+D GENES KO
#
KEGG Orthology (KO) - Yersinia pestis PBM19
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ypw00010]
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CH59_1630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_2525 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CH59_2183 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CH59_944 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_1908 ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_2179 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CH59_3966 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CH59_943 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CH59_713 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_1406 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_2158 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CH59_4059 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_4225 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_4243 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CH59_2629 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CH59_2630 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_4164 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_711 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CH59_2121 HAD hydrolase, IA, variant 3 family protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_3967 aldose 1-epimerase family protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D CH59_2230 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CH59_2261 hypothetical protein K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CH59_588 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CH59_3074 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CH59_228 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ypw00020]
D CH59_744 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CH59_3899 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CH59_2633 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CH59_196 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CH59_739 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_735 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CH59_736 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CH59_741 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_740 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_743 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CH59_742 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CH59_1502 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_1503 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_1504 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D CH59_1505 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D CH59_2714 fumA; fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CH59_3853 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CH59_2529 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CH59_2230 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CH59_2629 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CH59_2630 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CH59_4164 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ypw00030]
D CH59_1630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CH59_4057 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CH59_697 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CH59_297 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CH59_2247 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CH59_2735 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CH59_2736 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CH59_940 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CH59_1396 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CH59_551 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CH59_949 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CH59_2696 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CH59_2377 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CH59_520 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CH59_1426 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CH59_2376 phosphomethylpyrimidine kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D CH59_2098 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CH59_1423 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_2582 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D CH59_4112 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CH59_68 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D CH59_4055 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CH59_2035 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CH59_75 carbohydrate kinase, thermoresistant glucokinase family protein K00851 idnK; gluconokinase [EC:2.7.1.12]
D CH59_1901 carbohydrate kinase, thermoresistant glucokinase family protein K00851 idnK; gluconokinase [EC:2.7.1.12]
D CH59_1938 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CH59_944 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_1908 ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_2525 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CH59_2183 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ypw00040]
D CH59_1439 pemA; pectinesterase A K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CH59_1943 pelY; periplasmic pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D CH59_111 periplasmic pectate lyase family protein K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D CH59_121 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D CH59_108 cupin domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D CH59_109 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D CH59_110 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D CH59_1028 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D CH59_1285 glucuronate isomerase family protein K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CH59_1284 mannitol dehydrogenase Rossmann domain protein K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D CH59_1283 hypothetical protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D CH59_560 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D CH59_561 mannitol dehydrogenase Rossmann domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D CH59_3946 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CH59_298 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_299 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_2715 lyx; L-xylulose/3-keto-L-gulonate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D CH59_2716 xylose isomerase-like TIM barrel family protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CH59_2723 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CH59_3890 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CH59_2247 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CH59_3868 L-arabinose isomerase family protein K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CH59_3867 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D CH59_552 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CH59_1992 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CH59_1991 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CH59_1535 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CH59_1537 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CH59_3777 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D CH59_1909 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D CH59_2392 fGGY; FGGY carbohydrate kinase domain-containing protein K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ypw00051]
D CH59_2814 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CH59_3854 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CH59_2968 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_19 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_2966 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CH59_2963 NAD dependent epimerase/dehydratase family protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_2962 rmlD substrate binding domain protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_253 methylaspartate ammonia-lyase family protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D CH59_251 short chain dehydrogenase family protein K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D CH59_252 fumarylacetoacetate (FAA) hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D CH59_1536 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D CH59_1535 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CH59_1537 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_2525 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CH59_2183 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CH59_2025 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D CH59_545 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CH59_1991 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CH59_3777 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D CH59_944 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_1908 ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_2179 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CH59_2696 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CH59_544 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CH59_3409 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CH59_3410 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D CH59_3411 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D CH59_2026 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CH59_95 HAD hydrolase, IA, variant 3 family protein K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D CH59_4278 yniC; phosphatase YniC K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:ypw00052]
D CH59_711 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CH59_709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CH59_708 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CH59_707 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CH59_298 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_299 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CH59_183 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CH59_1014 beta-galactosidase family protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CH59_270 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_1023 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CH59_1035 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D CH59_2861 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CH59_1018 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CH59_1030 PTS system fructose IIA component family protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CH59_1033 PTS system, mannose/fructose/sorbose, IIB component family protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CH59_1032 PTS system sorbose-specific iic component family protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CH59_1031 PTS system mannose/fructose/sorbose IID component family protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CH59_1029 nagA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CH59_1034 sugar isomerase, AgaS family protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:ypw00053]
D CH59_3946 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CH59_105 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CH59_106 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CH59_3669 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D CH59_2716 xylose isomerase-like TIM barrel family protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CH59_2723 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CH59_3890 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CH59_2715 lyx; L-xylulose/3-keto-L-gulonate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:ypw00500]
D CH59_2861 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CH59_1018 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CH59_298 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_299 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_3685 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_1249 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_3560 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CH59_3558 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CH59_3559 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CH59_2261 hypothetical protein K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CH59_588 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CH59_2950 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CH59_1887 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CH59_1886 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CH59_1889 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CH59_1885 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CH59_2217 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CH59_1888 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D CH59_2036 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CH59_2218 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CH59_3074 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CH59_2453 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CH59_2452 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CH59_1630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CH59_2814 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ypw00520]
D CH59_221 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CH59_3512 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CH59_3074 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CH59_3505 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CH59_208 glucokinase family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D CH59_3503 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CH59_3504 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CH59_2814 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CH59_2075 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CH59_2545 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CH59_2076 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CH59_3148 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CH59_4201 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CH59_2478 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CH59_1688 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CH59_3049 nanK; N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D CH59_3047 N-acetylmannosamine-6-phosphate epimerase family protein K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CH59_3046 dihydrodipicolinate synthetase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D CH59_1807 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CH59_1806 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CH59_4254 3-beta hydroxysteroid dehydrogenase/isomerase family protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D CH59_4256 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D CH59_4255 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D CH59_4253 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D CH59_228 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_298 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_299 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_3946 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CH59_709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CH59_708 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CH59_707 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CH59_3409 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CH59_3410 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D CH59_3411 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D CH59_1630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CH59_3854 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CH59_2968 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_19 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_2966 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CH59_2963 NAD dependent epimerase/dehydratase family protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_2962 rmlD substrate binding domain protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_2950 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CH59_2951 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CH59_2952 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D CH59_2949 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CH59_2953 rmlD substrate binding domain protein K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D CH59_1887 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ypw00620]
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_4164 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CH59_2629 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CH59_2630 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_458 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_98 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CH59_99 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CH59_4059 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_4225 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_799 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CH59_2414 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CH59_2413 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CH59_3655 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CH59_395 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CH59_255 lldD; L-lactate dehydrogenase cytochrome K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D CH59_484 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CH59_3773 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CH59_666 FAD binding domain protein K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D CH59_4210 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CH59_774 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CH59_431 beta-lactamase superfamily domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CH59_2035 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CH59_327 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CH59_3036 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CH59_2529 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CH59_2714 fumA; fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CH59_3853 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CH59_1502 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_1503 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_1504 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D CH59_1505 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D CH59_1875 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CH59_2230 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CH59_4243 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CH59_1639 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D CH59_1328 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ypw00630]
D CH59_1638 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_1639 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D CH59_2529 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CH59_744 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CH59_3899 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CH59_2633 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CH59_637 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D CH59_2035 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CH59_2248 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_3166 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CH59_959 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CH59_957 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_958 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CH59_1928 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CH59_33 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CH59_4055 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CH59_2013 fdnG; formate dehydrogenase-N alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CH59_2014 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CH59_2012 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CH59_2011 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CH59_3950 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CH59_4159 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ypw00640]
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_98 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CH59_99 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_458 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CH59_2418 putative quinone oxidoreductase YhdH K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_799 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CH59_2414 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CH59_2413 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CH59_3655 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CH59_3228 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CH59_736 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CH59_735 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CH59_3448 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CH59_2633 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CH59_400 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CH59_1187 yqhD; alcohol dehydrogenase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ypw00650]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_2061 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CH59_33 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CH59_741 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_740 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_743 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CH59_742 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CH59_1502 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_1503 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_1504 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D CH59_1505 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D CH59_3228 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CH59_553 gabD; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2443 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_458 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CH59_4164 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CH59_382 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CH59_1842 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3806 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_1323 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3805 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1322 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1841 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ypw00660]
D CH59_1842 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3806 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_1323 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3805 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1322 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1841 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CH59_3722 hypothetical protein K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D CH59_736 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CH59_735 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CH59_3723 maoC like domain protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D CH59_3724 hpcH/HpaI aldolase/citrate lyase family protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D CH59_2176 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CH59_1330 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CH59_1331 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CH59_1329 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ypw00562]
D CH59_3173 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CH59_189 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D CH59_3450 oxidoreductase, NAD-binding Rossmann fold family protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CH59_3451 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CH59_3458 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D CH59_3449 iolD; 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D CH59_3459 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D CH59_3457 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D CH59_3448 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CH59_2179 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ypw00190]
D CH59_90 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CH59_89 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CH59_88 nuoD; NADH dehydrogenase (quinone), D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D CH59_87 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CH59_86 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CH59_85 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CH59_84 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CH59_83 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CH59_82 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CH59_81 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CH59_80 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CH59_79 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CH59_78 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CH59_219 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CH59_741 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_740 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_743 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CH59_742 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CH59_1502 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_1503 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_1504 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D CH59_1505 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D CH59_2891 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CH59_2892 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CH59_2893 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CH59_2894 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D CH59_2895 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CH59_734 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CH59_733 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CH59_732 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D CH59_2080 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CH59_2078 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CH59_2079 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CH59_2081 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CH59_2077 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CH59_2084 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CH59_2082 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CH59_2083 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CH59_2524 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CH59_3235 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ypw00680]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_337 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D CH59_2013 fdnG; formate dehydrogenase-N alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CH59_2014 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CH59_2012 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CH59_2011 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CH59_1521 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CH59_3166 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CH59_1875 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CH59_2529 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CH59_944 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_1908 ketose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CH59_2525 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CH59_2183 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_2 fae; formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D CH59_98 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CH59_99 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_4243 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CH59_713 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_1406 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_2158 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CH59_555 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_950 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_452 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CH59_1420 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ypw00910]
D CH59_3032 napA; periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D CH59_3033 nitrate reductase cytochrome c-type subunit family protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D CH59_2253 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D CH59_2252 nirD; nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D CH59_482 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CH59_1920 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_2490 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CH59_2489 glutamate synthase, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CH59_2641 can; carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CH59_1043 Tat (twin-arginine translocation) pathway signal sequence domain protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ypw00920]
D CH59_3053 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D CH59_2173 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CH59_3054 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CH59_3055 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CH59_3056 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CH59_2274 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D CH59_2276 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D CH59_2275 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CH59_2277 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D CH59_2379 putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CH59_2381 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D CH59_2382 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CH59_2380 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D CH59_2378 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CH59_2684 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CH59_2683 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CH59_2685 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CH59_2516 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CH59_2677 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CH59_2675 sulfite reductase [NADPH] flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D CH59_2676 cysI; sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D CH59_649 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CH59_2214 glpE; thiosulfate sulfurtransferase glpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D CH59_2163 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CH59_3077 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_1970 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_2914 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_1640 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CH59_2206 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CH59_3111 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CH59_2724 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CH59_3110 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D CH59_2725 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D CH59_3109 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D CH59_2726 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ypw00061]
D CH59_799 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CH59_2414 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CH59_2413 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CH59_3655 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CH59_236 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CH59_376 pksC; polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_238 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_239 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_4152 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_4153 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_384 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_3644 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_416 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_235 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_383 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_237 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_410 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CH59_385 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_804 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_2061 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CH59_4048 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1324 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ypw00071]
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_2844 hypothetical protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D CH59_4048 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1324 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1070 acyltransferase family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ypw00561]
D CH59_1928 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CH59_2699 dak1 domain protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CH59_2700 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CH59_2184 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CH59_2737 hypothetical protein K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CH59_1552 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D CH59_240 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CH59_1217 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CH59_1192 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CH59_1551 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CH59_270 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ypw00564]
D CH59_2162 ketopantoate reductase PanE/ApbA family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CH59_1884 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CH59_1761 glpA; glycerol-3-phosphate dehydrogenase, anaerobic, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CH59_1760 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D CH59_1759 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D CH59_1552 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D CH59_1217 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CH59_1192 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CH59_1551 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CH59_1769 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CH59_1765 prolyl oligopeptidase family protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D CH59_1727 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CH59_1762 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CH59_1070 acyltransferase family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D CH59_1935 CDP-diacylglycerol pyrophosphatase family protein K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D CH59_809 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CH59_3255 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CH59_2790 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CH59_1499 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CH59_3299 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CH59_2881 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D CH59_3897 PAP2 superfamily protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D CH59_3149 haloacid dehalogenase-like hydrolase family protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D CH59_3931 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ypw00565]
D CH59_1769 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ypw00600]
D CH59_4147 glycosyl transferase 21 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D CH59_183 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CH59_270 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CH59_3512 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D CH59_1769 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CH59_1769 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ypw00592]
D CH59_1769 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ypw01040]
D CH59_2986 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CH59_2925 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CH59_3923 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ypw00230]
D CH59_1200 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CH59_2236 nudE; ADP compounds hydrolase nudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D CH59_1423 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_4112 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CH59_3659 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CH59_1653 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CH59_3242 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CH59_3392 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CH59_3152 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CH59_3243 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CH59_2989 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CH59_2990 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CH59_3008 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CH59_201 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CH59_1652 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CH59_1971 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CH59_2942 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CH59_2974 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2973 putative protein UshA: UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2691 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CH59_3501 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CH59_2233 HAD hydrolase, IA, variant 3 family protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D CH59_2970 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D CH59_673 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CH59_1422 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CH59_2816 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CH59_2781 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CH59_2640 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CH59_3201 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CH59_3189 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CH59_1409 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D CH59_921 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CH59_2826 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CH59_3202 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CH59_2620 guaC; guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D CH59_2134 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CH59_3528 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_630 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_631 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CH59_3527 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CH59_2593 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CH59_2665 dgt; dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CH59_93 HD domain protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D CH59_2132 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CH59_3234 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CH59_2668 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D CH59_1783 adenylate cyclase, class-I family protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D CH59_665 cyaB; adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CH59_3578 cAMP phosphodiesterases class-II family protein K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D CH59_1483 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CH59_3813 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CH59_828 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D CH59_2515 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CH59_2947 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CH59_2669 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CH59_1198 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CH59_1371 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D CH59_2685 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CH59_2684 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CH59_2683 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CH59_3523 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D CH59_2849 amidase, hydantoinase/carbamoylase family protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CH59_2809 aminotransferase class-V family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D CH59_3547 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CH59_3546 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CH59_3545 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CH59_2802 amidohydrolase, AtzE family protein K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
C 00240 Pyrimidine metabolism [PATH:ypw00240]
D CH59_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CH59_1379 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CH59_2460 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CH59_2459 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CH59_275 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CH59_425 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CH59_2139 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CH59_3893 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CH59_813 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CH59_3189 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CH59_2669 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CH59_2423 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CH59_1277 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D CH59_2670 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CH59_450 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CH59_3956 nudG; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D CH59_314 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CH59_2974 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2973 putative protein UshA: UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2691 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CH59_3501 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CH59_3804 noncanonical pyrimidine nucleotidase, YjjG family K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D CH59_1721 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CH59_2816 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CH59_3244 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CH59_2515 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CH59_828 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D CH59_326 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CH59_2254 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CH59_2593 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CH59_313 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CH59_3528 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_630 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_631 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CH59_3527 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CH59_93 HD domain protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D CH59_231 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CH59_2141 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CH59_1424 glycosyl transferase family, a/b domain protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D CH59_1425 glycosyl transferase family, a/b domain protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D CH59_3944 thymidine kinase family protein K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CH59_1079 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ypw00250]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_3595 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CH59_455 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CH59_3962 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CH59_2090 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CH59_3500 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CH59_92 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CH59_1517 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CH59_256 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CH59_1871 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CH59_1483 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CH59_201 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CH59_2460 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CH59_2459 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CH59_3228 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CH59_553 gabD; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2443 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2490 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CH59_2489 glutamate synthase, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CH59_1920 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CH59_3315 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CH59_1379 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CH59_916 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_3735 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_2075 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CH59_3659 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ypw00260]
D CH59_1631 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CH59_1401 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CH59_2208 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D CH59_1896 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CH59_1400 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CH59_1399 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CH59_485 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CH59_3166 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CH59_2035 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CH59_1928 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CH59_713 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_1406 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_2158 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CH59_555 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_950 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_452 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CH59_1420 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CH59_2153 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CH59_2154 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D CH59_959 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CH59_957 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_958 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CH59_2790 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CH59_679 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D CH59_678 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CH59_3396 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CH59_2045 pyridoxal-phosphate dependent enzyme family protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CH59_1838 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CH59_3645 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CH59_151 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D CH59_3916 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CH59_3915 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CH59_309 beta-eliminating lyase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ypw00270]
D CH59_2163 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CH59_3077 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_1970 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_2914 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CH59_1184 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_1583 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_3062 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_1634 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CH59_1723 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CH59_935 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CH59_2636 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CH59_2637 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CH59_4288 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CH59_878 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CH59_2664 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CH59_2781 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CH59_132 yebR; protein yebR K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CH59_2753 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CH59_1631 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CH59_1401 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CH59_2208 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D CH59_1896 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CH59_1640 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CH59_2206 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CH59_1840 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CH59_2752 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CH59_931 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_649 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CH59_3645 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CH59_151 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D CH59_3321 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D CH59_2529 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CH59_3396 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CH59_3057 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CH59_555 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_950 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_452 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ypw00280]
D CH59_1840 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3448 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CH59_382 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ypw00290]
D CH59_2045 pyridoxal-phosphate dependent enzyme family protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CH59_1838 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CH59_1330 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CH59_1331 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CH59_1329 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CH59_1842 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3806 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_1323 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3805 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1322 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1841 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CH59_1830 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CH59_1839 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CH59_1840 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CH59_2038 aminotransferase class I and II family protein K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D CH59_92 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CH59_1328 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ypw00300]
D CH59_1631 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CH59_1401 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CH59_2208 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D CH59_1896 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CH59_3005 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CH59_1380 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CH59_818 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CH59_2265 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CH59_3014 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CH59_1780 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CH59_1068 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CH59_3732 aminotransferase class I and II family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CH59_1314 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CH59_1313 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ypw00310]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_3645 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CH59_151 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D CH59_553 gabD; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2443 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_443 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D CH59_4241 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:ypw00220]
D CH59_2601 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CH59_256 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CH59_1871 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CH59_3547 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CH59_3546 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CH59_3545 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CH59_916 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_3735 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_1378 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CH59_1379 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CH59_1920 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_92 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CH59_841 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D CH59_1872 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CH59_1873 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CH59_2265 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CH59_1874 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ypw00330]
D CH59_2254 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CH59_642 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D CH59_937 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CH59_927 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CH59_928 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CH59_905 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D CH59_2637 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CH59_2636 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CH59_3241 speG; spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CH59_3761 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D CH59_3763 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D CH59_3760 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D CH59_3762 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D CH59_3764 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D CH59_924 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CH59_3315 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CH59_2823 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CH59_2822 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CH59_3386 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ypw00340]
D CH59_289 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CH59_296 hisE; phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CH59_294 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CH59_293 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CH59_295 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CH59_292 hisB; histidine biosynthesis bifunctional protein hisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_290 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CH59_1968 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CH59_1969 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CH59_4158 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CH59_4156 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D CH59_4159 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:ypw00350]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CH59_650 beta-eliminating lyase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CH59_3398 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D CH59_3397 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D CH59_3403 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D CH59_3404 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D CH59_3402 hpcD; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D CH59_3405 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D CH59_3406 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D CH59_3401 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D CH59_3400 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D CH59_553 gabD; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2443 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ypw00360]
D CH59_650 beta-eliminating lyase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CH59_3975 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CH59_2730 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:ypw00380]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_650 beta-eliminating lyase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CH59_637 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D CH59_2730 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ypw00400]
D CH59_2769 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_716 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_4245 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_2244 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CH59_2415 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CH59_2338 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CH59_2243 aroK; shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CH59_2817 aroL; shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CH59_451 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CH59_3638 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CH59_3911 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CH59_3912 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CH59_3913 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CH59_3914 indole-3-glycerol phosphate synthase family protein K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CH59_3916 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CH59_3915 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CH59_2770 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D CH59_489 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CH59_2776 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CH59_2706 bacterial extracellular solute-binding s, 3 family protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ypw00410]
D CH59_2645 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CH59_3228 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CH59_2646 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_3448 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ypw00430]
D CH59_2864 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_2863 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_2277 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D CH59_99 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CH59_98 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ypw00440]
D CH59_2587 bacterial phosphonate metabolism family protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D CH59_2589 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D CH59_2588 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D CH59_2584 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D CH59_2583 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D CH59_2586 phnJ; protein phnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D CH59_2581 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ypw00450]
D CH59_2206 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CH59_1184 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_1583 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_3062 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_1634 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CH59_1723 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CH59_4235 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CH59_468 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CH59_2684 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CH59_2683 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CH59_3959 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CH59_2009 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CH59_316 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ypw00460]
D CH59_3685 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_1249 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_2864 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_2863 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_455 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CH59_3962 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CH59_2090 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CH59_3166 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ypw00470]
D CH59_1544 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CH59_1307 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CH59_3645 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CH59_151 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D CH59_916 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_3735 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_1856 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CH59_1311 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CH59_4172 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CH59_3321 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D CH59_1780 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CH59_1068 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CH59_496 nicotianamine synthase family protein K23120 cntL; histidine 2-aminobutanoyltransferase [EC:2.5.1.152 2.5.1.-]
D CH59_495 hypothetical protein K23122 cntM; staphylopine/pseudopaline/yersinopine synthase [EC:1.5.1.52 1.5.1.-]
D CH59_3975 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ypw00480]
D CH59_2864 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_2863 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_3583 lamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CH59_3581 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D CH59_3582 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CH59_2752 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CH59_931 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CH59_2606 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CH59_3183 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D CH59_426 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CH59_2830 pepD; Xaa-His dipeptidase family protein K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CH59_4196 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CH59_529 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CH59_1925 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CH59_196 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CH59_297 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CH59_4057 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CH59_4258 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CH59_1863 hybrid peroxiredoxin hyPrx5 K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D CH59_905 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D CH59_2637 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ypw00511]
D CH59_183 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CH59_3512 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:ypw00540]
D CH59_803 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CH59_1303 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CH59_805 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CH59_2991 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CH59_802 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CH59_444 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CH59_2470 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CH59_4104 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CH59_2469 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CH59_440 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CH59_2149 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CH59_4060 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D CH59_565 yeiU; inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D CH59_4206 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CH59_1965 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D CH59_3421 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D CH59_4252 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D CH59_2387 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D CH59_2843 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CH59_1210 rfaE1; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CH59_784 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CH59_2152 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CH59_2150 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CH59_2151 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CH59_1445 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ypw00542]
D CH59_1809 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ypw00541]
D CH59_298 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_299 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CH59_707 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CH59_3946 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CH59_1804 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CH59_1805 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CH59_1802 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D CH59_1803 wecD; TDP-D-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D CH59_2950 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CH59_2951 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CH59_2952 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D CH59_2949 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CH59_2953 rmlD substrate binding domain protein K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D CH59_3854 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CH59_2968 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_19 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CH59_2966 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CH59_2963 NAD dependent epimerase/dehydratase family protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_2962 rmlD substrate binding domain protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CH59_2076 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CH59_1807 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CH59_1806 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ypw00550]
D CH59_2478 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CH59_1688 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CH59_1308 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CH59_1311 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CH59_1314 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CH59_1307 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CH59_1313 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CH59_810 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CH59_1215 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_519 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_1312 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CH59_1309 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CH59_2494 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CH59_2237 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CH59_2655 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D CH59_3671 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CH59_3477 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CH59_1315 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CH59_523 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_3474 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_2539 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CH59_3442 transglycosylase family protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:ypw00552]
D CH59_1215 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_519 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_1809 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ypw00543]
D CH59_1809 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CH59_1798 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D CH59_1800 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D CH59_3750 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D CH59_3751 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D CH59_2163 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ypw00730]
D CH59_1662 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CH59_3213 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CH59_1664 thiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CH59_3176 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3982 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_2886 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CH59_1667 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CH59_2883 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CH59_1666 histidine biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CH59_1663 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CH59_2880 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CH59_1498 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CH59_3801 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CH59_222 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D CH59_2947 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ypw00740]
D CH59_3898 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CH59_2877 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CH59_1777 HAD hydrolase, IA, variant 1 family protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D CH59_1206 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D CH59_2878 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CH59_4221 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CH59_1386 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CH59_189 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D CH59_3397 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D CH59_1702 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D CH59_2378 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CH59_1200 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CH59_198 nudJ; phosphatase nudJ K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D CH59_3660 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ypw00750]
D CH59_4199 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CH59_4197 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CH59_942 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D CH59_3650 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D CH59_452 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CH59_1368 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CH59_3143 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CH59_1399 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ypw00760]
D CH59_3595 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CH59_720 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CH59_2624 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CH59_427 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CH59_673 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CH59_1422 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CH59_1418 nadR; trifunctional NAD biosynthesis/regulator protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D CH59_2974 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2973 putative protein UshA: UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CH59_2691 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CH59_3501 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CH59_3480 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CH59_2669 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CH59_1660 NADH pyrophosphatase zinc ribbon domain protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CH59_3161 nadE; NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CH59_2741 ygaD; protein YgaD K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CH59_3963 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CH59_207 sir2 family protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CH59_746 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CH59_1862 pyridine nucleotide-disulfide oxidoreductase family protein K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D CH59_3796 pntA; NAD(P)(+) transhydrogenase (AB-specific), alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CH59_3797 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D CH59_553 gabD; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CH59_2443 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ypw00770]
D CH59_1842 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3806 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_1323 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CH59_3805 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1322 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CH59_1841 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CH59_1830 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CH59_1839 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CH59_2647 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CH59_2888 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CH59_2646 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CH59_1686 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CH59_2142 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CH59_2669 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CH59_2147 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CH59_2619 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CH59_3144 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CH59_2867 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D CH59_1840 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CH59_2645 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ypw00780]
D CH59_693 bioC; malonyl-acyl carrier protein O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CH59_384 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_3644 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_416 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_235 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_383 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_237 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_385 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_804 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_2221 bioH; pimelyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CH59_694 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CH59_696 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CH59_692 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CH59_3847 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CH59_695 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CH59_1687 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CH59_1069 molybdopterin oxidoreductase family protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:ypw00785]
D CH59_3472 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CH59_3471 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CH59_4248 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2629 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CH59_2630 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CH59_739 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CH59_959 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CH59_957 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CH59_958 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ypw00790]
D CH59_333 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CH59_3801 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CH59_4069 nudB; dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D CH59_1216 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CH59_2648 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CH59_2544 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CH59_1374 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CH59_3656 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CH59_3898 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CH59_2264 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CH59_3394 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CH59_233 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CH59_2674 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CH59_2673 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CH59_2911 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CH59_827 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CH59_686 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CH59_685 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CH59_683 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CH59_1395 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CH59_343 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CH59_2108 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ypw00670]
D CH59_1374 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CH59_3247 folD; bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CH59_3166 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CH59_3242 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CH59_1652 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CH59_2332 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CH59_957 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CH59_1634 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CH59_1079 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CH59_3950 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CH59_2209 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CH59_1574 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CH59_951 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ypw00860]
D CH59_3088 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CH59_4109 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CH59_2659 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CH59_1705 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CH59_1784 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CH59_1785 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CH59_1658 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CH59_3038 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CH59_2116 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CH59_1694 flavodoxin domain protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D CH59_2948 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CH59_1786 hemX family protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CH59_2250 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CH59_2682 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CH59_2891 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CH59_4384 AAA domain family protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D CH59_3907 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CH59_2298 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ypw00130]
D CH59_1554 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CH59_1553 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CH59_1703 decarboxylase, UbiD family protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CH59_3660 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CH59_956 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D CH59_629 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CH59_955 ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CH59_1716 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CH59_3494 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D CH59_64 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D CH59_63 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CH59_62 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D CH59_60 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CH59_59 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CH59_61 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CH59_4240 ydiI; esterase YdiI K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CH59_2196 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CH59_3309 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CH59_192 3-beta hydroxysteroid dehydrogenase/isomerase family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ypw00900]
D CH59_2883 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CH59_811 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CH59_2688 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CH59_4111 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CH59_2689 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CH59_3193 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CH59_1382 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CH59_382 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CH59_3660 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CH59_2884 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CH59_2532 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CH59_810 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ypw00907]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CH59_2735 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CH59_2736 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CH59_940 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ypw00523]
D CH59_1804 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CH59_1805 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ypw01053]
D CH59_64 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D CH59_267 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D CH59_3710 salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D CH59_1087 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D CH59_1089 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
D CH59_3701 AMP-binding enzyme family protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D CH59_3705 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D CH59_3703 thiazolinyl imide reductase family protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D CH59_3704 methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
C 01055 Biosynthesis of vancomycin group antibiotics
D CH59_1805 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ypw00946]
D CH59_3685 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_1249 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ypw00332]
D CH59_2823 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CH59_2822 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ypw00261]
D CH59_2684 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CH59_2683 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CH59_1631 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CH59_1401 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CH59_2208 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D CH59_1896 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CH59_3005 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CH59_1380 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ypw00521]
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CH59_3566 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CH59_3173 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CH59_3450 oxidoreductase, NAD-binding Rossmann fold family protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CH59_3451 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CH59_1804 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CH59_1805 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CH59_3099 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ypw00525]
D CH59_1804 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CH59_1805 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ypw00401]
D CH59_2770 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CH59_3911 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CH59_3912 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CH59_376 pksC; polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_238 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_383 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_237 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CH59_236 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ypw00999]
D CH59_935 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CH59_2338 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CH59_3685 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CH59_1249 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ypw00997]
D CH59_870 iucD; L-lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D CH59_872 acetyltransferase domain protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D CH59_873 iucA / IucC family protein K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D CH59_874 iucA / IucC family protein K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D CH59_871 iucA / IucC family protein K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ypw00362]
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_1937 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CH59_2403 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CH59_4127 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CH59_2177 glcNAc-PI de-N-acetylase family protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D CH59_2176 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:ypw00627]
D CH59_395 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CH59_3660 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:ypw00364]
D CH59_1722 chlorophyllase enzyme family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ypw00625]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ypw00361]
D CH59_1722 chlorophyllase enzyme family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ypw00623]
D CH59_1722 chlorophyllase enzyme family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D CH59_1937 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ypw00633]
D CH59_4208 flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D CH59_1701 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CH59_3633 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D CH59_3547 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CH59_3546 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CH59_3545 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ypw00930]
D CH59_1700 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D CH59_3634 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CH59_1937 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ypw00626]
D CH59_336 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CH59_3940 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ypw03020]
D CH59_1670 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CH59_1669 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CH59_2325 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CH59_2133 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ypw03010]
D CH59_449 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CH59_815 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CH59_2306 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CH59_2324 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CH59_2317 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CH59_2507 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CH59_2293 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CH59_2314 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CH59_2485 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CH59_2299 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CH59_2323 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CH59_2292 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CH59_2322 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CH59_2313 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D CH59_2554 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CH59_2759 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CH59_2309 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CH59_2508 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CH59_2304 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CH59_1387 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CH59_1219 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CH59_1674 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CH59_2303 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CH59_2300 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CH59_2301 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CH59_2312 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CH59_2315 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CH59_1672 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CH59_2509 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CH59_1673 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CH59_1675 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CH59_2484 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CH59_2310 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CH59_2319 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CH59_2307 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CH59_2326 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CH59_2316 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CH59_2762 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CH59_4264 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CH59_2533 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CH59_2305 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CH59_2302 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CH59_2311 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CH59_577 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CH59_2534 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CH59_2144 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CH59_2308 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CH59_2318 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CH59_2932 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CH59_2203 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CH59_241 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CH59_2145 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CH59_2056 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CH59_4265 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CH59_2931 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CH59_2321 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CH59_2102 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_2783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1693 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1853 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2104 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_781 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1646 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1642 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_780 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1644 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1689 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1852 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ypw00970]
D CH59_3084 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_3086 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1648 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1691 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_2785 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1796 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2747 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2748 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2749 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_3248 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_3619 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_262 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_3712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_3435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_1851 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_779 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_770 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_3297 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CH59_3497 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CH59_3495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CH59_1854 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_782 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_2103 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_1495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_3298 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_977 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_1680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_1795 tRNA-His K14226 tRNA-His; tRNA His
D CH59_1649 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_2784 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_1692 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_1436 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_1793 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_2547 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_2609 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3498 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3296 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3092 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_722 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_723 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_3306 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_721 tRNA-OTHER K14229 tRNA-Lys; tRNA Lys
D CH59_1222 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_3496 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_3499 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_2548 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_839 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_838 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_1525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CH59_904 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CH59_1792 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_1955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_582 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_4088 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_4098 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_393 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_619 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_2746 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_1643 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1679 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1682 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_618 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1850 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CH59_1681 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CH59_3953 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CH59_4223 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_4224 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3089 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3091 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3090 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_1986 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CH59_3088 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CH59_3509 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CH59_2744 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CH59_4070 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CH59_428 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CH59_2029 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CH59_2028 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CH59_4267 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CH59_462 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CH59_2009 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CH59_2993 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CH59_316 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CH59_2332 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CH59_2604 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CH59_3483 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CH59_1385 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CH59_976 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CH59_4077 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CH59_790 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CH59_3194 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CH59_4263 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CH59_4262 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CH59_4198 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CH59_2249 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ypw03060]
D CH59_2320 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CH59_1677 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CH59_2546 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CH59_2871 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CH59_2872 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CH59_2870 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CH59_2059 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CH59_1300 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CH59_2161 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CH59_1301 secretion monitor family protein K13301 secM; secretion monitor
D CH59_2758 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CH59_1749 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CH59_1713 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D CH59_1712 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D CH59_1711 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CH59_3470 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
D CH59_3602 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CH59_1384 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ypw04122]
D CH59_3176 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3982 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_649 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CH59_1756 tusA; sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CH59_2291 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CH59_2290 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CH59_2289 tusD; sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CH59_394 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CH59_199 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CH59_683 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CH59_686 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CH59_684 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D CH59_344 moeB; molybdopterin synthase sulfurylase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CH59_685 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CH59_1395 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CH59_2886 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CH59_1665 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CH59_1664 thiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ypw03018]
D CH59_1076 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CH59_246 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CH59_1812 DEAD/DEAH box helicase family protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CH59_2557 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CH59_1481 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CH59_2559 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CH59_1768 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CH59_1810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_1391 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CH59_1514 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CH59_1488 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CH59_3235 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CH59_2649 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ypw03030]
D CH59_3385 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D CH59_771 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CH59_800 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_4385 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_2943 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CH59_230 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CH59_3481 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CH59_1434 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D CH59_2605 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CH59_2053 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CH59_1545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CH59_1220 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_772 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CH59_801 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ypw03410]
D CH59_3882 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CH59_3587 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CH59_913 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CH59_2146 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CH59_3331 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CH59_2031 tag; DNA-3-methyladenine glycosylase I family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CH59_4348 uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CH59_3955 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CH59_538 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_974 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ypw03420]
D CH59_212 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CH59_1541 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CH59_690 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CH59_3300 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CH59_1776 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ypw03430]
D CH59_2695 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CH59_1490 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D CH59_1075 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D CH59_1776 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CH59_280 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CH59_3200 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CH59_2885 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CH59_974 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_800 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_4385 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_2053 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CH59_2943 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CH59_3481 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CH59_230 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CH59_771 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CH59_3385 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D CH59_2605 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CH59_1434 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2246 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_4035 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ypw03440]
D CH59_974 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_2052 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D CH59_3605 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CH59_2945 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CH59_2742 recA; protein RecA K03553 recA; recombination protein RecA
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_4066 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CH59_4065 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CH59_4067 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CH59_2130 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CH59_843 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CH59_846 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D CH59_842 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CH59_800 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_4385 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_2053 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CH59_2943 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CH59_3481 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CH59_230 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CH59_771 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CH59_3385 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D CH59_2605 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CH59_1434 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D CH59_2202 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CH59_2938 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ypw03250]
D CH59_2262 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ypw02010]
D CH59_3053 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D CH59_2173 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CH59_3054 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CH59_3055 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CH59_3056 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CH59_2274 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D CH59_2276 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D CH59_2275 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CH59_2379 putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CH59_2381 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D CH59_2382 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CH59_2174 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D CH59_701 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CH59_700 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CH59_699 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CH59_704 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D CH59_3117 yfuA; yfuA K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3017 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3020 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3116 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D CH59_3021 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D CH59_3115 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CH59_3022 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CH59_1338 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D CH59_1339 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D CH59_1340 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D CH59_513 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D CH59_510 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D CH59_511 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D CH59_512 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D CH59_3524 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CH59_3525 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D CH59_3526 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CH59_644 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D CH59_646 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D CH59_645 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CH59_1626 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D CH59_1627 binding--dependent transport system inner membrane component family protein K10109 malF; maltose/maltodextrin transport system permease protein
D CH59_1628 binding--dependent transport system inner membrane component family protein K10110 malG; maltose/maltodextrin transport system permease protein
D CH59_1009 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_20 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1624 malK; maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_3265 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_2577 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1256 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1010 bacterial extracellular solute-binding family protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CH59_1011 binding--dependent transport system inner membrane component family protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CH59_1012 binding--dependent transport system inner membrane component family protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CH59_115 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D CH59_112 binding--dependent transport system inner membrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D CH59_113 binding--dependent transport system inner membrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D CH59_114 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D CH59_2475 putative phospholipid-binding protein mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D CH59_2474 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CH59_2473 putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CH59_2476 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D CH59_2472 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CH59_38 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_906 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_1910 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_36 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_908 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_1911 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_37 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_907 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_1912 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_2097 rbsD / FucU transport family protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D CH59_3866 periplasmic binding domain protein K10537 araF; L-arabinose transport system substrate-binding protein
D CH59_3864 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D CH59_3865 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D CH59_1849 ytfQ; ABC transporter periplasmic-binding protein ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CH59_1845 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D CH59_1847 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D CH59_1848 ccmA; heme ABC exporter, ATP-binding protein CcmA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CH59_331 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CH59_329 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D CH59_330 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D CH59_1990 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D CH59_1988 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D CH59_1989 ccmA; heme ABC exporter, ATP-binding protein CcmA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D CH59_2731 periplasmic binding domain protein K17202 eryG; erythritol transport system substrate-binding protein
D CH59_2734 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D CH59_2733 ccmA; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D CH59_1006 periplasmic binding domain protein K17205 xltC; putative xylitol transport system substrate-binding protein
D CH59_1007 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D CH59_1008 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D CH59_3452 periplasmic binding domain protein K17208 ibpA; inositol transport system substrate-binding protein
D CH59_3455 branched-chain amino acid transport system / permease component family protein K17209 iatP; inositol transport system permease protein
D CH59_1731 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CH59_1730 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CH59_1729 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CH59_1728 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CH59_2074 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_2857 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_2073 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CH59_3236 binding--dependent transport system inner membrane component family protein K02037 pstC; phosphate transport system permease protein
D CH59_2072 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CH59_3237 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CH59_2071 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CH59_3238 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CH59_660 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CH59_658 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D CH59_659 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D CH59_661 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CH59_3663 hisM; histidine transport system permease protein hisM K10015 hisM; histidine transport system permease protein
D CH59_3662 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D CH59_3664 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3661 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D CH59_49 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D CH59_50 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D CH59_51 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_503 bacterial extracellular solute-binding s, 3 family protein K09996 artJ; arginine transport system substrate-binding protein
D CH59_491 lysine-arginine-ornithine-binding periplasmic family protein K09997 artI; arginine transport system substrate-binding protein
D CH59_493 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D CH59_492 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D CH59_490 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3488 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CH59_3486 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D CH59_3487 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CH59_3485 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3320 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CH59_3319 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D CH59_3318 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_1743 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CH59_1742 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D CH59_1741 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D CH59_1740 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CH59_1739 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CH59_526 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D CH59_787 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CH59_524 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D CH59_786 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D CH59_525 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D CH59_785 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CH59_656 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D CH59_655 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D CH59_654 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D CH59_653 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CH59_652 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D CH59_691 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein
D CH59_3938 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_4170 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_3937 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CH59_3936 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CH59_3935 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CH59_3934 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CH59_1951 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D CH59_1950 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D CH59_1949 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D CH59_1948 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D CH59_1947 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D CH59_4186 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D CH59_4187 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D CH59_4188 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D CH59_4189 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D CH59_4190 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D CH59_569 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D CH59_570 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein
D CH59_571 yejE; inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein
D CH59_572 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D CH59_1162 periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D CH59_302 periplasmic binding family protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CH59_303 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D CH59_304 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D CH59_305 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CH59_2657 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D CH59_2658 fhuB; iron(3+)-hydroxamate import system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D CH59_2656 fhuC; iron(3+)-hydroxamate import ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D CH59_2663 periplasmic binding family protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D CH59_4259 fecCD transport family protein K06073 btuC; vitamin B12 transport system permease protein
D CH59_4257 ABC transporter family protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D CH59_4062 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D CH59_4064 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D CH59_4063 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CH59_4272 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D CH59_4274 ABC 3 transport family protein K11605 sitC; manganese/iron transport system permease protein
D CH59_4275 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D CH59_4273 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D CH59_1452 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D CH59_1450 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D CH59_1451 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D CH59_1449 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D CH59_209 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D CH59_211 lolC; lipo-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D CH59_210 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CH59_3624 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D CH59_3623 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D CH59_3622 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D CH59_3621 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CH59_2607 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D CH59_2608 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D CH59_2466 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CH59_1747 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D CH59_1748 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CH59_1092 ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CH59_3707 ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CH59_1093 ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CH59_3708 ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CH59_445 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CH59_2916 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CH59_2917 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CH59_2188 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CH59_3461 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CH59_1867 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CH59_470 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CH59_469 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CH59_477 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CH59_3068 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:ypw02060]
D CH59_3075 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CH59_3076 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CH59_3074 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CH59_228 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D CH59_3505 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CH59_2453 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CH59_2026 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CH59_3560 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CH59_3558 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CH59_3559 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CH59_3409 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CH59_3410 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D CH59_3411 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D CH59_1030 PTS system fructose IIA component family protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CH59_1033 PTS system, mannose/fructose/sorbose, IIB component family protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CH59_1032 PTS system sorbose-specific iic component family protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CH59_1031 PTS system mannose/fructose/sorbose IID component family protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CH59_105 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CH59_106 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CH59_3669 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D CH59_546 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D CH59_544 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CH59_545 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CH59_1077 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D CH59_2461 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D CH59_2463 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ypw03070]
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_4403 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D CH59_1602 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D CH59_4481 type III secretion YscO family protein K04056 yscO; type III secretion protein O
D CH59_4482 type III secretion system needle length determinant K04057 yscP; type III secretion protein P
D CH59_4475 type III secretion protein, YscX family K04059 yscX; type III secretion protein X
D CH59_1606 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D CH59_4400 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D CH59_4478 type III secretion regulator YopN/LcrE/InvE/MxiC K04058 yscW; type III secretion protein W
D CH59_4407 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D CH59_1599 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D CH59_4393 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D CH59_1591 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D CH59_4394 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D CH59_1590 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D CH59_4395 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D CH59_1589 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D CH59_4396 yscU; yop s translocation protein U K03229 yscU; type III secretion protein U
D CH59_1588 escU; escU K03229 yscU; type III secretion protein U
D CH59_4473 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D CH59_1596 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D CH59_4480 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CH59_1595 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CH59_4483 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D CH59_1592 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D CH59_4409 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D CH59_1046 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D CH59_1058 bacterial chaperone lipo family protein K02465 gspS; general secretion pathway protein S
D CH59_1045 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D CH59_1049 type II secretion system (T2SS), F family protein K02455 gspF; general secretion pathway protein F
D CH59_1050 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D CH59_1051 hypothetical protein K02457 gspH; general secretion pathway protein H
D CH59_1052 type II secretion system (T2SS), I family protein K02458 gspI; general secretion pathway protein I
D CH59_1053 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D CH59_1054 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D CH59_1055 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D CH59_1047 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CH59_1057 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D CH59_2871 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CH59_2872 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CH59_1677 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CH59_2546 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CH59_2320 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CH59_2870 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CH59_2059 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CH59_1300 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CH59_1301 secretion monitor family protein K13301 secM; secretion monitor
D CH59_1749 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CH59_2161 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CH59_2758 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CH59_1713 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D CH59_1712 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D CH59_1711 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CH59_3470 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
D CH59_1632 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_4080 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_4078 hemagluttinin repeat family protein K11016 shlA; hemolysin
D CH59_1633 shlA; hemolysin K11016 shlA; hemolysin
D CH59_4434 yadA; adhesin yadA K12341 yadA; adhesin YadA
D CH59_453 hypothetical protein K12342 yadB_C; adhesin YadB/C
D CH59_454 coiled stalk of trimeric autotransporter adhesin family protein K12342 yadB_C; adhesin YadB/C
D CH59_365 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_2359 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_2368 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_894 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_1101 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_3610 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_1354 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_3137 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_367 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_891 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_1620 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_1359 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_3138 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_351 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_2349 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_1348 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_357 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_2356 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_3609 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_1345 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_369 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_889 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_2351 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3608 type VI secretion system peptidoglycan-associated domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_1346 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3140 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3128 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_366 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_2352 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_1355 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ypw02020]
D CH59_2856 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CH59_2855 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CH59_3059 phoP; alkaline phosphatase synthesis K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CH59_3801 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CH59_2074 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_2857 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_204 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D CH59_203 phoP; alkaline phosphatase synthesis K07660 phoP; two-component system, OmpR family, response regulator PhoP
D CH59_2229 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CH59_2228 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CH59_621 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D CH59_429 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D CH59_2166 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D CH59_2167 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CH59_1290 hypothetical protein K25864 mzrA; modulator protein MzrA
D CH59_3791 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D CH59_3792 hypothetical protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D CH59_2666 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CH59_969 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CH59_968 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CH59_3221 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D CH59_3220 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D CH59_3225 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D CH59_3224 acrB/AcrD/AcrF family protein K07788 mdtB; multidrug efflux pump
D CH59_3223 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D CH59_3222 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D CH59_3027 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18324 acrD; multidrug efflux pump
D CH59_2537 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D CH59_2538 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D CH59_4256 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D CH59_4126 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CH59_4125 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CH59_176 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D CH59_175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CH59_1123 hypothetical protein K02406 fliC; flagellin
D CH59_1124 hypothetical protein K02406 fliC; flagellin
D CH59_1125 hypothetical protein K02406 fliC; flagellin
D CH59_3324 hypothetical protein K02406 fliC; flagellin
D CH59_1117 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D CH59_3323 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CH59_1116 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_174 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_3571 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CH59_3570 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CH59_3574 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CH59_3573 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CH59_3572 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CH59_2492 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D CH59_1403 hypothetical protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D CH59_2054 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CH59_2767 anaerobic c4-dicarboxylate membrane transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CH59_327 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CH59_3756 histidine kinase family protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CH59_3029 bacterial regulatory s, luxR family protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D CH59_1502 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CH59_1503 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CH59_1504 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D CH59_1505 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D CH59_1957 phosphoglycerate transporter family protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D CH59_1958 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_1963 MASE1 family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_1964 uhpA; transcriptional regulatory protein uhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D CH59_263 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D CH59_788 putative protein rcsF K06080 rcsF; RcsF protein
D CH59_627 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D CH59_624 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_625 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_626 rcsB; rcsB protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CH59_2667 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CH59_3301 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CH59_2745 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CH59_3720 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D CH59_136 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_140 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_135 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_138 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_1821 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_3131 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_539 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_125 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_139 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D CH59_1822 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_4378 caf1A; F1 capsule-anchoring protein K07347 fimD; outer membrane usher protein
D CH59_3715 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_1169 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D CH59_1170 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D CH59_1173 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D CH59_1174 ATP synthase alpha/beta family, nucleotide-binding domain protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CH59_1175 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D CH59_1176 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D CH59_817 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CH59_3162 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CH59_2118 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CH59_2117 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_1941 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CH59_2465 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CH59_3158 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D CH59_3160 AAA domain family protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D CH59_160 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CH59_52 bdlA; biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D CH59_614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D CH59_163 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_1062 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_2018 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D CH59_179 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_180 methyl-accepting chemotaxis (MCP) signaling domain protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_193 sensory box protein K03776 aer; aerotaxis receptor
D CH59_171 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D CH59_172 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CH59_158 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CH59_159 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CH59_1607 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D CH59_1608 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D CH59_1151 AAA domain family protein K10943 flrC; two-component system, response regulator FlrC
D CH59_3485 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3486 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D CH59_3487 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CH59_3488 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CH59_2267 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CH59_916 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_3735 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D CH59_734 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CH59_733 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CH59_732 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D CH59_3873 ABC transporter family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D CH59_3872 hlyD secretion family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D CH59_3870 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_1807 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CH59_1806 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CH59_1439 pemA; pectinesterase A K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D CH59_1143 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CH59_3369 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CH59_905 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ypw02024]
D CH59_2753 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CH59_1488 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CH59_3911 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CH59_3912 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CH59_2769 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_716 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_4245 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CH59_3158 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D CH59_3160 AAA domain family protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D CH59_176 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D CH59_175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CH59_3570 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CH59_263 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D CH59_1452 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D CH59_1450 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D CH59_1451 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D CH59_1449 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D CH59_1446 lsrK; autoinducer 2 kinase LsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D CH59_1447 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D CH59_1453 hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D CH59_1454 lsrG; autoinducer 2-degrading protein lsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D CH59_65 putative protein RhiA K20268 rhiA; rhizosphere induced protein
D CH59_3229 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CH59_4096 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CH59_3231 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CH59_4095 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CH59_3230 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CH59_4094 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CH59_3226 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CH59_4093 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CH59_1743 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CH59_1742 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D CH59_1741 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D CH59_1740 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CH59_1739 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CH59_4288 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CH59_878 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CH59_4287 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D CH59_879 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D CH59_1943 pelY; periplasmic pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D CH59_4048 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1324 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_2267 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CH59_1549 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CH59_3898 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CH59_2877 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CH59_2566 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CH59_3938 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_4170 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_3937 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CH59_3936 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CH59_3935 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CH59_3934 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CH59_3539 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CH59_2597 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CH59_3540 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CH59_2596 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CH59_3541 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CH59_2595 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CH59_3542 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CH59_2594 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CH59_3543 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CH59_2059 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CH59_1677 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CH59_2546 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CH59_2320 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CH59_2870 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CH59_1300 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CH59_1749 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CH59_2161 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CH59_2758 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ypw02030]
D CH59_52 bdlA; biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D CH59_614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D CH59_163 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_1062 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_2018 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D CH59_179 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_180 methyl-accepting chemotaxis (MCP) signaling domain protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_193 sensory box protein K03776 aer; aerotaxis receptor
D CH59_1626 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D CH59_38 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_906 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_1910 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_331 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CH59_1951 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D CH59_172 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CH59_171 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D CH59_158 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CH59_157 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D CH59_159 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CH59_160 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CH59_1148 fliG middle domain protein K02410 fliG; flagellar motor switch protein FliG
D CH59_3336 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CH59_1152 surface presentation of antigens family protein K02416 fliM; flagellar motor switch protein FliM
D CH59_3342 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CH59_1153 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3343 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_1116 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_174 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_1115 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D CH59_173 motB; motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ypw02040]
D CH59_1150 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CH59_3334 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CH59_1149 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_3335 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_1148 fliG middle domain protein K02410 fliG; flagellar motor switch protein FliG
D CH59_3336 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CH59_1147 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D CH59_3337 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D CH59_1146 ATPase, FliI/YscN family protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_3338 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_3339 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CH59_1119 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D CH59_3340 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D CH59_3341 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D CH59_1118 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D CH59_1152 surface presentation of antigens family protein K02416 fliM; flagellar motor switch protein FliM
D CH59_3342 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CH59_1153 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3343 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3344 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CH59_1154 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_3345 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_1155 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_3346 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_1156 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_3347 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_3374 flhE; flagellar protein flhE K03516 flhE; flagellar protein FlhE
D CH59_1158 FHIPEP family protein K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_3375 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_1157 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_3376 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_1142 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CH59_3368 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CH59_1141 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CH59_3367 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CH59_1140 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CH59_3366 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CH59_1139 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CH59_3365 flgD; basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CH59_1138 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D CH59_3364 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D CH59_1135 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D CH59_3363 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D CH59_1134 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CH59_3362 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CH59_1133 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D CH59_3361 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D CH59_1132 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D CH59_3360 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D CH59_1131 rod binding family protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CH59_3359 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D CH59_1130 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CH59_3358 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CH59_1129 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CH59_3357 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CH59_1123 hypothetical protein K02406 fliC; flagellin
D CH59_1124 hypothetical protein K02406 fliC; flagellin
D CH59_1125 hypothetical protein K02406 fliC; flagellin
D CH59_3324 hypothetical protein K02406 fliC; flagellin
D CH59_1122 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D CH59_3325 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CH59_1121 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CH59_3326 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CH59_3327 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D CH59_1116 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_174 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_1115 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D CH59_173 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CH59_1143 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CH59_3369 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CH59_1144 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D CH59_3370 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D CH59_3320 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CH59_3322 fliZ; flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D CH59_1221 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CH59_176 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D CH59_175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CH59_2465 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CH59_1151 AAA domain family protein K10943 flrC; two-component system, response regulator FlrC
D CH59_1117 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D CH59_3323 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CH59_1634 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection [PATH:ypw05135]
D CH59_1891 bacterial Ig-like domain family protein K13735 yeeJ; adhesin/invasin
D CH59_3373 hypothetical protein K13735 yeeJ; adhesin/invasin
D CH59_4434 yadA; adhesin yadA K12341 yadA; adhesin YadA
D CH59_4418 ypkA; protein kinase ypkA K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D CH59_4463 yopT; cysteine protease yopT K08599 yopT; YopT peptidase [EC:3.4.22.-]
D CH59_4452 yopE; outer membrane virulence protein yopE K23473 yopE; outer membrane virulence protein YopE
D CH59_4415 yopH; tyrosine-protein phosphatase yopH K23474 yopH; tyrosine-protein phosphatase YopH [EC:3.1.3.48]
D CH59_4468 yopB; protein yopB K23475 yopB; transloator
D CH59_4467 yopD; protein yopD K23476 yopD; transloator
D CH59_4462 putative protein yopQ K23477 yopQ; protein YopQ
D CH59_4466 yopM; outer membrane protein yopM K23478 yopM; outer membrane protein YopM
D CH59_4417 yopJ; effector protein yopJ K08598 yopJ; YopJ protease family
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D CH59_1891 bacterial Ig-like domain family protein K13735 yeeJ; adhesin/invasin
D CH59_3373 hypothetical protein K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ypw01501]
D CH59_429 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D CH59_621 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D CH59_2897 ampG; protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CH59_221 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CH59_3938 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_4170 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_3937 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CH59_3936 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CH59_3935 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CH59_3934 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CH59_2564 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2934 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2565 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2933 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_862 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2566 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_2237 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CH59_3477 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CH59_1315 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ypw01502]
D CH59_1307 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CH59_1544 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CH59_1313 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CH59_1312 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CH59_1309 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ypw01503]
D CH59_204 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D CH59_203 phoP; alkaline phosphatase synthesis K07660 phoP; two-component system, OmpR family, response regulator PhoP
D CH59_1965 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D CH59_3421 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D CH59_4256 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D CH59_4255 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D CH59_4254 3-beta hydroxysteroid dehydrogenase/isomerase family protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D CH59_4253 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D CH59_4252 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D CH59_4251 small Multidrug Resistance family protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D CH59_4250 eamA-like transporter family protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D CH59_2537 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D CH59_2538 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D CH59_4206 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CH59_4186 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D CH59_4187 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D CH59_4188 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D CH59_4189 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D CH59_4190 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D CH59_1921 prtA; secreted protease A K01406 prtC; serralysin [EC:3.4.24.40]
D CH59_791 hypothetical protein K06079 cutF; copper homeostasis protein (lipoprotein)
D CH59_2166 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D CH59_2167 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CH59_840 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_1491 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_4233 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D CH59_2666 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CH59_2111 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CH59_2262 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CH59_2564 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2934 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2565 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2933 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_862 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_803 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ypw01000]
C 01001 Protein kinases [BR:ypw01001]
D CH59_3432 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D CH59_4418 ypkA; protein kinase ypkA K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D CH59_2856 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CH59_204 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D CH59_2229 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CH59_3791 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D CH59_2166 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D CH59_969 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CH59_3221 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D CH59_2537 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D CH59_4126 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CH59_3571 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CH59_2492 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D CH59_3071 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CH59_3756 histidine kinase family protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CH59_1958 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_1963 MASE1 family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_624 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_625 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_627 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D CH59_2667 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CH59_1890 histidine kinase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CH59_2118 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CH59_3158 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D CH59_172 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CH59_1607 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:ypw01009]
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D CH59_1420 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ypw01002]
D CH59_1384 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CH59_1057 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D CH59_1168 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CH59_4484 pla; coagulase/fibrinolysin K08566 pla; plasminogen activator [EC:3.4.23.48]
D CH59_613 pla; coagulase/fibrinolysin K08566 pla; plasminogen activator [EC:3.4.23.48]
D CH59_3586 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CH59_3202 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CH59_2188 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CH59_566 spr; lipoprotein spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CH59_4214 nlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D CH59_4249 nlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D CH59_3659 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CH59_2490 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CH59_2075 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CH59_3500 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CH59_4417 yopJ; effector protein yopJ K08598 yopJ; YopJ protease family
D CH59_2887 yajL; chaperone protein YajL K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CH59_4463 yopT; cysteine protease yopT K08599 yopT; YopT peptidase [EC:3.4.22.-]
D CH59_4233 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D CH59_433 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D CH59_706 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D CH59_881 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D CH59_426 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CH59_1923 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CH59_1921 prtA; secreted protease A K01406 prtC; serralysin [EC:3.4.24.40]
D CH59_2431 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CH59_1939 pqqL; insulinase family protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CH59_2606 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CH59_3183 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D CH59_3014 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CH59_853 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CH59_206 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CH59_2830 pepD; Xaa-His dipeptidase family protein K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CH59_2849 amidase, hydantoinase/carbamoylase family protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CH59_4061 lysM domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D CH59_816 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CH59_2712 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CH59_1699 metallopeptidase M24 family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CH59_954 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CH59_3790 carboxypeptidase Taq (M32) metallopeptidase family protein K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D CH59_2543 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CH59_128 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CH59_939 peptidase M48 family protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D CH59_2999 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D CH59_808 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CH59_3639 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D CH59_3434 mtfA; protein mtfA K09933 mtfA; MtfA peptidase
D CH59_3783 trypsin family protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D CH59_2666 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CH59_2481 peptidase Do family protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D CH59_2479 degS; periplasmic serine peptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D CH59_3387 prolyl oligopeptidase family protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CH59_523 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_3474 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_667 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CH59_617 putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D CH59_2539 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CH59_2902 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CH59_2904 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CH59_409 hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D CH59_1550 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CH59_3602 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CH59_3386 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CH59_130 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CH59_3961 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D CH59_3905 serine dehydrogenase ase family protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D CH59_2213 glpG; rhomboid family protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D CH59_2198 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CH59_2864 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_2863 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CH59_3218 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CH59_2567 peptidase U32 family protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D CH59_2568 hypothetical protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D CH59_2448 pmbA; protein pmbA K03592 pmbA; PmbA protein
D CH59_2427 modulator of DNA gyrase family protein K03568 tldD; TldD protein
D CH59_633 ecotin family protein K08276 eco; ecotin
D CH59_3443 MG2 domain protein K06894 yfhM; alpha-2-macroglobulin
D CH59_1485 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D CH59_1486 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ypw01003]
D CH59_4147 glycosyl transferase 21 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D CH59_1886 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CH59_2494 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CH59_3671 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CH59_2655 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D CH59_2237 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CH59_3442 transglycosylase family protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CH59_1798 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D CH59_1800 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D CH59_1809 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CH59_3750 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ypw01005]
D CH59_803 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CH59_802 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CH59_1303 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CH59_805 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CH59_2991 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CH59_444 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CH59_4060 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D CH59_2387 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D CH59_565 yeiU; inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D CH59_2149 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CH59_4252 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D CH59_3421 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D CH59_4206 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CH59_1965 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D CH59_4104 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CH59_440 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CH59_2469 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CH59_2470 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CH59_2150 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CH59_2148 glycosyltransferase like 2 family protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D CH59_2151 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CH59_1445 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D CH59_2843 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CH59_784 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CH59_1210 rfaE1; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CH59_2152 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CH59_2956 glycosyl transferase 2 family protein K24673 wbyI; glycosyltransferase [EC:2.4.1.-]
D CH59_2958 glycosyl transferases group 1 family protein K13000 wbyJ; mannosyltransferase [EC:2.4.1.-]
D CH59_2961 glycosyl transferases group 1 family protein K13001 wbyK; mannosyltransferase [EC:2.4.1.-]
D CH59_2967 glycosyltransferase like 2 family protein K13002 wbyL; glycosyltransferase [EC:2.4.1.-]
D CH59_1799 wzyE family protein K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D CH59_1809 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ypw01011]
D CH59_2478 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CH59_1688 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CH59_1308 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CH59_1311 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CH59_1314 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CH59_1307 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CH59_1544 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CH59_1856 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CH59_1312 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CH59_1309 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CH59_1215 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_519 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CH59_4081 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CH59_2237 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CH59_2655 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D CH59_3671 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CH59_3477 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CH59_1315 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CH59_523 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_3474 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CH59_2539 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CH59_617 putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D CH59_667 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CH59_2494 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CH59_3442 transglycosylase family protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CH59_4233 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D CH59_433 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D CH59_3639 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D CH59_4214 nlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D CH59_566 spr; lipoprotein spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CH59_4061 lysM domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D CH59_2431 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CH59_1410 soluble lytic murein transglycosylase L domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CH59_837 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D CH59_3118 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CH59_4042 lytic murein transglycosylase family protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CH59_911 hypothetical protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D CH59_775 lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CH59_4271 transglycosylase SLT domain protein K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D CH59_3151 bacterial extracellular solute-binding s, 3 family protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D CH59_232 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CH59_3475 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CH59_840 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_1491 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_119 N-acetylmuramoyl-L-alanine amidase family protein K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_2625 N-acetylmuramoyl-L-alanine amidase family protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_4226 lpp; major outer membrane lipoprotein Lpp K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ypw01004]
D CH59_376 pksC; polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_238 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CH59_239 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_4152 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_4153 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CH59_384 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_3644 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CH59_416 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_235 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CH59_383 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_237 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CH59_410 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CH59_385 fabA-like domain protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_804 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CH59_2061 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CH59_2986 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CH59_2925 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CH59_3923 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CH59_2910 tesC; long-chain acyl-CoA thioesterase tesC K12500 tesC; thioesterase III [EC:3.1.2.-]
D CH59_3704 methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D CH59_3705 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D CH59_1610 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CH59_4048 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1324 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1552 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D CH59_240 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CH59_1217 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CH59_1192 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ypw01008]
D CH59_267 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D CH59_3704 methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D CH59_3705 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D CH59_3701 AMP-binding enzyme family protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D CH59_1087 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D CH59_3703 thiazolinyl imide reductase family protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D CH59_1089 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
D CH59_3702 thioesterase domain protein K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:ypw01006]
D CH59_2884 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CH59_2532 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CH59_810 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CH59_1489 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CH59_2196 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CH59_1553 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CH59_2891 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ypw01007]
D CH59_3088 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CH59_3509 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CH59_2650 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CH59_4198 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CH59_2249 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CH59_2993 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CH59_4077 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CH59_316 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CH59_1385 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CH59_2604 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CH59_3483 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CH59_976 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CH59_4070 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CH59_428 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CH59_3194 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CH59_2029 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CH59_2028 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CH59_462 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CH59_790 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CH59_4267 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CH59_2744 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CH59_4263 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CH59_4262 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CH59_430 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D CH59_2038 aminotransferase class I and II family protein K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D CH59_92 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CH59_3101 aminotransferase class I and II family protein K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CH59_1543 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CH59_291 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CH59_2153 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CH59_694 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CH59_3062 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CH59_2265 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CH59_3760 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D CH59_3228 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CH59_696 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CH59_2659 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CH59_1840 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CH59_452 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CH59_2809 aminotransferase class-V family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D CH59_4256 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D CH59_1802 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ypw00194]
D CH59_2077 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CH59_2078 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CH59_2079 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CH59_2080 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CH59_2081 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CH59_2082 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CH59_2083 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CH59_2084 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CH59_2085 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ypw03000]
D CH59_3863 helix-turn-helix domain protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D CH59_1531 helix-turn-helix domain protein K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D CH59_1532 helix-turn-helix domain protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D CH59_3561 chbR; HTH-type transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D CH59_3706 helix-turn-helix domain protein K05372 ybtA; AraC family transcriptional regulator
D CH59_1407 helix-turn-helix domain protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D CH59_4398 helix-turn-helix domain protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CH59_2165 methylated-DNA--[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CH59_832 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CH59_1831 bacterial regulatory helix-turn-helix, lysR family protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D CH59_1725 bacterial regulatory helix-turn-helix, lysR family protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CH59_1388 nhaR; transcriptional activator protein nhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D CH59_1861 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CH59_948 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CH59_1325 bacterial regulatory helix-turn-helix, lysR family protein K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D CH59_3901 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D CH59_34 dmlR; HTH-type transcriptional regulator DmlR K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CH59_2178 bacterial regulatory helix-turn-helix, lysR family protein K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D CH59_2439 bacterial regulatory helix-turn-helix, lysR family protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D CH59_1846 bacterial regulatory helix-turn-helix, lysR family protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D CH59_521 deoR-like helix-turn-helix domain protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D CH59_2212 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CH59_1036 deoR-like helix-turn-helix domain protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D CH59_2722 deoR-like helix-turn-helix domain protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D CH59_1017 bacterial regulatory s, lacI family protein K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D CH59_35 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_1067 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_1107 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_1254 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_1987 helix-turn-helix domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_3440 rafR; HTH-type transcriptional regulator rafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_3818 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CH59_2200 bacterial regulatory s, lacI family protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D CH59_1320 fruR; fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D CH59_2454 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D CH59_4217 bacterial regulatory s, lacI family protein K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D CH59_1903 gntR; HTH-type transcriptional regulator gntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D CH59_72 idnR; HTH-type transcriptional regulator idnR K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D CH59_2590 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D CH59_4157 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CH59_3270 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CH59_3977 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D CH59_2628 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CH59_562 bacterial regulatory s, gntR family protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D CH59_1287 bacterial regulatory s, gntR family protein K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D CH59_3227 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CH59_677 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CH59_2935 acrR; HTH-type transcriptional regulator AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D CH59_2140 slmA; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D CH59_4207 nemR; HTH-type transcriptional repressor nemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CH59_1860 fabR; HTH-type transcriptional repressor fabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D CH59_2089 asnC; regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CH59_467 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CH59_186 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CH59_2915 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D CH59_4287 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D CH59_879 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D CH59_2215 malT; HTH-type transcriptional regulator malT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D CH59_4203 winged helix DNA-binding domain protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CH59_2797 winged helix DNA-binding domain protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D CH59_2981 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CH59_2327 zntR; Zn(II)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D CH59_3513 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CH59_1549 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CH59_1636 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CH59_120 kdgR; pectin degradation repressor protein kdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CH59_2267 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CH59_3799 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CH59_3175 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CH59_1482 nsrR; HTH-type transcriptional repressor nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D CH59_2703 bacterial regulatory, arsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CH59_4058 SIS domain protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CH59_1687 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CH59_2407 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CH59_1408 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D CH59_2530 winged helix-turn-helix DNA-binding family protein K07724 ner; Ner family transcriptional regulator
D CH59_3672 winged helix-turn-helix DNA-binding family protein K07724 ner; Ner family transcriptional regulator
D CH59_1336 bacterial extracellular solute-binding s, 5 Middle family protein K11925 sgrR; SgrR family transcriptional regulator
D CH59_1418 nadR; trifunctional NAD biosynthesis/regulator protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D CH59_986 mqsA; antitoxin MqsA K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D CH59_1926 sugar diacid recognition family protein K02647 cdaR; carbohydrate diacid regulator
D CH59_703 ModE molybdate transport repressor domain protein K02019 modE; molybdate transport system regulatory protein
D CH59_1979 hth; helix-turn-helix XRE family protein K07726 K07726; putative transcriptional regulator
D CH59_2205 met Apo-repressor, MetJ family protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D CH59_3315 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CH59_2899 bolA; protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CH59_4362 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4353 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4456 sopB; protein sopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_1704 rfaH; transcription elongation factor/antiterminator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D CH59_2528 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CH59_3502 marR family protein K02565 nagC; N-acetylglucosamine repressor
D CH59_3849 mlc; protein mlc K15545 mlc; transcriptional regulator of PTS gene
D CH59_2024 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D CH59_4175 tyrR; transcriptional regulatory protein tyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D CH59_3004 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D CH59_4184 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D CH59_4181 pspC; phage shock protein C K03973 pspC; phage shock protein C
D CH59_1447 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D CH59_2451 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase
D CH59_757 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D CH59_989 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D CH59_3697 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D CH59_930 hypothetical protein K07735 algH; putative transcriptional regulator
D CH59_2651 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CH59_2876 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CH59_2824 crl; sigma factor-binding protein crl K11926 crl; sigma factor-binding protein Crl
D CH59_1318 mraZ family protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ypw03021]
D CH59_2325 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CH59_1670 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CH59_1669 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CH59_2133 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CH59_1221 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CH59_2694 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CH59_3596 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CH59_1746 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D CH59_2465 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CH59_1117 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D CH59_3323 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CH59_1343 rapA; RNA polymerase-associated protein rapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D CH59_2550 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D CH59_2879 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CH59_1676 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CH59_2486 putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D CH59_2487 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D CH59_3597 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D CH59_3598 rseB; sigma-E factor regulatory protein rseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D CH59_3599 positive regulator of sigma(E), RseC/MucC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D CH59_2651 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CH59_2540 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D CH59_2227 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D CH59_1810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CH59_795 rof; protein rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:ypw03019]
D CH59_246 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CH59_2424 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CH59_3603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CH59_1481 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CH59_1497 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CH59_1812 DEAD/DEAH box helicase family protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D CH59_2559 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CH59_1768 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CH59_2557 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CH59_1810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CH59_2171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CH59_1391 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CH59_1514 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CH59_1488 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CH59_3235 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CH59_2649 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CH59_1076 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CH59_2745 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CH59_2419 csrD; RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD
D CH59_2195 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D CH59_2602 rraB; regulator of ribonuclease activity B K09893 rraB; regulator of ribonuclease activity B
D CH59_2462 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D CH59_3780 hrpA; RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CH59_2654 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ypw03011]
D CH59_449 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CH59_815 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CH59_2306 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CH59_2324 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CH59_2317 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CH59_2507 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CH59_2293 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CH59_2314 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CH59_2485 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CH59_2299 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CH59_2323 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CH59_2292 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CH59_2322 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CH59_2313 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D CH59_2554 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CH59_2759 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CH59_2309 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CH59_2508 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CH59_2304 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CH59_1387 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CH59_1219 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CH59_1674 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CH59_2303 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CH59_2300 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CH59_2301 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CH59_2312 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CH59_2315 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CH59_2509 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CH59_1673 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CH59_1675 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CH59_1672 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CH59_2484 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CH59_2310 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CH59_2319 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CH59_2307 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CH59_2326 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CH59_2316 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CH59_2762 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CH59_4264 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CH59_2533 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CH59_2305 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CH59_2302 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CH59_2311 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CH59_2534 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CH59_2144 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CH59_2308 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CH59_2318 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CH59_2932 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CH59_2203 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CH59_241 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CH59_2145 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CH59_2056 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CH59_4265 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CH59_2931 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CH59_2321 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CH59_577 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CH59_1642 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_780 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1644 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1689 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1852 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2102 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_2783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1693 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1853 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2104 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_781 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1646 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ypw03009]
D CH59_3603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CH59_3432 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D CH59_1497 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CH59_3604 era; GTP-binding protein Era K03595 era; GTPase
D CH59_2536 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D CH59_2651 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CH59_2550 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D CH59_2879 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CH59_1676 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CH59_575 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CH59_1369 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CH59_2331 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CH59_1435 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D CH59_1750 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CH59_932 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CH59_2086 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CH59_1317 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CH59_2499 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CH59_1922 SAM-dependent methyltransferase family protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D CH59_3417 ubiE/COQ5 methyltransferase family protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CH59_1480 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CH59_2542 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CH59_56 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D CH59_1275 methyltransferase small domain protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D CH59_3478 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CH59_396 rlmI; ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CH59_1924 ribosomal RNA small subunit methyltransferase D, RsmJ family protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D CH59_422 THUMP domain protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D CH59_830 ftsJ-like methyltransferase family protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D CH59_3190 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CH59_508 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D CH59_1364 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CH59_3908 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CH59_245 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CH59_2780 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CH59_197 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CH59_2794 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D CH59_1433 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CH59_4083 acetyltransferase family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CH59_2760 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CH59_456 ycaO-type kinase domain protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D CH59_2409 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CH59_3637 prmB; (glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D CH59_205 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D CH59_246 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CH59_2424 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CH59_929 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CH59_3391 dbpA; ATP-independent RNA helicase dbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D CH59_2559 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CH59_3593 DEAD/DEAH box helicase family protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D CH59_1498 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CH59_3197 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D CH59_1487 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CH59_2337 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CH59_2132 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CH59_2552 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CH59_2549 rimP; ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D CH59_3246 hypothetical protein K14761 rlbA; ribosome-associated protein
D CH59_3479 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D CH59_3491 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D CH59_2541 yhbY; RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D CH59_2022 hypothetical protein K14762 yibL; ribosome-associated protein
D CH59_2447 hypothetical protein K09889 yjgA; ribosome-associated protein
D CH59_2778 raiA; ribosome-associated inhibitor A K05809 raiA; ribosome-associated inhibitor A
D CH59_4115 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D CH59_242 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ypw03016]
D CH59_1214 poly A polymerase head domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CH59_3088 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CH59_790 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CH59_1385 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CH59_3483 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CH59_316 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CH59_3509 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CH59_4077 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CH59_976 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CH59_4070 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CH59_2744 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CH59_428 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CH59_4267 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CH59_462 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CH59_2993 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CH59_2604 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CH59_3194 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CH59_4263 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CH59_4262 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CH59_4198 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CH59_2249 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CH59_2123 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CH59_225 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CH59_914 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CH59_789 tsaA; tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CH59_3653 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CH59_2553 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CH59_2690 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D CH59_3176 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3982 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_2337 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CH59_1489 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CH59_2060 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CH59_2087 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CH59_3959 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CH59_2516 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CH59_2057 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CH59_4211 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D CH59_2138 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CH59_3885 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CH59_4047 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CH59_2653 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CH59_1416 hypothetical protein K06020 ettA; energy-dependent translational throttle protein EttA
D CH59_2029 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CH59_2028 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CH59_2650 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CH59_2978 ybaK; cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CH59_3150 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CH59_1548 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CH59_2408 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CH59_669 dihydrouridine synthase family protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D CH59_3493 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CH59_4073 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CH59_4074 cmoB; tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CH59_438 smtA; protein smtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D CH59_1858 trmA; tRNA (uracil(54)-C(5))-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D CH59_2761 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CH59_2794 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D CH59_2131 trmH; tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D CH59_3174 RNA methyltransferase, TrmH, group 1 family protein K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D CH59_2164 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CH59_3594 methyltransferase small domain protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CH59_821 RNA pseudouridylate synthase family protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D CH59_1364 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CH59_199 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CH59_4165 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CH59_1756 tusA; sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CH59_2291 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CH59_2290 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CH59_2289 tusD; sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CH59_394 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CH59_3178 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D CH59_966 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CH59_3643 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CH59_2868 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CH59_2911 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CH59_2674 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CH59_2673 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CH59_827 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CH59_1494 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CH59_2869 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CH59_2886 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CH59_797 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CH59_3011 acetyltransferase family protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D CH59_4050 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CH59_1218 tsaD; tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CH59_1492 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CH59_836 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CH59_1481 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CH59_2557 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ypw03012]
D CH59_3892 hypothetical protein K03113 EIF1; translation initiation factor 1
D CH59_2551 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CH59_4266 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CH59_2280 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CH59_814 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CH59_2295 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_1678 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_2294 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CH59_4108 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CH59_812 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CH59_4107 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CH59_4114 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CH59_472 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CH59_559 yeiP; elongation factor P-like protein K02356 efp; elongation factor P
D CH59_1508 efp; translation elongation factor P K02356 efp; elongation factor P
D CH59_1501 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D CH59_1509 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D CH59_3641 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D CH59_975 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CH59_1432 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CH59_2328 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D CH59_792 RF-1 domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ypw03110]
D CH59_474 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CH59_2782 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CH59_2903 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CH59_2197 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D CH59_1391 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CH59_3180 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D CH59_3232 hsp70 family protein K04046 yegD; hypothetical chaperone protein
D CH59_1514 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CH59_1390 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CH59_1365 djlA; dnaJ-like protein djlA K05801 djlA; DnaJ like chaperone protein
D CH59_3179 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D CH59_2231 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D CH59_745 grpE family protein K03687 GRPE; molecular chaperone GrpE
D CH59_2041 ibpA; small heat shock protein ibpA K04080 ibpA; molecular chaperone IbpA
D CH59_2040 hsp20/alpha crystallin family protein K04081 ibpB; molecular chaperone IbpB
D CH59_2232 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D CH59_1515 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CH59_2666 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CH59_2543 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CH59_2084 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CH59_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_138 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_1821 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_2161 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CH59_2168 cpxP; periplasmic protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D CH59_3554 hdeB; protein hdeB K19778 hdeB; acid stress chaperone HdeB
D CH59_2727 dmsD; twin-arginine leader-binding protein dmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D CH59_3108 nitrate reductase delta subunit K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D CH59_3512 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CH59_2262 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CH59_2992 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CH59_2908 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CH59_2287 domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CH59_2513 fklB; FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D CH59_1383 fkpB; FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D CH59_2285 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase slyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CH59_1816 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CH59_1367 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CH59_1811 trxA; thioredoxin K03671 TXN; thioredoxin
D CH59_2793 trxA; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D CH59_2984 thioredoxin family protein K05838 ybbN; putative thioredoxin
D CH59_516 grxA; glutaredoxin, GrxA family K03674 grxA; glutaredoxin 1
D CH59_2160 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CH59_4212 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D CH59_2111 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CH59_3979 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D CH59_973 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CH59_1520 cytochrome C biogenesis transmembrane region family protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D CH59_3627 dsbE; disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ypw04131]
D CH59_3189 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CH59_3966 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CH59_713 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CH59_4059 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_4225 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ypw04121]
C 03051 Proteasome [BR:ypw03051]
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ypw03032]
D CH59_772 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CH59_1655 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D CH59_2905 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CH59_4261 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D CH59_447 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CH59_2054 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CH59_1545 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CH59_1220 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_800 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_4385 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_2053 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CH59_2605 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CH59_3481 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CH59_230 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CH59_771 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CH59_2943 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CH59_1434 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D CH59_3385 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D CH59_801 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_3852 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D CH59_2246 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_4035 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_3565 seqA; protein seqA K03645 seqA; negative modulator of initiation of replication
D CH59_2997 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D CH59_628 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CH59_2051 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CH59_1193 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CH59_1196 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CH59_3902 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CH59_3958 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ypw03036]
D CH59_3603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CH59_3945 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D CH59_1655 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D CH59_2905 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CH59_4261 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D CH59_447 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CH59_1407 helix-turn-helix domain protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D CH59_2054 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CH59_2496 SIS domain protein K12961 diaA; DnaA initiator-associating protein
D CH59_397 hemimethylated DNA binding domain protein K11940 hspQ; heat shock protein HspQ
D CH59_47 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D CH59_2407 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CH59_1488 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CH59_948 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CH59_467 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CH59_186 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CH59_579 37-kD nucleoid-associated bacterial family protein K06899 ndpA; nucleoid-associated protein
D CH59_435 hypothetical protein K03632 mukB; chromosome partition protein MukB
D CH59_436 mukE; chromosome partition protein mukE K03804 mukE; chromosome partition protein MukE
D CH59_437 mukF; chromosome partition protein mukF K03633 mukF; chromosome partition protein MukF
D CH59_1305 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CH59_2687 ftsB; cell division protein ftsB K05589 ftsB; cell division protein FtsB
D CH59_1748 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CH59_1315 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CH59_466 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CH59_1316 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D CH59_2199 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D CH59_1306 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CH59_1310 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CH59_1747 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D CH59_1304 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CH59_3079 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D CH59_952 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D CH59_2186 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D CH59_424 hypothetical protein K18657 zapC; cell division protein ZapC
D CH59_2618 hypothetical protein K18778 zapD; cell division protein ZapD
D CH59_2483 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D CH59_2512 hypothetical protein K07269 ytfB; cell division protein YtfB
D CH59_840 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_1491 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_2564 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2934 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_4044 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CH59_4045 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CH59_4046 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CH59_405 sulA; cell division inhibitor sulA K13053 sulA; cell division inhibitor SulA
D CH59_2140 slmA; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D CH59_3565 seqA; protein seqA K03645 seqA; negative modulator of initiation of replication
D CH59_2420 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CH59_2421 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CH59_2422 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CH59_3476 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CH59_4457 merR HTH regulatory family protein K03496 parA; chromosome partitioning protein
D CH59_4363 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D CH59_4362 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4353 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4456 sopB; protein sopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_1193 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CH59_1196 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CH59_2087 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CH59_2086 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CH59_1778 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CH59_972 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CH59_315 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CH59_1231 fic/DOC family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CH59_2114 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ypw03400]
D CH59_3800 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CH59_3577 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CH59_3587 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CH59_913 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CH59_3882 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CH59_1299 mutator mutT family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CH59_2141 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CH59_2165 methylated-DNA--[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CH59_4348 uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CH59_3331 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CH59_2031 tag; DNA-3-methyladenine glycosylase I family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CH59_2146 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CH59_3955 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CH59_538 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CH59_1657 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D CH59_974 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CH59_3080 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2135 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CH59_2112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CH59_1541 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CH59_690 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CH59_3300 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CH59_1776 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CH59_1670 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CH59_1669 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CH59_2325 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CH59_2133 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CH59_212 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CH59_2695 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CH59_1490 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D CH59_1075 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D CH59_280 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CH59_3200 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CH59_2885 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CH59_800 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_4385 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CH59_2053 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CH59_2605 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CH59_3481 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CH59_230 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CH59_771 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CH59_2943 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CH59_1434 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D CH59_3385 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_2246 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_4035 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_843 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CH59_846 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D CH59_842 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CH59_2742 recA; protein RecA K03553 recA; recombination protein RecA
D CH59_4066 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CH59_4065 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CH59_4067 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CH59_2202 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CH59_2938 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
D CH59_2853 exonuclease SbcC family protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CH59_2854 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D CH59_1419 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CH59_2052 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D CH59_2130 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CH59_3605 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CH59_2945 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CH59_747 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CH59_2815 rdgC; recombination-associated protein rdgC K03554 rdgC; recombination associated protein RdgC
D CH59_9 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CH59_576 DEAD/DEAH box helicase family protein K19789 radD; DNA repair protein RadD
D CH59_2263 ftsK/SpoIIIE family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CH59_628 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CH59_2051 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CH59_3902 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CH59_1655 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D CH59_2905 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CH59_2407 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CH59_4261 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D CH59_447 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CH59_1768 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CH59_3945 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D CH59_2831 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CH59_1550 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CH59_1342 DNA polymerase family B, exonuclease domain protein K02336 polB; DNA polymerase II [EC:2.7.7.7]
D CH59_274 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D CH59_2743 recX; regulatory protein recX K03565 recX; regulatory protein
D CH59_1815 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D CH59_401 helD; helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D CH59_4051 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CH59_638 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CH59_3528 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_630 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CH59_631 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CH59_3527 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ypw03029]
D CH59_2551 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CH59_4266 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CH59_814 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CH59_2295 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_1678 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_2294 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CH59_3604 era; GTP-binding protein Era K03595 era; GTPase
D CH59_4198 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CH59_3483 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CH59_4070 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CH59_4077 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CH59_1540 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CH59_807 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D CH59_1391 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CH59_745 grpE family protein K03687 GRPE; molecular chaperone GrpE
D CH59_1514 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CH59_1515 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CH59_1390 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CH59_3176 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3982 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3179 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D CH59_4212 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D CH59_315 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CH59_2891 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CH59_2059 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ypw02000]
D CH59_1092 ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CH59_3707 ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CH59_1093 ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CH59_3708 ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CH59_445 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CH59_2916 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CH59_2917 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CH59_3873 ABC transporter family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D CH59_3870 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D CH59_2188 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CH59_3461 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CH59_3431 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CH59_1867 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CH59_470 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CH59_469 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CH59_477 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CH59_3068 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CH59_421 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D CH59_3053 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D CH59_2173 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CH59_3054 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CH59_3055 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CH59_3056 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CH59_2174 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D CH59_701 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CH59_700 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CH59_699 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CH59_704 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D CH59_2274 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D CH59_2276 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D CH59_2275 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CH59_2379 putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CH59_2381 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D CH59_2382 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CH59_3117 yfuA; yfuA K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3017 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3020 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D CH59_3116 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D CH59_3021 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D CH59_3115 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CH59_3022 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CH59_1338 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D CH59_1339 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D CH59_1340 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D CH59_513 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D CH59_510 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D CH59_511 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D CH59_512 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D CH59_3229 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CH59_4096 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CH59_3231 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CH59_4095 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CH59_3230 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CH59_4094 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CH59_3226 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CH59_4093 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CH59_3524 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CH59_3525 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D CH59_3526 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CH59_644 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D CH59_646 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D CH59_645 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CH59_3815 bacterial extracellular solute-binding s, 3 family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CH59_3814 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CH59_1626 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D CH59_1627 binding--dependent transport system inner membrane component family protein K10109 malF; maltose/maltodextrin transport system permease protein
D CH59_1628 binding--dependent transport system inner membrane component family protein K10110 malG; maltose/maltodextrin transport system permease protein
D CH59_1009 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_20 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1624 malK; maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_3265 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_2577 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1256 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_1010 bacterial extracellular solute-binding family protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CH59_1011 binding--dependent transport system inner membrane component family protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CH59_1012 binding--dependent transport system inner membrane component family protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CH59_3866 periplasmic binding domain protein K10537 araF; L-arabinose transport system substrate-binding protein
D CH59_3864 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D CH59_3865 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D CH59_115 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D CH59_112 binding--dependent transport system inner membrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D CH59_113 binding--dependent transport system inner membrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D CH59_114 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D CH59_331 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CH59_329 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D CH59_330 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D CH59_1990 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D CH59_1988 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D CH59_1989 ccmA; heme ABC exporter, ATP-binding protein CcmA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D CH59_38 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_906 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_1910 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D CH59_36 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_908 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_1911 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D CH59_37 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_907 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_1912 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CH59_1849 ytfQ; ABC transporter periplasmic-binding protein ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CH59_1845 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D CH59_1847 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D CH59_1848 ccmA; heme ABC exporter, ATP-binding protein CcmA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CH59_2731 periplasmic binding domain protein K17202 eryG; erythritol transport system substrate-binding protein
D CH59_2734 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D CH59_2733 ccmA; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D CH59_1006 periplasmic binding domain protein K17205 xltC; putative xylitol transport system substrate-binding protein
D CH59_1007 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D CH59_1008 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D CH59_3452 periplasmic binding domain protein K17208 ibpA; inositol transport system substrate-binding protein
D CH59_3455 branched-chain amino acid transport system / permease component family protein K17209 iatP; inositol transport system permease protein
D CH59_1731 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CH59_1730 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CH59_1729 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CH59_1728 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CH59_1452 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D CH59_1450 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D CH59_1451 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D CH59_1449 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D CH59_2474 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CH59_2473 putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CH59_2472 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CH59_2475 putative phospholipid-binding protein mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D CH59_2476 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D CH59_2574 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CH59_17 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CH59_3268 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CH59_1253 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CH59_1252 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CH59_16 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CH59_2575 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CH59_3267 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CH59_1251 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CH59_15 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CH59_2576 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CH59_3266 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CH59_2388 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CH59_321 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CH59_550 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CH59_2721 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CH59_3353 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CH59_286 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_2375 rbsD / FucU transport family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_2390 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_2391 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_548 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_2717 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_2718 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_3351 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_3354 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CH59_284 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_285 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_549 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_2389 ccmA; heme ABC exporter, ATP-binding protein CcmA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_2719 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_3352 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CH59_2074 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_2857 pstS; phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CH59_2073 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CH59_3236 binding--dependent transport system inner membrane component family protein K02037 pstC; phosphate transport system permease protein
D CH59_2072 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CH59_3237 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CH59_2071 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CH59_3238 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CH59_660 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CH59_658 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D CH59_659 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D CH59_661 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CH59_3663 hisM; histidine transport system permease protein hisM K10015 hisM; histidine transport system permease protein
D CH59_3662 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D CH59_3664 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3661 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D CH59_49 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D CH59_50 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D CH59_51 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_503 bacterial extracellular solute-binding s, 3 family protein K09996 artJ; arginine transport system substrate-binding protein
D CH59_491 lysine-arginine-ornithine-binding periplasmic family protein K09997 artI; arginine transport system substrate-binding protein
D CH59_493 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D CH59_492 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D CH59_490 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3488 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CH59_3486 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D CH59_3487 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CH59_3485 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3320 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CH59_3319 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D CH59_3318 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D CH59_1743 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CH59_1742 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D CH59_1741 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D CH59_1740 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CH59_1739 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CH59_526 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D CH59_787 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CH59_524 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D CH59_786 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D CH59_525 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D CH59_785 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CH59_656 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D CH59_655 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D CH59_654 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D CH59_653 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CH59_652 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D CH59_691 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein
D CH59_2068 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CH59_2805 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CH59_2066 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CH59_2067 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CH59_2806 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CH59_2807 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CH59_2808 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CH59_3938 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_4170 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CH59_3937 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CH59_3936 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CH59_3935 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CH59_3934 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CH59_1951 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D CH59_1950 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D CH59_1949 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D CH59_1948 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D CH59_1947 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D CH59_4186 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D CH59_4187 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D CH59_4188 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D CH59_4189 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D CH59_4190 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D CH59_3539 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CH59_2597 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CH59_3540 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CH59_2596 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CH59_3541 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CH59_2595 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CH59_3542 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CH59_2594 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CH59_3543 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CH59_569 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D CH59_570 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein
D CH59_571 yejE; inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein
D CH59_572 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D CH59_2657 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D CH59_2658 fhuB; iron(3+)-hydroxamate import system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D CH59_2656 fhuC; iron(3+)-hydroxamate import ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D CH59_1580 hmuT; hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein
D CH59_1581 fecCD transport family protein K25133 hmuU; heme transport system permease protein
D CH59_1582 hmuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CH59_1162 periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D CH59_302 periplasmic binding family protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CH59_303 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D CH59_304 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D CH59_305 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CH59_1974 periplasmic binding family protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CH59_1976 fecCD transport family protein K25283 yclO; iron-siderophore transport system permease protein
D CH59_1975 fecCD transport family protein K25284 yclN; iron-siderophore transport system permease protein
D CH59_1978 ABC transporter family protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CH59_533 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CH59_910 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CH59_498 ABC 3 transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CH59_532 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CH59_497 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CH59_531 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CH59_2663 periplasmic binding family protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D CH59_4259 fecCD transport family protein K06073 btuC; vitamin B12 transport system permease protein
D CH59_4257 ABC transporter family protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D CH59_4062 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D CH59_4064 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D CH59_4063 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CH59_4272 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D CH59_4274 ABC 3 transport family protein K11605 sitC; manganese/iron transport system permease protein
D CH59_4275 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D CH59_4273 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D CH59_2607 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D CH59_2608 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D CH59_2466 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CH59_209 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D CH59_211 lolC; lipo-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D CH59_210 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CH59_3624 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D CH59_3623 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D CH59_3622 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D CH59_3621 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CH59_1747 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D CH59_1748 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CH59_2643 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CH59_2642 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CH59_339 macB-like periplasmic core domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CH59_2988 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CH59_3740 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CH59_341 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CH59_2987 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CH59_3743 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CH59_4237 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CH59_3857 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CH59_1106 transporter, divalent anion:Na+ symporter family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CH59_4222 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CH59_257 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CH59_271 lacY; lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D CH59_1335 major Facilitator Superfamily protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D CH59_672 lacY proton/sugar symporter family protein K11537 xapB; MFS transporter, NHS family, xanthosine permease
D CH59_1394 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CH59_3052 putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D CH59_1019 major Facilitator Superfamily protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CH59_1286 major Facilitator Superfamily protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CH59_3399 hpaX; 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D CH59_249 major Facilitator Superfamily protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D CH59_3169 lacY proton/sugar symporter family protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D CH59_1957 phosphoglycerate transporter family protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D CH59_1071 major Facilitator Superfamily protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D CH59_2897 ampG; protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CH59_574 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CH59_3974 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CH59_2001 mdfA; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D CH59_4084 sugar (and other) transporter family protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D CH59_1066 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CH59_2795 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CH59_122 major Facilitator Superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D CH59_3222 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D CH59_2972 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CH59_3851 ynfM; inner membrane transport protein ynfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CH59_170 yihN; inner membrane protein yihN K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D CH59_461 sugar (and other) transporter family protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D CH59_3709 major Facilitator Superfamily protein K05373 ybtX; MFS transporter, putative signal transducer
D CH59_2255 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D CH59_1 sugar (and other) transporter family protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D CH59_3075 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CH59_1077 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D CH59_3076 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CH59_2461 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D CH59_1456 ptsP; phosphoenolpyruvate-protein phosphotransferase K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D CH59_546 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D CH59_3074 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CH59_228 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D CH59_1015 PTS system, glucose-like IIB component domain protein K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199]
D CH59_3505 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CH59_2453 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CH59_544 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CH59_1458 frwB; fructose-like phosphotransferase enzyme IIB component 2 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CH59_1460 PTS system, Fru family, IIB component domain protein K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CH59_1457 PTS system, Fru family, IIC component domain protein K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D CH59_2026 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CH59_3560 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CH59_3558 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CH59_3559 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CH59_3409 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CH59_3410 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D CH59_3411 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D CH59_1030 PTS system fructose IIA component family protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CH59_1033 PTS system, mannose/fructose/sorbose, IIB component family protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CH59_1032 PTS system sorbose-specific iic component family protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CH59_1031 PTS system mannose/fructose/sorbose IID component family protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CH59_105 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CH59_106 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CH59_3669 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D CH59_2463 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D CH59_2185 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CH59_3555 trkA-N domain protein K10716 kch; voltage-gated potassium channel
D CH59_2924 amt; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D CH59_4196 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CH59_529 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CH59_2486 putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D CH59_3061 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D CH59_457 focA; formate transporter FocA K06212 focA; formate transporter
D CH59_2251 putative nitrite transporter K02598 nirC; nitrite transporter
D CH59_2329 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CH59_2937 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D CH59_1500 mechanosensitive ion channel family protein K22051 mscM; miniconductance mechanosensitive channel
D CH59_945 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D CH59_10 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D CH59_3233 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CH59_3552 yut; urea transporter K08717 utp; urea transporter
D CH59_1116 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_174 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_1115 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D CH59_173 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CH59_1183 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D CH59_1181 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D CH59_729 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D CH59_728 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D CH59_1772 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CH59_4169 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D CH59_3469 crcB; protein CrcB K06199 crcB; fluoride exporter
D CH59_3556 crcB-like family protein K06199 crcB; fluoride exporter
D CH59_3557 crcB-like family protein K06199 crcB; fluoride exporter
D CH59_2519 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CH59_2756 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CH59_429 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D CH59_639 gram-negative porin family protein K11929 phoE; outer membrane pore protein E
D CH59_621 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D CH59_1016 lamB porin family protein K02024 lamB; maltoporin
D CH59_1623 lamB; maltoporin K02024 lamB; maltoporin
D CH59_406 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CH59_43 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D CH59_3167 ail; attachment invasion locus protein K16078 ail; attachment invasion locus protein
D CH59_3631 outer membrane transport family protein K06076 fadL; long-chain fatty acid transport protein
D CH59_3131 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_539 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_125 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_139 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D CH59_1822 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_4378 caf1A; F1 capsule-anchoring protein K07347 fimD; outer membrane usher protein
D CH59_3715 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_1857 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D CH59_1868 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D CH59_1869 hasR; hasR protein K16152 hasR; heme acquisition protein HasR
D CH59_3700 TonB-dependent siderophore receptor family protein K15721 fyuA; pesticin/yersiniabactin receptor
D CH59_301 TonB-dependent siderophore receptor family protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D CH59_530 tonB dependent receptor family protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CH59_2709 tonB dependent receptor family protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CH59_1578 shuA; outer membrane heme receptor ShuA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CH59_2256 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CH59_852 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CH59_869 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CH59_909 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CH59_3414 fcuA; ferrichrome receptor fcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_2566 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CH59_807 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D CH59_3196 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D CH59_3006 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC
D CH59_2779 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D CH59_748 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D CH59_2521 surface antigen variable number repeat family protein K07278 tamA; translocation and assembly module TamA
D CH59_2522 hypothetical protein K09800 tamB; translocation and assembly module TamB
D CH59_1944 kdgM; oligogalacturonate-specific porin kdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D CH59_116 kdgM; oligogalacturonate-specific porin kdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D CH59_2467 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D CH59_2468 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D CH59_1366 lptD; LPS-assembly protein lptD K04744 lptD; LPS-assembly protein
D CH59_3482 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D CH59_4468 yopB; protein yopB K23475 yopB; transloator
D CH59_4467 yopD; protein yopD K23476 yopD; transloator
D CH59_1528 subB; subtilase cytotoxin, subunit B K19298 subB; subtilase cytotoxin, subunit B
D CH59_3490 corC; magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D CH59_324 lrgA family protein K06518 cidA; holin-like protein
D CH59_616 MFS/sugar transport family protein K16210 togT; oligogalacturonide transporter
D CH59_534 amino acid permease family protein K11733 lysP; lysine-specific permease
D CH59_2627 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D CH59_3422 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D CH59_2859 amino acid permease family protein K11736 proY; proline-specific permease ProY
D CH59_3307 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D CH59_3733 amino acid permease family protein K11738 ansP; L-asparagine permease
D CH59_1967 amino acid permease family protein K16234 hutT; histidine transporter
D CH59_3794 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CH59_643 adiC; arginine/agmatine antiporter K03759 adiC; arginine:agmatine antiporter
D CH59_1209 amino acid permease family protein K16263 yjeH; amino acid efflux transporter
D CH59_718 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CH59_2170 fieF; ferrous-iron efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D CH59_2565 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2933 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_862 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_3027 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18324 acrD; multidrug efflux pump
D CH59_3224 acrB/AcrD/AcrF family protein K07788 mdtB; multidrug efflux pump
D CH59_3223 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D CH59_4163 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump
D CH59_1507 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CH59_4053 small Multidrug Resistance family protein K11742 mdtI; spermidine export protein MdtI
D CH59_4054 mdtJ; spermidine export mdtJ domain protein K11743 mdtJ; spermidine export protein MdtJ
D CH59_3569 eamA-like transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CH59_44 rhtA; inner membrane transporter rhtA K11939 rhtA; inner membrane transporter RhtA
D CH59_1530 RhaT L-rhamnose-proton symporter family protein K02856 rhaT; L-rhamnose-H+ transport protein
D CH59_1771 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CH59_4251 small Multidrug Resistance family protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D CH59_1097 transporter, gluconate:H+ symporter family protein K16321 gntP; high-affinity gluconate transporter
D CH59_1902 gntT; high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CH59_1927 citrate transporter family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CH59_1518 dcuA; anaerobic C4-dicarboxylate transporter dcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CH59_2767 anaerobic c4-dicarboxylate membrane transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CH59_676 transporter, betaine/carnitine/choline transporter family protein K02168 betT; choline/glycine/proline betaine transport protein
D CH59_3755 chaA; calcium/proton exchanger family protein K07300 chaA; Ca2+:H+ antiporter
D CH59_2471 sodium/calcium exchanger family protein K07301 yrbG; cation:H+ antiporter
D CH59_1915 phosphate transporter family protein K16322 pit; low-affinity inorganic phosphate transporter
D CH59_2410 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D CH59_3313 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D CH59_1612 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D CH59_1609 dicarboxylate symporter family protein K11102 gltP; proton glutamate symport protein
D CH59_1941 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CH59_1279 dicarboxylate symporter family protein K07862 sstT; serine/threonine transporter
D CH59_2129 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CH59_1389 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CH59_3978 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D CH59_2385 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CH59_2283 transporter, monovalent cation:proton antiporter-2 family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D CH59_2282 NADPH-dependent FMN reductase family protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D CH59_2971 transporter, monovalent cation:proton antiporter-2 family protein K26735 KEA4_5_6; K+:H+ antiporter
D CH59_1695 potassium uptake, TrkH family protein K03498 trkH; trk/ktr system potassium uptake protein
D CH59_2330 trkA; trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D CH59_2128 pbuX; xanthine permease family protein K16345 xanP; xanthine permease XanP
D CH59_2064 putative adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease
D CH59_2384 putative permease yjcD K06901 pbuG; adenine/guanine/hypoxanthine permease
D CH59_3093 na+ dependent nucleoside transporter family protein K11535 nupC; nucleoside transport protein
D CH59_635 aromatic amino acid transport family protein K03834 tyrP; tyrosine-specific transport protein
D CH59_558 aromatic amino acid transport family protein K03835 mtr; tryptophan-specific transport protein
D CH59_522 stp; serine transporter family protein K03837 sdaC; serine transporter
D CH59_1584 yhjV; inner membrane transport protein YhjV K26603 yhjV; inner membrane transport protein
D CH59_2660 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D CH59_3846 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D CH59_3553 transition metal uptake transporter, Ni2+-Co2+ transporter family protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D CH59_4099 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D CH59_3094 mntH; manganese transport protein mntH K03322 mntH; manganese transport protein
D CH59_2702 arsB; arsenite/antimonite efflux pump membrane family protein K03893 arsB; arsenical pump membrane protein
D CH59_1801 wzxE; protein wzxE K16693 wzxE; enterobacterial common antigen flippase
D CH59_4081 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CH59_1726 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D CH59_3198 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D CH59_2096 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D CH59_946 lysE; L-lysine exporter family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CH59_1766 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D CH59_1767 rhtC; threonine efflux protein K05835 rhtC; threonine efflux protein
D CH59_1377 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D CH59_2799 ygaZ; inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D CH59_2798 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D CH59_2442 fusaric acid resistance family protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D CH59_1247 fusaric acid resistance family protein K15547 mdtO; multidrug resistance protein MdtO
D CH59_3000 hypothetical protein K03548 perM; putative permease
D CH59_1757 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CH59_4270 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D CH59_1310 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CH59_3413 hypothetical protein K23242 mntP; manganese efflux pump family protein
D CH59_3737 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D CH59_3312 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D CH59_3311 imelysin family protein K07224 efeO; iron uptake system component EfeO
D CH59_3310 Dyp-type peroxidase family protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CH59_3738 fe2+ transport family protein K07230 p19; periplasmic iron binding protein
D CH59_3171 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D CH59_1865 hypothetical protein K03832 tonB; periplasmic protein TonB
D CH59_3926 hypothetical protein K03832 tonB; periplasmic protein TonB
D CH59_725 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CH59_727 tolA; protein TolA K03646 tolA; colicin import membrane protein
D CH59_726 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D CH59_3111 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CH59_2724 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CH59_3110 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D CH59_2725 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D CH59_3109 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D CH59_2726 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D CH59_1069 molybdopterin oxidoreductase family protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D CH59_2796 efflux pump membrane family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D CH59_1246 efflux transporter, RND family, MFP subunit K15549 mdtN; membrane fusion protein, multidrug efflux system
D CH59_1866 type I secretion membrane fusion, HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D CH59_3872 hlyD secretion family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D CH59_2192 cvaA; colicin V secretion protein CvaA K13408 cvaA; membrane fusion protein
D CH59_2564 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2934 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_702 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D CH59_3225 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D CH59_478 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CH59_3069 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CH59_2441 efflux transporter, RND family, MFP subunit K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D CH59_719 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D CH59_2225 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CH59_2224 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CH59_2223 feoC; ferrous iron transport protein C K07490 feoC; ferrous iron transport protein C
D CH59_1918 uspB; universal stress protein B K06144 uspB; universal stress protein B
D CH59_3626 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D CH59_3770 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CH59_178 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CH59_3382 copper resistance D family protein K07245 pcoD; copper resistance protein D
D CH59_3383 yobA; protein YobA K07156 copC; copper resistance protein C
D CH59_3968 mipA; mltA-interacting protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ypw02044]
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_3873 ABC transporter family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D CH59_3870 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D CH59_3872 hlyD secretion family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D CH59_1867 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CH59_1866 type I secretion membrane fusion, HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D CH59_2192 cvaA; colicin V secretion protein CvaA K13408 cvaA; membrane fusion protein
D CH59_2188 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CH59_1045 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D CH59_1046 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D CH59_1047 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CH59_1049 type II secretion system (T2SS), F family protein K02455 gspF; general secretion pathway protein F
D CH59_1050 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D CH59_1051 hypothetical protein K02457 gspH; general secretion pathway protein H
D CH59_1052 type II secretion system (T2SS), I family protein K02458 gspI; general secretion pathway protein I
D CH59_1053 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D CH59_1054 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D CH59_1055 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D CH59_1057 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D CH59_1058 bacterial chaperone lipo family protein K02465 gspS; general secretion pathway protein S
D CH59_3191 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D CH59_926 twitching motility family protein K02669 pilT; twitching motility protein PilT
D CH59_1168 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CH59_1169 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D CH59_1170 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D CH59_1173 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D CH59_1174 ATP synthase alpha/beta family, nucleotide-binding domain protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CH59_1175 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D CH59_1176 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D CH59_1177 TPR repeat family protein K12512 tadD; tight adherence protein D
D CH59_1178 tadE-like family protein K12513 tadE; tight adherence protein E
D CH59_1179 putative tight adherance operon protein K12514 tadF; tight adherence protein F
D CH59_1180 von Willebrand factor type A domain protein K12515 tadG; tight adherence protein G
D CH59_1081 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A
D CH59_849 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B
D CH59_847 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D CH59_2623 hypothetical protein K02682 ppdD; prepilin peptidase dependent protein D
D CH59_2622 type II/IV secretion system family protein K02504 hofB; protein transport protein HofB
D CH59_2621 type II secretion system (T2SS), F family protein K02505 hofC; protein transport protein HofC
D CH59_2238 putative ATPases of the HSP70 class involved in cell division K12288 hofM; pilus assembly protein HofM
D CH59_2239 fimbrial assembly family protein K12289 hofN; pilus assembly protein HofN
D CH59_2240 hypothetical protein K12290 hofO; pilus assembly protein HofO
D CH59_2241 hypothetical protein K12291 hofP; pilus assembly protein HofP
D CH59_2242 pilQ; type IV pilus secretin PilQ family protein K02507 hofQ; protein transport protein HofQ
D CH59_923 YGGT family protein K02221 yggT; YggT family protein
D CH59_2909 competence ComEA helix-hairpin-helix repeat region domain protein K02237 comEA; competence protein ComEA
D CH59_446 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D CH59_1606 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D CH59_4400 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D CH59_4401 type III secretion apparatus protein, YscD/HrpQ family K03220 yscD; type III secretion protein D
D CH59_1605 type III secretion apparatus protein, YscD/HrpQ family K03220 yscD; type III secretion protein D
D CH59_4403 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D CH59_1602 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D CH59_4406 hypothetical protein K04053 yscI; type III secretion protein I
D CH59_4407 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D CH59_1599 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D CH59_4408 YOP s translocation K family protein K04054 yscK; type III secretion protein K
D CH59_4409 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D CH59_4480 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CH59_1595 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CH59_4481 type III secretion YscO family protein K04056 yscO; type III secretion protein O
D CH59_4482 type III secretion system needle length determinant K04057 yscP; type III secretion protein P
D CH59_4483 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D CH59_1592 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D CH59_4393 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D CH59_1591 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D CH59_4394 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D CH59_1590 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D CH59_4395 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D CH59_1589 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D CH59_4396 yscU; yop s translocation protein U K03229 yscU; type III secretion protein U
D CH59_1588 escU; escU K03229 yscU; type III secretion protein U
D CH59_4473 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D CH59_1596 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D CH59_4478 type III secretion regulator YopN/LcrE/InvE/MxiC K04058 yscW; type III secretion protein W
D CH59_4475 type III secretion protein, YscX family K04059 yscX; type III secretion protein X
D CH59_4399 type III secretion system chaperone, YscB family K04049 yscB; type III secretion protein B
D CH59_4402 hypothetical protein K04050 yscE; type III secretion protein E
D CH59_4404 type III secretion protein, YscG family K04051 yscG; type III secretion protein G
D CH59_4405 type III secretion effector, YopR family K04052 yscH; type III secretion protein H
D CH59_4410 yscM2; regulatory protein YscM2 K04055 yscM; type III secretion protein M
D CH59_4474 tetratricopeptide repeat family protein K04060 yscY; type III secretion protein Y
D CH59_1158 FHIPEP family protein K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_3375 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_1157 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_3376 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_1149 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_3335 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_1147 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D CH59_3337 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D CH59_1146 ATPase, FliI/YscN family protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_3338 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_1153 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3343 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3344 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CH59_1154 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_3345 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_1155 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_3346 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_1156 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_3347 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_973 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CH59_4434 yadA; adhesin yadA K12341 yadA; adhesin YadA
D CH59_453 hypothetical protein K12342 yadB_C; adhesin YadB/C
D CH59_454 coiled stalk of trimeric autotransporter adhesin family protein K12342 yadB_C; adhesin YadB/C
D CH59_1632 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_4080 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_4078 hemagluttinin repeat family protein K11016 shlA; hemolysin
D CH59_1633 shlA; hemolysin K11016 shlA; hemolysin
D CH59_357 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_2356 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_3609 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_1345 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D CH59_369 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_889 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_2351 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3608 type VI secretion system peptidoglycan-associated domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_1346 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3140 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D CH59_3139 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D CH59_888 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D CH59_2350 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D CH59_1347 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D CH59_3126 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D CH59_352 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D CH59_2347 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D CH59_1356 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D CH59_3127 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D CH59_353 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D CH59_1357 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D CH59_3614 lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D CH59_1358 lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D CH59_3136 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CH59_373 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CH59_887 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CH59_1618 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CH59_1360 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CH59_3135 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CH59_374 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CH59_886 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CH59_1619 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CH59_1361 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CH59_3125 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D CH59_1362 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D CH59_3137 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_367 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_891 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_1620 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_1359 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D CH59_365 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_2359 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_2368 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_894 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_1101 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_3610 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_1354 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CH59_350 lysozyme family protein K11905 K11905; type VI secretion system protein
D CH59_1617 lysozyme family protein K11905 K11905; type VI secretion system protein
D CH59_3138 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_351 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_2349 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_1348 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D CH59_3128 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_366 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_2352 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_1355 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D CH59_356 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D CH59_2355 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D CH59_2358 impA domain family protein K11911 vasL; type VI secretion system protein VasL
D CH59_349 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D CH59_2357 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D CH59_2348 putative fHA domain protein K11894 impI; type VI secretion system protein ImpI
D CH59_3613 impE family protein K11898 impE; type VI secretion system protein ImpE
D CH59_2354 hypothetical protein K11909 vasI; type VI secretion system protein VasI
D CH59_3129 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_124 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_127 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_1820 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_3717 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_138 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_1821 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_3131 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_539 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_125 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_139 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D CH59_1822 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_4378 caf1A; F1 capsule-anchoring protein K07347 fimD; outer membrane usher protein
D CH59_3715 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_136 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_140 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_135 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_1165 hypothetical protein K12518 papC; outer membrane usher protein PapC
D CH59_1996 hypothetical protein K12518 papC; outer membrane usher protein PapC
D CH59_1164 papD; chaperone protein papD K12519 papD; chaperone protein PapD
D CH59_1300 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CH59_2161 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CH59_2871 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CH59_1677 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CH59_2872 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CH59_2546 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CH59_1301 secretion monitor family protein K13301 secM; secretion monitor
D CH59_2320 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CH59_2758 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CH59_1749 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CH59_2870 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CH59_2059 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CH59_1713 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D CH59_1712 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D CH59_1711 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CH59_3470 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:ypw02042]
D CH59_1528 subB; subtilase cytotoxin, subunit B K19298 subB; subtilase cytotoxin, subunit B
D CH59_3836 zonular occludens toxin family protein K10954 zot; zona occludens toxin
D CH59_3822 zonular occludens toxin family protein K10954 zot; zona occludens toxin
D CH59_2428 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D CH59_2429 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D CH59_3788 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D CH59_4209 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D CH59_2519 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CH59_2756 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CH59_4078 hemagluttinin repeat family protein K11016 shlA; hemolysin
D CH59_1633 shlA; hemolysin K11016 shlA; hemolysin
D CH59_1632 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_4080 shlB; hemolysin transporter protein shlB K11017 shlB; hemolysin activation/secretion protein
D CH59_964 hypothetical protein K11068 hlyIII; hemolysin III
D CH59_4370 phospholipase D family protein K11009 ymt; murine toxin
C 02022 Two-component system [BR:ypw02022]
D CH59_2856 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CH59_2855 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CH59_3059 phoP; alkaline phosphatase synthesis K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CH59_204 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D CH59_203 phoP; alkaline phosphatase synthesis K07660 phoP; two-component system, OmpR family, response regulator PhoP
D CH59_2229 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CH59_2228 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CH59_3791 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D CH59_3792 hypothetical protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D CH59_2166 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D CH59_2167 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CH59_969 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CH59_968 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CH59_3221 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D CH59_3220 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D CH59_2537 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D CH59_2538 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D CH59_4126 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CH59_4125 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CH59_3571 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CH59_3570 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CH59_2492 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D CH59_1403 hypothetical protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D CH59_3071 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CH59_3070 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CH59_3756 histidine kinase family protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CH59_3029 bacterial regulatory s, luxR family protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D CH59_1958 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_1963 MASE1 family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D CH59_1964 uhpA; transcriptional regulatory protein uhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D CH59_263 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D CH59_627 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D CH59_624 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_625 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D CH59_626 rcsB; rcsB protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CH59_2667 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CH59_3301 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CH59_3720 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D CH59_1890 histidine kinase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CH59_2768 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CH59_2118 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CH59_2117 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CH59_3158 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D CH59_3160 AAA domain family protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D CH59_172 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CH59_158 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CH59_159 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CH59_1607 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D CH59_1608 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D CH59_1151 AAA domain family protein K10943 flrC; two-component system, response regulator FlrC
D CH59_3947 hnr; protein hnr K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:ypw02035]
D CH59_172 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CH59_171 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D CH59_160 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CH59_159 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CH59_158 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CH59_157 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D CH59_52 bdlA; biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D CH59_614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D CH59_163 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_1062 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CH59_2018 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D CH59_179 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_180 methyl-accepting chemotaxis (MCP) signaling domain protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D CH59_193 sensory box protein K03776 aer; aerotaxis receptor
D CH59_1147 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D CH59_3337 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D CH59_1146 ATPase, FliI/YscN family protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_3338 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CH59_3339 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CH59_3344 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CH59_1154 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_3345 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CH59_1155 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_3346 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CH59_1156 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_3347 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CH59_1158 FHIPEP family protein K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_3375 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CH59_1157 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_3376 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CH59_3374 flhE; flagellar protein flhE K03516 flhE; flagellar protein FlhE
D CH59_1148 fliG middle domain protein K02410 fliG; flagellar motor switch protein FliG
D CH59_3336 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CH59_1152 surface presentation of antigens family protein K02416 fliM; flagellar motor switch protein FliM
D CH59_3342 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CH59_1153 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_3343 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CH59_1149 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_3335 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CH59_1132 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D CH59_3360 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D CH59_1142 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CH59_3368 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CH59_1133 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D CH59_3361 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D CH59_3341 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D CH59_1118 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D CH59_1150 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CH59_3334 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CH59_1119 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D CH59_3340 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D CH59_1141 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CH59_3367 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CH59_1140 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CH59_3366 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CH59_1139 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CH59_3365 flgD; basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CH59_1135 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D CH59_3363 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D CH59_1134 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CH59_3362 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CH59_1131 rod binding family protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CH59_3359 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D CH59_1138 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D CH59_3364 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D CH59_1130 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CH59_3358 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CH59_1129 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CH59_3357 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CH59_1144 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D CH59_3370 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D CH59_3240 putative n-methylation of lysine residues in flagellin K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CH59_1123 hypothetical protein K02406 fliC; flagellin
D CH59_1124 hypothetical protein K02406 fliC; flagellin
D CH59_1125 hypothetical protein K02406 fliC; flagellin
D CH59_3324 hypothetical protein K02406 fliC; flagellin
D CH59_1122 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D CH59_3325 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CH59_1121 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CH59_3326 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CH59_3327 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D CH59_176 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D CH59_175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CH59_1117 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D CH59_3323 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CH59_1116 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_174 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CH59_1115 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D CH59_173 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CH59_1151 AAA domain family protein K10943 flrC; two-component system, response regulator FlrC
D CH59_3320 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CH59_3322 fliZ; flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D CH59_1143 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CH59_3369 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CH59_926 twitching motility family protein K02669 pilT; twitching motility protein PilT
D CH59_3191 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D CH59_1168 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CH59_1169 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D CH59_1170 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D CH59_1173 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D CH59_1174 ATP synthase alpha/beta family, nucleotide-binding domain protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CH59_3129 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_124 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_127 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_1820 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_3717 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D CH59_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_138 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_1821 hypothetical protein K07346 fimC; fimbrial chaperone protein
D CH59_3131 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_539 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_125 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_139 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D CH59_1822 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_4378 caf1A; F1 capsule-anchoring protein K07347 fimD; outer membrane usher protein
D CH59_3715 hypothetical protein K07347 fimD; outer membrane usher protein
D CH59_136 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_140 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CH59_135 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ypw04812]
D CH59_2420 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CH59_1304 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CH59_1305 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CH59_4044 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CH59_4045 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CH59_4046 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CH59_4457 merR HTH regulatory family protein K03496 parA; chromosome partitioning protein
D CH59_4363 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D CH59_4362 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4353 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CH59_4456 sopB; protein sopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ypw04147]
D CH59_2946 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D CH59_2671 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CH59_3966 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CH59_943 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CH59_4059 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_4225 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CH59_2262 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CH59_2866 hypothetical protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CH59_1514 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CH59_1391 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CH59_1630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CH59_3201 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CH59_2295 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_1678 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CH59_225 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CH59_3857 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CH59_4048 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_1324 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CH59_2947 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CH59_1971 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CH59_2942 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CH59_1871 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CH59_256 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CH59_650 beta-eliminating lyase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CH59_2525 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CH59_709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CH59_1889 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CH59_2184 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CH59_2737 hypothetical protein K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CH59_2119 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CH59_1705 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CH59_3801 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CH59_555 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_950 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CH59_1652 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CH59_1864 glucose inhibited division A family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_2631 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CH59_4057 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CH59_2179 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CH59_713 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ypw02048]
D CH59_9 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CH59_8 cas3f; CRISPR-associated helicase Cas3, subtype I-F/YPEST K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CH59_7 csy1; CRISPR type I-F/YPEST-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D CH59_6 csy2; CRISPR type I-F/YPEST-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D CH59_5 csy3; CRISPR type I-F/YPEST-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D CH59_4 cas6f; CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D CH59_2246 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_4035 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CH59_4359 DNA methylase family protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CH59_1474 AAA domain family protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CH59_1473 mcrBC 5-methylcytosine restriction system component family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CH59_2365 toxin SymE, type I toxin-antitoxin system family protein K19048 symE; toxic protein SymE
D CH59_983 plasmid stabilization system family protein K06218 relE; mRNA interferase RelE/StbE
D CH59_2383 relB antitoxin family protein K07473 dinJ; DNA-damage-inducible protein J
D CH59_3103 hypothetical protein K18843 hicB; antitoxin HicB
D CH59_2928 hha; hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein
D CH59_2929 biofilm formation regulator YbaJ family protein K19162 tomB; hha toxicity modulator TomB
D CH59_4181 pspC; phage shock protein C K03973 pspC; phage shock protein C
D CH59_4182 pspB; phage shock protein B K03970 pspB; phage shock protein B
D CH59_4453 plasmid stabilization system family protein K19092 parE1_3_4; toxin ParE1/3/4
D CH59_4454 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D CH59_3332 death-on-curing family protein K07341 doc; death on curing protein
D CH59_985 mqsR; mRNA interferase MqsR K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D CH59_986 mqsA; antitoxin MqsA K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D CH59_2600 hypothetical protein K19334 tabA; biofilm protein TabA
D CH59_76 yhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA
D CH59_272 bssS family protein K12148 bssS; biofilm regulator BssS
D CH59_1304 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CH59_2420 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CH59_1193 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CH59_1196 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CH59_3088 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CH59_967 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D CH59_3176 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CH59_3982 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ypw01504]
D CH59_2001 mdfA; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D CH59_4126 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CH59_4125 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CH59_204 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D CH59_203 phoP; alkaline phosphatase synthesis K07660 phoP; two-component system, OmpR family, response regulator PhoP
D CH59_2564 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2934 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D CH59_2565 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2933 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_862 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D CH59_2566 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D CH59_2981 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CH59_1201 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D CH59_429 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ypw00536]
D CH59_28 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ypw00537]
D CH59_3801 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:ypw03200]
D CH59_4025 bacteriophage Rz lysis family protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ypw03100]
D CH59_3084 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_3086 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1648 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1691 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_2785 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CH59_1796 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2747 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2748 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_2749 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_3248 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_3619 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CH59_262 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_3712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_3435 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CH59_1851 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_779 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_770 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CH59_3297 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CH59_3497 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CH59_3495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CH59_1854 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_782 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_2103 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CH59_1495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_3298 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_977 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_1680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CH59_1795 tRNA-His K14226 tRNA-His; tRNA His
D CH59_1649 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_2784 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_1692 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CH59_1436 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_1793 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_2547 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_2609 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3498 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3296 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CH59_3092 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_722 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_723 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_3306 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CH59_721 tRNA-OTHER K14229 tRNA-Lys; tRNA Lys
D CH59_1222 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_3496 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_3499 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_2548 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_839 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_838 tRNA-Met K14230 tRNA-Met; tRNA Met
D CH59_1525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CH59_904 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CH59_1792 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_1955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_582 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CH59_4088 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_4098 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_393 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_619 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_2746 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CH59_1643 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1679 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1682 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_618 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CH59_1850 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CH59_1681 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CH59_3953 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CH59_4223 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_4224 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3089 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3091 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_3090 tRNA-Val K14237 tRNA-Val; tRNA Val
D CH59_1986 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CH59_2102 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_2783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1693 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CH59_1853 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2104 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_781 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_2786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1646 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CH59_1642 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_780 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1644 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_2105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1689 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CH59_1852 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CH59_74 short chain dehydrogenase family protein K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D CH59_1188 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CH59_3687 aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CH59_778 dkgB; 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D CH59_3883 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D CH59_283 iron-containing alcohol dehydrogenase family protein K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D CH59_3096 aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CH59_39 zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D CH59_2697 zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D CH59_1556 fibronectin type III domain protein K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D CH59_3 aldo/keto reductase family protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D CH59_1274 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D CH59_4281 solA; N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D CH59_1546 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CH59_184 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CH59_1194 flavodoxin-like fold family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CH59_3779 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CH59_2520 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CH59_3965 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CH59_2394 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CH59_2502 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D CH59_2417 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CH59_2728 prokaryotic cytochrome b561 family protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D CH59_2707 cytochrome c family protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CH59_3003 putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CH59_4173 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CH59_3045 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CH59_1904 putative quercetin 2,3-dioxygenase yhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CH59_3973 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CH59_3165 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D CH59_31 ring hydroxylating alpha subunit family protein K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D CH59_30 2Fe-2S iron-sulfur cluster binding domain protein K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D CH59_308 pyridine nucleotide-disulfide oxidoreductase family protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D CH59_3384 ferritin-like domain protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CH59_2639 multicopper oxidase family protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D CH59_2182 oxidoreductase NAD-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CH59_2998 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CH59_2592 4Fe-4S single cluster domain protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CH59_460 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CH59_483 hcr; NADH oxidoreductase hcr K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D CH59_2692 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CH59_4220 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CH59_46 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D CH59_3746 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D CH59_1575 hutW; putative heme utilization radical SAM enzyme HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D CH59_3489 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CH59_2570 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D CH59_2032 acetyltransferase family protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CH59_2603 acetyltransferase domain protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D CH59_1817 glutamine cyclotransferase family protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CH59_471 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CH59_1255 hypothetical protein K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D CH59_14 hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D CH59_2792 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D CH59_1078 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CH59_2834 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CH59_609 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D CH59_4244 putative phosphotransferase ydiA K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CH59_1211 glutamate-ammonia ligase adenylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CH59_4247 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CH59_1637 isocitrate dehydrogenase kinase/phosphatase family protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D CH59_730 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CH59_3910 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CH59_3635 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CH59_568 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D CH59_1945 diguanylate cyclase domain protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D CH59_1025 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D CH59_1037 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D CH59_3023 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D CH59_933 endonuclease I family protein K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D CH59_1710 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CH59_229 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CH59_1428 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CH59_3517 PGAP1-like family protein K01175 ybfF; esterase [EC:3.1.-.-]
D CH59_2825 alpha/beta hydrolase family protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D CH59_1946 bcsZ; endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D CH59_4026 a17; lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CH59_1013 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D CH59_156 N-acetylmuramoyl-L-alanine amidase family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CH59_2333 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CH59_259 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CH59_3562 ydjC-like family protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D CH59_3389 ASCH domain protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D CH59_2458 reactive intermediate/imine deaminase family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CH59_1238 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CH59_1212 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D CH59_2913 cof; HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D CH59_3035 nudK; GDP-mannose pyrophosphatase nudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D CH59_243 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D CH59_2092 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CH59_608 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D CH59_3888 fsa; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D CH59_1493 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CH59_1039 chondroitin ABC endolyase 1 K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D CH59_834 csdA; cysteine desulfurase, catalytic subunit CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D CH59_3308 nanM; N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D CH59_1539 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CH59_606 xylose isomerase-like TIM barrel family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D CH59_2526 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CH59_3879 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CH59_3877 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CH59_3876 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CH59_2840 nqrA; ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D CH59_2839 nqrB; ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D CH59_2838 nqrC; ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D CH59_2837 nqrD; ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D CH59_2836 nqrE; ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D CH59_3731 nqrE; ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D CH59_2835 nqrF; ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D CH59_1755 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CH59_177 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D CH59_2652 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D CH59_2015 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D CH59_3181 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D CH59_632 2Fe-2S iron-sulfur cluster binding domain protein K11107 yfaE; ferredoxin
D CH59_3880 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CH59_3881 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CH59_3875 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CH59_1522 4Fe-4S dicluster domain protein K05796 hydN; electron transport protein HydN
D CH59_2088 flavodoxin family protein K06205 mioC; MioC protein
D CH59_971 flavodoxin K03840 fldB; flavodoxin II
D CH59_3177 nifU; nifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CH59_2450 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D CH59_2729 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D CH59_3031 napD family protein K02570 napD; periplasmic nitrate reductase NapD
D CH59_3030 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D CH59_3514 flavodoxin K03839 fldA; flavodoxin I
D CH59_3034 periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
D CH59_1479 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D CH59_3529 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CH59_3078 cysZ; protein CysZ K06203 cysZ; CysZ protein
D CH59_798 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein
D CH59_4171 zinc carboxypeptidase family protein K14054 mpaA; murein peptide amidase A
D CH59_925 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CH59_3896 yciS; inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A
D CH59_3895 tetratricopeptide repeat family protein K19804 lapB; lipopolysaccharide assembly protein B
D CH59_459 glycosyltransferase 25 family protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CH59_1787 hemY family protein K02498 hemY; HemY protein
D CH59_1714 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D CH59_1715 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D CH59_1208 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D CH59_2569 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D CH59_2107 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D CH59_854 abgT transporter family protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D CH59_1191 multicopper oxidase family protein K04753 sufI; suppressor of ftsI
C 99999 Others
D CH59_1295 yqjF; inner membrane protein yqjF K15977 K15977; putative oxidoreductase
D CH59_2791 acetyltransferase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CH59_2446 hypothetical protein K03623 yhcO; ribonuclease inhibitor
D CH59_2398 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D CH59_2399 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D CH59_442 cspE; RNA chaperone K03704 cspA; cold shock protein
D CH59_476 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein
D CH59_3419 cspC; cold shock-like protein CspC K03704 cspA; cold shock protein
D CH59_3538 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D CH59_182 cspE; RNA chaperone K03704 cspA; cold shock protein
D CH59_3468 cspE; RNA chaperone K03704 cspA; cold shock protein
D CH59_1661 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D CH59_2918 nitrogen regulatory P-II family protein K04752 glnK; nitrogen regulatory protein P-II 2
D CH59_2226 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CH59_3772 hslJ; heat shock protein hslJ K03668 hslJ; heat shock protein HslJ
D CH59_475 ATP-dependent Clp protease adaptor ClpS family protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CH59_2901 tig; trigger factor K03545 tig; trigger factor
D CH59_2416 ferric reductase like transmembrane component family protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CH59_2010 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D CH59_3548 hypothetical protein K03187 ureE; urease accessory protein
D CH59_3549 ureF family protein K03188 ureF; urease accessory protein
D CH59_3550 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D CH59_3551 ureD urease accessory family protein K03190 ureD; urease accessory protein
D CH59_751 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CH59_3530 nrdH; glutaredoxin-like NrdH family protein K06191 nrdH; glutaredoxin-like protein NrdH
D CH59_1843 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein
D CH59_1235 thioredoxin family protein K07396 K07396; putative protein-disulfide isomerase
D CH59_1061 DSBA-like thioredoxin domain protein K07396 K07396; putative protein-disulfide isomerase
D CH59_2268 yhfA; protein yhfA K07397 yhfA; putative redox protein
D CH59_2219 nfuA; fe/S biogenesis protein nfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D CH59_1604 putative type III secretion apparatus K18984 ssaE; secretion system chaperone SsaE
C 99976 Replication and repair
D CH59_2927 methylated-DNA--[]-cysteine S-methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CH59_829 hypothetical protein K01146 xni; protein Xni
D CH59_2143 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D CH59_1717 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D CH59_480 AAA domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D CH59_2497 hypothetical protein K07460 yraN; putative endonuclease
D CH59_2571 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D CH59_2334 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D CH59_1225 hypothetical protein K07474 xtmA; phage terminase small subunit
D CH59_1226 terminase small subunit K07474 xtmA; phage terminase small subunit
D CH59_463 rarA; replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CH59_2336 topoisomerase DNA binding C4 zinc finger family protein K07479 yrdD; putative DNA topoisomerase
D CH59_987 zinc-binding domain of primase-helicase family protein K06919 K06919; putative DNA primase/helicase
D CH59_901 putative transposase K07480 insB; insertion element IS1 protein InsB
D CH59_2047 transposase family protein K07483 K07483; transposase
D CH59_1876 transposase family protein K07483 K07483; transposase
D CH59_2555 transposase family protein K07483 K07483; transposase
D CH59_867 transposase family protein K07483 K07483; transposase
D CH59_1110 transposase family protein K07483 K07483; transposase
D CH59_1880 helix-turn-helix domain protein K07483 K07483; transposase
D CH59_1999 transposase family protein K07483 K07483; transposase
D CH59_2211 transposase family protein K07483 K07483; transposase
D CH59_2345 transposase family protein K07483 K07483; transposase
D CH59_4430 transposase family protein K07483 K07483; transposase
D CH59_4432 putative iSPsy24 transposase K07483 K07483; transposase
D CH59_4460 transposase family protein K07483 K07483; transposase
D CH59_4372 transposase family protein K07486 K07486; transposase
D CH59_896 hypothetical protein K07489 K07489; transposase
D CH59_900 hypothetical protein K07489 K07489; transposase
D CH59_883 hypothetical protein K07489 K07489; transposase
D CH59_2187 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2296 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3073 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3087 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3145 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3156 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3172 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3203 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2397 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1136 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1166 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1167 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_317 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_407 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_417 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_434 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_473 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_578 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_620 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_671 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_681 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1668 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1697 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2632 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2754 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2755 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2763 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2777 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2860 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2865 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2873 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2882 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_752 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_823 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_825 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_941 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2907 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2995 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3007 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3651 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_103 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1038 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3789 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_227 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_234 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_244 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1506 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1788 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1916 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1917 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2017 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2113 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2480 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2510 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2616 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_2720 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3245 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4092 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4103 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3506 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3508 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_3372 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4227 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4228 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1243 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1281 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1321 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1327 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1373 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1381 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_1745 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4323 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4174 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_4001 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D CH59_107 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_2106 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_248 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_277 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3132 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3210 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3441 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3682 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3670 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_216 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_273 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_345 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4279 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4280 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3535 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3536 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4373 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4374 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3924 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3925 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3949 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3951 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3984 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3985 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4017 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4018 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_1818 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_1819 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_3277 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4140 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4142 transposase, Mutator family protein K07493 K07493; putative transposase
D CH59_4117 integrase core domain protein K07497 K07497; putative transposase
D CH59_3288 integrase core domain protein K07497 K07497; putative transposase
D CH59_2556 integrase core domain protein K07497 K07497; putative transposase
D CH59_866 integrase core domain protein K07497 K07497; putative transposase
D CH59_1108 integrase core domain protein K07497 K07497; putative transposase
D CH59_1472 transposase family protein K07497 K07497; putative transposase
D CH59_1881 integrase core domain protein K07497 K07497; putative transposase
D CH59_2210 integrase core domain protein K07497 K07497; putative transposase
D CH59_3272 putative transposase A K07497 K07497; putative transposase
D CH59_3519 transposase family protein K07497 K07497; putative transposase
D CH59_4411 transposase family protein K07497 K07497; putative transposase
D CH59_4413 integrase core domain protein K07497 K07497; putative transposase
D CH59_4416 integrase core domain protein K07497 K07497; putative transposase
D CH59_4428 HTH-like domain protein K07497 K07497; putative transposase
D CH59_4442 transposase family protein K07497 K07497; putative transposase
D CH59_4443 integrase core domain protein K07497 K07497; putative transposase
D CH59_4450 integrase core domain protein K07497 K07497; putative transposase
D CH59_4459 HTH-like domain protein K07497 K07497; putative transposase
D CH59_2049 integrase core domain protein K07497 K07497; putative transposase
D CH59_4412 putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D CH59_4429 integrase core domain protein K07497 K07497; putative transposase
D CH59_4438 putative transposase K07497 K07497; putative transposase
D CH59_2000 integrase core domain protein K07497 K07497; putative transposase
D CH59_2343 integrase core domain protein K07497 K07497; putative transposase
D CH59_4039 phage integrase family protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D CH59_4183 pspA; phage shock protein A K03969 pspA; phage shock protein A
D CH59_4180 phage shock PspD family protein K03971 pspD; phage shock protein D
D CH59_2944 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CH59_1797 putative transport protein YifK K03293 TC.AAT; amino acid transporter, AAT family
D CH59_32 transporter, betaine/carnitine/choline transporter family protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D CH59_4193 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CH59_3066 putative membrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CH59_2858 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CH59_769 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CH59_1427 nucleoside transporter, NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D CH59_2175 ybhI; inner membrane protein ybhI K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D CH59_517 AspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
D CH59_2039 AspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
C 99978 Cell growth
D CH59_3922 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D CH59_1758 dcrB; protein dcrB K27311 dcrB; inner membrane lipoprotein DcrB
D CH59_2514 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CH59_3976 spoVR like family protein K06415 spoVR; stage V sporulation protein R
D CH59_2157 peptidase M23 family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D CH59_223 hypothetical protein K07337 K07337; penicillin-binding protein activator
D CH59_404 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D CH59_126 hypothetical protein K15540 ecpD; chaperone protein EcpD
D CH59_3130 hypothetical protein K15540 ecpD; chaperone protein EcpD
D CH59_826 syd; protein syd K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D CH59_2626 ampE; protein AmpE K03807 ampE; AmpE protein
D CH59_1566 terD domain protein K05792 terA; tellurite resistance protein TerA
D CH59_1562 terD domain protein K05795 terD; tellurium resistance protein TerD
D CH59_1563 terD domain protein K05795 terD; tellurium resistance protein TerD
D CH59_1567 terD domain protein K05791 terZ; tellurium resistance protein TerZ
D CH59_131 proQ; proP effector K03607 proQ; ProP effector
D CH59_1919 uspA; universal stress protein A K06149 uspA; universal stress protein A
D CH59_3798 uspE; universal stress protein E K14055 uspE; universal stress protein E
D CH59_1719 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D CH59_3886 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D CH59_2120 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CH59_3492 ybeZ; phoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CH59_3754 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CH59_3969 hypothetical protein K07180 prkA; serine protein kinase
D CH59_1213 bacterial SH3 domain protein K07184 ygiM; SH3 domain protein
D CH59_1421 bacterial virulence factor hemolysin family protein K07186 smp; membrane protein
D CH59_2889 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CH59_465 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D CH59_4110 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D CH59_3630 putative phospholipid-binding lipoprotein mlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CH59_1808 wzzE; lipopolysaccharide biosynthesis protein wzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D CH59_1111 slyB; outer membrane lipoprotein slyB K06077 slyB; outer membrane lipoprotein SlyB
D CH59_4202 slyB; outer membrane lipoprotein slyB K06077 slyB; outer membrane lipoprotein SlyB
D CH59_2400 slyB; outer membrane lipoprotein slyB K06077 slyB; outer membrane lipoprotein SlyB
D CH59_806 outer membrane family protein K06142 hlpA; outer membrane protein
D CH59_2693 lysM domain protein K06194 nlpD; lipoprotein NlpD
D CH59_2558 nlpI; lipoprotein nlpI K05803 nlpI; lipoprotein NlpI
D CH59_3918 oprF membrane domain protein K07275 ompW; outer membrane protein
D CH59_2764 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D CH59_4049 outer membrane lipo, Slp family protein K07285 slp; outer membrane lipoprotein
D CH59_2898 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D CH59_312 asmA family protein K07289 asmA; AsmA protein
D CH59_1934 asmA family protein K07290 yhjG; AsmA family protein
D CH59_2982 ybbJ; inner membrane protein ybbJ K07340 ybbJ; inner membrane protein
D CH59_340 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CH59_4283 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D CH59_3891 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB
D CH59_970 inner membrane CreD family protein K06143 creD; inner membrane protein
D CH59_3625 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D CH59_3628 cytochrome C biogenesis family protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CH59_3192 helix-turn-helix family protein K15539 rodZ; cytoskeleton protein RodZ
D CH59_2440 hypothetical protein K21695 aaeX; protein AaeX
D CH59_1273 hdeD; protein hdeD K21908 hdeD; membrane protein HdeD
C 99994 Others
D CH59_2070 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CH59_2297 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D CH59_1565 tellurite resistance TerB family protein K05793 terB; tellurite resistance protein TerB
D CH59_1564 integral membrane, TerC family protein K05794 terC; tellurite resistance protein TerC
D CH59_1519 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D CH59_4075 cutC family protein K06201 cutC; copper homeostasis protein
D CH59_2585 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D CH59_1370 hypothetical protein K06195 apaG; ApaG protein
D CH59_1782 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D CH59_1579 hemS; hemin transport protein hemS K07225 hmuS; putative hemin transport protein
D CH59_1576 hypothetical protein K07227 chuX; heme iron utilization protein
D CH59_2936 ychN; protein ychN K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CH59_3658 colicin V production family protein K03558 cvpA; membrane protein required for colicin V production
D CH59_419 mce related family protein K06192 pqiB; paraquat-inducible protein B
D CH59_4082 hypothetical protein K03810 mviM; virulence factor
D CH59_2789 hypothetical protein K05811 yfiM; putative lipoprotein
D CH59_1431 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein
D CH59_4087 PHP domain protein K04477 ycdX; putative hydrolase
D CH59_3588 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D CH59_2661 erpA; iron-sulfur cluster insertion protein erpA K15724 erpA; iron-sulfur cluster insertion protein
D CH59_4239 iron-sulfur cluster assembly accessory family protein K05997 sufA; Fe-S cluster assembly protein SufA
D CH59_4238 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CH59_4236 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CH59_3025 ybcI; inner membrane protein ybcI K07038 K07038; inner membrane protein
D CH59_117 ydjM; inner membrane protein ydjM K07038 K07038; inner membrane protein
D CH59_1933 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein
D CH59_2122 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein
D CH59_1516 fxsA cytoplasmic membrane family protein K07113 fxsA; UPF0716 protein FxsA
D CH59_835 csdE; cysteine desulfurase, sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D CH59_4234 sufE; cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE
D CH59_4284 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D CH59_200 hflD; high frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein
D CH59_310 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF
D CH59_3618 lemA family protein K03744 lemA; LemA protein
D CH59_2286 slyX family protein K03745 slyX; SlyX protein
D CH59_2335 hypothetical protein K03747 smg; Smg protein
D CH59_1404 creA family protein K05805 creA; CreA protein
D CH59_934 peptidase MA superfamily protein K02742 sprT; SprT protein
D CH59_3657 sporulation related domain protein K03749 dedD; DedD protein
D CH59_2245 sporulation related domain protein K03112 damX; DamX protein
D CH59_328 hypothetical protein K03748 sanA; SanA protein
D CH59_3654 hypothetical protein K03975 dedA; membrane-associated protein
D CH59_420 integral membrane, PqiA family protein K03808 pqiA; paraquat-inducible protein A
D CH59_133 yebS; inner membrane protein yebS K03808 pqiA; paraquat-inducible protein A
D CH59_66 hypothetical protein K05594 elaB; ElaB protein
D CH59_4178 hypothetical protein K08990 ycjF; putative membrane protein
D CH59_1751 hypothetical protein K08993 yhhL; putative membrane protein
D CH59_3445 hypothetical protein K08996 yagU; putative membrane protein
D CH59_3948 SEC-C motif family protein K09858 K09858; SEC-C motif domain protein
D CH59_2926 type III secretion system lipochaperone family protein K09914 K09914; putative lipoprotein
D CH59_1622 maltose operon periplasmic family protein K05775 malM; maltose operon periplasmic protein
D CH59_1629 psiE; protein psiE K13256 psiE; protein PsiE
D CH59_3616 phnA Zinc-Ribbon family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CH59_861 hypothetical protein K06867 K06867; uncharacterized protein
D CH59_2711 hypothetical protein K06867 K06867; uncharacterized protein
D CH59_3591 ankyrin repeat family protein K06867 K06867; uncharacterized protein
D CH59_342 radical SAM additional 4Fe4S-binding SPASM domain protein K06871 K06871; uncharacterized protein
D CH59_3024 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D CH59_1026 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D CH59_3113 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D CH59_3204 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D CH59_3676 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D CH59_3289 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D CH59_584 DNase/tRNase domain of colicin-like bacteriocin family protein K06887 K06887; uncharacterized protein
D CH59_2505 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein
D CH59_4124 X-Pro dipeptidyl-peptidase family protein K06889 K06889; uncharacterized protein
D CH59_682 inhibitor of apoptosis-promoting Bax1 family protein K06890 K06890; uncharacterized protein
D CH59_3282 lysozyme family protein K06903 W; Bacteriophage baseplate protein W
D CH59_4179 hypothetical protein K06918 K06918; uncharacterized protein
D CH59_4361 archaeal ATPase family protein K06921 K06921; uncharacterized protein
D CH59_398 coA binding domain protein K06929 K06929; uncharacterized protein
D CH59_4205 hypothetical protein K06938 K06938; uncharacterized protein
D CH59_557 putative zinc-/iron-chelating domain protein K06940 K06940; uncharacterized protein
D CH59_118 dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D CH59_1197 hypothetical protein K07000 K07000; uncharacterized protein
D CH59_220 hypothetical protein K07000 K07000; uncharacterized protein
D CH59_581 type I phosphodiesterase / nucleotide pyrophosphatase family protein K07014 K07014; uncharacterized protein
D CH59_2272 alpha/beta hydrolase family protein K07019 K07019; uncharacterized protein
D CH59_1392 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D CH59_3009 neutral zinc metallopeptidase family protein K07054 K07054; uncharacterized protein
D CH59_2284 hypothetical protein K07070 K07070; uncharacterized protein
D CH59_3665 rmlD substrate binding domain protein K07071 K07071; uncharacterized protein
D CH59_3640 hypothetical protein K07090 K07090; uncharacterized protein
D CH59_3667 yfcE; phosphodiesterase yfcE K07095 K07095; uncharacterized protein
D CH59_2517 hypothetical protein K07109 K07109; uncharacterized protein
D CH59_1587 sulfur transport family protein K07112 K07112; uncharacterized protein
D CH59_2498 lppC lipofamily protein K07121 K07121; uncharacterized protein
D CH59_4139 sel1 repeat family protein K07126 K07126; uncharacterized protein
D CH59_4309 hypothetical protein K07128 K07128; uncharacterized protein
D CH59_4311 ABC transporter family protein K07128 K07128; uncharacterized protein
D CH59_4072 yecN; inner membrane protein yecN K07136 K07136; uncharacterized protein
D CH59_2491 radical SAM superfamily protein K07139 K07139; uncharacterized protein
D CH59_423 2Fe-2S iron-sulfur cluster binding domain protein K07140 K07140; MOSC domain-containing protein
D CH59_332 hypothetical protein K07148 K07148; uncharacterized protein
D CH59_2058 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CH59_922 hypothetical protein K09131 K09131; uncharacterized protein
D CH59_3473 hypothetical protein K09158 K09158; uncharacterized protein
D CH59_4040 putative zinc-/iron-chelating domain protein K09160 K09160; uncharacterized protein
D CH59_96 hypothetical protein K09161 K09161; uncharacterized protein
D CH59_3037 hypothetical protein K09768 K09768; uncharacterized protein
D CH59_3927 yciI; protein yciI K09780 K09780; uncharacterized protein
D CH59_3970 hypothetical protein K09786 K09786; uncharacterized protein
D CH59_2939 hypothetical protein K09790 K09790; uncharacterized protein
D CH59_441 trm112p-like family protein K09791 K09791; uncharacterized protein
D CH59_2155 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D CH59_2156 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D CH59_749 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D CH59_278 hypothetical protein K09802 K09802; uncharacterized protein
D CH59_3280 hypothetical protein K09803 K09803; uncharacterized protein
D CH59_947 hypothetical protein K09807 K09807; uncharacterized protein
D CH59_479 hypothetical protein K09824 virK; uncharacterized protein
D CH59_2833 hypothetical protein K05952 K05952; uncharacterized protein
D CH59_418 hypothetical protein K09857 K09857; uncharacterized protein
D CH59_1397 hypothetical protein K09861 K09861; uncharacterized protein
D CH59_2617 hypothetical protein K09862 K09862; uncharacterized protein
D CH59_1656 hypothetical protein K09891 K09891; uncharacterized protein
D CH59_2115 der GTPase activator family protein K09894 K09894; uncharacterized protein
D CH59_953 yecA family protein K09895 K09895; uncharacterized protein
D CH59_2109 yihD; protein yihD K09896 K09896; uncharacterized protein
D CH59_1844 hypothetical protein K09897 K09897; uncharacterized protein
D CH59_2271 hypothetical protein K09898 K09898; uncharacterized protein
D CH59_97 hypothetical protein K09899 K09899; uncharacterized protein
D CH59_3932 hypothetical protein K09901 K09901; uncharacterized protein
D CH59_4043 hypothetical protein K09902 K09902; uncharacterized protein
D CH59_580 hypothetical protein K09904 K09904; uncharacterized protein
D CH59_4076 yecM; protein yecM K09907 K09907; uncharacterized protein
D CH59_2482 hypothetical protein K09908 K09908; uncharacterized protein
D CH59_399 hypothetical protein K09909 K09909; uncharacterized protein
D CH59_2634 hypothetical protein K09910 K09910; uncharacterized protein
D CH59_408 organizer of macrodomain of Terminus of chromosome family protein K09911 K09911; uncharacterized protein
D CH59_261 hypothetical protein K09912 K09912; uncharacterized protein
D CH59_3964 hypothetical protein K09916 K09916; uncharacterized protein
D CH59_3393 hypothetical protein K09917 K09917; uncharacterized protein
D CH59_3390 yebG family protein K09918 K09918; uncharacterized protein
D CH59_1199 hypothetical protein K09920 K09920; uncharacterized protein
D CH59_1779 hypothetical protein K09921 K09921; uncharacterized protein
D CH59_915 hypothetical protein K09923 K09923; uncharacterized protein
D CH59_1484 hypothetical protein K09937 K09937; uncharacterized protein
D CH59_3219 hypothetical protein K09946 K09946; uncharacterized protein
D CH59_3081 hypothetical protein K09954 K09954; uncharacterized protein
D CH59_3083 hypothetical protein K09962 K09962; uncharacterized protein
D CH59_2979 traB family protein K09973 K09973; uncharacterized protein
D CH59_4155 hutD family protein K09975 K09975; uncharacterized protein
D CH59_3776 hypothetical protein K09978 K09978; uncharacterized protein
D CH59_2579 hypothetical protein K09979 K09979; uncharacterized protein
D CH59_3928 transcription factor zinc-finger family protein K09981 K09981; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 28, 2024