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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Ziziphus jujuba (Chinese jujube)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        107424459 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        107424327 DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        107424625 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        107426963 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        107419713 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        107416483 DNA-directed RNA polymerases IV and V subunit 4 isoform X1	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107419467 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107419738 DNA-directed RNA polymerase II subunit 4 isoform X2	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107419740 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107429558 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107410895 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        107416312 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        125419620 DNA-directed RNA polymerases II, IV and V subunit 9A isoform X2	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        107406978 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107431893 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107414426 DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107421870 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107406585 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423561 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423562 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107419711 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107426616 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        107434888 DNA-directed RNA polymerase IV subunit 1 isoform X2	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        107412907 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        107419757 DNA-directed RNA polymerases IV and V subunit 2	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        107422830 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        107422834 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        125423629 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        107411017 uncharacterized protein LOC107411017	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        107421332 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        107406202 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        107424838 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        107431640 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        107419371 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107435307 TATA-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107431378 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        107433723 transcription initiation factor TFIID subunit 4b isoform X4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107413934 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107417408 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107434325 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        125418120 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107416136 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        107418804 uncharacterized protein LOC107418804	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        107431960 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        107435950 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        107419905 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        107405067 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        107408460 transcription initiation factor TFIID subunit 12b isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107434959 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107405847 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        107426376 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        107418848 uncharacterized protein LOC107418848	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        107429959 uncharacterized protein LOC107429959	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        125423958 transcription initiation factor IIF subunit alpha isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        107413662 uncharacterized protein LOC107413662	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        107435488 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        107417688 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        125423432 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        107404633 general transcription and DNA repair factor IIH subunit TFB4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        107423855 general transcription and DNA repair factor IIH subunit TFB2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        107429869 general transcription and DNA repair factor IIH helicase subunit XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        107426444 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        107406407 general transcription and DNA repair factor IIH subunit TFB5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        107417327 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        107418746 cyclin-dependent kinase D-3 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        125418142 uncharacterized protein LOC125418142	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        107411879 cyclin-H1-1 isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        107424632 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        107404382 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        107419602 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        107420302 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        107424081 mediator of RNA polymerase II transcription subunit 20a isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        107413734 mediator of RNA polymerase II transcription subunit 22b	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        107424580 mediator of RNA polymerase II transcription subunit 22a	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        107411480 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        107432291 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        107430052 mediator of RNA polymerase II transcription subunit 10b	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        107419764 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        107414135 mediator of RNA polymerase II transcription subunit 31 isoform X1	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        107412197 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        125423721 cyclin-dependent kinase E-1 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        107426791 cyclin-C1-2	K15161 CCNC; cyclin-C 
E        107415060 mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        107429271 mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        107429514 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        107433629 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        107404939 mediator of RNA polymerase II transcription subunit 32 isoform X1	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        107423294 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        107431399 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        107425866 histone acetyltransferase GCN5 isoform X2	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        107424364 uncharacterized protein LOC107424364 isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        107415460 transcriptional adapter ADA2b isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        107433899 transcriptional adapter ADA2 isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        125422058 LOW QUALITY PROTEIN: transcriptional adapter ADA2a	K11314 TADA2A; transcriptional adapter 2-alpha 
E        107433723 transcription initiation factor TFIID subunit 4b isoform X4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107413934 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107417408 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107434325 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        125418120 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107435950 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        107419905 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        107408460 transcription initiation factor TFIID subunit 12b isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107434959 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107411498 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        107415227 SAGA-associated factor 29 homolog A isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        107406705 protein CHROMATIN REMODELING 5 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        107433987 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        107406690 ubiquitin C-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        107419944 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        107413564 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        107432303 uncharacterized protein LOC107432303 isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        107404055 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        107422033 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        107406482 SWI/SNF complex subunit SWI3A isoform X2	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        107419827 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        107418039 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        107427946 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        107417842 actin-related protein 4 isoform X2	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        107422033 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        107404875 RNA polymerase II transcriptional coactivator KIWI isoform X1	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        107429794 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        107428953 protein SHORT ROOT IN SALT MEDIUM 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        107414049 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        107434508 transcription elongation factor SPT4 homolog 1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107435987 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        107431534 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        107420599 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        107432146 uncharacterized protein LOC107432146 isoform X3	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        107414270 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        107415200 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        107412948 uncharacterized protein LOC107412948 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        107418479 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        107410912 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107411911 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107412332 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107413205 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107413213 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107422885 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107430197 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107431404 serine/threonine-protein phosphatase PP1 isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107421396 uncharacterized protein LOC107421396 isoform X1	K06100 SYMPK; symplekin 
E        107422871 uncharacterized protein LOC107422871	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        107435844 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        107430406 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        107425403 uncharacterized protein LOC107425403 isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        107428039 uncharacterized protein LOC107428039	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        107424377 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        107435349 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        107423146 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        107424131 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        107419082 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        107409101 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        107411729 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        107429361 uncharacterized protein LOC107429361 isoform X1	K15186 EAF; ELL-associated factor 
E        107404043 cyclin-T1-4	K15188 CCNT; cyclin T 
E        107423038 cyclin-T1-4 isoform X2	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        107404043 cyclin-T1-4	K15188 CCNT; cyclin T 
E        107423038 cyclin-T1-4 isoform X2	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        107431964 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        107411195 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        107415655 la-related protein 6B isoform X2	K15191 LARP7; La-related protein 7 
E        125420725 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        107404043 cyclin-T1-4	K15188 CCNT; cyclin T 
E        107423038 cyclin-T1-4 isoform X2	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        107410238 TATA-binding protein-associated factor BTAF1 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        107418942 protein Dr1 homolog isoform X1	K21751 DR1; down-regulator of transcription 1 
E        107412815 uncharacterized protein LOC107412815 isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        107432206 uncharacterized protein LOC107432206	K21752 DRAP1; Dr1-associated corepressor 
E        107424990 uncharacterized protein LOC107424990 isoform X2	K15193 SPTY2D1; protein SPT2 
E        107424816 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        107430841 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        107426942 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        107429120 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        107429706 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        107435074 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        112492015 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        107405424 uncharacterized protein LOC107405424 isoform X2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107412279 uncharacterized protein LOC107412279	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107413848 uncharacterized protein LOC107413848	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107431340 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        107427350 transcriptional elongation regulator MINIYO isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        107411648 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        107411756 uncharacterized protein LOC107411756 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        107407822 pheromone receptor transcription factor	K12412 MCM1; pheromone receptor transcription factor 
E        107413360 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        132799976 uncharacterized protein LOC132799976	K12412 MCM1; pheromone receptor transcription factor 
E        107404693 GPN-loop GTPase QQT2 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107429012 uncharacterized protein LOC107429012 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107433103 uncharacterized protein LOC107433103 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107433692 GPN-loop GTPase QQT1 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107411610 RNA-directed DNA methylation 4	K28237 SLC7A6OS; RNA polymerase II nuclear localization protein 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        107411173 DNA-directed RNA polymerase III subunit 1 isoform X1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        107404210 DNA-directed RNA polymerase III subunit 2 isoform X1	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        107433811 uncharacterized protein LOC107433811	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        107410946 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        107414510 uncharacterized protein LOC107414510 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        107414218 uncharacterized protein LOC107414218	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        107424091 DNA-directed RNA polymerase III subunit rpc4 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        107424857 uncharacterized protein LOC107424857 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        107409954 uncharacterized protein LOC107409954	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        107421502 uncharacterized protein LOC107421502 isoform X2	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        107425890 DNA-directed RNA polymerase III subunit rpc8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        107423117 uncharacterized protein LOC107423117	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        107423641 uncharacterized protein LOC107423641	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        107406978 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107431893 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107414426 DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107421870 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107406585 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423561 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423562 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107419711 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107426616 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        107405043 transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        107433017 LOW QUALITY PROTEIN: transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        132799340 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        107419371 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107435307 TATA-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107411383 plant-specific TFIIB-related protein PTF2 isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        107422065 transcription factor IIIB 60 kDa subunit isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        107426769 uncharacterized protein LOC107426769 isoform X3	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        107406981 uncharacterized protein LOC107406981 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        107434962 uncharacterized protein LOC107434962 isoform X2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        107434631 uncharacterized protein LOC107434631 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        107432442 uncharacterized protein LOC107432442	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        107434631 uncharacterized protein LOC107434631 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        107428195 uncharacterized protein LOC107428195	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        107416653 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        107429362 uncharacterized protein LOC107429362	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        107403749 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        107415198 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        107433811 uncharacterized protein LOC107433811	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        107410946 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        107435768 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        107420403 uncharacterized protein LOC107420403	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        107406978 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107431893 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107414426 DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107421870 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107406585 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423561 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107423562 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107419711 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107426616 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        107419371 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107435307 TATA-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        107424354 uncharacterized protein LOC107424354	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        107411183 protein TRI1 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
E        107424694 upstream activation factor subunit spp27 isoform X2	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        107434508 transcription elongation factor SPT4 homolog 1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107435987 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        107426915 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        27963881 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        27963826 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        27963824 rpoC2; RNA polymerase beta subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        27963825 rpoC1; RNA polymerase beta	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        107414612 RNA polymerase sigma factor SigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        107420874 LOW QUALITY PROTEIN: RNA polymerase sigma factor SigC	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        107406202 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        107424838 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        107431640 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        107418848 uncharacterized protein LOC107418848	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
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#Last updated: April 17, 2025