+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Zerene cesonia (dogface butterfly)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 119831504 mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 119830956 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 119830795 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E 119830232 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] D Cap binding complex E 119839801 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 119830037 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 119838552 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 119837498 cleavage and polyadenylation specificity factor subunit 6 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 119828770 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] D Cleavage and polyadenylation specificity factor (CPSF) complex E 119836625 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 119828797 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 119831876 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 119828304 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 119830097 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 119830483 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 119836294 serine/threonine-protein phosphatase PP1-beta-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 119832757 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 119835870 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] E 119833598 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 119839034 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 119837004 cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 119838144 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 119832791 symplekin K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 119830428 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 119832618 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 119828164 probable small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E 119840685 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 119837561 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 119830172 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E 119830578 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 119828797 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 119831876 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 119837004 cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 119832791 symplekin K06100 SYMPK; symplekin E 119830804 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 119830739 transcription elongation factor SPT4-like K15171 SUPT4H1; transcription elongation factor SPT4 E 119830854 transcription elongation factor SPT4-like K15171 SUPT4H1; transcription elongation factor SPT4 E 119828682 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 119837075 N6-adenosine-methyltransferase MT-A70-like protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 119840285 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 119831747 N(6)-adenine-specific methyltransferase METTL4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 119830802 RNA N6-adenosine-methyltransferase METTL16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 119839962 pre-mRNA-splicing regulator female-lethal(2)D K22824 WTAP; pre-mRNA-splicing regulator WTAP E 119828179 protein virilizer K22910 VIRMA; protein virilizer E 119831599 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15 E 119831058 E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 119835989 LOW QUALITY PROTEIN: poly(A) polymerase type 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 119839664 poly(A) RNA polymerase gld-2 homolog A-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing E 119838955 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1 E 119838059 RNA-binding protein 26-like K13192 RBM26; RNA-binding protein 26 E 119828247 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 E 119834986 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 E 119830112 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 119839048 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17 D 119840790 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 119832892 titin isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 119829309 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 119836517 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A E 119830355 protein mago nashi K12877 MAGOH; protein mago nashi E 119830384 protein mago nashi K12877 MAGOH; protein mago nashi E 119830729 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 119833546 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 119828851 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 119829049 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 119836910 protein CASC3-like isoform X1 K14323 CASC3; protein CASC3 E 119833743 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 119828465 pinin K13114 PNN; pinin E 119830761 RNA-binding protein with serine-rich domain 1-A-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 119831148 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 119828286 THO complex subunit 1 K12878 THOC1; THO complex subunit 1 E 119833185 THO complex subunit 2 K12879 THOC2; THO complex subunit 2 E 119837771 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 119830729 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 119830750 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5 E 119835292 THO complex subunit 6 K13175 THOC6; THO complex subunit 6 D TREX-2 complex E 119840507 PCI domain-containing protein 2 homolog K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 119828616 enhancer of yellow 2 transcription factor-like K11368 ENY2; enhancer of yellow 2 transcription factor E 119839358 caltractin-like K10840 CETN2; centrin-2 D Nuclear pore complex E 119840650 nucleoprotein TPR-like K09291 TPR; nucleoprotein TPR E 119836884 mRNA export factor K14298 RAE1; mRNA export factor E 119828853 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 119832660 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 119829707 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43 E 119833287 nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50 E 119830286 probable nucleoporin Nup54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 119836738 nuclear pore glycoprotein p62-like isoform X1 K14306 NUP62; nuclear pore complex protein Nup62 E 119836168 nucleoporin 88 K14318 NUP88; nuclear pore complex protein Nup88 E 119831329 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 119838444 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 119838446 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 119833747 nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107 E 119828686 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133 E 119829563 nucleoporin Nup188 K14311 NUP188; nuclear pore complex protein Nup188 E 119835389 nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153 E 119835246 nuclear pore complex protein Nup154 K14312 NUP155; nuclear pore complex protein Nup155 E 119831506 nucleoporin Nup35-like K14313 NUP35; nuclear pore complex protein Nup53 E 119831517 nucleoporin Nup35-like K14313 NUP35; nuclear pore complex protein Nup53 E 119830490 nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205 E 119840088 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210 E 119832248 nuclear pore complex protein Nup214-like isoform X1 K14317 NUP214; nuclear pore complex protein Nup214 E 119837415 nuclear pore complex protein Nup58-like K14307 NUPL1; nucleoporin p58/p45 E 119840081 nucleoporin-like protein amo1 K14321 NUPL2; nucleoporin-like protein 2 E 119838251 nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1 E 119832025 nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1 E 119830187 E3 SUMO-protein ligase RanBP2-like K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 119840241 LOW QUALITY PROTEIN: aladin-like K14320 AAAS; aladin E 119828848 nucleoporin Gle1 K18723 GLE1; nucleoporin GLE1 E 119828944 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 119832765 uncharacterized protein LOC119832765 isoform X1 K14284 NXF; nuclear RNA export factor E 119832783 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 119828650 NTF2-related export protein-like K14285 NXT1_2; NTF2-related export protein 1/2 E 119828651 NTF2-related export protein-like K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 119834946 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 119838419 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 119834369 ELAV-like protein 1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 119834440 ELAV-like protein 2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 119836627 ELAV-like protein 4 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 119836821 ELAV-like protein 4 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 119832815 ELAV-like protein 1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 119840041 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 119832099 transitional endoplasmic reticulum ATPase TER94 isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase E 119837260 protein-lysine methyltransferase METTL21D-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E 119834735 exportin-1 K14290 XPO1; exportin-1 E 119838892 exportin-7 K18460 XPO7; exportin-7 E 119839262 ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 119831071 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 119838648 eukaryotic translation initiation factor 4E type 2 K03259 EIF4E; translation initiation factor 4E E 119830252 eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E 119835848 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G E 119833297 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G E 119833298 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G E 119838333 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 119836251 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H E 119840103 eukaryotic translation initiation factor 4E-binding protein 3-like K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 119835401 eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 119835542 protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel E 119838965 fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein E 119838504 cytoplasmic FMR1-interacting protein isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein E 119833454 uncharacterized protein LOC119833454 isoform X1 K13133 GEMIN5; gem associated protein 5 E 119837582 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 119838439 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 119830032 putative ATP-dependent RNA helicase Pl10 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 119835868 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 119829501 polyadenylate-binding protein 1-A K13126 PABPC; polyadenylate-binding protein E 119831011 polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 119828512 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 119835618 deformed epidermal autoregulatory factor 1 isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 119837395 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 119830715 density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 119838616 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 119836069 heterogeneous nuclear ribonucleoprotein 87F-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 119838608 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 119835109 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi E 119839052 RNA-binding protein Musashi homolog Rbp6 K14411 MSI; RNA-binding protein Musashi E 119839581 heterogeneous nuclear ribonucleoprotein 27C isoform X1 K14411 MSI; RNA-binding protein Musashi E 119830265 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein E 119830266 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein E 119834746 protein pelota K06965 PELO; protein pelota E 119831627 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2 E 119833210 DEAD-box helicase Dbp80 isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 119828574 pre-mRNA-splicing factor syf1 homolog K12867 SYF1; pre-mRNA-splicing factor SYF1 E 119829044 SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein E 119835990 regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation E 119836635 la-related protein 6 K18733 LARP6; la-related protein 6 E 119837716 transcriptional activator protein Pur-beta isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 119835247 polymerase delta-interacting protein 3-like K22414 POLDIP3; polymerase delta-interacting protein 3 E 119837312 uncharacterized protein LOC119837312 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 119840654 leukocyte receptor cluster member 8 homolog K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 119838949 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 119832655 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3 E 119829113 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 119829648 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 119839922 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 119837762 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 119837753 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 119829868 uncharacterized protein LOC119829868 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 119837106 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 119828638 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 119828675 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 119828181 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 119839613 protein SMG5 K11125 SMG5; protein SMG5 E 119835197 uncharacterized protein LOC119835197 isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 119835285 telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 119830125 protein SMG7-like K14409 SMG7; protein SMG7 E 119839473 protein SMG8 K18734 SMG8; protein SMG8 E 119832965 protein SMG9-like isoform X1 K18735 SMG9; protein SMG9 E 119835868 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 119839716 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 119834749 GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 119832231 protein penguin K14844 PUF6; pumilio homology domain family member 6 E 119836361 unconventional myosin-Va K10357 MYO5; myosin V E 119831790 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 119836198 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 E 119833182 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 119832439 actin-5C-like K05692 ACTB_G1; actin beta/gamma 1 E 119834941 T-box transcription factor TBX6 K10180 TBX6; T-box protein 6 E 119830147 uncharacterized protein LOC119830147 K18741 NANOS1; protein nanos 1 E 119830786 uncharacterized protein LOC119830786 K18741 NANOS1; protein nanos 1 E 119830842 protein hairy-like K09090 HESN; hairy and enhancer of split, invertebrate E 119838676 uncharacterized protein LOC119838676 K09090 HESN; hairy and enhancer of split, invertebrate E 119840108 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 119840128 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 119840141 transcription factor HES-4-A-like K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 119836898 far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein E 119829450 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 119830043 elongation factor 1-alpha 2-like K03231 EEF1A; elongation factor 1-alpha E 119830537 elongation factor 1-alpha 2-like K03231 EEF1A; elongation factor 1-alpha E 119832794 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 119839508 HCLS1-associated protein X-1-like K16220 HAX1; HCLS1-associated protein X-1 E 119839985 arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 119829802 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 119831056 polypyrimidine tract-binding protein 2 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1 E 119839499 RNA-binding protein squid isoform X1 K03102 SQD; squid E 119837582 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 119838439 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 119838965 fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein E 119838504 cytoplasmic FMR1-interacting protein isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein E 119838262 poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 119833213 caprin homolog K18743 CAPRIN1; caprin-1 E 119834360 CUGBP Elav-like family member 2 K02177 BRU; bruno E 119836644 maternal protein exuperantia K18745 EXU; maternal protein exuperantia E 119835619 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1 E 119833247 sex-lethal homolog isoform X1 K18747 SXL; protein sex-lethal C mRNA cycle factors D Common to processing body (P body) and stress granule E 119831333 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 119834172 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C E 119829285 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 119831071 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 119838648 eukaryotic translation initiation factor 4E type 2 K03259 EIF4E; translation initiation factor 4E E 119830032 putative ATP-dependent RNA helicase Pl10 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 119834168 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 119839666 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 119828193 protein LSM14 homolog A K18749 LSM14; protein LSM14 E 119835619 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1 E 119839850 LIM domain-containing protein jub K16682 AJUBA; LIM domain-containing protein E 119828567 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 119829324 transportin-1 K18752 TNPO1; transportin-1 E 119828181 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 119839613 protein SMG5 K11125 SMG5; protein SMG5 E 119835197 uncharacterized protein LOC119835197 isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 119835285 telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 119830125 protein SMG7-like K14409 SMG7; protein SMG7 E 119831290 protein lin-28 homolog K18754 LIN28; protein lin-28 E 119831531 protein lin-28 homolog isoform X1 K18754 LIN28; protein lin-28 E 119837775 huntingtin-like K04533 HD; huntingtin E 119840155 protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C E 119836069 heterogeneous nuclear ribonucleoprotein 87F-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 119838608 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 119834143 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11] E 119831666 cAMP-dependent protein kinase catalytic subunit 1-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 119833609 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 119833610 cAMP-dependent protein kinase catalytic subunit beta-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 119838460 la-related protein 1 K18757 LARP1; la-related protein 1 E 119835335 ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 119839187 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 119830988 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 119833801 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 119838122 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 119839946 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 119838438 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 119832691 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 119836694 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 119839869 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 119837184 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 119832975 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 119836361 unconventional myosin-Va K10357 MYO5; myosin V E 119835847 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 119831095 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha E 119837661 tubulin alpha chain K07374 TUBA; tubulin alpha E 119840451 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha E 119837582 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 119838439 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 119833454 uncharacterized protein LOC119833454 isoform X1 K13133 GEMIN5; gem associated protein 5 E 119832446 protein Gawky K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 119835653 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 119829025 regulator of gene activity isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 119838688 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 119837669 uncharacterized protein LOC119837669 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 119836389 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 119833624 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 119833678 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 119840881 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 119830666 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 119835663 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 119835274 LOW QUALITY PROTEIN: protein Tob1 K14443 TOB; protein Tob/BTG E 119835401 eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 119831957 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 119830768 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4 E 119829113 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 119829648 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3 E 119830792 RING finger protein nhl-1 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 119831933 protein wech K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 119828861 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 119830013 YTH domain-containing family protein 3 isoform X1 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 119828810 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 119838584 nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 119829501 polyadenylate-binding protein 1-A K13126 PABPC; polyadenylate-binding protein E 119829802 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 119838965 fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein E 119835987 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 119830296 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A E 119832530 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 119830252 eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E 119828851 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 119838333 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 119835848 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G E 119833297 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G E 119833298 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G E 119833750 ribosomal protein S6 kinase 2 beta K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 119839921 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 119828944 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 119832765 uncharacterized protein LOC119832765 isoform X1 K14284 NXF; nuclear RNA export factor E 119832783 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 119838857 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 119833613 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3 B mRNA degradation factors C 5'-3' decay D Decapping complex E 119830988 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 119839187 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 119834168 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 119831957 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 119830768 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4 D Lsm complex E 119833801 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 119838122 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 119839946 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 119838438 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 119832691 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 119836694 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 119839869 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 119837184 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 119831333 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 119828434 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 119835975 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E 119837786 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 E 119830468 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4 E 119838699 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 119836645 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 119828480 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 119836958 exosome complex component MTR3 isoform X1 K12587 MTR3; exosome complex component MTR3 E 119829643 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 E 119833496 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 119833586 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 119833440 exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 119835537 exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 119832747 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1 E 119840366 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 119837217 non-canonical poly(A) RNA polymerase protein Trf4-1-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 119837219 non-canonical poly(A) RNA polymerase protein Trf4-1-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 119829500 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 119828512 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 119834930 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3 E 119839604 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61 E 119839679 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 119836389 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 119835653 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 119829025 regulator of gene activity isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 119838688 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 119837669 uncharacterized protein LOC119837669 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 119833624 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 119833678 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 119828997 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 119836284 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 119830666 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 119835663 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 119835250 pre-piRNA 3'-exonuclease trimmer-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 119832428 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 119840295 ATP-dependent DNA/RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 119835274 LOW QUALITY PROTEIN: protein Tob1 K14443 TOB; protein Tob/BTG E 119835975 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 119834132 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 119829813 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 119832943 protein Smaug K27396 SMG; protein Smaug E 119832029 focadhesin isoform X1 K27498 FOCAD; focadhesin C Other degradation factors D RNases E 119839959 probable ribonuclease ZC3H12B isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 119832773 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 119833794 oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 119835547 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 119830695 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 119828796 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 119829589 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 119838938 LOW QUALITY PROTEIN: heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK E 119828717 63 kDa chaperonin, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E 119839866 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 119830468 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4 E 119837786 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 D Cofactors E 119836645 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 119829643 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024