional regulator Mlc K15545 mlc; transcriptional regulator of PTS gene
D HRD69_05795 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor
D HRD69_16035 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D HRD69_19445 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D HRD69_16080 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D HRD69_16065 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D HRD69_08395 lsrR; transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor
D HRD69_08505 dhaR; PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR K05880 dhaR; transcriptional activator for dhaKLM operon
D HRD69_03100 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D HRD69_20275 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D HRD69_01320 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D HRD69_05990 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D HRD69_06115 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D HRD69_00965 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D HRD69_09390 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HRD69_10505 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HRD69_10345 crl; sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl
D HRD69_09050 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ymo03021]
D HRD69_06980 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HRD69_03705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HRD69_03700 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HRD69_01985 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HRD69_09650 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HRD69_20195 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HRD69_12645 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HRD69_01680 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D HRD69_04045 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D HRD69_02955 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HRD69_02170 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_13820 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_08935 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D HRD69_08040 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HRD69_10520 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HRD69_03730 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HRD69_02855 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D HRD69_02850 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D HRD69_20190 rseA; anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D HRD69_20185 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D HRD69_20180 rseC; SoxR-reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D HRD69_09390 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HRD69_07990 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HRD69_06515 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D HRD69_04345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HRD69_00295 rof; Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:ymo03019]
D HRD69_17380 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HRD69_03215 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HRD69_20160 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HRD69_07790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HRD69_07705 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HRD69_04355 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HRD69_12425 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HRD69_08080 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HRD69_04155 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HRD69_08065 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HRD69_04345 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HRD69_04870 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HRD69_08790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HRD69_07630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HRD69_07755 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HRD69_19515 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HRD69_00590 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HRD69_09980 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D HRD69_03240 csrD; RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD
D HRD69_04785 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D HRD69_08260 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D HRD69_02970 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D HRD69_15915 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D HRD69_09405 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D HRD69_16345 rprA; antisense sRNA RprA K18518 rprA; small regulatory RNA RprA
C 03041 Spliceosome
C 03011 Ribosome [BR:ymo03011]
D HRD69_17985 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HRD69_00405 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HRD69_06885 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HRD69_06975 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HRD69_06940 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HRD69_07820 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HRD69_06825 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HRD69_06925 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HRD69_02860 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HRD69_06850 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HRD69_06970 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HRD69_06820 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HRD69_06965 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HRD69_06920 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HRD69_08060 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HRD69_10040 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HRD69_06900 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HRD69_07830 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HRD69_06875 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HRD69_08815 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HRD69_01975 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HRD69_03720 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HRD69_06870 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HRD69_06855 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HRD69_06860 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HRD69_06915 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HRD69_06930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HRD69_07835 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HRD69_03715 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HRD69_03725 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HRD69_03710 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HRD69_02865 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HRD69_06905 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HRD69_06950 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HRD69_06890 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HRD69_06985 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HRD69_06935 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HRD69_10055 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HRD69_14820 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HRD69_07955 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HRD69_06880 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HRD69_06865 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HRD69_06910 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HRD69_07960 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HRD69_04995 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HRD69_06895 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HRD69_06945 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HRD69_04820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HRD69_10760 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HRD69_17360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HRD69_04990 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HRD69_05600 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HRD69_14815 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HRD69_06960 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HRD69_10755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HRD69_18475 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HRD69_00220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_05330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_00235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_03610 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_05320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_00225 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_03595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ymo03009]
D HRD69_20160 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HRD69_14255 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D HRD69_07705 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HRD69_20155 era; GTPase Era K03595 era; GTPase
D HRD69_07970 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HRD69_09390 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HRD69_08040 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HRD69_10520 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HRD69_03730 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HRD69_18465 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HRD69_08900 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HRD69_07010 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HRD69_08570 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HRD69_04065 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HRD69_00955 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HRD69_05415 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HRD69_09055 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HRD69_02790 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HRD69_06205 rsmJ; 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D HRD69_14340 rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HRD69_07795 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HRD69_08000 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HRD69_12605 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D HRD69_02300 rlmG; 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D HRD69_11270 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HRD69_17745 rlmI; 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HRD69_06195 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D HRD69_17850 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D HRD69_00470 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D HRD69_19905 trmG_rlmN; bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HRD69_18195 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D HRD69_08930 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HRD69_13330 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HRD69_15245 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HRD69_17375 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HRD69_10100 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HRD69_17140 rluE; 23S rRNA pseudouridine(2457) synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D HRD69_13340 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D HRD69_10175 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D HRD69_08585 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HRD69_16680 rimJ; ribosomal protein S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D HRD69_10045 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D HRD69_18010 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D HRD69_03285 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HRD69_12125 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D HRD69_17175 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D HRD69_19710 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D HRD69_17380 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HRD69_03215 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HRD69_00970 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HRD69_14415 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D HRD69_08080 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HRD69_20210 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D HRD69_07700 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HRD69_19870 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HRD69_07760 hflX; GTPase HflX K03665 hflX; GTPase
D HRD69_07040 tsaC; L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HRD69_05160 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HRD69_08050 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D HRD69_08035 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D HRD69_11135 ybcJ; ribosome-associated protein YbcJ K14761 rlbA; ribosome-associated protein
D HRD69_11275 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D HRD69_11340 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D HRD69_07995 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D HRD69_05810 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein
D HRD69_03120 ribosome-associated protein K09889 yjgA; ribosome-associated protein
D HRD69_17825 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D HRD69_02960 hpf; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D HRD69_10090 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D HRD69_16790 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D HRD69_17365 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ymo03016]
D HRD69_01950 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HRD69_19100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HRD69_00270 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HRD69_08835 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HRD69_11295 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HRD69_12895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HRD69_11420 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HRD69_16660 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HRD69_00740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HRD69_16610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HRD69_09975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HRD69_17880 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HRD69_14805 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HRD69_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HRD69_11130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HRD69_08270 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HRD69_19885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HRD69_14830 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HRD69_14835 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HRD69_16145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HRD69_06625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HRD69_05235 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HRD69_17250 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HRD69_01045 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HRD69_00265 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D HRD69_12240 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HRD69_08055 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HRD69_09630 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D HRD69_19980 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HRD69_07040 tsaC; L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HRD69_07750 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HRD69_05580 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HRD69_05410 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HRD69_14965 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HRD69_07865 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HRD69_05595 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HRD69_02785 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D HRD69_16220 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D HRD69_06135 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HRD69_15365 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D HRD69_16495 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HRD69_09400 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D HRD69_08680 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D HRD69_05765 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HRD69_05770 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HRD69_09385 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HRD69_11055 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HRD69_20100 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HRD69_03465 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D HRD69_03290 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HRD69_12430 dusC; tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D HRD69_11350 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HRD69_16640 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D HRD69_16645 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D HRD69_17930 cmoM; tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D HRD69_04640 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D HRD69_10050 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HRD69_10175 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D HRD69_05165 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D HRD69_19990 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D HRD69_04900 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HRD69_20205 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D HRD69_00440 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D HRD69_08930 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HRD69_13330 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HRD69_17150 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HRD69_16000 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D HRD69_04095 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HRD69_06815 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HRD69_06810 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HRD69_06805 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HRD69_17735 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HRD69_19970 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D HRD69_00795 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D HRD69_12155 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D HRD69_10475 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HRD69_10660 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HRD69_09520 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HRD69_09515 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HRD69_00455 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HRD69_07725 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HRD69_10485 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HRD69_10550 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HRD69_00305 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HRD69_19415 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D HRD69_16510 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HRD69_01970 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HRD69_07735 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HRD69_00500 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HRD69_07790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HRD69_08065 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HRD69_05820 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ymo03012]
D HRD69_15325 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D HRD69_08045 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HRD69_14810 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HRD69_06765 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HRD69_00400 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HRD69_03740 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_06835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_06830 fusA; elongation factor G K02355 fusA; elongation factor G
D HRD69_09865 fusA; elongation factor G K02355 fusA; elongation factor G
D HRD69_05870 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D HRD69_16750 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HRD69_00390 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HRD69_16745 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HRD69_16780 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HRD69_18080 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HRD69_07650 efp; elongation factor P K02356 efp; elongation factor P
D HRD69_18395 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D HRD69_07685 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HRD69_07645 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D HRD69_12145 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D HRD69_00745 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HRD69_08590 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D HRD69_06995 alternative ribosome-rescue factor A K09890 arfA; alternative ribosome-rescue factor
D HRD69_00280 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ymo03110]
D HRD69_18085 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D HRD69_10110 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HRD69_10630 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HRD69_04795 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HRD69_08790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HRD69_19960 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D HRD69_09825 molecular chaperone HscC K04045 hscC; molecular chaperone HscC
D HRD69_19540 yegD; molecular chaperone K04046 yegD; hypothetical chaperone protein
D HRD69_07630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HRD69_08795 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HRD69_00705 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D HRD69_08920 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D HRD69_19965 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D HRD69_06540 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D HRD69_20225 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HRD69_05655 ibpA; heat shock chaperone IbpA K04080 ibpA; molecular chaperone IbpA
D HRD69_05660 ibpB; heat shock chaperone IbpB K04081 ibpB; molecular chaperone IbpB
D HRD69_06545 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D HRD69_07625 co-chaperone GroES K04078 groES; chaperonin GroES
D HRD69_09475 degP; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HRD69_08005 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HRD69_05425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HRD69_02510 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_04410 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_06260 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_14580 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HRD69_04880 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D HRD69_20455 hdeB; acid-activated periplasmic chaperone HdeB K19778 hdeB; acid stress chaperone HdeB
D HRD69_14245 hdeB; acid-activated periplasmic chaperone HdeB K19778 hdeB; acid stress chaperone HdeB
D HRD69_01590 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D HRD69_12845 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D HRD69_01585 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D HRD69_18960 molecular chaperone K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HRD69_11430 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HRD69_06680 ppiA; peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HRD69_11125 ppiB; peptidylprolyl isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HRD69_10645 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HRD69_06795 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D HRD69_07850 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D HRD69_08845 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D HRD69_06785 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D HRD69_04400 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HRD69_08910 surA; peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HRD69_04350 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D HRD69_10170 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D HRD69_11085 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D HRD69_18235 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D HRD69_04920 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D HRD69_16225 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D HRD69_01460 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_01995 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_05290 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_09715 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HRD69_16450 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D HRD69_00755 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HRD69_07600 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D HRD69_17510 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D HRD69_18750 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ymo04131]
D HRD69_19910 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HRD69_14930 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HRD69_11715 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_16285 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_16555 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ymo03051]
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ymo03032]
D HRD69_00180 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HRD69_03630 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D HRD69_10640 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HRD69_14840 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HRD69_17980 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HRD69_05605 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HRD69_03445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HRD69_01980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_00330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HRD69_05610 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HRD69_08275 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HRD69_11285 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HRD69_17310 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HRD69_00175 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HRD69_10820 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HRD69_14435 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D HRD69_00335 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_15595 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D HRD69_06610 dam; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HRD69_11460 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D HRD69_19470 hda; DnaA inactivator Hda K10763 hda; DnaA-homolog protein
D HRD69_12070 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HRD69_05620 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HRD69_01850 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HRD69_01870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HRD69_15270 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HRD69_14970 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ymo03036]
D HRD69_20160 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HRD69_15035 hns; DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS
D HRD69_03630 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D HRD69_10640 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HRD69_14840 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HRD69_17980 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HRD69_00705 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D HRD69_00700 cbpM; chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM
D HRD69_08725 robA; MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D HRD69_05605 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HRD69_02805 diaA; DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein
D HRD69_17750 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D HRD69_12630 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D HRD69_03295 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HRD69_07755 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HRD69_00870 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D HRD69_13500 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_15705 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_18055 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HRD69_18480 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D HRD69_17915 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D HRD69_17920 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D HRD69_17925 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D HRD69_09115 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HRD69_09615 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D HRD69_04055 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HRD69_09065 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_14335 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HRD69_18050 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HRD69_09060 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HRD69_04805 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D HRD69_09110 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D HRD69_09090 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HRD69_04050 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HRD69_09120 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HRD69_19135 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D HRD69_00845 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D HRD69_04780 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D HRD69_17860 cell division protein ZapC K18657 zapC; cell division protein ZapC
D HRD69_09155 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D HRD69_02870 cell division protein ZapE K06916 zapE; cell division protein ZapE
D HRD69_07845 lysine transporter LysM K07269 ytfB; cell division protein YtfB
D HRD69_00525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_07740 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_10780 acrA; efflux RND transporter adaptor subunit AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D HRD69_16480 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HRD69_16485 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HRD69_16490 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HRD69_17790 sulA; cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D HRD69_05015 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HRD69_11460 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D HRD69_03235 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HRD69_03230 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HRD69_03225 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HRD69_11260 mrdB; peptidoglycan glycosyltransferase MrdB K05837 rodA; rod shape determining protein RodA
D HRD69_01285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HRD69_01850 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HRD69_01870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HRD69_05410 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HRD69_05415 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HRD69_04210 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HRD69_00760 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HRD69_12900 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HRD69_17295 putative adenosine monophosphate-protein transferase Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HRD69_05280 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ymo03400]
D HRD69_15840 ogt; methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HRD69_11520 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HRD69_20220 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HRD69_01050 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HRD69_15445 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HRD69_09145 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HRD69_18370 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HRD69_05010 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HRD69_04895 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HRD69_13780 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HRD69_05755 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HRD69_04985 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HRD69_14985 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HRD69_18350 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HRD69_03640 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D HRD69_00750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HRD69_05145 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_19130 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HRD69_05285 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HRD69_03425 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HRD69_12360 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D HRD69_13960 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HRD69_20315 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_04200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HRD69_03705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HRD69_03700 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HRD69_06980 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HRD69_17210 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HRD69_09655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HRD69_07745 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HRD69_00595 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D HRD69_13015 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HRD69_19855 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HRD69_10545 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HRD69_00330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HRD69_05610 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HRD69_08275 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HRD69_11285 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HRD69_17310 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HRD69_00175 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HRD69_10820 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HRD69_14435 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_06610 dam; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HRD69_00540 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HRD69_00550 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HRD69_00535 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HRD69_09965 recA; recombinase RecA K03553 recA; recombination protein RecA
D HRD69_16590 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HRD69_16585 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HRD69_16595 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HRD69_04815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HRD69_07825 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D HRD69_10805 primosomal replication protein K04067 priC; primosomal replication protein N''
D HRD69_10410 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D HRD69_10415 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D HRD69_08655 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HRD69_05615 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HRD69_05170 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HRD69_20150 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HRD69_10830 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HRD69_20235 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HRD69_10400 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D HRD69_18470 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D HRD69_06685 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D HRD69_12070 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HRD69_05620 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HRD69_15270 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HRD69_03630 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D HRD69_10640 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HRD69_03295 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HRD69_14840 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HRD69_17980 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HRD69_04155 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HRD69_15035 hns; DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS
D HRD69_10325 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HRD69_03480 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HRD69_08940 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D HRD69_06050 dinD; DNA damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D HRD69_17395 dinI; DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D HRD69_09970 recX; recombination regulator RecX K03565 recX; regulatory protein
D HRD69_04395 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D HRD69_17770 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D HRD69_12585 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HRD69_16515 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HRD69_00105 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_12060 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HRD69_00110 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HRD69_12055 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ymo03029]
D HRD69_08045 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HRD69_14810 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HRD69_00400 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HRD69_03740 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_06835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_06830 fusA; elongation factor G K02355 fusA; elongation factor G
D HRD69_09865 fusA; elongation factor G K02355 fusA; elongation factor G
D HRD69_20155 era; GTPase Era K03595 era; GTPase
D HRD69_16145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HRD69_11295 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HRD69_16610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HRD69_16660 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HRD69_03420 ssb1; single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein
D HRD69_00365 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HRD69_08790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HRD69_20225 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HRD69_07630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HRD69_07625 co-chaperone GroES K04078 groES; chaperonin GroES
D HRD69_08795 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HRD69_19980 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HRD69_19965 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D HRD69_16225 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D HRD69_12900 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HRD69_10575 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HRD69_05585 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ymo02000]
D HRD69_17970 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HRD69_10685 SmdA family multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HRD69_10690 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HRD69_15495 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D HRD69_15505 type I secretion system permease/ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D HRD69_02610 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_06395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_17280 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_19705 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HRD69_14260 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HRD69_12105 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HRD69_04695 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HRD69_18070 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HRD69_18065 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HRD69_09735 ABC transporter permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_18100 macB; macrolide ABC transporter ATP-binding protein/permease MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_19180 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HRD69_01660 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HRD69_07155 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HRD69_17845 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HRD69_19245 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_04865 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HRD69_19240 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D HRD69_19235 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D HRD69_19230 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HRD69_11765 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HRD69_11770 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HRD69_11775 modC; molybdenum ABC transporter ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HRD69_11750 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D HRD69_02440 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_06740 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D HRD69_02450 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_06750 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D HRD69_02445 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_06745 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HRD69_13395 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_18925 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_19380 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HRD69_13390 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HRD69_19375 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HRD69_13385 fbpC; ferric ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_18935 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_19370 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HRD69_08960 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D HRD69_08955 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D HRD69_08950 thiQ; thiamine ABC transporter ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D HRD69_18220 potF; spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D HRD69_18205 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D HRD69_18210 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D HRD69_18215 potG; putrescine ABC transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D HRD69_00125 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HRD69_00115 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HRD69_12540 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D HRD69_12545 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D HRD69_12555 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D HRD69_12550 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HRD69_03520 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HRD69_03525 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D HRD69_03530 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D HRD69_03515 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HRD69_15520 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D HRD69_15530 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D HRD69_15525 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D HRD69_14675 carbohydrate ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D HRD69_14690 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein
D HRD69_14685 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein
D HRD69_14680 ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D HRD69_12760 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HRD69_12770 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D HRD69_12765 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D HRD69_05940 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D HRD69_05950 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D HRD69_05945 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D HRD69_05355 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HRD69_05360 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HRD69_05365 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HRD69_04590 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D HRD69_04575 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D HRD69_04580 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D HRD69_04585 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D HRD69_09910 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HRD69_09925 ABC transporter permease K17203 eryF; erythritol transport system permease protein
D HRD69_09920 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HRD69_16855 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D HRD69_16845 ABC transporter permease K17214 K17214; inositol transport system permease protein
D HRD69_16850 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D HRD69_03965 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HRD69_03960 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HRD69_03955 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HRD69_03950 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D HRD69_08375 lsrB; autoinducer 2 ABC transporter substrate-binding protein LsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D HRD69_08385 lsrC; autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein
D HRD69_08380 lsrD; autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein
D HRD69_08390 lsrA; autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D HRD69_02910 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HRD69_18865 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HRD69_02915 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HRD69_18875 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HRD69_02920 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HRD69_18870 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HRD69_18860 membrane integrity-associated transporter subunit PqiC K18480 linN; cholesterol transport system auxiliary component
D HRD69_02905 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D HRD69_02900 mlaB; lipid asymmetry maintenance protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D HRD69_03350 autoinducer 2 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HRD69_12890 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HRD69_13050 autoinducer 2 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HRD69_03335 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D HRD69_03340 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D HRD69_12995 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D HRD69_13035 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D HRD69_13040 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D HRD69_03345 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HRD69_13000 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HRD69_13045 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HRD69_05485 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_10430 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HRD69_05490 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D HRD69_19510 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D HRD69_05495 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HRD69_19505 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HRD69_05500 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HRD69_19500 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HRD69_12480 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HRD69_12485 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D HRD69_12490 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D HRD69_12475 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HRD69_12290 ABC transporter permease K10015 hisM; histidine transport system permease protein
D HRD69_15710 ABC transporter permease subunit K10015 hisM; histidine transport system permease protein
D HRD69_15715 ABC transporter permease subunit K10016 hisQ; histidine transport system permease protein
D HRD69_12285 hisQ; histidine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein
D HRD69_12295 hisP; histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_12280 hisJ; histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D HRD69_15720 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D HRD69_12625 glnH; glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D HRD69_12620 glnP; glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D HRD69_12615 glnQ; glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_18190 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein
D HRD69_18175 artJ; arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D HRD69_18185 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D HRD69_18180 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D HRD69_18170 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_11320 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D HRD69_11310 gltK; glutamate/aspartate ABC transporter permease GltK K10002 gltK; glutamate/aspartate transport system permease protein
D HRD69_11315 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D HRD69_11305 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_03360 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D HRD69_03365 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D HRD69_03370 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D HRD69_03375 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_13835 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HRD69_13840 tcyL; cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D HRD69_13845 yecC; L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_04035 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HRD69_04030 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D HRD69_04025 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D HRD69_04020 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HRD69_04015 livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HRD69_00255 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_05570 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_18305 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HRD69_00250 metI; methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D HRD69_05560 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HRD69_18295 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HRD69_00245 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_05565 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_18300 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HRD69_12500 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D HRD69_12505 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D HRD69_12510 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D HRD69_12515 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D HRD69_12355 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D HRD69_12520 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D HRD69_05510 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HRD69_09830 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HRD69_05515 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HRD69_05520 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HRD69_09835 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HRD69_09840 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HRD69_09845 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HRD69_15055 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15060 oppA; oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_16015 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D HRD69_15065 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HRD69_15070 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HRD69_15075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HRD69_15080 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HRD69_05055 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D HRD69_05050 dppB; dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein
D HRD69_05045 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D HRD69_05040 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D HRD69_05035 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D HRD69_16085 sapA; peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D HRD69_16090 sapB; peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D HRD69_16095 sapC; peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D HRD69_16100 sapD; peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D HRD69_16105 sapF; peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D HRD69_00050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_08245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_09795 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HRD69_00045 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_08240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_09800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HRD69_00040 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_08235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_09805 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HRD69_00035 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_08230 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_09810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HRD69_00030 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_08225 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_09815 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HRD69_18435 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D HRD69_18440 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D HRD69_18445 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D HRD69_18450 yejF; microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D HRD69_09420 fhuD; Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D HRD69_09425 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D HRD69_09415 fhuC; Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D HRD69_07415 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D HRD69_07410 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D HRD69_07405 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D HRD69_01685 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D HRD69_01690 fepD; Fe(3+)-siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D HRD69_01695 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D HRD69_01700 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HRD69_01490 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D HRD69_01480 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D HRD69_01485 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D HRD69_01475 ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D HRD69_09460 btuF; vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D HRD69_16435 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D HRD69_16425 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D HRD69_16570 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D HRD69_16580 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D HRD69_16575 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HRD69_14765 yfeA; iron/manganese ABC transporter substrate-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D HRD69_14755 yfeC; iron/manganese ABC transporter permease subunit YfeC K11605 sitC; manganese/iron transport system permease protein
D HRD69_14750 yfeD; iron/manganese ABC transporter permease subunit YfeD K11606 sitD; manganese/iron transport system permease protein
D HRD69_14760 yfeB; iron/manganese ABC transporter ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D HRD69_13245 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D HRD69_13250 energy-coupling factor ABC transporter transmembrane protein K02008 cbiQ; cobalt/nickel transport system permease protein
D HRD69_13240 cbiM; cobalt ECF transporter S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HRD69_13255 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HRD69_10750 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HRD69_10745 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HRD69_10740 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D HRD69_19185 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D HRD69_19220 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D HRD69_19190 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D HRD69_10945 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D HRD69_10950 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HRD69_08285 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D HRD69_08290 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D HRD69_02950 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HRD69_12400 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein
D HRD69_12405 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D HRD69_12410 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D HRD69_12415 hlyD; secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG
D HRD69_17195 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D HRD69_17205 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D HRD69_17200 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HRD69_18765 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HRD69_18770 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D HRD69_18775 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HRD69_18780 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HRD69_04050 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HRD69_04055 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HRD69_02425 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HRD69_08095 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HRD69_08100 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HRD69_09335 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HRD69_09330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HRD69_11105 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D HRD69_12720 darB; darobactin export ABC transporter permease subunit K02004 ABC.CD.P; putative ABC transport system permease protein
D HRD69_17010 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D HRD69_17015 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D HRD69_11100 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HRD69_12710 darD; darobactin export ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HRD69_17005 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HRD69_16315 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HRD69_15545 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D HRD69_16270 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D HRD69_13310 EmmdR/YeeO family multidrug/toxin efflux MATE transporter K26937 dinF; MATE family, multidrug efflux pump
D HRD69_08990 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D HRD69_13300 MFS transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease
D HRD69_12705 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D HRD69_08775 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D HRD69_01525 proP; glycine betaine/L-proline transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D HRD69_15930 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D HRD69_01495 MHS family MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D HRD69_19025 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HRD69_19250 MFS transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D HRD69_00715 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D HRD69_02350 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D HRD69_07580 MFS transporter K12299 garP; MFS transporter, ACS family, probable galactarate transporter
D HRD69_20015 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D HRD69_04125 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D HRD69_05075 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D HRD69_13400 uhpC; MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D HRD69_00610 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D HRD69_10605 ampG; muropeptide MFS transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HRD69_05710 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HRD69_14875 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HRD69_18460 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HRD69_04760 emrD; multidrug efflux MFS transporter EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D HRD69_05905 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D HRD69_17445 mdtG; multidrug efflux MFS transporter MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D HRD69_16685 mdtH; multidrug efflux MFS transporter MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D HRD69_00215 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HRD69_00640 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HRD69_05680 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HRD69_10180 emrB; multidrug efflux MFS transporter permease subunit EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D HRD69_18885 SmvA family efflux MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D HRD69_14640 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D HRD69_11040 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D HRD69_15605 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D HRD69_18030 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D HRD69_06655 tsgA; MFS transporter TsgA K06141 tsgA; MFS transporter, TsgA protein
D HRD69_19155 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HRD69_00585 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HRD69_19150 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D HRD69_02975 npr; PTS phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D HRD69_18365 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D HRD69_19160 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HRD69_17300 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HRD69_11415 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HRD69_15565 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D HRD69_20115 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_08520 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HRD69_18570 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HRD69_18840 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D HRD69_03045 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HRD69_18355 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HRD69_05785 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HRD69_20415 chbA; PTS N,N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_17040 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HRD69_20430 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_17055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HRD69_20425 chbC; PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_17050 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HRD69_19635 srlB; PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HRD69_19630 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HRD69_19625 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D HRD69_14380 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HRD69_14375 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D HRD69_14370 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D HRD69_09895 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D HRD69_09890 PTS sugar transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D HRD69_09885 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component
D HRD69_09880 PTS system mannose/fructose/sorbose family transporter subunit IID K02815 sorM; sorbose PTS system EIID component
D HRD69_11790 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HRD69_11785 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HRD69_11780 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HRD69_02965 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HRD69_08470 dhaM; dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HRD69_12590 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D HRD69_04775 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D HRD69_13170 pduF; propanediol diffusion facilitator PduF K27261 pduF; propanediol uptake facilitator
D HRD69_20450 kch; voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel
D HRD69_10700 amtB; ammonium transporter AmtB K03320 amt; ammonium transporter, Amt family
D HRD69_20435 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_03415 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_14545 yfcF; glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_16135 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_18320 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HRD69_02855 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D HRD69_18015 focA; formate transporter FocA K06212 focA; formate transporter
D HRD69_06635 nirC; nitrite transporter NirC K02598 nirC; nitrite transporter
D HRD69_07000 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D HRD69_07385 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D HRD69_10795 mscK; mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel
D HRD69_07690 mscM; miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel
D HRD69_00885 mscS; small-conductance mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel
D HRD69_19530 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D HRD69_20465 yut; urea transporter K08717 utp; urea transporter
D HRD69_02155 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_13565 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_02150 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_13570 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_01805 exbB; tol-pal system-associated acyl-CoA thioesterase K03561 exbB; biopolymer transport protein ExbB
D HRD69_01800 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D HRD69_11640 tolQ; Tol-Pal system protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D HRD69_11645 tolR; colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR
D HRD69_04175 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D HRD69_16005 zntB; zinc transporter ZntB K16074 zntB; zinc transporter
D HRD69_20440 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D HRD69_20445 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D HRD69_11220 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D HRD69_07880 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HRD69_10025 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HRD69_17885 ompF; porin OmpF K09476 ompF; outer membrane pore protein F
D HRD69_12580 ompF2; porin OmpF2 K11929 phoE; outer membrane pore protein E
D HRD69_12115 porin OmpC K09475 ompC; outer membrane pore protein C
D HRD69_03510 maltoporin K02024 lamB; maltoporin
D HRD69_08525 carbohydrate porin K16077 scrY; sucrose porin
D HRD69_17795 ompA; porin OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HRD69_12665 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X
D HRD69_18720 fadL; long-chain fatty acid transporter FadL K06076 fadL; long-chain fatty acid transport protein
D HRD69_02505 fimbrial biogenesis usher protein K07347 fimD; outer membrane usher protein
D HRD69_04415 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_06265 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_13355 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_14575 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_15390 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19555 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19780 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_01515 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_02305 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_11170 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_15195 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_01415 autotransporter domain-containing esterase K12686 apeE; outer membrane lipase/esterase
D HRD69_09235 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D HRD69_04635 btuB; TonB-dependent vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D HRD69_04700 heme acquisition hemophore HasA K12545 hasA; heme acquisition protein HasA
D HRD69_04705 heme acquisition hemophore HasA K12545 hasA; heme acquisition protein HasA
D HRD69_04710 heme acquisition hemophore HasA K12545 hasA; heme acquisition protein HasA
D HRD69_04715 heme acquisition hemophore HasA K12545 hasA; heme acquisition protein HasA
D HRD69_04720 heme acquisition hemophore HasA K12545 hasA; heme acquisition protein HasA
D HRD69_04725 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16152 hasR; heme acquisition protein HasR
D HRD69_18325 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D HRD69_07425 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HRD69_16370 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HRD69_06665 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HRD69_14355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HRD69_17570 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_12100 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D HRD69_00365 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HRD69_19875 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D HRD69_19435 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D HRD69_10095 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D HRD69_20240 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D HRD69_07890 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D HRD69_07895 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D HRD69_05025 porin K22110 kdgM; oligogalacturonate-specific porin family protein
D HRD69_14670 porin K22110 kdgM; oligogalacturonate-specific porin family protein
D HRD69_02945 lptA; lipopolysaccharide ABC transporter substrate-binding protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D HRD69_02940 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D HRD69_08915 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D HRD69_11290 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D HRD69_07460 BCSC C-terminal domain-containing protein K20543 bcsC; cellulose synthase operon protein C
D HRD69_00315 hypothetical protein K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D HRD69_11335 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D HRD69_03395 CidA/LrgA family protein K06518 cidA; holin-like protein
D HRD69_12875 CidA/LrgA family protein K06518 cidA; holin-like protein
D HRD69_13165 pduA; propanediol utilization microcompartment protein PduA K27260 pduA; bacterial microcompartment shell protein
D HRD69_18680 MFS transporter K16210 togT; oligogalacturonide transporter
D HRD69_18330 amino acid permease K11733 lysP; lysine-specific permease
D HRD69_09205 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D HRD69_14310 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D HRD69_10440 proY; proline-specific permease ProY K11736 proY; proline-specific permease ProY
D HRD69_13905 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D HRD69_17095 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D HRD69_05105 amino acid permease K16234 hutT; histidine transporter
D HRD69_18900 APC family permease K14052 puuP; putrescine importer
D HRD69_08130 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D HRD69_08415 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D HRD69_14265 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D HRD69_15870 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D HRD69_01540 eat; ethanolamine permease K16238 eat; ethanolamine permease
D HRD69_15795 amino acid permease K20265 gadC; glutamate:GABA antiporter
D HRD69_01925 yjeH; L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter
D HRD69_11705 zitB; CDF family zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HRD69_04875 fieF; CDF family cation-efflux transporter FieF K13283 fieF; ferrous-iron efflux pump FieF
D HRD69_01730 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D HRD69_10775 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01545 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_19365 acrD; multidrug efflux RND transporter permease AcrD K18324 acrD; multidrug efflux pump
D HRD69_19580 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D HRD69_19585 mdtC; multidrug efflux RND transporter permease subunit MdtC K07789 mdtC; multidrug efflux pump
D HRD69_15985 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D HRD69_16525 mdtI; multidrug/spermidine efflux SMR transporter subunit MdtI K11742 mdtI; spermidine export protein MdtI
D HRD69_16530 mdtJ; multidrug/spermidine efflux SMR transporter subunit MdtJ K11743 mdtJ; spermidine export protein MdtJ
D HRD69_11470 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D HRD69_12660 rhtA; threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D HRD69_04170 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D HRD69_16395 arnE; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D HRD69_15640 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D HRD69_20135 gntP; gluconate permease GntP K16321 gntP; high-affinity gluconate transporter
D HRD69_06350 gntT; gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D HRD69_07610 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D HRD69_10065 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HRD69_16950 chaA; sodium-potassium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter
D HRD69_02925 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D HRD69_06230 pitA; inorganic phosphate transporter PitA K16322 pit; low-affinity inorganic phosphate transporter
D HRD69_03280 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D HRD69_13865 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D HRD69_07080 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D HRD69_07095 gltP; glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein
D HRD69_06145 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D HRD69_02325 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D HRD69_05175 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HRD69_08805 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HRD69_16445 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D HRD69_03405 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D HRD69_17480 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HRD69_06775 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D HRD69_06770 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D HRD69_11035 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter
D HRD69_03815 trkH; Trk system potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein
D HRD69_07005 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HRD69_19475 uraA; uracil permease K02824 uraA; uracil permease
D HRD69_05180 uracil-xanthine permease K16345 xanP; xanthine permease XanP
D HRD69_03410 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HRD69_05530 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HRD69_19065 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein
D HRD69_12025 tyrP; tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein
D HRD69_18390 mtr; tryptophan permease K03835 mtr; tryptophan-specific transport protein
D HRD69_18265 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D HRD69_13455 anion permease K09477 citT; citrate:succinate antiporter
D HRD69_09440 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D HRD69_15625 clcB; voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D HRD69_20460 HoxN/HupN/NixA family nickel/cobalt transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D HRD69_16725 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D HRD69_19060 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D HRD69_01510 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HRD69_15735 arsenic transporter K03893 arsB; arsenical pump membrane protein
D HRD69_12920 dcuC; anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D HRD69_04300 wzxE; lipid III flippase WzxE K16693 wzxE; enterobacterial common antigen flippase
D HRD69_16665 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HRD69_19865 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D HRD69_02985 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D HRD69_03940 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D HRD69_05375 kup; low affinity potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D HRD69_00880 argO; arginine exporter ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D HRD69_04145 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D HRD69_04150 rhtC; threonine export protein RhtC K05835 rhtC; threonine efflux protein
D HRD69_08870 LysE family transporter K05835 rhtC; threonine efflux protein
D HRD69_10200 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D HRD69_10195 ygaH; L-valine transporter subunit YgaH K26606 azlD; branched chain amino acid efflux pump
D HRD69_03140 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D HRD69_09360 FUSC family protein K15547 mdtO; multidrug resistance protein MdtO
D HRD69_19455 AI-2E family transporter K03548 perM; putative permease
D HRD69_04100 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D HRD69_14775 MarC family NAAT transporter K05595 marC; multiple antibiotic resistance protein
D HRD69_09090 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HRD69_14360 mntP; manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D HRD69_13870 FTR1 family protein K07243 FTR; high-affinity iron transporter
D HRD69_17030 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D HRD69_13875 iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D HRD69_13880 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D HRD69_17025 iron transporter K07230 p19; periplasmic iron binding protein
D HRD69_20000 nickel/cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D HRD69_04685 energy transducer TonB K03832 tonB; periplasmic protein TonB
D HRD69_07135 energy transducer TonB K03832 tonB; periplasmic protein TonB
D HRD69_15125 tonB; TonB system transport protein TonB K03832 tonB; periplasmic protein TonB
D HRD69_11660 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D HRD69_11650 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D HRD69_11655 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D HRD69_12195 thioredoxin family protein K08344 scsB; suppressor for copper-sensitivity B
D HRD69_18945 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HRD69_18950 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HRD69_18955 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D HRD69_18375 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D HRD69_18380 torA; trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D HRD69_00620 molybdopterin-dependent oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D HRD69_10185 emrA; multidrug efflux MFS transporter periplasmic adaptor subunit EmrA K03543 emrA; membrane fusion protein, multidrug efflux system
D HRD69_09355 mdtN; multidrug transporter subunit MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system
D HRD69_04690 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D HRD69_01725 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HRD69_15500 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system
D HRD69_12110 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D HRD69_02605 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D HRD69_06390 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D HRD69_17275 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D HRD69_10780 acrA; efflux RND transporter adaptor subunit AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D HRD69_11760 multidrug efflux pump-associated protein, AcrZ family K25859 acrZ; accessory protein, multidrug efflux pump
D HRD69_19575 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D HRD69_09730 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D HRD69_18105 macA; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D HRD69_19175 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D HRD69_03145 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D HRD69_11700 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D HRD69_06505 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A
D HRD69_06500 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B
D HRD69_06495 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C
D HRD69_06225 uspB; universal stress protein UspB K06144 uspB; universal stress protein B
D HRD69_18755 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D HRD69_13540 MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D HRD69_15980 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D HRD69_14450 copD; copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D HRD69_14445 yobA; CopC domain-containing protein YobA K07156 copC; copper resistance protein C
D HRD69_14910 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ymo02044]
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_15495 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D HRD69_15505 type I secretion system permease/ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D HRD69_15500 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system
D HRD69_04695 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HRD69_04690 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D HRD69_12105 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HRD69_12110 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D HRD69_12100 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D HRD69_02605 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D HRD69_06390 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D HRD69_17275 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D HRD69_02610 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_06395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_17280 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HRD69_07230 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C
D HRD69_07225 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D HRD69_02745 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HRD69_07220 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HRD69_07215 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D HRD69_07210 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D HRD69_07205 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D HRD69_07200 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D HRD69_07195 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D HRD69_07190 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D HRD69_07185 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D HRD69_07180 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D HRD69_00675 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_07175 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D HRD69_07170 gspS; type II secretion system pilot lipoprotein GspS K02465 gspS; general secretion pathway protein S
D HRD69_02765 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HRD69_19900 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D HRD69_00985 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HRD69_01745 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HRD69_01750 tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D HRD69_01755 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D HRD69_01760 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HRD69_01765 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HRD69_01770 type II secretion system F family protein K12510 tadB; tight adherence protein B
D HRD69_01775 type II secretion system F family protein K12511 tadC; tight adherence protein C
D HRD69_01780 tight adherance operon protein K12512 tadD; tight adherence protein D
D HRD69_01785 pilus assembly protein K12513 tadE; tight adherence protein E
D HRD69_01790 pseudopilin K12514 tadF; tight adherence protein F
D HRD69_01795 TadE/TadG family protein K12515 tadG; tight adherence protein G
D HRD69_00570 prepilin peptidase-dependent protein K02679 ppdA; prepilin peptidase dependent protein A
D HRD69_00565 prepilin peptidase-dependent protein K02680 ppdB; prepilin peptidase dependent protein B
D HRD69_00555 peptidase K02681 ppdC; prepilin peptidase dependent protein C
D HRD69_09180 ppdD; prepilin peptidase-dependent pilin K02682 ppdD; prepilin peptidase dependent protein D
D HRD69_09175 gspE; type II secretion system protein GspE K02504 hofB; protein transport protein HofB
D HRD69_09170 hofC; protein transport protein HofC K02505 hofC; protein transport protein HofC
D HRD69_06570 pilM; pilus assembly protein PilM K12288 hofM; pilus assembly protein HofM
D HRD69_06575 PilN domain-containing protein K12289 hofN; pilus assembly protein HofN
D HRD69_06580 pilus assembly protein PilO K12290 hofO; pilus assembly protein HofO
D HRD69_06585 pilus assembly protein PilP K12291 hofP; pilus assembly protein HofP
D HRD69_06590 hofQ; DNA uptake porin HofQ K02507 hofQ; protein transport protein HofQ
D HRD69_01000 YggT family protein K02221 yggT; YggT family protein
D HRD69_10650 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D HRD69_17975 ComEC family protein K02238 comEC; competence protein ComEC
D HRD69_07315 type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D HRD69_07365 FliM/FliN family flagellar motor switch protein K03225 yscQ; type III secretion protein Q
D HRD69_07340 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V
D HRD69_07330 sctC; type III secretion system outer membrane ring subunit SctC K22504 invG; type III secretion system outer membrane ring protein
D HRD69_07305 sctJ; type III secretion inner membrane ring lipoprotein SctJ K22505 prgK; type III secretion system inner membrane ring protein
D HRD69_07350 FliI/YscN family ATPase K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D HRD69_07335 sctW; type III secretion system gatekeeper subunit SctW K22511 invE; type III secretion system protein
D HRD69_07345 type III secretion system protein K22512 spaK; type III secretion system chaperone
D HRD69_07320 hypothetical protein K22488 prgH; type III secretion system protein
D HRD69_07310 sctI; type III secretion system inner rod subunit SctI K22487 prgJ; type III secretion system protein
D HRD69_02100 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_13620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_02095 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_13615 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_02065 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_13770 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_02055 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_13760 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_02050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_13755 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_02025 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_13730 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_02020 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_13725 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_02015 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_13720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_02010 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_13715 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_02005 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_13710 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_00755 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HRD69_01515 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_02305 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_11170 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_15195 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D HRD69_01415 autotransporter domain-containing esterase K12686 apeE; outer membrane lipase/esterase
D HRD69_01185 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
D HRD69_02640 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D HRD69_17615 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
D HRD69_19740 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D HRD69_01245 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_02645 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_17710 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D HRD69_19745 tssL; type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK
D HRD69_01250 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D HRD69_02650 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D HRD69_17715 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D HRD69_19750 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D HRD69_01170 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D HRD69_02680 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D HRD69_17600 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D HRD69_19805 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D HRD69_02685 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D HRD69_17605 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D HRD69_19800 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D HRD69_02690 GPW/gp25 family protein K11897 impF; type VI secretion system protein ImpF
D HRD69_19715 type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D HRD69_01255 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D HRD69_02700 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D HRD69_17720 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D HRD69_19765 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D HRD69_01260 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D HRD69_02695 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D HRD69_17725 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D HRD69_19770 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D HRD69_02660 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D HRD69_19810 ImpA family type VI secretion system protein K11902 impA; type VI secretion system protein ImpA
D HRD69_01235 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_02705 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_17700 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_19760 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D HRD69_01215 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_02675 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_17675 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D HRD69_01160 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein
D HRD69_17590 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein
D HRD69_01165 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_17595 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_19755 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D HRD69_01230 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D HRD69_17695 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D HRD69_19795 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D HRD69_01180 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ
D HRD69_17610 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ
D HRD69_01155 type VI secretion system ImpA family N-terminal domain-containing protein K11911 vasL; type VI secretion system protein VasL
D HRD69_02635 type VI secretion system ImpA family N-terminal domain-containing protein K11911 vasL; type VI secretion system protein VasL
D HRD69_17580 type VI secretion system ImpA family N-terminal domain-containing protein K11911 vasL; type VI secretion system protein VasL
D HRD69_19720 ImpE family T6SS protein Cts1E K11898 impE; type VI secretion system protein ImpE
D HRD69_02520 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_04405 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_06255 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_13365 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_15380 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_19790 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_02510 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_04410 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_06260 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_14580 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_02505 fimbrial biogenesis usher protein K07347 fimD; outer membrane usher protein
D HRD69_04415 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_06265 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_13355 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_14575 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_15390 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19555 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19780 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_02500 type 1 fimbrial protein K07348 fimF; minor fimbrial subunit
D HRD69_14595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14590 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14570 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14585 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_09680 outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D HRD69_09685 fimbria/pilus periplasmic chaperone K12519 papD; chaperone protein PapD
D HRD69_02595 hypothetical protein K21964 ecpA; Mat/Ecp fimbriae major subunit
D HRD69_02590 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D HRD69_02585 TcfC E-set like domain-containing protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D HRD69_02580 hypothetical protein K21967 ecpD; Mat/Ecp fimbriae adhesin
D HRD69_02575 fimbria/pilus periplasmic chaperone K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D HRD69_09140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HRD69_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HRD69_10495 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HRD69_03735 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HRD69_10500 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HRD69_08020 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HRD69_09135 secM; secA regulator SecM K13301 secM; secretion monitor
D HRD69_06955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HRD69_10035 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HRD69_04060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HRD69_10490 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HRD69_05585 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HRD69_03875 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HRD69_03870 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HRD69_03865 tatC; Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D HRD69_11230 tatA; Sec-independent protein translocase subunit TatA K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:ymo02042]
D HRD69_00315 hypothetical protein K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D HRD69_02285 TDT family transporter K11041 eta; exfoliative toxin A/B
D HRD69_03195 RHS repeat protein K11021 tccC; insecticidal toxin complex protein TccC
D HRD69_07880 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HRD69_10025 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HRD69_00800 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ymo02022]
D HRD69_10425 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HRD69_10420 phoB; phosphate response regulator transcription factor PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HRD69_17170 phoQ; two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HRD69_17165 phoP; two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HRD69_06525 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HRD69_06520 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HRD69_15885 rstB; two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HRD69_15880 rstA; two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D HRD69_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HRD69_04885 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HRD69_00775 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D HRD69_00780 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D HRD69_19590 baeS; two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HRD69_19595 baeR; two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HRD69_07975 pmrB; two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D HRD69_07980 pmrA; two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D HRD69_16805 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HRD69_16800 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HRD69_14860 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HRD69_14865 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HRD69_11485 kdbD; two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HRD69_11480 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HRD69_02825 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HRD69_08735 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HRD69_19165 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HRD69_19170 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D HRD69_16935 narX; nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HRD69_15200 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HRD69_19355 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D HRD69_05080 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D HRD69_05085 uhpA; transcriptional regulator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D HRD69_13405 MASE1 domain-containing protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D HRD69_13410 response regulator transcription factor K20264 fusR; two-component system, NarL family, response regulator FusR
D HRD69_12075 rcsC; two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D HRD69_12085 rcsD; phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D HRD69_12080 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D HRD69_09480 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HRD69_13955 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HRD69_02570 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_13370 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D HRD69_02565 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D HRD69_07270 response regulator transcription factor K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D HRD69_13375 response regulator transcription factor K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D HRD69_13420 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D HRD69_13415 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D HRD69_17080 dcuS; two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D HRD69_17085 dcuR; two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR
D HRD69_06400 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HRD69_19015 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HRD69_10070 yehT; two-component system response regulator BtsR K02477 K02477; two-component system, LytTR family, response regulator
D HRD69_19020 response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D HRD69_05260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HRD69_05265 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HRD69_20080 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HRD69_20070 glrR; two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HRD69_02145 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_13575 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_02085 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_13605 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_02080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13600 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13315 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HRD69_07105 two component system sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D HRD69_07100 two component system response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D HRD69_15025 rssB; two-component system response regulator RssB K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:ymo02035]
D HRD69_02145 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_13575 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HRD69_02140 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_13580 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HRD69_02075 chemotaxis protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_13595 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HRD69_02080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_13600 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HRD69_02085 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_13605 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HRD69_02090 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HRD69_13610 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HRD69_13315 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HRD69_01655 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_05555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_11445 Tar ligand binding domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_12610 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_13935 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_18670 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D HRD69_00660 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_02175 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_07910 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_13585 Tar ligand binding domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HRD69_05830 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D HRD69_13535 Tar ligand binding domain-containing protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D HRD69_13590 Tar ligand binding domain-containing protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D HRD69_14215 PAS domain-containing protein K03776 aer; aerotaxis receptor
D HRD69_02055 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_13760 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HRD69_02050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_13755 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HRD69_02045 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D HRD69_13750 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D HRD69_02020 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_13725 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HRD69_02015 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_13720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HRD69_02010 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_13715 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HRD69_02005 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_13710 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HRD69_02100 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_13620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HRD69_02095 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_13615 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HRD69_02105 flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HRD69_13625 flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HRD69_02060 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_13765 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HRD69_02030 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_13735 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HRD69_02025 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_13730 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HRD69_02065 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_13770 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HRD69_02195 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HRD69_13685 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HRD69_02235 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HRD69_13645 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HRD69_02200 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HRD69_13680 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HRD69_02035 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HRD69_13740 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HRD69_02070 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HRD69_13775 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HRD69_02040 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HRD69_13745 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HRD69_02230 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HRD69_13650 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HRD69_02225 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HRD69_13655 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HRD69_02220 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HRD69_13660 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HRD69_02210 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HRD69_13670 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HRD69_02205 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HRD69_13675 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HRD69_02190 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HRD69_13690 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HRD69_02215 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HRD69_13665 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HRD69_02185 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HRD69_13700 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HRD69_02180 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HRD69_13705 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HRD69_02245 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HRD69_13635 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HRD69_13815 YkgJ family cysteine cluster protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D HRD69_02125 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_13810 FliC/FljB family flagellin K02406 fliC; flagellin
D HRD69_02120 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HRD69_13805 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HRD69_02115 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HRD69_13800 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HRD69_02110 flagellar protein FliT K02423 fliT; flagellar protein FliT
D HRD69_13795 fliT; flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT
D HRD69_02165 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_13555 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HRD69_02160 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_13560 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HRD69_02170 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_13820 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HRD69_02155 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_13565 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HRD69_02150 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_13570 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HRD69_13835 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HRD69_13825 fliZ; flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D HRD69_02240 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HRD69_13640 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HRD69_00985 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HRD69_02765 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HRD69_19900 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D HRD69_01745 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HRD69_01750 tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D HRD69_01755 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D HRD69_01760 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HRD69_01765 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HRD69_02520 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_04405 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_06255 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_13365 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_15380 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_19790 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HRD69_02510 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_04410 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_06260 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_14580 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HRD69_02505 fimbrial biogenesis usher protein K07347 fimD; outer membrane usher protein
D HRD69_04415 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_06265 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_13355 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_14575 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_15390 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19555 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_19780 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HRD69_02500 type 1 fimbrial protein K07348 fimF; minor fimbrial subunit
D HRD69_02515 fimbrial protein K07351 fimI; fimbrial protein
D HRD69_14595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14590 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14570 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HRD69_14585 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ymo04812]
D HRD69_03235 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HRD69_09120 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HRD69_09115 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HRD69_16480 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HRD69_16485 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HRD69_16490 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HRD69_01285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ymo04147]
D HRD69_10835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HRD69_09500 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HRD69_14930 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HRD69_00895 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HRD69_16285 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_16555 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HRD69_06680 ppiA; peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HRD69_10465 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D HRD69_07630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HRD69_08790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HRD69_03540 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HRD69_19850 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HRD69_03740 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_06835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HRD69_17250 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HRD69_15545 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D HRD69_09025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_16500 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HRD69_10840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HRD69_10815 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HRD69_04730 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HRD69_13305 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HRD69_18285 PLP-dependent transferase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HRD69_15725 amidinotransferase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D HRD69_07915 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HRD69_11730 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HRD69_06405 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HRD69_09940 FGGY-family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HRD69_04770 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HRD69_05255 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HRD69_03855 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HRD69_15815 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HRD69_00860 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HRD69_03615 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HRD69_04670 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_09225 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HRD69_16545 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HRD69_04860 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HRD69_11715 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HRD69_07660 blc; outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ymo02048]
D HRD69_06610 dam; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HRD69_10460 Hok/Gef family protein K18921 hokB; protein HokB
D HRD69_18725 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D HRD69_04495 type II toxin-antitoxin system ChpB family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D HRD69_04500 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18842 chpS; antitoxin ChpS
D HRD69_19565 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HRD69_19570 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D HRD69_08445 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRD69_19610 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRD69_18985 hypothetical protein K18843 hicB; antitoxin HicB
D HRD69_10725 expression modulating protein YmoA K05839 hha; haemolysin expression modulating protein
D HRD69_10730 tomB; Hha toxicity modulator TomB K19162 tomB; hha toxicity modulator TomB
D HRD69_16065 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D HRD69_16070 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D HRD69_12215 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D HRD69_12210 type II toxin-antitoxin system Phd/YefM family antitoxin K19165 phd; antitoxin Phd
D HRD69_14925 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D HRD69_07130 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D HRD69_14920 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HRD69_07125 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
D HRD69_05820 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D HRD69_05815 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D HRD69_08250 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA
D HRD69_11925 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA
D HRD69_17400 bssS; biofilm formation regulator BssS K12148 bssS; biofilm regulator BssS
D HRD69_09120 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HRD69_03235 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HRD69_01850 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HRD69_01870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HRD69_19100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HRD69_20375 toxin K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D HRD69_01365 hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D HRD69_20380 type IV toxin-antitoxin system YeeU family antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D HRD69_01370 type IV toxin-antitoxin system YeeU family antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D HRD69_00785 hypothetical protein K19168 cptA; toxin CptA
D HRD69_00790 sdhE; FAD assembly factor SdhE K09159 cptB; antitoxin CptB
D HRD69_19980 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ymo01504]
D HRD69_15950 aac(6'); aminoglycoside 6'-N-acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D HRD69_08345 3'-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D HRD69_05905 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D HRD69_18885 SmvA family efflux MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D HRD69_16805 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HRD69_16800 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HRD69_17170 phoQ; two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HRD69_17165 phoP; two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HRD69_10780 acrA; efflux RND transporter adaptor subunit AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D HRD69_10775 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_01545 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HRD69_11070 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D HRD69_01895 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HRD69_02565 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D HRD69_17885 ompF; porin OmpF K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ymo00536]
D HRD69_00160 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
D HRD69_18915 cdiA; contact-dependent inhibition toxin CdiA K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ymo00537]
D HRD69_15815 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ymo03100]
D HRD69_03600 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_04615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_10125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_19105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_19110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HRD69_11145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_04275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_18790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_09990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_09995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_10000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HRD69_13335 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_13380 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_13470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HRD69_00170 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_04600 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_10140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HRD69_13975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HRD69_11370 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_11360 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_11375 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HRD69_00230 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_03800 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_05325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_07060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HRD69_00735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_03750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07715 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_07720 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_13970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HRD69_04270 tRNA-His K14226 tRNA-His; tRNA His
D HRD69_03605 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_04620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_10120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HRD69_08025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_11380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_13980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_04265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_08555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HRD69_11670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_19075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_13910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HRD69_00510 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_00515 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_00520 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_01990 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HRD69_08030 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_11365 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_11385 tRNA-Met K14230 tRNA-Met; tRNA Met
D HRD69_01070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HRD69_07545 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HRD69_18495 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_04260 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_05070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HRD69_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_17730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_18685 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_16710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_16715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HRD69_03765 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_03745 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_03585 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_18690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HRD69_04595 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HRD69_03760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_15000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_15010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HRD69_16275 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_16280 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19085 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19090 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_19095 tRNA-Val K14237 tRNA-Val; tRNA Val
D HRD69_05960 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HRD69_05330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_00235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_03610 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HRD69_05320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_00225 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_03595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HRD69_00220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_03590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HRD69_10720 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D HRD69_02785 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D HRD69_16345 rprA; antisense sRNA RprA K18518 rprA; small regulatory RNA RprA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HRD69_11935 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D HRD69_01830 dkgA; 2,5-didehydrogluconate reductase DkgA K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HRD69_16825 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HRD69_00205 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D HRD69_05900 SDR family oxidoreductase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D HRD69_13005 oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D HRD69_19050 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D HRD69_09585 alcohol dehydrogenase catalytic domain-containing protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D HRD69_19690 2-keto-D-gluconate dehydrogenase K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D HRD69_02255 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D HRD69_17405 solA; N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D HRD69_03450 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HRD69_08665 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HRD69_13510 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HRD69_15410 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HRD69_01855 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D HRD69_15920 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HRD69_07885 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HRD69_14935 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HRD69_15675 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HRD69_03250 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D HRD69_07240 cytochrome b/b6 domain-containing protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D HRD69_19450 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HRD69_16030 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HRD69_05095 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D HRD69_19285 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D HRD69_06340 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HRD69_14885 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HRD69_20025 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D HRD69_14440 ftnA; non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D HRD69_09310 cueO; multicopper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4]
D HRD69_04755 fpr; ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HRD69_15695 norW; NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D HRD69_15730 arsC; glutaredoxin-dependent arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HRD69_19465 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HRD69_08215 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HRD69_08980 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HRD69_18025 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HRD69_18130 hcr; NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D HRD69_12840 4Fe-4S dicluster domain-containing protein K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D HRD69_12835 hyfB; hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D HRD69_12830 respiratory chain complex I subunit 1 family protein K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D HRD69_12825 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D HRD69_12820 hyfE; hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D HRD69_12815 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D HRD69_12810 hydrogenase large subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D HRD69_12800 NADH-quinone oxidoreductase subunit B family protein K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D HRD69_12795 HycH family protein K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D HRD69_09640 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D HRD69_16260 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D HRD69_12635 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D HRD69_16990 tehB; SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D HRD69_07440 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D HRD69_08480 transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D HRD69_17470 mdoC; glucans biosynthesis protein MdoC K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D HRD69_11330 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HRD69_08120 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D HRD69_05750 N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D HRD69_08265 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D HRD69_18075 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D HRD69_10165 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D HRD69_00580 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HRD69_13105 cob(I)yrinic acid a,c-diamide adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D HRD69_10310 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HRD69_05885 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D HRD69_16355 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HRD69_01935 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HRD69_16720 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D HRD69_16375 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D HRD69_02435 hypothetical protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D HRD69_02490 hypothetical protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D HRD69_03560 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D HRD69_01705 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D HRD69_11635 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HRD69_11195 metallophosphoesterase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D HRD69_15185 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HRD69_18700 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HRD69_17895 cyclic diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D HRD69_18430 cyclic di-GMP phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D HRD69_05030 hmsP; biofilm formation regulator HmsP K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D HRD69_00950 endA; deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D HRD69_03860 tatD; 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HRD69_08610 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HRD69_17305 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HRD69_11455 ybfF; esterase K01175 ybfF; esterase [EC:3.1.-.-]
D HRD69_10340 frsA; esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-]
D HRD69_07450 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D HRD69_14100 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D HRD69_18645 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D HRD69_04365 glycoside hydrolase family 28 protein K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D HRD69_15780 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HRD69_07020 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HRD69_20405 chbG; chitin disaccharide deacetylase K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D HRD69_14420 ASCH domain-containing protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D HRD69_03000 ridA; 2-iminobutanoate/2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HRD69_01940 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D HRD69_10670 cof; HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D HRD69_19325 nudK; GDP-mannose pyrophosphatase NudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D HRD69_17370 maf; septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D HRD69_05380 ravA; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HRD69_05880 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D HRD69_15350 fsa; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D HRD69_07730 nnr; bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HRD69_00490 csdA; cysteine desulfurase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D HRD69_13900 N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D HRD69_19655 gutQ; arabinose-5-phosphate isomerase GutQ K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D HRD69_05875 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D HRD69_07920 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D HRD69_15460 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D HRD69_15470 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D HRD69_15475 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HRD69_10280 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D HRD69_10285 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D HRD69_10290 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D HRD69_10295 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D HRD69_10300 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D HRD69_10305 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D HRD69_04090 zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D HRD69_03030 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D HRD69_13545 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D HRD69_09395 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D HRD69_13140 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D HRD69_13135 glycerol dehydratase reactivase beta/small subunit family protein K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D HRD69_05840 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D HRD69_19955 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D HRD69_12050 2Fe-2S ferredoxin-like protein K11107 yfaE; ferredoxin
D HRD69_15455 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D HRD69_15450 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D HRD69_15480 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D HRD69_07590 4Fe-4S binding protein K05796 hydN; electron transport protein HydN
D HRD69_12785 4Fe-4S binding protein K05796 hydN; electron transport protein HydN
D HRD69_05405 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D HRD69_00765 fldB; flavodoxin FldB K03840 fldB; flavodoxin II
D HRD69_12805 hyfH; hydrogenase 4 subunit H K12143 hyfH; hydrogenase-4 component H
D HRD69_19975 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D HRD69_03105 cybC; cytochrome b562 K15536 cybC; soluble cytochrome b562
D HRD69_15690 norV; anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D HRD69_19345 napD; chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D HRD69_19350 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D HRD69_17515 heme lyase CcmF/NrfE family subunit K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D HRD69_17505 nrfF; heme lyase NrfEFG subunit NrfF K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D HRD69_17500 cytochrome C heme lyase K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D HRD69_11440 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D HRD69_19330 napC; cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
D HRD69_17530 nrfB; cytochrome c nitrite reductase pentaheme subunit K04013 nrfB; cytochrome c-type protein NrfB
D HRD69_17525 nrfC; cytochrome c nitrite reductase Fe-S protein K04014 nrfC; protein NrfC
D HRD69_17520 nrfD; cytochrome c nitrite reductase subunit NrfD K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
D HRD69_07800 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D HRD69_00100 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D HRD69_19140 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D HRD69_13075 eutP; EutP/PduV family microcompartment system protein K04029 eutP; ethanolamine utilization protein EutP
D HRD69_13080 pduU; propanediol utilization microcompartment protein PduU K04031 eutS; ethanolamine utilization protein EutS
D HRD69_00310 VOC family protein K08234 yaeR; glyoxylase I family protein
D HRD69_16020 mpaA; murein tripeptide amidase MpaA K14054 mpaA; murein peptide amidase A
D HRD69_00990 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HRD69_15300 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D HRD69_15305 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D HRD69_07465 bcsB; cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D HRD69_04255 hemY; protoheme IX biogenesis protein HemY K02498 hemY; HemY protein
D HRD69_03880 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D HRD69_03885 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D HRD69_01920 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D HRD69_08115 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D HRD69_05310 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D HRD69_13090 SLBB domain-containing protein K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D HRD69_01840 ftsP; cell division protein FtsP K04753 sufI; suppressor of ftsI
D HRD69_05550 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D HRD69_02260 DoxX family protein K15977 K15977; putative oxidoreductase
D HRD69_02395 DoxX family protein K15977 K15977; putative oxidoreductase
D HRD69_17440 DoxX family protein K15977 K15977; putative oxidoreductase
D HRD69_19410 ypfH; esterase K06999 K06999; phospholipase/carboxylesterase
D HRD69_10160 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HRD69_19645 gutM; transcriptional regulator GutM K02466 gutM; glucitol operon activator protein
D HRD69_03125 barstar family protein K03623 yhcO; ribonuclease inhibitor
D HRD69_00055 cold-shock protein K03704 cspA; cold shock protein
D HRD69_03310 cspA; RNA chaperone/antiterminator CspA K03704 cspA; cold shock protein
D HRD69_03315 cspG; cold shock protein CspG K03704 cspA; cold shock protein
D HRD69_11215 cspE; transcription antiterminator/RNA stability regulator CspE K03704 cspA; cold shock protein
D HRD69_13525 cspE; transcription antiterminator/RNA stability regulator CspE K03704 cspA; cold shock protein
D HRD69_14325 cspE; transcription antiterminator/RNA stability regulator CspE K03704 cspA; cold shock protein
D HRD69_17955 cold-shock protein K03704 cspA; cold shock protein
D HRD69_18095 cspD; cold shock-like protein CspD K03704 cspA; cold shock protein
D HRD69_03655 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D
D HRD69_10695 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D HRD69_06510 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D HRD69_18090 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D HRD69_10620 tig; trigger factor K03545 tig; trigger factor
D HRD69_03255 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D HRD69_05860 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D HRD69_00010 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D HRD69_00005 urease accessory protein UreF K03188 ureF; urease accessory protein
D HRD69_20475 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D HRD69_20470 urease accessory protein UreD K03190 ureD; urease accessory protein
D HRD69_20255 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D HRD69_01580 hybG; hydrogenase maturation factor HybG K04653 hypC; hydrogenase expression/formation protein HypC
D HRD69_12850 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D HRD69_01575 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D HRD69_01570 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D HRD69_01565 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D HRD69_00095 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D HRD69_04560 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D HRD69_03020 proteasome-type protease K07395 K07395; putative proteasome-type protease
D HRD69_00655 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D HRD69_06710 OsmC family protein K07397 yhfA; putative redox protein
D HRD69_06475 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D HRD69_10715 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D HRD69_00465 xni; flap endonuclease Xni K01146 xni; protein Xni
D HRD69_20355 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HRD69_01355 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HRD69_05000 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HRD69_03895 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D HRD69_20320 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D HRD69_15225 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D HRD69_18115 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D HRD69_02800 YraN family protein K07460 yraN; putative endonuclease
D HRD69_08125 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D HRD69_07025 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D HRD69_15830 sbmC; DNA gyrase inhibitor SbmC K07470 sbmC; DNA gyrase inhibitor
D HRD69_18040 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D HRD69_07035 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D HRD69_15415 recombinase family protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D HRD69_06015 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase
D HRD69_06085 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase
D HRD69_02560 IS3 family transposase K07483 K07483; transposase
C 99979 Viral proteins
C 99998 Others
D HRD69_16075 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D HRD69_16060 pspD; phage shock protein PspD K03971 pspD; phage shock protein D
D HRD69_10825 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HRD69_18785 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D HRD69_04280 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HRD69_16115 dtpA; dipeptide/tripeptide permease DtpA K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HRD69_17450 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HRD69_10435 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HRD69_05130 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D HRD69_08615 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D HRD69_03320 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D HRD69_05665 putative transporter K07085 K07085; putative transport protein
D HRD69_18240 aspartate:alanine antiporter K07085 K07085; putative transport protein
C 99978 Cell growth
D HRD69_15135 septation protein A K06190 ispZ; intracellular septation protein
D HRD69_04105 dcrB; DcrB family lipoprotein K27311 dcrB; inner membrane lipoprotein DcrB
D HRD69_07855 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling
D HRD69_14845 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D HRD69_04935 envC; murein hydrolase activator EnvC K22719 envC; murein hydrolase activator
C 99993 Cell motility
D HRD69_17240 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D HRD69_17785 TfoX/Sxy family DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D HRD69_15385 fimbria/pilus periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D HRD69_19785 fimbria/pilus periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D HRD69_00450 syd; SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D HRD69_09195 ampE; beta-lactamase regulator AmpE K03807 ampE; AmpE protein
D HRD69_14625 proQ; RNA chaperone ProQ K03607 proQ; ProP effector
D HRD69_06220 uspA; universal stress protein UspA K06149 uspA; universal stress protein A
D HRD69_13550 uspC; universal stress protein UspC K14064 uspC; universal stress protein C
D HRD69_15850 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D HRD69_03905 carbon starvation protein A K06200 cstA; carbon starvation protein
D HRD69_15360 carbon starvation protein A K06200 cstA; carbon starvation protein
D HRD69_05250 typA; ribosome-dependent GTPase TypA K06207 typA; GTP-binding protein
D HRD69_11345 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HRD69_16955 phoH; phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HRD69_14905 yeaG; protein kinase YeaG K07180 prkA; serine protein kinase
D HRD69_01945 SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D HRD69_08645 YtjB family periplasmic protein K07186 smp; membrane protein
D HRD69_10565 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D HRD69_18045 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D HRD69_16760 lolB; lipoprotein localization protein LolB K02494 lolB; outer membrane lipoprotein LolB
D HRD69_18735 mlaA; phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HRD69_04335 wzzE; ECA polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D HRD69_01635 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D HRD69_03305 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D HRD69_16165 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D HRD69_00360 skp; molecular chaperone Skp K06142 hlpA; outer membrane protein
D HRD69_09645 nlpD; murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD
D HRD69_16830 peptidoglycan DD-metalloendopeptidase family protein K12943 ygeR; lipoprotein YgeR
D HRD69_08070 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D HRD69_19205 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D HRD69_19210 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D HRD69_15150 ompW; outer membrane protein OmpW K07275 ompW; outer membrane protein
D HRD69_10060 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D HRD69_16505 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D HRD69_10610 lipoprotein K07286 yajG; uncharacterized lipoprotein
D HRD69_12915 asmA; outer membrane assembly protein AsmA K07289 asmA; AsmA protein
D HRD69_06170 AsmA family protein K07290 yhjG; AsmA family protein
D HRD69_11075 NfeD family protein K07340 ybbJ; inner membrane protein
D HRD69_02420 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D HRD69_08090 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D HRD69_12715 darC; darobactin export ABC transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D HRD69_17420 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D HRD69_15330 osmB; osmotically-inducible lipoprotein OsmB K04062 osmB; osmotically inducible lipoprotein OsmB
D HRD69_00770 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
D HRD69_18760 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D HRD69_18745 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HRD69_19895 rodZ; cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
D HRD69_03150 AaeX family protein K21695 aaeX; protein AaeX
D HRD69_02250 HdeD family acid-resistance protein K21908 hdeD; membrane protein HdeD
D HRD69_13160 pduB; propanediol utilization microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D HRD69_13130 pduJ; propanediol utilization microcompartment protein PduJ K27266 pduJ; bacterial microcompartment shell protein
D HRD69_13125 BMC domain-containing protein K27267 pduK; bacterial microcompartment shell protein
D HRD69_13115 pduM; microcompartment protein PduM K27268 pduM; bacterial microcompartment assembly protein
D HRD69_13110 EutN/CcmL family microcompartment protein K27269 pduN; bacterial microcompartment shell vertex protein
D HRD69_13085 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D HRD69_05505 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D HRD69_06840 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D HRD69_17465 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D HRD69_18530 TerC/Alx family metal homeostasis membrane protein K05794 terC; tellurite resistance protein TerC
D HRD69_07605 cutA; divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D HRD69_16650 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D HRD69_08175 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D HRD69_08895 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D HRD69_04230 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D HRD69_07420 hemin-degrading factor K07225 hmuS; putative hemin transport protein
D HRD69_07435 hutX; heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
D HRD69_10790 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HRD69_12265 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D HRD69_17835 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B
D HRD69_16670 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D HRD69_08595 osmY; molecular chaperone OsmY K04065 osmY; hyperosmotically inducible periplasmic protein
D HRD69_16700 phosphatase K04477 ycdX; putative hydrolase
D HRD69_20215 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D HRD69_09445 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D HRD69_16325 sufA; Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA
D HRD69_16320 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HRD69_16310 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HRD69_14665 metal-dependent hydrolase K07038 K07038; inner membrane protein
D HRD69_20045 phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein
D HRD69_05240 virulence factor BrkB family protein K07058 K07058; membrane protein
D HRD69_06180 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein
D HRD69_07620 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D HRD69_00495 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D HRD69_16300 sufE; cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D HRD69_17425 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D HRD69_17155 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D HRD69_06790 SlyX family protein K03745 slyX; SlyX protein
D HRD69_07030 DUF494 domain-containing protein K03747 smg; Smg protein
D HRD69_08730 creA; protein CreA K05805 creA; CreA protein
D HRD69_00945 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D HRD69_12260 dedD; cell division protein DedD K03749 dedD; DedD protein
D HRD69_06605 SPOR domain-containing protein K03112 damX; DamX protein
D HRD69_12855 sanA; outer membrane permeability protein SanA K03748 sanA; SanA protein
D HRD69_12245 DedA family protein K03975 dedA; membrane-associated protein
D HRD69_14615 yebS; membrane integrity lipid transport subunit YebS K03808 pqiA; paraquat-inducible protein A
D HRD69_17840 pqiA; membrane integrity-associated transporter subunit PqiA K03808 pqiA; paraquat-inducible protein A
D HRD69_11965 DUF883 domain-containing protein K05594 elaB; ElaB protein
D HRD69_16050 TIGR01620 family protein K08990 ycjF; putative membrane protein
D HRD69_04070 DUF1145 family protein K08993 yhhL; putative membrane protein
D HRD69_15020 YchJ family protein K09858 K09858; SEC-C motif domain protein
D HRD69_10710 YbaY family lipoprotein K09914 K09914; putative lipoprotein
D HRD69_03505 malM; maltose operon protein MalM K05775 malM; maltose operon periplasmic protein
D HRD69_03535 psiE; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
D HRD69_18815 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D HRD69_17270 xyeB; XyeB family radical SAM/SPASM peptide maturase K06871 K06871; uncharacterized protein
D HRD69_02000 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D HRD69_07810 yjfP; esterase K06889 K06889; uncharacterized protein
D HRD69_16795 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D HRD69_12395 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D HRD69_14070 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D HRD69_13990 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D HRD69_13995 phage tail protein K06906 gpU; phage tail protein
D HRD69_14020 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D HRD69_14015 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D HRD69_16055 YcjX family protein K06918 K06918; uncharacterized protein
D HRD69_17755 CoA-binding protein K06929 K06929; uncharacterized protein
D HRD69_16195 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D HRD69_18385 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D HRD69_20330 GTPase family protein K06946 K06946; uncharacterized protein
D HRD69_01335 50S ribosome-binding GTPase K06946 K06946; uncharacterized protein
D HRD69_14660 L-cystine transporter K06956 K06956; uncharacterized protein
D HRD69_15700 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D HRD69_16120 VOC family protein K06996 K06996; uncharacterized protein
D HRD69_01875 yqiA; esterase YqiA K07000 K07000; uncharacterized protein
D HRD69_17225 alpha/beta hydrolase K07000 K07000; uncharacterized protein
D HRD69_11325 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D HRD69_18490 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D HRD69_06725 hydrolase K07019 K07019; uncharacterized protein
D HRD69_08785 satP; acetate uptake transporter K07034 K07034; uncharacterized protein
D HRD69_19425 zinc metallopeptidase K07054 K07054; uncharacterized protein
D HRD69_06780 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D HRD69_12300 TIGR01777 family protein K07071 K07071; uncharacterized protein
D HRD69_12140 TSUP family transporter K07090 K07090; uncharacterized protein
D HRD69_12310 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D HRD69_05685 metallophosphoesterase K07098 K07098; uncharacterized protein
D HRD69_07870 YtfJ family protein K07109 K07109; uncharacterized protein
D HRD69_00930 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D HRD69_00935 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D HRD69_07115 yedE; selenium metabolism membrane protein YedE/FdhT K07112 K07112; uncharacterized protein
D HRD69_02795 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D HRD69_16625 MAPEG family protein K07136 K07136; uncharacterized protein
D HRD69_02830 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D HRD69_17855 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D HRD69_12750 DUF418 family protein K07148 K07148; uncharacterized protein
D HRD69_14795 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D HRD69_05590 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D HRD69_01005 YggU family protein K09131 K09131; uncharacterized protein
D HRD69_11245 YbeD family protein K09158 K09158; uncharacterized protein
D HRD69_16465 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D HRD69_11815 YfbU family protein K09161 K09161; uncharacterized protein
D HRD69_19315 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D HRD69_15120 YciI family protein K09780 K09780; uncharacterized protein
D HRD69_14900 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D HRD69_10810 DUF454 family protein K09790 K09790; uncharacterized protein
D HRD69_17950 hypothetical protein K09791 K09791; uncharacterized protein
D HRD69_04940 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D HRD69_20245 RnfH family protein K09801 K09801; uncharacterized protein
D HRD69_13030 DUF496 family protein K09802 K09802; uncharacterized protein
D HRD69_00875 oxidative stress defense protein K09807 K09807; uncharacterized protein
D HRD69_18110 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D HRD69_10315 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D HRD69_17830 pqiC; membrane integrity-associated transporter subunit PqiC K09857 K09857; uncharacterized protein
D HRD69_08760 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D HRD69_09150 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D HRD69_03635 YjaG family protein K09891 K09891; uncharacterized protein
D HRD69_05275 yihI; Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein
D HRD69_00840 YecA family protein K09895 K09895; uncharacterized protein
D HRD69_05300 YihD family protein K09896 K09896; uncharacterized protein
D HRD69_04565 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D HRD69_06720 YheU family protein K09898 K09898; uncharacterized protein
D HRD69_11810 DUF412 domain-containing protein K09899 K09899; uncharacterized protein
D HRD69_15090 YciU family protein K09901 K09901; uncharacterized protein
D HRD69_16475 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D HRD69_18485 YejL family protein K09904 K09904; uncharacterized protein
D HRD69_16655 VOC family protein K09907 K09907; uncharacterized protein
D HRD69_02875 DUF1043 family protein K09908 K09908; uncharacterized protein
D HRD69_17760 DUF2057 family protein K09909 K09909; uncharacterized protein
D HRD69_09245 YacL family protein K09910 K09910; uncharacterized protein
D HRD69_17800 matP; macrodomain Ter protein MatP K09911 K09911; uncharacterized protein
D HRD69_13325 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D HRD69_16675 YceH family protein K09915 K09915; uncharacterized protein
D HRD69_14940 DUF1315 family protein K09916 K09916; uncharacterized protein
D HRD69_14405 YoaH family protein K09917 K09917; uncharacterized protein
D HRD69_01885 DUF1249 family protein K09920 K09920; uncharacterized protein
D HRD69_04215 DUF484 domain-containing protein K09921 K09921; uncharacterized protein
D HRD69_01040 YggL family protein K09923 K09923; uncharacterized protein
D HRD69_02265 putative DNA-binding domain-containing protein K09929 K09929; uncharacterized protein
D HRD69_02270 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D HRD69_07775 DUF2065 family protein K09937 K09937; uncharacterized protein
D HRD69_19600 YegP family protein K09946 K09946; uncharacterized protein
D HRD69_19125 DUF3820 family protein K09954 K09954; uncharacterized protein
D HRD69_19115 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D HRD69_09855 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein
D HRD69_11060 TraB/GumN family protein K09973 K09973; uncharacterized protein
D HRD69_16860 HutD family protein K09975 K09975; uncharacterized protein
D HRD69_15955 YdbL family protein K09978 K09978; uncharacterized protein
D HRD69_08145 YhbP family protein K09979 K09979; uncharacterized protein
D HRD69_15115 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024