+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Yersinia pseudotuberculosis IP 32953 (serotype 1)

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ACRISPR-Cas system B Universal Cas proteins C BZ17_4127 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 B Type I CRISPR-Cas system C Type I signiture cas proteins D BZ17_4128 cas3f; CRISPR-associated helicase Cas3, subtype I-F/YPEST K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors D BZ17_4129 csy1; CRISPR type I-F/YPEST-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D BZ17_4130 csy2; CRISPR type I-F/YPEST-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D BZ17_4131 csy3; CRISPR type I-F/YPEST-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D BZ17_4132 cas6f; CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C BZ17_2024 hsdR; type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C BZ17_2702 hsdR; type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C BZ17_2023 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C BZ17_2700 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C BZ17_2022 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C BZ17_2699 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D BZ17_613 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D BZ17_2839 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D BZ17_686 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C BZ17_2707 restriction endonuclease family protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR D BZ17_2980 toxin SymE, type I toxin-antitoxin system family protein K19048 symE; toxic protein SymE C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D BZ17_3491 plasmid stabilization system family protein K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ D BZ17_2999 relB antitoxin family protein K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D BZ17_4293 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D BZ17_4292 yefM; antitoxin YefM K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB D BZ17_3941 hypothetical protein K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB D BZ17_1569 hha; hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein D BZ17_1568 biofilm formation regulator YbaJ family protein K19162 tomB; hha toxicity modulator TomB C PspC-PspB D BZ17_193 pspC; phage shock protein C K03973 pspC; phage shock protein C D BZ17_192 pspB; phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA C ParE-ParD D BZ17_4208 plasmid stabilization system family protein K19092 parE1_3_4; toxin ParE1/3/4 D BZ17_4207 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D BZ17_794 death-on-curing family protein K07341 doc; death on curing protein C HigB-HigA C MqsR-MqsA D BZ17_3493 mqsR; mRNA interferase MqsR K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin D BZ17_3494 mqsA; antitoxin MqsA K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D BZ17_2037 hypothetical protein K19334 tabA; biofilm protein TabA D BZ17_4065 yhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA D BZ17_4153 bssS family protein K12148 bssS; biofilm regulator BssS D BZ17_1862 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BZ17_3036 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D BZ17_3217 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BZ17_3214 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BZ17_3926 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D BZ17_2715 putative toxin YpjF K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D BZ17_2714 putative structural protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D BZ17_3438 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C BZ17_397 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C BZ17_3772 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023