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Transcription Machinery - Zobellia laminariae
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E Q5W13_12550 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Sigma factors
E Q5W13_20395 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
E Q5W13_16765 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_20870 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_23165 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_03335 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_16545 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_03350 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_02375 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_16985 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Q5W13_18540 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E Q5W13_18720 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E Q5W13_11620 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E Q5W13_11740 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E Q5W13_14195 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E Q5W13_03035 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E Q5W13_20345 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D Transcription elongation factors
E Q5W13_07105 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
E Q5W13_00205 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
E Q5W13_10510 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E Q5W13_20595 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E Q5W13_13785 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024